LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SUPERFAMILY SSF55785 556 684 4.01E-15 T 23-04-2016 IPR000014 PAS domain LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 574 693 3.6E-9 T 23-04-2016 IPR000014 PAS domain LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SMART SM00388 706 773 4.5E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Pfam PF00072 Response regulator receiver domain 958 1072 4.8E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Pfam PF08448 PAS fold 577 688 1.3E-10 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Gene3D G3DSA:3.40.190.10 233 270 1.5E-14 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Gene3D G3DSA:3.40.190.10 51 141 1.5E-14 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Gene3D G3DSA:3.40.190.10 296 373 1.3E-16 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Gene3D G3DSA:3.40.190.10 477 516 1.3E-16 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 PRINTS PR00344 Bacterial sensor protein C-terminal signature 879 889 3.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 PRINTS PR00344 Bacterial sensor protein C-terminal signature 896 914 3.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 PRINTS PR00344 Bacterial sensor protein C-terminal signature 861 875 3.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 PRINTS PR00344 Bacterial sensor protein C-terminal signature 920 933 3.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Gene3D G3DSA:3.40.50.2300 954 1078 1.5E-37 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Gene3D G3DSA:1.10.287.130 701 769 2.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SMART SM00387 820 936 5.4E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Gene3D G3DSA:3.30.450.20 558 684 1.8E-15 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 301 515 4.2E-28 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 270 2.5E-20 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SUPERFAMILY SSF52172 955 1077 1.08E-33 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SUPERFAMILY SSF47384 689 774 8.63E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 PANTHER PTHR24423 9 16 2.9E-147 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 PANTHER PTHR24423 555 1089 2.9E-147 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 PANTHER PTHR24423:SF382 9 16 2.9E-147 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 PANTHER PTHR24423:SF382 555 1089 2.9E-147 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Pfam PF00512 His Kinase A (phospho-acceptor) domain 707 773 1.7E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 821 934 3.4E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SUPERFAMILY SSF53850 47 269 6.18E-32 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Gene3D G3DSA:3.30.565.10 774 936 1.2E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Gene3D G3DSA:3.40.190.10 374 454 5.7E-10 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SMART SM00062 54 273 1.0E-16 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SMART SM00062 297 517 2.2E-24 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SMART SM00448 956 1072 3.8E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SUPERFAMILY SSF55874 763 932 7.86E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SUPERFAMILY SSF53850 298 520 7.47E-38 T 23-04-2016 LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 SMART SM00091 571 636 0.0039 T 23-04-2016 IPR000014 PAS domain LT40_RS20385 b2feef3df5fadefb8bee75821b5eeec4 1090 Gene3D G3DSA:3.40.190.10 156 227 2.0E-6 T 23-04-2016 LT40_RS18445 c01ed39bd3f8f087d4bf0655ca675f97 58 PANTHER PTHR15892 1 57 1.1E-22 T 23-04-2016 LT40_RS18445 c01ed39bd3f8f087d4bf0655ca675f97 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.546 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LT40_RS18445 c01ed39bd3f8f087d4bf0655ca675f97 58 PIRSF PIRSF002211 1 58 2.6E-23 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LT40_RS18445 c01ed39bd3f8f087d4bf0655ca675f97 58 SUPERFAMILY SSF55129 1 57 1.83E-19 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LT40_RS18445 c01ed39bd3f8f087d4bf0655ca675f97 58 Gene3D G3DSA:3.30.1390.20 1 57 1.8E-25 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LT40_RS18445 c01ed39bd3f8f087d4bf0655ca675f97 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 57 1.8E-19 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LT40_RS18445 c01ed39bd3f8f087d4bf0655ca675f97 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 50 3.7E-17 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LT40_RS09700 962cc7478bfcec5fbd186df8b011a013 176 Pfam PF00210 Ferritin-like domain 38 175 6.3E-20 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LT40_RS09700 962cc7478bfcec5fbd186df8b011a013 176 PANTHER PTHR30295 14 170 8.1E-43 T 23-04-2016 LT40_RS09700 962cc7478bfcec5fbd186df8b011a013 176 PANTHER PTHR30295:SF6 14 170 8.1E-43 T 23-04-2016 LT40_RS09700 962cc7478bfcec5fbd186df8b011a013 176 Gene3D G3DSA:1.20.1260.10 29 175 1.3E-43 T 23-04-2016 IPR012347 Ferritin-related LT40_RS09700 962cc7478bfcec5fbd186df8b011a013 176 PIRSF PIRSF005900 13 176 1.3E-39 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LT40_RS09700 962cc7478bfcec5fbd186df8b011a013 176 SUPERFAMILY SSF47240 32 173 4.06E-36 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS09700 962cc7478bfcec5fbd186df8b011a013 176 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 80 96 1.1E-5 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LT40_RS09700 962cc7478bfcec5fbd186df8b011a013 176 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 56 72 1.1E-5 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LT40_RS09700 962cc7478bfcec5fbd186df8b011a013 176 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 152 170 1.1E-5 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LT40_RS19745 d3c250558fb2ddebd006fbfccf555f40 769 Gene3D G3DSA:2.40.170.20 193 769 3.0E-155 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS19745 d3c250558fb2ddebd006fbfccf555f40 769 SUPERFAMILY SSF56935 69 769 6.28E-132 T 23-04-2016 LT40_RS19745 d3c250558fb2ddebd006fbfccf555f40 769 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 176 2.5E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS19745 d3c250558fb2ddebd006fbfccf555f40 769 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 79 769 2.1E-86 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS19745 d3c250558fb2ddebd006fbfccf555f40 769 PANTHER PTHR32552 14 53 9.6E-238 T 23-04-2016 LT40_RS19745 d3c250558fb2ddebd006fbfccf555f40 769 PANTHER PTHR32552 69 769 9.6E-238 T 23-04-2016 LT40_RS19745 d3c250558fb2ddebd006fbfccf555f40 769 Pfam PF00593 TonB dependent receptor 521 766 1.5E-36 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS19745 d3c250558fb2ddebd006fbfccf555f40 769 Gene3D G3DSA:2.170.130.10 58 183 4.0E-33 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS19745 d3c250558fb2ddebd006fbfccf555f40 769 PANTHER PTHR32552:SF8 14 53 9.6E-238 T 23-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LT40_RS19745 d3c250558fb2ddebd006fbfccf555f40 769 PANTHER PTHR32552:SF8 69 769 9.6E-238 T 23-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LT40_RS04120 b58afc22d242dcc0285323b3930a83b8 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 4 296 6.5E-72 T 23-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LT40_RS04120 b58afc22d242dcc0285323b3930a83b8 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 179 294 1.5E-31 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LT40_RS04120 b58afc22d242dcc0285323b3930a83b8 303 Gene3D G3DSA:1.10.1040.10 188 295 3.1E-35 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS04120 b58afc22d242dcc0285323b3930a83b8 303 PANTHER PTHR21708 2 292 1.2E-64 T 23-04-2016 LT40_RS04120 b58afc22d242dcc0285323b3930a83b8 303 Gene3D G3DSA:3.40.50.720 4 187 8.8E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04120 b58afc22d242dcc0285323b3930a83b8 303 SUPERFAMILY SSF48179 179 296 1.5E-31 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS04120 b58afc22d242dcc0285323b3930a83b8 303 PANTHER PTHR21708:SF24 2 292 1.2E-64 T 23-04-2016 LT40_RS04120 b58afc22d242dcc0285323b3930a83b8 303 SUPERFAMILY SSF51735 4 157 1.08E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04120 b58afc22d242dcc0285323b3930a83b8 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 5 153 4.2E-32 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 LT40_RS15670 391f616a7ba2f61473727b1f48c43f23 257 Gene3D G3DSA:3.40.80.10 24 181 3.5E-55 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LT40_RS15670 391f616a7ba2f61473727b1f48c43f23 257 SMART SM00644 23 163 2.8E-37 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LT40_RS15670 391f616a7ba2f61473727b1f48c43f23 257 SUPERFAMILY SSF47090 183 255 9.02E-20 T 23-04-2016 IPR002477 Peptidoglycan binding-like LT40_RS15670 391f616a7ba2f61473727b1f48c43f23 257 Pfam PF01471 Putative peptidoglycan binding domain 198 250 2.1E-7 T 23-04-2016 IPR002477 Peptidoglycan binding-like LT40_RS15670 391f616a7ba2f61473727b1f48c43f23 257 SUPERFAMILY SSF55846 21 179 4.97E-53 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LT40_RS15670 391f616a7ba2f61473727b1f48c43f23 257 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 32 164 8.5E-24 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LT40_RS15670 391f616a7ba2f61473727b1f48c43f23 257 PANTHER PTHR30417 30 255 3.2E-79 T 23-04-2016 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 PANTHER PTHR11451 3 332 4.2E-104 T 23-04-2016 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 467 7.3E-139 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 SUPERFAMILY SSF52374 3 307 1.9E-110 T 23-04-2016 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 319 2.5E-109 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 8.7E-23 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 202 8.7E-23 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 PRINTS PR00987 Glutamyl-tRNA synthetase signature 208 216 8.7E-23 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 8.7E-23 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 8.7E-23 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 SUPERFAMILY SSF48163 313 470 5.49E-35 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 Gene3D G3DSA:1.10.10.350 372 470 1.6E-13 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 Gene3D G3DSA:3.90.800.10 68 193 1.3E-41 T 23-04-2016 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 470 30.322 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 PANTHER PTHR11451:SF41 3 332 4.2E-104 T 23-04-2016 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 Gene3D G3DSA:3.40.50.620 2 67 1.4E-45 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 Gene3D G3DSA:3.40.50.620 194 243 1.4E-45 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS05275 97da3695dde0e735a8f0e53e96b9bc2b 492 Gene3D G3DSA:1.10.1160.10 245 328 1.8E-32 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 LT40_RS13535 bce2f42826331624f655a6972d52507a 453 Pfam PF03929 PepSY-associated TM region 10 394 3.0E-62 T 23-04-2016 IPR005625 PepSY-associated TM protein LT40_RS13535 bce2f42826331624f655a6972d52507a 453 Pfam PF03413 Peptidase propeptide and YPEB domain 296 339 0.0039 T 23-04-2016 IPR025711 PepSY domain LT40_RS13535 bce2f42826331624f655a6972d52507a 453 PANTHER PTHR34219 243 444 6.4E-168 T 23-04-2016 LT40_RS13535 bce2f42826331624f655a6972d52507a 453 PANTHER PTHR34219 1 219 6.4E-168 T 23-04-2016 LT40_RS13535 bce2f42826331624f655a6972d52507a 453 PANTHER PTHR34219:SF2 243 444 6.4E-168 T 23-04-2016 LT40_RS13535 bce2f42826331624f655a6972d52507a 453 PANTHER PTHR34219:SF2 1 219 6.4E-168 T 23-04-2016 LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 SMART SM00387 30 187 3.4E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 PIRSF PIRSF002583 1 633 2.0E-214 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 630 32.453 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 PANTHER PTHR11528 2 631 0.0 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 23-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 SUPERFAMILY SSF55874 8 216 4.58E-65 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 SUPERFAMILY SSF110942 518 630 1.7E-33 T 23-04-2016 LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 Pfam PF00183 Hsp90 protein 227 629 1.4E-128 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 SUPERFAMILY SSF54211 236 491 7.36E-95 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 Gene3D G3DSA:3.30.565.10 8 243 3.7E-83 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 PANTHER PTHR11528:SF44 2 631 0.0 T 23-04-2016 LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 7.5E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 PRINTS PR00775 90kDa heat shock protein signature 8 28 1.5E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 PRINTS PR00775 90kDa heat shock protein signature 193 211 1.5E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 PRINTS PR00775 90kDa heat shock protein signature 29 51 1.5E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 PRINTS PR00775 90kDa heat shock protein signature 78 95 1.5E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 PRINTS PR00775 90kDa heat shock protein signature 175 192 1.5E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 PRINTS PR00775 90kDa heat shock protein signature 123 145 1.5E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LT40_RS05915 43bd8917e6348b057be3bb0ef49a9677 634 PRINTS PR00775 90kDa heat shock protein signature 96 113 1.5E-60 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal LT40_RS16180 f9536740288024435761d2571b358dd8 267 Pfam PF05013 N-formylglutamate amidohydrolase 15 234 3.7E-65 T 23-04-2016 IPR007709 N-formylglutamate amidohydrolase LT40_RS16180 f9536740288024435761d2571b358dd8 267 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 7 264 3.8E-105 T 23-04-2016 IPR010247 N-formylglutamate deformylase LT40_RS16180 f9536740288024435761d2571b358dd8 267 Gene3D G3DSA:3.40.630.40 6 264 5.1E-89 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LT40_RS16180 f9536740288024435761d2571b358dd8 267 SUPERFAMILY SSF53187 5 263 3.3E-77 T 23-04-2016 LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 Pfam PF04408 Helicase associated domain (HA2) 394 472 1.4E-14 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 SMART SM00490 234 334 3.8E-21 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 Gene3D G3DSA:3.40.50.300 3 164 2.7E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 Gene3D G3DSA:3.40.50.300 208 351 1.0E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 838 0.0 T 23-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 SMART SM00487 2 189 1.1E-16 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 Pfam PF08482 ATP-dependent helicase C-terminal 695 826 3.4E-52 T 23-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 Pfam PF00271 Helicase conserved C-terminal domain 208 333 3.8E-14 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 Pfam PF00270 DEAD/DEAH box helicase 16 168 1.5E-6 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 PIRSF PIRSF005496 1 840 0.0 T 23-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 PANTHER PTHR18934 3 456 3.7E-160 T 23-04-2016 LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 PANTHER PTHR18934 725 734 3.7E-160 T 23-04-2016 LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 SMART SM00847 393 485 2.2E-17 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 LT40_RS18970 d9dd8ab5f3c65af9183bb7538219a77c 840 SUPERFAMILY SSF52540 29 439 3.34E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05035 4e8ee3412f0a80161a7fef9f3d78ecf1 135 SUPERFAMILY SSF51316 5 132 2.83E-59 T 23-04-2016 IPR011057 Mss4-like LT40_RS05035 4e8ee3412f0a80161a7fef9f3d78ecf1 135 Gene3D G3DSA:2.170.150.20 4 132 1.1E-61 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 LT40_RS05035 4e8ee3412f0a80161a7fef9f3d78ecf1 135 Pfam PF01641 SelR domain 10 129 2.6E-54 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 LT40_RS05035 4e8ee3412f0a80161a7fef9f3d78ecf1 135 PANTHER PTHR10173:SF18 6 129 9.6E-56 T 23-04-2016 LT40_RS05035 4e8ee3412f0a80161a7fef9f3d78ecf1 135 PANTHER PTHR10173 6 129 9.6E-56 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 LT40_RS05035 4e8ee3412f0a80161a7fef9f3d78ecf1 135 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 37.977 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 LT40_RS05035 4e8ee3412f0a80161a7fef9f3d78ecf1 135 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 132 1.5E-57 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 LT40_RS01335 9dc26f313c1ca85b2681e9ae4c1507a1 113 Gene3D G3DSA:3.30.70.970 4 107 1.1E-7 T 23-04-2016 IPR009671 Regulator of ribonuclease activity B domain LT40_RS01335 9dc26f313c1ca85b2681e9ae4c1507a1 113 SUPERFAMILY SSF89946 4 107 1.09E-24 T 23-04-2016 IPR009671 Regulator of ribonuclease activity B domain LT40_RS01335 9dc26f313c1ca85b2681e9ae4c1507a1 113 Pfam PF06877 Regulator of ribonuclease activity B 9 104 4.7E-22 T 23-04-2016 IPR009671 Regulator of ribonuclease activity B domain LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 PANTHER PTHR19376 963 1157 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 385 1.2E-7 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 3.7E-28 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 PANTHER PTHR19376:SF32 570 943 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 PANTHER PTHR19376:SF32 963 1157 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 PANTHER PTHR19376 570 943 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 643 3.0E-29 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 SUPERFAMILY SSF64484 1133 1363 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 SUPERFAMILY SSF64484 15 944 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 PANTHER PTHR19376 4 551 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 Gene3D G3DSA:2.40.50.100 1156 1211 1.0E-5 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 PANTHER PTHR19376:SF32 4 551 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 342 3.5E-88 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1316 3.0E-78 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 PANTHER PTHR19376 1177 1262 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 PANTHER PTHR19376:SF32 1177 1262 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 SMART SM00663 235 514 4.7E-185 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1376 10.478 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 PANTHER PTHR19376 1303 1387 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 6.9E-20 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 PANTHER PTHR19376:SF32 1303 1387 0.0 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 Gene3D G3DSA:2.40.40.20 417 489 3.2E-37 T 23-04-2016 LT40_RS18325 2802e5053fc0b765328de51d5df08443 1399 Gene3D G3DSA:2.40.40.20 349 376 3.2E-37 T 23-04-2016 LT40_RS20360 2e63c33758e44808dd994ad9de1c1b06 116 PIRSF PIRSF002191 1 116 4.5E-50 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20360 2e63c33758e44808dd994ad9de1c1b06 116 PANTHER PTHR15680 1 115 5.6E-53 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20360 2e63c33758e44808dd994ad9de1c1b06 116 SUPERFAMILY SSF50104 2 115 5.62E-45 T 23-04-2016 IPR008991 Translation protein SH3-like domain LT40_RS20360 2e63c33758e44808dd994ad9de1c1b06 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 114 2.9E-49 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20360 2e63c33758e44808dd994ad9de1c1b06 116 PRINTS PR00061 Ribosomal protein L19 signature 35 64 1.1E-38 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20360 2e63c33758e44808dd994ad9de1c1b06 116 PRINTS PR00061 Ribosomal protein L19 signature 89 114 1.1E-38 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20360 2e63c33758e44808dd994ad9de1c1b06 116 PRINTS PR00061 Ribosomal protein L19 signature 5 34 1.1E-38 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20360 2e63c33758e44808dd994ad9de1c1b06 116 Pfam PF01245 Ribosomal protein L19 5 114 8.3E-49 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20360 2e63c33758e44808dd994ad9de1c1b06 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20360 2e63c33758e44808dd994ad9de1c1b06 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 29.865 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 SUPERFAMILY SSF54826 3 138 5.89E-55 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 4.0E-204 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 427 5.9E-138 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 Pfam PF03952 Enolase, N-terminal domain 4 134 4.6E-57 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 PIRSF PIRSF001400 1 428 1.8E-192 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 SUPERFAMILY SSF51604 144 427 4.72E-130 T 23-04-2016 IPR029065 Enolase C-terminal domain-like LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 SMART SM01193 4 134 5.9E-90 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 Gene3D G3DSA:3.30.390.10 3 125 2.3E-54 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 SMART SM01192 143 429 1.6E-220 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 PANTHER PTHR11902 1 429 6.4E-272 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 Hamap MF_00318 Enolase [eno]. 2 415 44.29 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 Gene3D G3DSA:3.20.20.120 128 428 1.7E-137 T 23-04-2016 IPR029065 Enolase C-terminal domain-like LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 PRINTS PR00148 Enolase signature 165 178 1.1E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 PRINTS PR00148 Enolase signature 367 384 1.1E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 PRINTS PR00148 Enolase signature 315 326 1.1E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 PRINTS PR00148 Enolase signature 37 51 1.1E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 PRINTS PR00148 Enolase signature 107 123 1.1E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS00510 e36a751865bbf6f657da932a968c7132 429 PRINTS PR00148 Enolase signature 338 352 1.1E-44 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS03450 a14589c23523a971a211e6260894de47 431 PANTHER PTHR23023 258 411 1.4E-60 T 23-04-2016 LT40_RS03450 a14589c23523a971a211e6260894de47 431 PANTHER PTHR23023 4 211 1.4E-60 T 23-04-2016 LT40_RS03450 a14589c23523a971a211e6260894de47 431 Gene3D G3DSA:3.40.50.720 176 195 9.5E-5 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS03450 a14589c23523a971a211e6260894de47 431 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.7E-7 T 23-04-2016 LT40_RS03450 a14589c23523a971a211e6260894de47 431 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.7E-7 T 23-04-2016 LT40_RS03450 a14589c23523a971a211e6260894de47 431 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 11 197 6.3E-27 T 23-04-2016 LT40_RS03450 a14589c23523a971a211e6260894de47 431 SUPERFAMILY SSF51905 6 199 5.04E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS03450 a14589c23523a971a211e6260894de47 431 PANTHER PTHR23023:SF4 258 411 1.4E-60 T 23-04-2016 LT40_RS03450 a14589c23523a971a211e6260894de47 431 PANTHER PTHR23023:SF4 4 211 1.4E-60 T 23-04-2016 LT40_RS03450 a14589c23523a971a211e6260894de47 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 5.7E-5 T 23-04-2016 LT40_RS03450 a14589c23523a971a211e6260894de47 431 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 5.7E-5 T 23-04-2016 LT40_RS03450 a14589c23523a971a211e6260894de47 431 Gene3D G3DSA:3.50.50.60 2 175 6.8E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS03450 a14589c23523a971a211e6260894de47 431 Gene3D G3DSA:3.50.50.60 373 416 6.8E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS03450 a14589c23523a971a211e6260894de47 431 SUPERFAMILY SSF51905 170 408 9.26E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10380 b53d9e9def09156ceb1f93ab83ce6415 551 Gene3D G3DSA:2.30.38.10 364 438 9.4E-10 T 23-04-2016 LT40_RS10380 b53d9e9def09156ceb1f93ab83ce6415 551 Gene3D G3DSA:3.40.50.980 48 199 1.9E-31 T 23-04-2016 LT40_RS10380 b53d9e9def09156ceb1f93ab83ce6415 551 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 532 6.6E-26 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LT40_RS10380 b53d9e9def09156ceb1f93ab83ce6415 551 Gene3D G3DSA:3.30.300.30 440 541 1.1E-30 T 23-04-2016 LT40_RS10380 b53d9e9def09156ceb1f93ab83ce6415 551 SUPERFAMILY SSF56801 26 544 1.44E-132 T 23-04-2016 LT40_RS10380 b53d9e9def09156ceb1f93ab83ce6415 551 ProSitePatterns PS00455 Putative AMP-binding domain signature. 196 207 - T 23-04-2016 IPR020845 AMP-binding, conserved site LT40_RS10380 b53d9e9def09156ceb1f93ab83ce6415 551 PANTHER PTHR24095 26 545 1.4E-159 T 23-04-2016 LT40_RS10380 b53d9e9def09156ceb1f93ab83ce6415 551 Pfam PF00501 AMP-binding enzyme 42 445 1.1E-67 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LT40_RS10380 b53d9e9def09156ceb1f93ab83ce6415 551 Gene3D G3DSA:3.40.50.980 200 352 4.5E-23 T 23-04-2016 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Gene3D G3DSA:3.30.450.20 136 267 1.7E-22 T 23-04-2016 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Gene3D G3DSA:3.30.450.20 268 388 4.8E-19 T 23-04-2016 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SMART SM00091 282 348 0.59 T 23-04-2016 IPR000014 PAS domain LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SMART SM00091 141 210 7.7 T 23-04-2016 IPR000014 PAS domain LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SMART SM00448 680 786 9.5E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SMART SM00448 6 118 4.4E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SUPERFAMILY SSF55874 484 655 2.62E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 537 654 1.3E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SUPERFAMILY SSF55785 293 392 2.09E-17 T 23-04-2016 IPR000014 PAS domain LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SMART SM00388 426 494 2.0E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Gene3D G3DSA:3.30.565.10 480 655 1.1E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SUPERFAMILY SSF55785 150 262 8.86E-16 T 23-04-2016 IPR000014 PAS domain LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SMART SM00086 218 259 0.0044 T 23-04-2016 IPR001610 PAC motif LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SMART SM00086 354 390 5.7 T 23-04-2016 IPR001610 PAC motif LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SUPERFAMILY SSF52172 4 153 2.85E-21 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SUPERFAMILY SSF52172 678 790 3.13E-27 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SMART SM00387 535 657 1.5E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 PANTHER PTHR24423 410 790 7.8E-166 T 23-04-2016 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 PANTHER PTHR24423 118 388 7.8E-166 T 23-04-2016 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Gene3D G3DSA:3.40.50.2300 5 135 3.0E-17 T 23-04-2016 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Pfam PF00072 Response regulator receiver domain 9 112 1.1E-9 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Pfam PF00072 Response regulator receiver domain 682 786 3.2E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 SUPERFAMILY SSF47384 416 491 2.16E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 PANTHER PTHR24423:SF438 410 790 7.8E-166 T 23-04-2016 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 PANTHER PTHR24423:SF438 118 388 7.8E-166 T 23-04-2016 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 635 4.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 600 4.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 641 654 4.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 614 4.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Gene3D G3DSA:1.10.287.130 422 479 3.2E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Pfam PF08447 PAS fold 305 375 1.2E-12 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Pfam PF08447 PAS fold 167 253 2.0E-12 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Gene3D G3DSA:3.40.50.2300 678 790 3.0E-28 T 23-04-2016 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 Pfam PF00512 His Kinase A (phospho-acceptor) domain 427 492 1.1E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 191 266 3.7E-6 T 23-04-2016 IPR000014 PAS domain LT40_RS10885 d18edcc3315c55f4905968df41eb1567 792 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 301 392 7.0E-11 T 23-04-2016 IPR000014 PAS domain LT40_RS20485 abadeaf3311b053db5fbb053e19aecd1 248 Gene3D G3DSA:1.10.357.10 48 247 2.5E-31 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS20485 abadeaf3311b053db5fbb053e19aecd1 248 PANTHER PTHR30055:SF2 36 248 7.3E-23 T 23-04-2016 LT40_RS20485 abadeaf3311b053db5fbb053e19aecd1 248 SUPERFAMILY SSF46689 42 121 1.23E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS20485 abadeaf3311b053db5fbb053e19aecd1 248 PANTHER PTHR30055 36 248 7.3E-23 T 23-04-2016 LT40_RS20485 abadeaf3311b053db5fbb053e19aecd1 248 Pfam PF00440 Bacterial regulatory proteins, tetR family 52 97 8.4E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS05355 8d84c60806b9504de910355811322c39 307 SUPERFAMILY SSF103088 158 277 2.49E-27 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS05355 8d84c60806b9504de910355811322c39 307 Gene3D G3DSA:3.30.1330.60 183 278 3.4E-27 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS05355 8d84c60806b9504de910355811322c39 307 Pfam PF00691 OmpA family 183 272 5.0E-17 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS05355 8d84c60806b9504de910355811322c39 307 PRINTS PR01021 OMPA domain signature 223 239 2.1E-5 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS05355 8d84c60806b9504de910355811322c39 307 PRINTS PR01021 OMPA domain signature 208 223 2.1E-5 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS05355 8d84c60806b9504de910355811322c39 307 PANTHER PTHR30128 188 285 9.0E-29 T 23-04-2016 LT40_RS05355 8d84c60806b9504de910355811322c39 307 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 77 95 2.5E-14 T 23-04-2016 LT40_RS05355 8d84c60806b9504de910355811322c39 307 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 241 260 2.5E-14 T 23-04-2016 LT40_RS05355 8d84c60806b9504de910355811322c39 307 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 261 281 2.5E-14 T 23-04-2016 LT40_RS05355 8d84c60806b9504de910355811322c39 307 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 139 158 2.5E-14 T 23-04-2016 LT40_RS05355 8d84c60806b9504de910355811322c39 307 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 223 240 2.5E-14 T 23-04-2016 LT40_RS05355 8d84c60806b9504de910355811322c39 307 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 39 57 2.5E-14 T 23-04-2016 LT40_RS01600 f7ea62ba1a3251d0a5ed6b4a088b4fea 374 PANTHER PTHR30483 7 371 1.5E-102 T 23-04-2016 LT40_RS01600 f7ea62ba1a3251d0a5ed6b4a088b4fea 374 PANTHER PTHR30483:SF8 7 371 1.5E-102 T 23-04-2016 LT40_RS01600 f7ea62ba1a3251d0a5ed6b4a088b4fea 374 Gene3D G3DSA:3.40.50.2300 121 304 2.7E-59 T 23-04-2016 LT40_RS01600 f7ea62ba1a3251d0a5ed6b4a088b4fea 374 Pfam PF13433 Periplasmic binding protein domain 7 366 2.1E-120 T 23-04-2016 LT40_RS01600 f7ea62ba1a3251d0a5ed6b4a088b4fea 374 SUPERFAMILY SSF53822 7 366 1.21E-83 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS08725 635314cbc79941b28120d5fa2af3744c 285 PANTHER PTHR10381 26 193 9.8E-54 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LT40_RS08725 635314cbc79941b28120d5fa2af3744c 285 Pfam PF00574 Clp protease 65 195 1.7E-26 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LT40_RS08725 635314cbc79941b28120d5fa2af3744c 285 Gene3D G3DSA:3.90.226.10 34 204 2.5E-39 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS08725 635314cbc79941b28120d5fa2af3744c 285 PANTHER PTHR10381:SF23 26 193 9.8E-54 T 23-04-2016 LT40_RS08725 635314cbc79941b28120d5fa2af3744c 285 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 3.5E-12 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LT40_RS08725 635314cbc79941b28120d5fa2af3744c 285 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 3.5E-12 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LT40_RS08725 635314cbc79941b28120d5fa2af3744c 285 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 3.5E-12 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LT40_RS08725 635314cbc79941b28120d5fa2af3744c 285 SUPERFAMILY SSF52096 35 199 1.27E-40 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS08725 635314cbc79941b28120d5fa2af3744c 285 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 23-04-2016 IPR018215 ClpP, Ser active site LT40_RS05640 c33e84b08ea223160f78c52554d7bd38 354 Gene3D G3DSA:3.40.190.10 1 134 4.4E-21 T 23-04-2016 LT40_RS05640 c33e84b08ea223160f78c52554d7bd38 354 Gene3D G3DSA:3.40.190.10 277 307 4.4E-21 T 23-04-2016 LT40_RS05640 c33e84b08ea223160f78c52554d7bd38 354 PANTHER PTHR30006:SF10 1 354 3.6E-99 T 23-04-2016 LT40_RS05640 c33e84b08ea223160f78c52554d7bd38 354 SUPERFAMILY SSF53850 47 347 2.65E-44 T 23-04-2016 LT40_RS05640 c33e84b08ea223160f78c52554d7bd38 354 Pfam PF13343 Bacterial extracellular solute-binding protein 87 335 5.0E-48 T 23-04-2016 LT40_RS05640 c33e84b08ea223160f78c52554d7bd38 354 PANTHER PTHR30006 1 354 3.6E-99 T 23-04-2016 LT40_RS05640 c33e84b08ea223160f78c52554d7bd38 354 Gene3D G3DSA:3.40.190.10 139 276 1.1E-24 T 23-04-2016 LT40_RS18525 b6d6fc9133530421103fb646d5b133cf 232 Pfam PF03922 OmpW family 24 232 3.2E-65 T 23-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 LT40_RS18525 b6d6fc9133530421103fb646d5b133cf 232 PANTHER PTHR36920 1 232 9.2E-74 T 23-04-2016 LT40_RS18525 b6d6fc9133530421103fb646d5b133cf 232 Gene3D G3DSA:2.40.160.20 23 232 5.2E-63 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LT40_RS18525 b6d6fc9133530421103fb646d5b133cf 232 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 224 232 - T 23-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 LT40_RS18525 b6d6fc9133530421103fb646d5b133cf 232 SUPERFAMILY SSF56925 24 232 8.89E-28 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LT40_RS18525 b6d6fc9133530421103fb646d5b133cf 232 PANTHER PTHR36920:SF1 1 232 9.2E-74 T 23-04-2016 LT40_RS07990 aff5d4ef2c0eec271533aafbe183121c 323 PANTHER PTHR30011 9 302 6.5E-55 T 23-04-2016 LT40_RS07990 aff5d4ef2c0eec271533aafbe183121c 323 Gene3D G3DSA:3.20.20.30 16 320 5.5E-53 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS07990 aff5d4ef2c0eec271533aafbe183121c 323 Pfam PF00296 Luciferase-like monooxygenase 41 246 2.1E-32 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS07990 aff5d4ef2c0eec271533aafbe183121c 323 PANTHER PTHR30011:SF14 9 302 6.5E-55 T 23-04-2016 LT40_RS07990 aff5d4ef2c0eec271533aafbe183121c 323 SUPERFAMILY SSF51679 25 320 8.1E-50 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS07990 aff5d4ef2c0eec271533aafbe183121c 323 TIGRFAM TIGR03571 lucif_BA3436: luciferase-type oxidoreductase, BA3436 family 18 320 8.5E-109 T 23-04-2016 IPR020020 Luciferase-type oxidoreductase LT40_RS05840 131ddb8c166a55348825cc0993bb53f8 285 Gene3D G3DSA:3.40.50.10490 70 280 2.1E-21 T 23-04-2016 LT40_RS05840 131ddb8c166a55348825cc0993bb53f8 285 PANTHER PTHR30514:SF3 1 265 1.5E-45 T 23-04-2016 LT40_RS05840 131ddb8c166a55348825cc0993bb53f8 285 Pfam PF01380 SIS domain 141 266 6.4E-18 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LT40_RS05840 131ddb8c166a55348825cc0993bb53f8 285 Gene3D G3DSA:1.10.10.10 9 69 1.4E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05840 131ddb8c166a55348825cc0993bb53f8 285 SUPERFAMILY SSF53697 122 267 5.06E-23 T 23-04-2016 LT40_RS05840 131ddb8c166a55348825cc0993bb53f8 285 SUPERFAMILY SSF46689 12 81 1.68E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS05840 131ddb8c166a55348825cc0993bb53f8 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 13 74 7.4E-8 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LT40_RS05840 131ddb8c166a55348825cc0993bb53f8 285 PANTHER PTHR30514 1 265 1.5E-45 T 23-04-2016 LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 Pfam PF07660 Secretin and TonB N terminus short domain 308 354 6.0E-8 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 PRINTS PR00811 Bacterial general secretion pathway protein D signature 531 555 5.8E-19 T 23-04-2016 IPR001775 GspD/PilQ family LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 PRINTS PR00811 Bacterial general secretion pathway protein D signature 656 674 5.8E-19 T 23-04-2016 IPR001775 GspD/PilQ family LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 PRINTS PR00811 Bacterial general secretion pathway protein D signature 447 457 5.8E-19 T 23-04-2016 IPR001775 GspD/PilQ family LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 PRINTS PR00811 Bacterial general secretion pathway protein D signature 679 693 5.8E-19 T 23-04-2016 IPR001775 GspD/PilQ family LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 PRINTS PR00811 Bacterial general secretion pathway protein D signature 566 576 5.8E-19 T 23-04-2016 IPR001775 GspD/PilQ family LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 PANTHER PTHR30604 1 700 1.0E-122 T 23-04-2016 LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 637 670 - T 23-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 282 692 4.0E-162 T 23-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 Pfam PF03958 Bacterial type II/III secretion system short domain 383 447 2.3E-12 T 23-04-2016 IPR005644 NolW-like LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 SMART SM00965 307 355 1.6E-9 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 Pfam PF11741 AMIN domain 38 121 9.1E-6 T 23-04-2016 IPR021731 AMIN domain LT40_RS14215 bf04cdfc94307cd1d369a9386fce7c5d 700 Pfam PF00263 Bacterial type II and III secretion system protein 535 691 3.8E-49 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 LT40_RS13465 84981df8f30a5f9677a934e50954f09f 337 Gene3D G3DSA:3.20.20.70 10 247 2.2E-83 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS13465 84981df8f30a5f9677a934e50954f09f 337 PIRSF PIRSF006621 3 327 3.1E-105 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS13465 84981df8f30a5f9677a934e50954f09f 337 SUPERFAMILY SSF51395 13 322 2.2E-90 T 23-04-2016 LT40_RS13465 84981df8f30a5f9677a934e50954f09f 337 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 97 115 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS13465 84981df8f30a5f9677a934e50954f09f 337 Gene3D G3DSA:1.10.1200.80 255 322 4.6E-19 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 LT40_RS13465 84981df8f30a5f9677a934e50954f09f 337 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 4 324 50.851 T 23-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 LT40_RS13465 84981df8f30a5f9677a934e50954f09f 337 PANTHER PTHR11082 5 322 8.1E-143 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS13465 84981df8f30a5f9677a934e50954f09f 337 PANTHER PTHR11082:SF25 5 322 8.1E-143 T 23-04-2016 LT40_RS13465 84981df8f30a5f9677a934e50954f09f 337 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 6 321 9.4E-128 T 23-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 LT40_RS13465 84981df8f30a5f9677a934e50954f09f 337 Pfam PF01207 Dihydrouridine synthase (Dus) 16 318 1.3E-108 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS08620 25f8351743c4725a96e8598e2e3381ac 271 Pfam PF10065 Uncharacterized conserved protein (DUF2303) 7 268 3.2E-70 T 23-04-2016 IPR019276 Protein of unkown function DUF2303 LT40_RS18980 7589c306ae0335144d9baa7f349ddaf7 358 SUPERFAMILY SSF52540 16 252 3.84E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18980 7589c306ae0335144d9baa7f349ddaf7 358 SUPERFAMILY SSF50331 248 357 3.29E-5 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS18980 7589c306ae0335144d9baa7f349ddaf7 358 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS18980 7589c306ae0335144d9baa7f349ddaf7 358 Gene3D G3DSA:3.40.50.300 17 246 8.0E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18980 7589c306ae0335144d9baa7f349ddaf7 358 SMART SM00382 40 221 3.1E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS18980 7589c306ae0335144d9baa7f349ddaf7 358 TIGRFAM TIGR03265 PhnT2: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein 15 357 7.1E-150 T 23-04-2016 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 GO:0005524 LT40_RS18980 7589c306ae0335144d9baa7f349ddaf7 358 PANTHER PTHR24220 17 256 8.4E-112 T 23-04-2016 LT40_RS18980 7589c306ae0335144d9baa7f349ddaf7 358 PANTHER PTHR24220:SF123 17 256 8.4E-112 T 23-04-2016 LT40_RS18980 7589c306ae0335144d9baa7f349ddaf7 358 Pfam PF00005 ABC transporter 31 171 3.2E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 167 2.1E-48 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 PANTHER PTHR10133 1 920 0.0 T 23-04-2016 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 270 5.1E-28 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 SMART SM00279 170 205 1.0E-12 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 Gene3D G3DSA:3.30.70.370 812 921 1.4E-68 T 23-04-2016 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 Gene3D G3DSA:3.30.70.370 657 704 1.4E-68 T 23-04-2016 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 Pfam PF00476 DNA polymerase family A 547 919 7.0E-151 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 Gene3D G3DSA:1.10.150.20 705 811 7.3E-35 T 23-04-2016 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 SUPERFAMILY SSF53098 313 509 5.48E-54 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 TIGRFAM TIGR00593 pola: DNA polymerase I 6 921 8.7E-278 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 Pfam PF01612 3'-5' exonuclease 314 508 3.2E-38 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 SUPERFAMILY SSF56672 514 921 4.89E-155 T 23-04-2016 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 ProSitePatterns PS00447 DNA polymerase family A signature. 747 766 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 SUPERFAMILY SSF47807 168 289 5.83E-30 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 Gene3D G3DSA:3.30.420.10 312 534 6.2E-84 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 PANTHER PTHR10133:SF27 1 920 0.0 T 23-04-2016 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 Gene3D G3DSA:1.10.150.20 183 251 8.7E-24 T 23-04-2016 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 772 6.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 716 6.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 6.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 854 6.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 6.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 670 6.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 723 736 6.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 868 881 6.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 PRINTS PR00868 DNA-polymerase family A (pol I) signature 671 686 6.4E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 Gene3D G3DSA:1.20.1060.10 535 656 1.0E-33 T 23-04-2016 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 SMART SM00482 679 885 6.8E-113 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 SMART SM00475 4 266 4.4E-109 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 SUPERFAMILY SSF88723 5 167 1.6E-51 T 23-04-2016 IPR029060 PIN domain-like LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 Gene3D G3DSA:3.40.50.1010 5 182 9.6E-66 T 23-04-2016 IPR029060 PIN domain-like LT40_RS15695 ea6a8588ea37a2cd90dd59148ff10c67 921 SMART SM00474 314 509 5.7E-36 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 PRINTS PR00149 Fumarate lyase superfamily signature 128 146 1.9E-27 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 PRINTS PR00149 Fumarate lyase superfamily signature 174 192 1.9E-27 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 PRINTS PR00149 Fumarate lyase superfamily signature 311 327 1.9E-27 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 PRINTS PR00149 Fumarate lyase superfamily signature 265 292 1.9E-27 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 Pfam PF10415 Fumarase C C-terminus 402 454 9.9E-21 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 Gene3D G3DSA:1.10.275.10 3 132 9.1E-51 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 327 3.0E-6 T 23-04-2016 LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 PRINTS PR00145 Argininosuccinate lyase family signature 169 189 3.0E-6 T 23-04-2016 LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 PRINTS PR00145 Argininosuccinate lyase family signature 127 149 3.0E-6 T 23-04-2016 LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 ProSitePatterns PS00163 Fumarate lyases signature. 311 320 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 Gene3D G3DSA:1.10.40.30 412 457 1.3E-21 T 23-04-2016 LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 SUPERFAMILY SSF48557 5 452 5.03E-134 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 456 75.062 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 Pfam PF00206 Lyase 12 336 4.4E-95 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 PANTHER PTHR11444:SF22 3 455 5.3E-272 T 23-04-2016 LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 PANTHER PTHR11444 3 455 5.3E-272 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS03750 a8e32a85f0c3c0f9745a718004a3f322 458 Gene3D G3DSA:1.20.200.10 133 411 1.4E-82 T 23-04-2016 LT40_RS15930 321a8b74a947ea3899491c6fad565e3a 274 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 191 2.7E-10 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LT40_RS15930 321a8b74a947ea3899491c6fad565e3a 274 Gene3D G3DSA:3.40.50.720 107 245 1.5E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15930 321a8b74a947ea3899491c6fad565e3a 274 PANTHER PTHR21089 1 272 8.5E-132 T 23-04-2016 LT40_RS15930 321a8b74a947ea3899491c6fad565e3a 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 271 2.4E-74 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS15930 321a8b74a947ea3899491c6fad565e3a 274 SUPERFAMILY SSF51735 101 268 1.08E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15930 321a8b74a947ea3899491c6fad565e3a 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 270 30.251 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS15930 321a8b74a947ea3899491c6fad565e3a 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 86 3.0E-20 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS15930 321a8b74a947ea3899491c6fad565e3a 274 PANTHER PTHR21089:SF2 1 272 8.5E-132 T 23-04-2016 LT40_RS15930 321a8b74a947ea3899491c6fad565e3a 274 Gene3D G3DSA:3.40.192.10 2 106 3.2E-31 T 23-04-2016 LT40_RS15930 321a8b74a947ea3899491c6fad565e3a 274 SUPERFAMILY SSF53223 2 100 2.76E-26 T 23-04-2016 LT40_RS10925 181981763dbd4abd197b61a372eb1a05 479 Pfam PF02321 Outer membrane efflux protein 72 264 2.7E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS10925 181981763dbd4abd197b61a372eb1a05 479 Pfam PF02321 Outer membrane efflux protein 288 471 8.2E-32 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS10925 181981763dbd4abd197b61a372eb1a05 479 Gene3D G3DSA:2.20.200.10 107 151 1.5E-15 T 23-04-2016 LT40_RS10925 181981763dbd4abd197b61a372eb1a05 479 Gene3D G3DSA:2.20.200.10 323 357 1.5E-15 T 23-04-2016 LT40_RS10925 181981763dbd4abd197b61a372eb1a05 479 PANTHER PTHR30203 1 476 2.5E-179 T 23-04-2016 LT40_RS10925 181981763dbd4abd197b61a372eb1a05 479 SUPERFAMILY SSF56954 8 476 3.14E-111 T 23-04-2016 LT40_RS10925 181981763dbd4abd197b61a372eb1a05 479 Gene3D G3DSA:1.20.1600.10 152 322 4.1E-96 T 23-04-2016 LT40_RS10925 181981763dbd4abd197b61a372eb1a05 479 Gene3D G3DSA:1.20.1600.10 360 474 4.1E-96 T 23-04-2016 LT40_RS10925 181981763dbd4abd197b61a372eb1a05 479 Gene3D G3DSA:1.20.1600.10 60 97 4.1E-96 T 23-04-2016 LT40_RS10925 181981763dbd4abd197b61a372eb1a05 479 PANTHER PTHR30203:SF7 1 476 2.5E-179 T 23-04-2016 LT40_RS10925 181981763dbd4abd197b61a372eb1a05 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 17 473 8.4E-127 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LT40_RS10550 c4888a5371822fcf9b25fc3864cf339e 273 PANTHER PTHR30465 11 266 1.1E-68 T 23-04-2016 LT40_RS10550 c4888a5371822fcf9b25fc3864cf339e 273 PANTHER PTHR30465:SF10 11 266 1.1E-68 T 23-04-2016 LT40_RS10550 c4888a5371822fcf9b25fc3864cf339e 273 Gene3D G3DSA:1.10.3720.10 61 259 6.5E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10550 c4888a5371822fcf9b25fc3864cf339e 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 259 5.3E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10550 c4888a5371822fcf9b25fc3864cf339e 273 SUPERFAMILY SSF161098 62 249 2.75E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17395 74ea0d500a24b96ce81568e435582a32 461 Pfam PF03880 DbpA RNA binding domain 389 459 6.6E-26 T 23-04-2016 IPR005580 DbpA, RNA-binding domain LT40_RS17395 74ea0d500a24b96ce81568e435582a32 461 SMART SM00487 25 222 7.5E-58 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS17395 74ea0d500a24b96ce81568e435582a32 461 PANTHER PTHR24031 1 461 5.7E-254 T 23-04-2016 LT40_RS17395 74ea0d500a24b96ce81568e435582a32 461 Gene3D G3DSA:3.40.50.300 5 210 8.2E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17395 74ea0d500a24b96ce81568e435582a32 461 Pfam PF00270 DEAD/DEAH box helicase 30 195 9.5E-46 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS17395 74ea0d500a24b96ce81568e435582a32 461 Pfam PF00271 Helicase conserved C-terminal domain 243 339 9.9E-24 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS17395 74ea0d500a24b96ce81568e435582a32 461 SMART SM00490 258 339 2.6E-27 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS17395 74ea0d500a24b96ce81568e435582a32 461 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LT40_RS17395 74ea0d500a24b96ce81568e435582a32 461 PANTHER PTHR24031:SF180 1 461 5.7E-254 T 23-04-2016 LT40_RS17395 74ea0d500a24b96ce81568e435582a32 461 SUPERFAMILY SSF52540 74 360 3.22E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17395 74ea0d500a24b96ce81568e435582a32 461 Gene3D G3DSA:3.40.50.300 217 371 4.8E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07450 b3456a907f0c3ca6d87953688424448b 514 SUPERFAMILY SSF52540 270 483 1.28E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07450 b3456a907f0c3ca6d87953688424448b 514 Gene3D G3DSA:3.40.50.300 270 489 6.4E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07450 b3456a907f0c3ca6d87953688424448b 514 Gene3D G3DSA:3.40.50.300 3 231 1.0E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07450 b3456a907f0c3ca6d87953688424448b 514 SUPERFAMILY SSF52540 6 228 1.17E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07450 b3456a907f0c3ca6d87953688424448b 514 PANTHER PTHR24220 8 381 1.7E-156 T 23-04-2016 LT40_RS07450 b3456a907f0c3ca6d87953688424448b 514 PANTHER PTHR24220:SF308 8 381 1.7E-156 T 23-04-2016 LT40_RS07450 b3456a907f0c3ca6d87953688424448b 514 Pfam PF00005 ABC transporter 270 426 2.9E-16 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS07450 b3456a907f0c3ca6d87953688424448b 514 Pfam PF00005 ABC transporter 23 171 9.2E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS07450 b3456a907f0c3ca6d87953688424448b 514 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS07450 b3456a907f0c3ca6d87953688424448b 514 SMART SM00382 279 474 0.0035 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS07450 b3456a907f0c3ca6d87953688424448b 514 SMART SM00382 30 219 2.4E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS14350 25a218422032fa9f4630a4fa3cc3d163 244 PANTHER PTHR24220:SF474 3 244 6.2E-139 T 23-04-2016 LT40_RS14350 25a218422032fa9f4630a4fa3cc3d163 244 PIRSF PIRSF039085 1 244 1.6E-105 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS14350 25a218422032fa9f4630a4fa3cc3d163 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS14350 25a218422032fa9f4630a4fa3cc3d163 244 PANTHER PTHR24220 3 244 6.2E-139 T 23-04-2016 LT40_RS14350 25a218422032fa9f4630a4fa3cc3d163 244 SMART SM00382 30 217 1.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS14350 25a218422032fa9f4630a4fa3cc3d163 244 Pfam PF00005 ABC transporter 22 169 8.2E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS14350 25a218422032fa9f4630a4fa3cc3d163 244 Gene3D G3DSA:3.40.50.300 1 240 1.5E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14350 25a218422032fa9f4630a4fa3cc3d163 244 SUPERFAMILY SSF52540 1 239 4.94E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19235 d1604ec7c7d69ad4732fa8f44ac163ca 283 Gene3D G3DSA:3.40.192.10 3 114 5.7E-33 T 23-04-2016 LT40_RS19235 d1604ec7c7d69ad4732fa8f44ac163ca 283 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 97 1.0E-20 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS19235 d1604ec7c7d69ad4732fa8f44ac163ca 283 SUPERFAMILY SSF53223 6 109 3.74E-26 T 23-04-2016 LT40_RS19235 d1604ec7c7d69ad4732fa8f44ac163ca 283 PANTHER PTHR21089 1 274 6.6E-60 T 23-04-2016 LT40_RS19235 d1604ec7c7d69ad4732fa8f44ac163ca 283 SUPERFAMILY SSF51735 110 280 1.1E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19235 d1604ec7c7d69ad4732fa8f44ac163ca 283 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 280 27.322 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS19235 d1604ec7c7d69ad4732fa8f44ac163ca 283 Gene3D G3DSA:3.40.50.720 115 280 2.0E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19235 d1604ec7c7d69ad4732fa8f44ac163ca 283 PANTHER PTHR21089:SF1 1 274 6.6E-60 T 23-04-2016 LT40_RS13320 0018e865eb549602f4a35fe9a74213df 65 Pfam PF00403 Heavy-metal-associated domain 4 60 1.5E-11 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LT40_RS13320 0018e865eb549602f4a35fe9a74213df 65 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 LT40_RS13320 0018e865eb549602f4a35fe9a74213df 65 Gene3D G3DSA:3.30.70.100 2 63 4.0E-20 T 23-04-2016 LT40_RS13320 0018e865eb549602f4a35fe9a74213df 65 SUPERFAMILY SSF55008 3 63 1.26E-15 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 SUPERFAMILY SSF47781 410 601 3.71E-51 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 PANTHER PTHR23389:SF9 1 551 7.9E-200 T 23-04-2016 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 SUPERFAMILY SSF47781 610 694 7.04E-10 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 10 607 2.0E-223 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Gene3D G3DSA:3.40.50.10190 704 778 8.2E-25 T 23-04-2016 IPR001357 BRCT domain LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 703 775 1.0E-12 T 23-04-2016 IPR001357 BRCT domain LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Gene3D G3DSA:2.40.50.140 326 397 1.1E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 PANTHER PTHR23389 1 551 7.9E-200 T 23-04-2016 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Gene3D G3DSA:3.30.470.30 126 258 6.7E-51 T 23-04-2016 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Gene3D G3DSA:1.10.287.610 5 66 8.3E-29 T 23-04-2016 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 SUPERFAMILY SSF56091 5 322 5.94E-118 T 23-04-2016 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 SMART SM00292 703 780 1.2E-8 T 23-04-2016 IPR001357 BRCT domain LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 SMART SM00532 2 466 4.2E-254 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 337 352 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 SUPERFAMILY SSF50249 325 406 1.25E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Hamap MF_01588 DNA ligase [ligA]. 1 777 52.295 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 SMART SM00278 464 483 3.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 SMART SM00278 530 549 140.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 SMART SM00278 498 517 760.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 328 404 1.6E-34 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Gene3D G3DSA:1.10.150.20 453 521 3.4E-28 T 23-04-2016 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 413 452 4.3E-11 T 23-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 323 1.8E-128 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 SUPERFAMILY SSF52113 704 777 6.38E-18 T 23-04-2016 IPR001357 BRCT domain LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 122 151 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Gene3D G3DSA:1.10.150.20 522 603 1.7E-25 T 23-04-2016 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Gene3D G3DSA:1.10.150.20 614 695 4.6E-13 T 23-04-2016 LT40_RS08995 d69fb200fc4298dc900527af2545f22e 780 Pfam PF12826 Helix-hairpin-helix motif 528 591 2.4E-19 T 23-04-2016 LT40_RS16865 c4e1bb744997d7d20c4186e341477324 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 108 3.0E-38 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LT40_RS16865 c4e1bb744997d7d20c4186e341477324 109 SUPERFAMILY SSF52833 6 107 2.76E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS16865 c4e1bb744997d7d20c4186e341477324 109 PANTHER PTHR10438 1 109 2.9E-39 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LT40_RS16865 c4e1bb744997d7d20c4186e341477324 109 PIRSF PIRSF000077 3 109 1.6E-44 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LT40_RS16865 c4e1bb744997d7d20c4186e341477324 109 PRINTS PR00421 Thioredoxin family signature 73 84 6.3E-10 T 23-04-2016 LT40_RS16865 c4e1bb744997d7d20c4186e341477324 109 PRINTS PR00421 Thioredoxin family signature 33 42 6.3E-10 T 23-04-2016 LT40_RS16865 c4e1bb744997d7d20c4186e341477324 109 PRINTS PR00421 Thioredoxin family signature 25 33 6.3E-10 T 23-04-2016 LT40_RS16865 c4e1bb744997d7d20c4186e341477324 109 Pfam PF00085 Thioredoxin 6 107 6.7E-35 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 LT40_RS16865 c4e1bb744997d7d20c4186e341477324 109 Gene3D G3DSA:3.40.30.10 3 108 1.7E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS16865 c4e1bb744997d7d20c4186e341477324 109 ProSitePatterns PS00194 Thioredoxin family active site. 26 44 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 16 800 0.0 T 23-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 SUPERFAMILY SSF50998 165 538 1.22E-151 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 SUPERFAMILY SSF50998 573 800 1.22E-151 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 Pfam PF01011 PQQ enzyme repeat 460 485 6.9E-5 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 SMART SM00564 299 331 69.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 SMART SM00564 356 397 5.7 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 SMART SM00564 425 475 0.91 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 SMART SM00564 724 755 13.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 SMART SM00564 223 254 2.0E-5 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 PANTHER PTHR32303 132 269 1.6E-267 T 23-04-2016 LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 PANTHER PTHR32303 290 524 1.6E-267 T 23-04-2016 LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 PANTHER PTHR32303 592 801 1.6E-267 T 23-04-2016 LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 Gene3D G3DSA:2.140.10.10 584 801 3.0E-161 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 Gene3D G3DSA:2.140.10.10 163 550 3.0E-161 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 Pfam PF13360 PQQ-like domain 681 771 6.6E-5 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 Pfam PF13360 PQQ-like domain 221 407 2.6E-10 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 PANTHER PTHR32303:SF4 132 269 1.6E-267 T 23-04-2016 LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 PANTHER PTHR32303:SF4 290 524 1.6E-267 T 23-04-2016 LT40_RS00110 1038e211bd63d6e8352c3241254cb631 803 PANTHER PTHR32303:SF4 592 801 1.6E-267 T 23-04-2016 LT40_RS11635 9691184f36e2b030e4f0b46e95adb052 341 Gene3D G3DSA:3.40.190.10 29 134 1.0E-5 T 23-04-2016 LT40_RS11635 9691184f36e2b030e4f0b46e95adb052 341 Pfam PF13416 Bacterial extracellular solute-binding protein 57 298 4.9E-39 T 23-04-2016 LT40_RS11635 9691184f36e2b030e4f0b46e95adb052 341 PANTHER PTHR30222 7 338 1.3E-77 T 23-04-2016 LT40_RS11635 9691184f36e2b030e4f0b46e95adb052 341 PANTHER PTHR30222:SF2 7 338 1.3E-77 T 23-04-2016 LT40_RS11635 9691184f36e2b030e4f0b46e95adb052 341 Gene3D G3DSA:3.40.190.10 135 283 4.7E-33 T 23-04-2016 LT40_RS11635 9691184f36e2b030e4f0b46e95adb052 341 SUPERFAMILY SSF53850 29 339 5.65E-65 T 23-04-2016 LT40_RS12655 a1be27dd4b311ba6f054cec6964469dd 554 SUPERFAMILY SSF54373 212 310 3.14E-34 T 23-04-2016 LT40_RS12655 a1be27dd4b311ba6f054cec6964469dd 554 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 450 551 1.7E-49 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 LT40_RS12655 a1be27dd4b311ba6f054cec6964469dd 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 1.3E-6 T 23-04-2016 LT40_RS12655 a1be27dd4b311ba6f054cec6964469dd 554 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 180 195 1.3E-6 T 23-04-2016 LT40_RS12655 a1be27dd4b311ba6f054cec6964469dd 554 PANTHER PTHR10617:SF107 2 477 2.5E-244 T 23-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 LT40_RS12655 a1be27dd4b311ba6f054cec6964469dd 554 Gene3D G3DSA:3.50.50.60 6 286 3.6E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12655 a1be27dd4b311ba6f054cec6964469dd 554 SUPERFAMILY SSF51905 311 452 1.77E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12655 a1be27dd4b311ba6f054cec6964469dd 554 SUPERFAMILY SSF51905 5 212 1.77E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12655 a1be27dd4b311ba6f054cec6964469dd 554 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 2.3E-7 T 23-04-2016 LT40_RS12655 a1be27dd4b311ba6f054cec6964469dd 554 PANTHER PTHR10617 2 477 2.5E-244 T 23-04-2016 LT40_RS12655 a1be27dd4b311ba6f054cec6964469dd 554 SUPERFAMILY SSF54862 454 554 7.54E-28 T 23-04-2016 LT40_RS02540 ff8bbf15ec6c1eebdac6f76b3328ed65 262 SUPERFAMILY SSF52540 1 255 4.17E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02540 ff8bbf15ec6c1eebdac6f76b3328ed65 262 Gene3D G3DSA:3.40.50.300 1 255 8.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02540 ff8bbf15ec6c1eebdac6f76b3328ed65 262 PANTHER PTHR13696 1 262 4.2E-136 T 23-04-2016 LT40_RS02540 ff8bbf15ec6c1eebdac6f76b3328ed65 262 Pfam PF13614 AAA domain 1 178 1.5E-41 T 23-04-2016 IPR025669 AAA domain LT40_RS02540 ff8bbf15ec6c1eebdac6f76b3328ed65 262 PANTHER PTHR13696:SF69 1 262 4.2E-136 T 23-04-2016 LT40_RS12395 461cb9db1674e9dbc1bb95039d8e7812 348 PANTHER PTHR10578 26 226 2.8E-105 T 23-04-2016 LT40_RS12395 461cb9db1674e9dbc1bb95039d8e7812 348 PANTHER PTHR10578 248 341 2.8E-105 T 23-04-2016 LT40_RS12395 461cb9db1674e9dbc1bb95039d8e7812 348 Pfam PF01070 FMN-dependent dehydrogenase 178 338 4.2E-14 T 23-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 LT40_RS12395 461cb9db1674e9dbc1bb95039d8e7812 348 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 4 37 1.0E-4 T 23-04-2016 LT40_RS12395 461cb9db1674e9dbc1bb95039d8e7812 348 PIRSF PIRSF003314 3 347 8.4E-121 T 23-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LT40_RS12395 461cb9db1674e9dbc1bb95039d8e7812 348 PANTHER PTHR10578:SF3 26 226 2.8E-105 T 23-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LT40_RS12395 461cb9db1674e9dbc1bb95039d8e7812 348 PANTHER PTHR10578:SF3 248 341 2.8E-105 T 23-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LT40_RS12395 461cb9db1674e9dbc1bb95039d8e7812 348 SUPERFAMILY SSF51395 29 341 5.5E-69 T 23-04-2016 LT40_RS12395 461cb9db1674e9dbc1bb95039d8e7812 348 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 6 344 39.023 T 23-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LT40_RS12395 461cb9db1674e9dbc1bb95039d8e7812 348 Gene3D G3DSA:3.20.20.70 28 340 4.5E-115 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS12395 461cb9db1674e9dbc1bb95039d8e7812 348 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 8 341 1.3E-115 T 23-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 76 92 1.6E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 301 317 1.6E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 390 405 1.6E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 262 280 1.6E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 109 129 1.6E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 144 161 1.6E-42 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 12 423 1.2E-139 T 23-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 Gene3D G3DSA:2.30.250.10 87 220 1.0E-45 T 23-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 SUPERFAMILY SSF53187 214 423 1.07E-106 T 23-04-2016 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 SUPERFAMILY SSF53187 4 87 1.07E-106 T 23-04-2016 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 SUPERFAMILY SSF101821 88 213 1.37E-32 T 23-04-2016 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 Hamap MF_00467 Probable M18 family aminopeptidase 2 [apeB]. 1 425 56.254 T 23-04-2016 IPR022984 M18 family aminopeptidase 2, putative GO:0004177 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 PANTHER PTHR28570 1 425 1.4E-194 T 23-04-2016 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 Gene3D G3DSA:3.40.630.10 223 424 2.6E-121 T 23-04-2016 LT40_RS04790 929eb03e6aaea892f5cedbfd838250a0 429 Gene3D G3DSA:3.40.630.10 4 86 2.6E-121 T 23-04-2016 LT40_RS17530 86c4ddec803b76227f25c079281c9ff6 256 SUPERFAMILY SSF52402 24 215 2.72E-25 T 23-04-2016 LT40_RS17530 86c4ddec803b76227f25c079281c9ff6 256 Gene3D G3DSA:3.40.50.620 25 254 2.2E-25 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS17530 86c4ddec803b76227f25c079281c9ff6 256 SMART SM00893 11 195 8.9E-10 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 LT40_RS17530 86c4ddec803b76227f25c079281c9ff6 256 Pfam PF01012 Electron transfer flavoprotein domain 26 176 8.2E-17 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 LT40_RS17530 86c4ddec803b76227f25c079281c9ff6 256 PANTHER PTHR21294 26 166 3.3E-17 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 LT40_RS04730 bae228fc4b5719bd39cfa78c670c901d 977 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 610 690 4.1E-24 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 LT40_RS04730 bae228fc4b5719bd39cfa78c670c901d 977 PANTHER PTHR11219 73 690 2.5E-149 T 23-04-2016 LT40_RS04730 bae228fc4b5719bd39cfa78c670c901d 977 PANTHER PTHR11219:SF45 73 690 2.5E-149 T 23-04-2016 LT40_RS19680 cbfb701a4c167f8f6ec123e0f979ef69 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 25 113 1.7E-24 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 LT40_RS19680 cbfb701a4c167f8f6ec123e0f979ef69 282 Gene3D G3DSA:3.20.20.70 136 269 3.0E-59 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS19680 cbfb701a4c167f8f6ec123e0f979ef69 282 SUPERFAMILY SSF51690 115 280 3.92E-59 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 LT40_RS19680 cbfb701a4c167f8f6ec123e0f979ef69 282 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 17 279 2.7E-91 T 23-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 LT40_RS19680 cbfb701a4c167f8f6ec123e0f979ef69 282 Gene3D G3DSA:3.90.1170.20 10 135 6.0E-48 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 LT40_RS19680 cbfb701a4c167f8f6ec123e0f979ef69 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 115 279 3.1E-56 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 LT40_RS19680 cbfb701a4c167f8f6ec123e0f979ef69 282 SUPERFAMILY SSF54675 11 113 1.6E-30 T 23-04-2016 LT40_RS19680 cbfb701a4c167f8f6ec123e0f979ef69 282 PIRSF PIRSF006250 7 282 9.7E-101 T 23-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD LT40_RS19680 cbfb701a4c167f8f6ec123e0f979ef69 282 PANTHER PTHR32179 1 280 2.7E-119 T 23-04-2016 LT40_RS17280 319de48ad2d12d4587e1ad5331a678f6 973 SUPERFAMILY SSF53383 555 971 2.74E-104 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS17280 319de48ad2d12d4587e1ad5331a678f6 973 PANTHER PTHR11986:SF23 539 971 3.1E-149 T 23-04-2016 LT40_RS17280 319de48ad2d12d4587e1ad5331a678f6 973 Gene3D G3DSA:3.90.1150.10 853 971 3.2E-32 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS17280 319de48ad2d12d4587e1ad5331a678f6 973 Gene3D G3DSA:3.40.640.10 601 852 1.0E-67 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS17280 319de48ad2d12d4587e1ad5331a678f6 973 Pfam PF01636 Phosphotransferase enzyme family 41 265 3.2E-22 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase LT40_RS17280 319de48ad2d12d4587e1ad5331a678f6 973 Pfam PF00202 Aminotransferase class-III 564 968 1.9E-70 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS17280 319de48ad2d12d4587e1ad5331a678f6 973 SUPERFAMILY SSF56112 18 328 2.04E-45 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS17280 319de48ad2d12d4587e1ad5331a678f6 973 PANTHER PTHR11986 539 971 3.1E-149 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS17280 319de48ad2d12d4587e1ad5331a678f6 973 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 781 819 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS17280 319de48ad2d12d4587e1ad5331a678f6 973 Gene3D G3DSA:3.30.200.20 45 101 7.4E-6 T 23-04-2016 LT40_RS17280 319de48ad2d12d4587e1ad5331a678f6 973 Gene3D G3DSA:3.90.1200.10 124 320 3.7E-20 T 23-04-2016 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 19 227 1.8E-91 T 23-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 Gene3D G3DSA:3.40.50.300 18 225 5.9E-94 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 SMART SM00387 758 870 7.5E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 Gene3D G3DSA:1.10.287.130 642 710 9.0E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 PANTHER PTHR24423 578 872 4.4E-178 T 23-04-2016 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 PANTHER PTHR24423 16 194 4.4E-178 T 23-04-2016 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 Gene3D G3DSA:3.30.565.10 716 872 9.5E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 Gene3D G3DSA:3.40.50.620 243 347 6.7E-10 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 Pfam PF13493 Domain of unknown function (DUF4118) 386 491 2.1E-24 T 23-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 SUPERFAMILY SSF55874 704 870 3.27E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 795 809 1.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 829 847 1.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 813 823 1.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 PRINTS PR00344 Bacterial sensor protein C-terminal signature 854 867 1.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 SUPERFAMILY SSF52402 248 354 2.18E-7 T 23-04-2016 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 Gene3D G3DSA:1.20.120.620 382 485 1.1E-27 T 23-04-2016 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 PANTHER PTHR24423:SF562 578 872 4.4E-178 T 23-04-2016 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 PANTHER PTHR24423:SF562 16 194 4.4E-178 T 23-04-2016 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 SUPERFAMILY SSF47384 642 714 7.46E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 Pfam PF00512 His Kinase A (phospho-acceptor) domain 647 714 7.1E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 763 869 5.7E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 SMART SM00388 646 714 1.0E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 SUPERFAMILY SSF55781 491 632 5.89E-7 T 23-04-2016 IPR029016 GAF domain-like LT40_RS01760 45da43667b2dcf0dda4587949b7d71c3 878 Pfam PF00582 Universal stress protein family 248 346 1.6E-4 T 23-04-2016 IPR006016 UspA GO:0006950 LT40_RS14540 a894a27400cfa4286c4bc582ccd17f47 121 SUPERFAMILY SSF52172 1 120 6.55E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS14540 a894a27400cfa4286c4bc582ccd17f47 121 SMART SM00448 2 115 2.3E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS14540 a894a27400cfa4286c4bc582ccd17f47 121 Gene3D G3DSA:3.40.50.2300 1 120 1.2E-38 T 23-04-2016 LT40_RS14540 a894a27400cfa4286c4bc582ccd17f47 121 Pfam PF00072 Response regulator receiver domain 4 115 2.8E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS14540 a894a27400cfa4286c4bc582ccd17f47 121 PANTHER PTHR26402 2 121 4.9E-39 T 23-04-2016 LT40_RS08020 653e1b60a3c8a90b732f098ea67c3e51 674 Pfam PF00672 HAMP domain 325 391 1.1E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS08020 653e1b60a3c8a90b732f098ea67c3e51 674 SMART SM00304 345 397 6.2E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS08020 653e1b60a3c8a90b732f098ea67c3e51 674 PANTHER PTHR32089:SF34 266 674 1.2E-118 T 23-04-2016 LT40_RS08020 653e1b60a3c8a90b732f098ea67c3e51 674 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 539 568 3.7E-7 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS08020 653e1b60a3c8a90b732f098ea67c3e51 674 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 426 455 3.7E-7 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS08020 653e1b60a3c8a90b732f098ea67c3e51 674 PANTHER PTHR32089 266 674 1.2E-118 T 23-04-2016 LT40_RS08020 653e1b60a3c8a90b732f098ea67c3e51 674 SMART SM00283 412 673 1.3E-70 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS08020 653e1b60a3c8a90b732f098ea67c3e51 674 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 481 672 4.9E-48 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS08020 653e1b60a3c8a90b732f098ea67c3e51 674 Gene3D G3DSA:1.10.287.950 427 639 5.3E-58 T 23-04-2016 LT40_RS08020 653e1b60a3c8a90b732f098ea67c3e51 674 SUPERFAMILY SSF58104 365 674 2.75E-76 T 23-04-2016 LT40_RS04940 34eab69bba801a0e638c340917b6e444 248 Gene3D G3DSA:3.30.1270.10 84 134 8.2E-43 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 LT40_RS04940 34eab69bba801a0e638c340917b6e444 248 Gene3D G3DSA:3.30.1270.10 212 247 8.2E-43 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 LT40_RS04940 34eab69bba801a0e638c340917b6e444 248 Pfam PF01709 Transcriptional regulator 5 237 5.9E-91 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like LT40_RS04940 34eab69bba801a0e638c340917b6e444 248 SUPERFAMILY SSF75625 3 247 7.85E-96 T 23-04-2016 IPR029072 YebC-like LT40_RS04940 34eab69bba801a0e638c340917b6e444 248 Gene3D G3DSA:3.30.70.980 135 205 1.6E-25 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 LT40_RS04940 34eab69bba801a0e638c340917b6e444 248 PANTHER PTHR12532:SF0 1 241 3.0E-115 T 23-04-2016 LT40_RS04940 34eab69bba801a0e638c340917b6e444 248 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 3.1E-98 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like LT40_RS04940 34eab69bba801a0e638c340917b6e444 248 PANTHER PTHR12532 1 241 3.0E-115 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like LT40_RS04940 34eab69bba801a0e638c340917b6e444 248 Gene3D G3DSA:1.10.10.200 1 78 7.2E-35 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like LT40_RS04940 34eab69bba801a0e638c340917b6e444 248 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 36.218 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like LT40_RS07140 b0e7eaf0bac7b7243122f0826a11dd6c 496 PANTHER PTHR11699 1 494 0.0 T 23-04-2016 LT40_RS07140 b0e7eaf0bac7b7243122f0826a11dd6c 496 Pfam PF00171 Aldehyde dehydrogenase family 32 491 4.5E-166 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS07140 b0e7eaf0bac7b7243122f0826a11dd6c 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS07140 b0e7eaf0bac7b7243122f0826a11dd6c 496 Gene3D G3DSA:3.40.605.10 20 281 4.0E-96 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS07140 b0e7eaf0bac7b7243122f0826a11dd6c 496 Gene3D G3DSA:3.40.309.10 282 465 9.7E-65 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS07140 b0e7eaf0bac7b7243122f0826a11dd6c 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS07140 b0e7eaf0bac7b7243122f0826a11dd6c 496 PANTHER PTHR11699:SF174 1 494 0.0 T 23-04-2016 LT40_RS07140 b0e7eaf0bac7b7243122f0826a11dd6c 496 SUPERFAMILY SSF53720 16 494 1.7E-160 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS03705 f70a52b3e6947c14971dddeb897caafa 341 Pfam PF04085 rod shape-determining protein MreC 112 256 5.9E-35 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 LT40_RS03705 f70a52b3e6947c14971dddeb897caafa 341 PANTHER PTHR34138:SF1 1 335 2.0E-79 T 23-04-2016 LT40_RS03705 f70a52b3e6947c14971dddeb897caafa 341 PANTHER PTHR34138 1 335 2.0E-79 T 23-04-2016 LT40_RS03705 f70a52b3e6947c14971dddeb897caafa 341 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 263 2.4E-65 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 LT40_RS00775 79b828953f4cf4cfd661b82efbea1df4 71 SUPERFAMILY SSF103642 50 70 1.96E-8 T 23-04-2016 LT40_RS00775 79b828953f4cf4cfd661b82efbea1df4 71 Pfam PF02810 SEC-C motif 53 70 4.7E-11 T 23-04-2016 IPR004027 SEC-C motif LT40_RS00775 79b828953f4cf4cfd661b82efbea1df4 71 Gene3D G3DSA:3.10.450.50 19 70 7.4E-12 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS05600 9788d5b1b6b644c78b82a1690d477135 227 Pfam PF00072 Response regulator receiver domain 3 112 9.4E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05600 9788d5b1b6b644c78b82a1690d477135 227 SMART SM00448 1 112 3.7E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05600 9788d5b1b6b644c78b82a1690d477135 227 Gene3D G3DSA:3.40.50.2300 1 119 3.6E-34 T 23-04-2016 LT40_RS05600 9788d5b1b6b644c78b82a1690d477135 227 SUPERFAMILY SSF52172 1 171 3.08E-35 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS05600 9788d5b1b6b644c78b82a1690d477135 227 Gene3D G3DSA:1.10.10.10 125 217 8.9E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05600 9788d5b1b6b644c78b82a1690d477135 227 PANTHER PTHR26402 1 221 5.1E-89 T 23-04-2016 LT40_RS05600 9788d5b1b6b644c78b82a1690d477135 227 PANTHER PTHR26402:SF399 1 221 5.1E-89 T 23-04-2016 LT40_RS05600 9788d5b1b6b644c78b82a1690d477135 227 SMART SM00862 145 216 5.1E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS05600 9788d5b1b6b644c78b82a1690d477135 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.8E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS06320 040cfcde5e9160eb7a7dcb3da9661cff 210 PANTHER PTHR35011 66 205 1.3E-68 T 23-04-2016 LT40_RS06320 040cfcde5e9160eb7a7dcb3da9661cff 210 PANTHER PTHR35011 1 38 1.3E-68 T 23-04-2016 LT40_RS06320 040cfcde5e9160eb7a7dcb3da9661cff 210 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 67 182 8.0E-19 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component LT40_RS06320 040cfcde5e9160eb7a7dcb3da9661cff 210 PANTHER PTHR35011:SF1 66 205 1.3E-68 T 23-04-2016 LT40_RS06320 040cfcde5e9160eb7a7dcb3da9661cff 210 PANTHER PTHR35011:SF1 1 38 1.3E-68 T 23-04-2016 LT40_RS13540 f29494559af6e41740c3ad11faa8d789 421 Gene3D G3DSA:3.40.50.2300 146 345 8.1E-71 T 23-04-2016 LT40_RS13540 f29494559af6e41740c3ad11faa8d789 421 PANTHER PTHR30483:SF8 1 420 2.4E-229 T 23-04-2016 LT40_RS13540 f29494559af6e41740c3ad11faa8d789 421 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 9.2E-178 T 23-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA LT40_RS13540 f29494559af6e41740c3ad11faa8d789 421 SUPERFAMILY SSF53822 30 409 5.42E-91 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS13540 f29494559af6e41740c3ad11faa8d789 421 PANTHER PTHR30483 1 420 2.4E-229 T 23-04-2016 LT40_RS13540 f29494559af6e41740c3ad11faa8d789 421 Pfam PF13433 Periplasmic binding protein domain 31 407 2.3E-173 T 23-04-2016 LT40_RS02615 247edbe1b6a4461d6c1ce34a6585e123 399 SMART SM00028 150 183 2.5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS02615 247edbe1b6a4461d6c1ce34a6585e123 399 SMART SM00028 221 254 3.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS02615 247edbe1b6a4461d6c1ce34a6585e123 399 PANTHER PTHR12558:SF12 141 271 2.9E-34 T 23-04-2016 LT40_RS02615 247edbe1b6a4461d6c1ce34a6585e123 399 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 4 116 3.5E-29 T 23-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI LT40_RS02615 247edbe1b6a4461d6c1ce34a6585e123 399 Gene3D G3DSA:1.25.40.10 139 187 3.4E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS02615 247edbe1b6a4461d6c1ce34a6585e123 399 Pfam PF13432 Tetratricopeptide repeat 138 179 1.4E-4 T 23-04-2016 LT40_RS02615 247edbe1b6a4461d6c1ce34a6585e123 399 Gene3D G3DSA:1.25.40.10 188 269 2.7E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS02615 247edbe1b6a4461d6c1ce34a6585e123 399 SUPERFAMILY SSF48452 142 273 1.84E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS02615 247edbe1b6a4461d6c1ce34a6585e123 399 PANTHER PTHR12558 141 271 2.9E-34 T 23-04-2016 LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 SMART SM00387 318 430 3.2E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 SUPERFAMILY SSF55874 270 428 4.98E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 5.9E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 5.9E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 5.9E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 PANTHER PTHR24423 140 146 5.9E-59 T 23-04-2016 LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 PANTHER PTHR24423 162 428 5.9E-59 T 23-04-2016 LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 Gene3D G3DSA:3.30.565.10 283 430 6.9E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 Gene3D G3DSA:1.10.287.130 211 275 1.8E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 428 5.7E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 Pfam PF00672 HAMP domain 149 216 5.7E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 SMART SM00388 221 280 1.7E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 SMART SM00304 168 220 3.1E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 276 4.3E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS17180 566a3ffed472d5022b6253f66f063476 437 SUPERFAMILY SSF47384 205 277 8.63E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 PANTHER PTHR26402 1 205 5.6E-47 T 23-04-2016 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 Gene3D G3DSA:3.40.50.2300 2 155 3.2E-23 T 23-04-2016 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 SUPERFAMILY SSF46894 137 211 4.76E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 Gene3D G3DSA:1.10.10.10 156 211 1.1E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS20395 010246de2cf73a30c0c1537124775204 212 PANTHER PTHR26402:SF458 1 205 5.6E-47 T 23-04-2016 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 Pfam PF00072 Response regulator receiver domain 3 117 8.0E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 SMART SM00421 149 206 5.1E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 205 9.1E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 SUPERFAMILY SSF52172 2 130 7.12E-22 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS20395 010246de2cf73a30c0c1537124775204 212 SMART SM00448 1 117 1.1E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 9.9E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 9.9E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS20395 010246de2cf73a30c0c1537124775204 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 9.9E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 505 525 5.8E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 488 505 5.8E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 PANTHER PTHR32071 126 528 8.8E-163 T 23-04-2016 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 Gene3D G3DSA:3.40.50.300 197 371 5.6E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 SMART SM00382 219 362 6.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 SUPERFAMILY SSF52540 199 433 2.92E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 Gene3D G3DSA:1.10.8.60 372 422 1.6E-18 T 23-04-2016 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 Pfam PF01590 GAF domain 34 164 5.2E-7 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 Gene3D G3DSA:1.10.10.60 423 517 5.8E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 223 236 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 Pfam PF00158 Sigma-54 interaction domain 199 365 1.8E-66 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 412 421 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 Pfam PF02954 Bacterial regulatory protein, Fis family 487 517 4.5E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 PANTHER PTHR32071:SF35 126 528 8.8E-163 T 23-04-2016 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 SUPERFAMILY SSF55781 10 166 1.4E-14 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 SUPERFAMILY SSF46689 471 522 1.34E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 Gene3D G3DSA:3.30.450.40 10 168 7.7E-14 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08115 6cbce47d33f5fc848d02e5281b3e1d05 528 SMART SM00065 29 175 1.3E-10 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS16520 3313c5b83def95aecd8b14bd91451f67 301 Hamap MF_00082_B Acetylglutamate kinase [argB]. 26 297 37.353 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS16520 3313c5b83def95aecd8b14bd91451f67 301 PIRSF PIRSF000728 13 297 5.7E-111 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS16520 3313c5b83def95aecd8b14bd91451f67 301 TIGRFAM TIGR00761 argB: acetylglutamate kinase 29 272 4.9E-79 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS16520 3313c5b83def95aecd8b14bd91451f67 301 SUPERFAMILY SSF53633 8 298 1.11E-98 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS16520 3313c5b83def95aecd8b14bd91451f67 301 Pfam PF00696 Amino acid kinase family 28 274 7.9E-45 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS16520 3313c5b83def95aecd8b14bd91451f67 301 Gene3D G3DSA:3.40.1160.10 27 296 4.2E-105 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS16520 3313c5b83def95aecd8b14bd91451f67 301 PANTHER PTHR23342 12 297 4.6E-123 T 23-04-2016 LT40_RS16520 3313c5b83def95aecd8b14bd91451f67 301 PRINTS PR00474 Glutamate 5-kinase family signature 197 224 2.7E-8 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LT40_RS16520 3313c5b83def95aecd8b14bd91451f67 301 PRINTS PR00474 Glutamate 5-kinase family signature 247 267 2.7E-8 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LT40_RS16520 3313c5b83def95aecd8b14bd91451f67 301 PRINTS PR00474 Glutamate 5-kinase family signature 59 73 2.7E-8 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 27 720 1.2E-245 T 23-04-2016 IPR017750 ATPase, type I secretion system LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 Pfam PF00664 ABC transporter transmembrane region 180 444 6.6E-27 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 SMART SM00382 518 704 5.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 PANTHER PTHR24221 146 715 3.7E-247 T 23-04-2016 LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 PANTHER PTHR24221 18 112 3.7E-247 T 23-04-2016 LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 PANTHER PTHR24221:SF260 146 715 3.7E-247 T 23-04-2016 LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 PANTHER PTHR24221:SF260 18 112 3.7E-247 T 23-04-2016 LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 Gene3D G3DSA:1.20.1560.10 164 474 3.5E-55 T 23-04-2016 LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 SUPERFAMILY SSF90123 164 476 4.19E-53 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 SUPERFAMILY SSF52540 482 713 1.59E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 Gene3D G3DSA:3.40.50.300 492 717 2.9E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 Pfam PF00005 ABC transporter 513 658 2.5E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS02235 d806a4ab672b5c843d4010c4a66feb1a 726 Gene3D G3DSA:3.90.70.10 27 142 1.1E-14 T 23-04-2016 LT40_RS09520 c6336f7b2b6c49cab1c8d165ab4a0ded 575 Pfam PF07244 Surface antigen variable number repeat 189 247 1.6E-6 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 LT40_RS09520 c6336f7b2b6c49cab1c8d165ab4a0ded 575 PANTHER PTHR12815:SF12 10 575 1.2E-205 T 23-04-2016 LT40_RS09520 c6336f7b2b6c49cab1c8d165ab4a0ded 575 Gene3D G3DSA:2.40.160.50 437 572 7.4E-18 T 23-04-2016 LT40_RS09520 c6336f7b2b6c49cab1c8d165ab4a0ded 575 PANTHER PTHR12815 10 575 1.2E-205 T 23-04-2016 LT40_RS09520 c6336f7b2b6c49cab1c8d165ab4a0ded 575 Pfam PF01103 Surface antigen 293 572 1.3E-34 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 LT40_RS10410 51e5e26e5c8b0b4047f8acd08018254f 279 Gene3D G3DSA:3.40.190.10 125 228 1.7E-11 T 23-04-2016 LT40_RS10410 51e5e26e5c8b0b4047f8acd08018254f 279 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LT40_RS10410 51e5e26e5c8b0b4047f8acd08018254f 279 PANTHER PTHR18966:SF191 34 272 8.2E-26 T 23-04-2016 LT40_RS10410 51e5e26e5c8b0b4047f8acd08018254f 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 272 1.9E-44 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS10410 51e5e26e5c8b0b4047f8acd08018254f 279 SUPERFAMILY SSF53850 11 274 1.01E-47 T 23-04-2016 LT40_RS10410 51e5e26e5c8b0b4047f8acd08018254f 279 SMART SM00062 38 274 5.9E-28 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS10410 51e5e26e5c8b0b4047f8acd08018254f 279 PANTHER PTHR18966 34 272 8.2E-26 T 23-04-2016 LT40_RS10410 51e5e26e5c8b0b4047f8acd08018254f 279 Gene3D G3DSA:3.40.190.10 36 124 7.4E-31 T 23-04-2016 LT40_RS10410 51e5e26e5c8b0b4047f8acd08018254f 279 Gene3D G3DSA:3.40.190.10 233 276 7.4E-31 T 23-04-2016 LT40_RS12965 922402eaab013817a79e2044b2197384 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS12965 922402eaab013817a79e2044b2197384 267 SUPERFAMILY SSF55347 127 236 2.18E-37 T 23-04-2016 LT40_RS12965 922402eaab013817a79e2044b2197384 267 PANTHER PTHR20836:SF0 3 266 2.6E-99 T 23-04-2016 LT40_RS12965 922402eaab013817a79e2044b2197384 267 PIRSF PIRSF000161 1 267 1.5E-89 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS12965 922402eaab013817a79e2044b2197384 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 3.1E-43 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS12965 922402eaab013817a79e2044b2197384 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 265 2.4E-100 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS12965 922402eaab013817a79e2044b2197384 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 125 4.9E-42 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS12965 922402eaab013817a79e2044b2197384 267 PANTHER PTHR20836 3 266 2.6E-99 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS12965 922402eaab013817a79e2044b2197384 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.946 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS12965 922402eaab013817a79e2044b2197384 267 Gene3D G3DSA:3.40.50.720 2 163 4.7E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12965 922402eaab013817a79e2044b2197384 267 SUPERFAMILY SSF51735 236 266 6.12E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12965 922402eaab013817a79e2044b2197384 267 SUPERFAMILY SSF51735 1 126 6.12E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02605 881000b83340c90b36cbd6e249f06590 178 PANTHER PTHR10681 1 172 1.1E-57 T 23-04-2016 LT40_RS02605 881000b83340c90b36cbd6e249f06590 178 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 26 170 2.7E-52 T 23-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 LT40_RS02605 881000b83340c90b36cbd6e249f06590 178 PANTHER PTHR10681:SF107 1 172 1.1E-57 T 23-04-2016 LT40_RS02605 881000b83340c90b36cbd6e249f06590 178 Pfam PF08534 Redoxin 37 159 5.2E-18 T 23-04-2016 IPR013740 Redoxin GO:0016491 LT40_RS02605 881000b83340c90b36cbd6e249f06590 178 SUPERFAMILY SSF52833 41 171 5.98E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS02605 881000b83340c90b36cbd6e249f06590 178 Gene3D G3DSA:3.40.30.10 9 174 1.2E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS02605 881000b83340c90b36cbd6e249f06590 178 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LT40_RS02870 8a99f55da31c745b6c3ec39da9985086 187 SUPERFAMILY SSF47413 13 79 1.18E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS02870 8a99f55da31c745b6c3ec39da9985086 187 PANTHER PTHR10245:SF9 13 182 1.7E-34 T 23-04-2016 LT40_RS02870 8a99f55da31c745b6c3ec39da9985086 187 Pfam PF01381 Helix-turn-helix 19 73 6.0E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS02870 8a99f55da31c745b6c3ec39da9985086 187 SUPERFAMILY SSF51182 58 182 1.73E-20 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS02870 8a99f55da31c745b6c3ec39da9985086 187 PANTHER PTHR10245 13 182 1.7E-34 T 23-04-2016 LT40_RS02870 8a99f55da31c745b6c3ec39da9985086 187 Pfam PF07883 Cupin domain 118 182 2.4E-11 T 23-04-2016 IPR013096 Cupin 2, conserved barrel LT40_RS02870 8a99f55da31c745b6c3ec39da9985086 187 Gene3D G3DSA:2.60.120.10 111 182 3.0E-22 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS02870 8a99f55da31c745b6c3ec39da9985086 187 Gene3D G3DSA:1.10.260.40 16 110 1.2E-20 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS02870 8a99f55da31c745b6c3ec39da9985086 187 SMART SM00530 18 73 5.1E-15 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 450 626 2.9E-42 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 PRINTS PR00315 GTP-binding elongation factor signature 87 95 3.1E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 PRINTS PR00315 GTP-binding elongation factor signature 107 117 3.1E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 PRINTS PR00315 GTP-binding elongation factor signature 26 39 3.1E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 PRINTS PR00315 GTP-binding elongation factor signature 123 134 3.1E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 PRINTS PR00315 GTP-binding elongation factor signature 160 169 3.1E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 Pfam PF00009 Elongation factor Tu GTP binding domain 23 225 1.8E-44 T 23-04-2016 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 432 7.3E-207 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 SUPERFAMILY SSF52540 462 629 9.65E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 476 54.112 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 SUPERFAMILY SSF50447 243 328 3.95E-25 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 462 630 31.5 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 210 1.1E-13 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 SUPERFAMILY SSF52540 18 234 4.02E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 Pfam PF01583 Adenylylsulphate kinase 463 614 2.4E-49 T 23-04-2016 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 Gene3D G3DSA:3.40.50.300 8 234 2.4E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 PANTHER PTHR23115 73 346 4.2E-77 T 23-04-2016 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 PANTHER PTHR23115 10 51 4.2E-77 T 23-04-2016 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 Gene3D G3DSA:3.40.50.300 448 632 5.1E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 Gene3D G3DSA:2.40.30.10 243 362 1.8E-22 T 23-04-2016 LT40_RS03890 0fc739b23c5fcad44cfd666a7954560d 632 SUPERFAMILY SSF50465 331 433 3.36E-32 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 SMART SM00388 525 593 1.6E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 PRINTS PR01033 Phytochrome signature 437 456 4.8E-11 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 PRINTS PR01033 Phytochrome signature 468 486 4.8E-11 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 PRINTS PR01033 Phytochrome signature 167 186 4.8E-11 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 PRINTS PR01033 Phytochrome signature 254 275 4.8E-11 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 Pfam PF01590 GAF domain 152 317 1.2E-18 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 SUPERFAMILY SSF55781 330 511 4.71E-43 T 23-04-2016 IPR029016 GAF domain-like LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 Gene3D G3DSA:3.30.565.10 592 746 1.9E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 PANTHER PTHR24423:SF518 111 745 4.2E-114 T 23-04-2016 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 Gene3D G3DSA:3.30.450.40 140 329 3.1E-6 T 23-04-2016 IPR029016 GAF domain-like LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 Pfam PF00360 Phytochrome region 334 509 6.0E-45 T 23-04-2016 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 Pfam PF08446 PAS fold 17 126 2.0E-19 T 23-04-2016 IPR013654 PAS fold-2 GO:0006355 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 SMART SM00387 634 746 7.1E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 SUPERFAMILY SSF55785 13 126 1.57E-22 T 23-04-2016 IPR000014 PAS domain LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 Gene3D G3DSA:1.10.287.130 518 588 6.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 SMART SM00065 152 330 0.0072 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 SUPERFAMILY SSF55874 592 746 4.71E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 SUPERFAMILY SSF55781 138 324 1.32E-56 T 23-04-2016 IPR029016 GAF domain-like LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 PANTHER PTHR24423 111 745 4.2E-114 T 23-04-2016 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 Pfam PF00512 His Kinase A (phospho-acceptor) domain 527 591 2.1E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 SUPERFAMILY SSF47384 509 591 5.1E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10895 8d7a76a1ae5c9bd1cb3769652eb91ef5 755 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 635 744 2.3E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS11525 628afbe4b63ac96360ffe9a8986bc948 342 PANTHER PTHR34697 21 335 8.7E-38 T 23-04-2016 LT40_RS11525 628afbe4b63ac96360ffe9a8986bc948 342 PANTHER PTHR34697:SF2 21 335 8.7E-38 T 23-04-2016 LT40_RS11525 628afbe4b63ac96360ffe9a8986bc948 342 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 41 314 1.1E-14 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LT40_RS03455 ff3bbcb26f94d8880016c0aaf653619b 136 PANTHER PTHR11803 27 136 7.5E-33 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS03455 ff3bbcb26f94d8880016c0aaf653619b 136 Pfam PF01042 Endoribonuclease L-PSP 26 133 3.6E-23 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS03455 ff3bbcb26f94d8880016c0aaf653619b 136 SUPERFAMILY SSF55298 24 135 5.65E-32 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS03455 ff3bbcb26f94d8880016c0aaf653619b 136 Gene3D G3DSA:3.30.1330.40 5 135 3.7E-40 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS19530 a145ac9082bbc616e8875abbfdab2610 320 Gene3D G3DSA:3.10.290.10 18 65 3.0E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS19530 a145ac9082bbc616e8875abbfdab2610 320 PANTHER PTHR11079:SF73 6 319 8.8E-140 T 23-04-2016 LT40_RS19530 a145ac9082bbc616e8875abbfdab2610 320 PANTHER PTHR11079 6 319 8.8E-140 T 23-04-2016 LT40_RS19530 a145ac9082bbc616e8875abbfdab2610 320 SUPERFAMILY SSF55174 17 104 7.91E-8 T 23-04-2016 LT40_RS19530 a145ac9082bbc616e8875abbfdab2610 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 311 5.1E-94 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS19530 a145ac9082bbc616e8875abbfdab2610 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS19530 a145ac9082bbc616e8875abbfdab2610 320 Pfam PF01479 S4 domain 18 62 9.7E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS19530 a145ac9082bbc616e8875abbfdab2610 320 Pfam PF00849 RNA pseudouridylate synthase 92 241 3.2E-33 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS19530 a145ac9082bbc616e8875abbfdab2610 320 SUPERFAMILY SSF55120 75 314 1.07E-79 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS16430 77e08218221d66b5c5408e80d1275fb4 123 SUPERFAMILY SSF55718 13 116 2.35E-5 T 23-04-2016 IPR003033 SCP2 sterol-binding domain LT40_RS16430 77e08218221d66b5c5408e80d1275fb4 123 Pfam PF02036 SCP-2 sterol transfer family 20 116 1.4E-4 T 23-04-2016 IPR003033 SCP2 sterol-binding domain LT40_RS16430 77e08218221d66b5c5408e80d1275fb4 123 Gene3D G3DSA:3.30.1050.10 16 118 2.6E-4 T 23-04-2016 IPR003033 SCP2 sterol-binding domain LT40_RS16050 becf2ea49e1b8c668066144a60d57346 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 9.5E-26 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS16050 becf2ea49e1b8c668066144a60d57346 44 Pfam PF00468 Ribosomal protein L34 1 44 5.6E-25 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS16050 becf2ea49e1b8c668066144a60d57346 44 PANTHER PTHR14503 1 44 2.0E-21 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS16050 becf2ea49e1b8c668066144a60d57346 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 40 2.0E-14 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS16050 becf2ea49e1b8c668066144a60d57346 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.39 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS16050 becf2ea49e1b8c668066144a60d57346 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13550 a3468383670e8d107da2e067e898a88e 359 PANTHER PTHR30482 1 95 3.0E-189 T 23-04-2016 LT40_RS13550 a3468383670e8d107da2e067e898a88e 359 PANTHER PTHR30482 117 359 3.0E-189 T 23-04-2016 LT40_RS13550 a3468383670e8d107da2e067e898a88e 359 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 45 352 1.2E-131 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC LT40_RS13550 a3468383670e8d107da2e067e898a88e 359 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 341 6.1E-41 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS13550 a3468383670e8d107da2e067e898a88e 359 PANTHER PTHR30482:SF4 1 95 3.0E-189 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC LT40_RS13550 a3468383670e8d107da2e067e898a88e 359 PANTHER PTHR30482:SF4 117 359 3.0E-189 T 23-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC LT40_RS19845 900e119a8cbcced00ae361e596440e26 251 SUPERFAMILY SSF69572 2 247 1.27E-84 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LT40_RS19845 900e119a8cbcced00ae361e596440e26 251 Gene3D G3DSA:3.40.50.720 3 247 3.7E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19845 900e119a8cbcced00ae361e596440e26 251 Pfam PF00899 ThiF family 10 244 9.9E-62 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LT40_RS19845 900e119a8cbcced00ae361e596440e26 251 PANTHER PTHR10953 2 247 2.6E-92 T 23-04-2016 LT40_RS19845 900e119a8cbcced00ae361e596440e26 251 PANTHER PTHR10953:SF158 2 247 2.6E-92 T 23-04-2016 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 SUPERFAMILY SSF64518 1 188 1.05E-76 T 23-04-2016 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 SUPERFAMILY SSF64518 281 533 1.05E-76 T 23-04-2016 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 SUPERFAMILY SSF64518 224 232 1.05E-76 T 23-04-2016 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 PANTHER PTHR30244 1 183 2.5E-57 T 23-04-2016 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 PANTHER PTHR30244 395 531 2.5E-57 T 23-04-2016 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 PANTHER PTHR30244:SF5 1 183 2.5E-57 T 23-04-2016 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 PANTHER PTHR30244:SF5 395 531 2.5E-57 T 23-04-2016 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 1.9E-23 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 Pfam PF00700 Bacterial flagellin C-terminal helical region 452 531 6.2E-5 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 220 3.6E-58 T 23-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 Gene3D G3DSA:1.20.1330.10 53 168 9.1E-22 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LT40_RS02350 3de72bf99d921b3a616c709ff5779d18 533 Gene3D G3DSA:1.20.1330.10 438 478 9.1E-22 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 Pfam PF13437 HlyD family secretion protein 292 396 7.2E-20 T 23-04-2016 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 Gene3D G3DSA:2.40.50.100 290 324 1.2E-14 T 23-04-2016 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 Gene3D G3DSA:2.40.50.100 65 96 1.2E-14 T 23-04-2016 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 PANTHER PTHR30386 152 441 1.2E-108 T 23-04-2016 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 PANTHER PTHR30386 16 117 1.2E-108 T 23-04-2016 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 338 362 3.0E-51 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 440 3.0E-51 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 420 3.0E-51 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 305 326 3.0E-51 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 32 55 3.0E-51 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 385 3.0E-51 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 74 94 3.0E-51 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 24 440 2.2E-110 T 23-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 PANTHER PTHR30386:SF3 152 441 1.2E-108 T 23-04-2016 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 PANTHER PTHR30386:SF3 16 117 1.2E-108 T 23-04-2016 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 Pfam PF13533 Biotin-lipoyl like 72 100 1.1E-6 T 23-04-2016 LT40_RS09180 415a70dfc85a75fbb698d7606d472723 441 SUPERFAMILY SSF111369 71 121 7.45E-6 T 23-04-2016 LT40_RS14135 dcb8c27617498bf93d7ac43549b0fe68 296 SMART SM00563 84 226 1.9E-15 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LT40_RS14135 dcb8c27617498bf93d7ac43549b0fe68 296 Pfam PF01553 Acyltransferase 72 225 5.4E-14 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LT40_RS14135 dcb8c27617498bf93d7ac43549b0fe68 296 PANTHER PTHR10983 1 293 1.3E-123 T 23-04-2016 LT40_RS14135 dcb8c27617498bf93d7ac43549b0fe68 296 SUPERFAMILY SSF69593 3 285 6.41E-48 T 23-04-2016 LT40_RS14135 dcb8c27617498bf93d7ac43549b0fe68 296 PANTHER PTHR10983:SF15 1 293 1.3E-123 T 23-04-2016 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 Gene3D G3DSA:2.30.40.10 67 142 2.8E-15 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 ProSitePatterns PS00145 Urease active site. 316 332 - T 23-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 Pfam PF00449 Urease alpha-subunit, N-terminal domain 1 118 4.3E-56 T 23-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 PANTHER PTHR22642 23 295 4.2E-262 T 23-04-2016 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 PANTHER PTHR22642 319 500 4.2E-262 T 23-04-2016 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 Pfam PF01979 Amidohydrolase family 124 449 1.5E-80 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 PANTHER PTHR22642:SF7 23 295 4.2E-262 T 23-04-2016 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 PANTHER PTHR22642:SF7 319 500 4.2E-262 T 23-04-2016 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 SUPERFAMILY SSF51556 128 431 4.14E-206 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 SUPERFAMILY SSF51556 480 566 4.14E-206 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 426 439 3.5E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 400 415 3.5E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 294 311 3.5E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 333 349 3.5E-34 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 SUPERFAMILY SSF51338 421 476 1.4E-6 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 566 1.3E-301 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 Gene3D G3DSA:3.20.20.140 143 428 8.1E-217 T 23-04-2016 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 Gene3D G3DSA:3.20.20.140 487 564 8.1E-217 T 23-04-2016 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 SUPERFAMILY SSF51338 2 176 9.63E-63 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 Hamap MF_01953 Urease subunit alpha [ureC]. 1 566 57.697 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13585 214449c25d4041c87e94317b1b9b1b61 566 ProSitePatterns PS01120 Urease nickel ligands signature. 126 139 - T 23-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 SUPERFAMILY SSF64288 59 234 2.2E-44 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 Gene3D G3DSA:1.10.10.10 3 79 2.1E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 Pfam PF07702 UTRA domain 92 229 1.2E-35 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 PANTHER PTHR11751:SF364 4 95 3.6E-47 T 23-04-2016 LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 2.0E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 SMART SM00345 12 71 1.5E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 SUPERFAMILY SSF46785 4 75 1.04E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 7 235 5.6E-104 T 23-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 PANTHER PTHR11751 4 95 3.6E-47 T 23-04-2016 LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 SMART SM00866 92 229 1.4E-35 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LT40_RS14405 6c863a02cb0bc593f1d4dae069382922 236 Gene3D G3DSA:3.40.1410.10 89 225 2.7E-52 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LT40_RS06850 dced6ab146b6ec854ac4a6bfdc6abbef 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 11 35 - T 23-04-2016 IPR001455 TusA-like domain LT40_RS06850 dced6ab146b6ec854ac4a6bfdc6abbef 81 Pfam PF01206 Sulfurtransferase TusA 10 78 3.4E-26 T 23-04-2016 IPR001455 TusA-like domain LT40_RS06850 dced6ab146b6ec854ac4a6bfdc6abbef 81 SUPERFAMILY SSF64307 5 78 1.24E-26 T 23-04-2016 IPR001455 TusA-like domain LT40_RS06850 dced6ab146b6ec854ac4a6bfdc6abbef 81 PANTHER PTHR33279 1 78 2.2E-37 T 23-04-2016 LT40_RS06850 dced6ab146b6ec854ac4a6bfdc6abbef 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 2 80 25.174 T 23-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 LT40_RS06850 dced6ab146b6ec854ac4a6bfdc6abbef 81 PANTHER PTHR33279:SF5 1 78 2.2E-37 T 23-04-2016 LT40_RS06850 dced6ab146b6ec854ac4a6bfdc6abbef 81 Gene3D G3DSA:3.30.110.40 5 79 4.0E-31 T 23-04-2016 IPR001455 TusA-like domain LT40_RS09475 faaf1458d37723b5a6b691cce0179a2e 125 PANTHER PTHR24423 9 125 1.6E-26 T 23-04-2016 LT40_RS09475 faaf1458d37723b5a6b691cce0179a2e 125 Pfam PF00072 Response regulator receiver domain 9 120 1.4E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09475 faaf1458d37723b5a6b691cce0179a2e 125 SUPERFAMILY SSF52172 9 124 1.15E-24 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS09475 faaf1458d37723b5a6b691cce0179a2e 125 SMART SM00448 7 120 1.9E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09475 faaf1458d37723b5a6b691cce0179a2e 125 PANTHER PTHR24423:SF438 9 125 1.6E-26 T 23-04-2016 LT40_RS09475 faaf1458d37723b5a6b691cce0179a2e 125 Gene3D G3DSA:3.40.50.2300 8 124 5.8E-29 T 23-04-2016 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 Gene3D G3DSA:3.50.30.10 308 429 5.9E-30 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 620 638 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 Pfam PF13185 GAF domain 16 154 8.4E-15 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 429 714 5.0E-99 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 620 635 8.5E-24 T 23-04-2016 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 467 486 8.5E-24 T 23-04-2016 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 637 652 8.5E-24 T 23-04-2016 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 673 685 8.5E-24 T 23-04-2016 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 Gene3D G3DSA:1.10.274.10 204 307 1.9E-34 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 PANTHER PTHR22931 200 723 6.9E-278 T 23-04-2016 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 Gene3D G3DSA:3.30.450.40 1 162 1.2E-48 T 23-04-2016 IPR029016 GAF domain-like LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 SUPERFAMILY SSF52009 300 420 1.22E-27 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 SMART SM00065 17 164 1.2E-21 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 Pfam PF00391 PEP-utilising enzyme, mobile domain 327 399 8.6E-16 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 SUPERFAMILY SSF47831 204 316 1.05E-29 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 Gene3D G3DSA:3.20.20.60 430 740 1.6E-104 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 SUPERFAMILY SSF55781 2 158 1.13E-31 T 23-04-2016 IPR029016 GAF domain-like LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 SUPERFAMILY SSF51621 429 715 2.88E-103 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 PANTHER PTHR22931:SF23 200 723 6.9E-278 T 23-04-2016 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 Pfam PF05524 PEP-utilising enzyme, N-terminal 180 301 7.8E-26 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LT40_RS15255 a6b5d44bd933b8de50f5dbfaab0c3892 759 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 179 735 6.0E-134 T 23-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 SUPERFAMILY SSF52172 1035 1155 1.99E-21 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 Gene3D G3DSA:1.10.287.130 790 858 4.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 SMART SM00387 906 1016 1.2E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 SUPERFAMILY SSF55785 627 749 3.81E-9 T 23-04-2016 IPR000014 PAS domain LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 SUPERFAMILY SSF55874 851 1020 5.63E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 907 1015 5.7E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 Pfam PF12860 PAS fold 642 755 4.8E-45 T 23-04-2016 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 Pfam PF00072 Response regulator receiver domain 1038 1149 3.3E-10 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 Gene3D G3DSA:3.30.450.20 627 749 8.0E-14 T 23-04-2016 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PANTHER PTHR24423:SF439 794 1153 2.4E-215 T 23-04-2016 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PANTHER PTHR24423:SF439 634 768 2.4E-215 T 23-04-2016 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PANTHER PTHR24423:SF439 11 63 2.4E-215 T 23-04-2016 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PANTHER PTHR24423:SF439 182 201 2.4E-215 T 23-04-2016 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PANTHER PTHR24423 794 1153 2.4E-215 T 23-04-2016 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PANTHER PTHR24423 634 768 2.4E-215 T 23-04-2016 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PANTHER PTHR24423 11 63 2.4E-215 T 23-04-2016 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PANTHER PTHR24423 182 201 2.4E-215 T 23-04-2016 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 Gene3D G3DSA:3.30.565.10 865 1019 3.2E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 SMART SM00448 1036 1149 3.6E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PRINTS PR00344 Bacterial sensor protein C-terminal signature 941 955 1.3E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PRINTS PR00344 Bacterial sensor protein C-terminal signature 976 994 1.3E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1000 1013 1.3E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 PRINTS PR00344 Bacterial sensor protein C-terminal signature 959 969 1.3E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 SMART SM00388 796 862 9.1E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 SUPERFAMILY SSF47384 779 863 1.77E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 Gene3D G3DSA:3.40.50.2300 1032 1155 1.1E-20 T 23-04-2016 LT40_RS05870 d67a1e64eac19cb3de709bac37f6fb85 1156 Pfam PF00512 His Kinase A (phospho-acceptor) domain 796 862 4.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS07430 44492d629d10dc9cac9dd9f679020387 480 PIRSF PIRSF039117 2 479 1.6E-115 T 23-04-2016 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LT40_RS07430 44492d629d10dc9cac9dd9f679020387 480 SUPERFAMILY SSF52540 238 466 7.34E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07430 44492d629d10dc9cac9dd9f679020387 480 PANTHER PTHR22942:SF38 161 457 7.0E-30 T 23-04-2016 LT40_RS07430 44492d629d10dc9cac9dd9f679020387 480 PANTHER PTHR22942 161 457 7.0E-30 T 23-04-2016 LT40_RS07430 44492d629d10dc9cac9dd9f679020387 480 SMART SM00382 24 185 4.4E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS07430 44492d629d10dc9cac9dd9f679020387 480 SMART SM00382 259 418 4.1 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS07430 44492d629d10dc9cac9dd9f679020387 480 Pfam PF06745 KaiC 242 459 9.7E-30 T 23-04-2016 IPR014774 KaiC-like domain LT40_RS07430 44492d629d10dc9cac9dd9f679020387 480 Pfam PF06745 KaiC 9 224 2.3E-25 T 23-04-2016 IPR014774 KaiC-like domain LT40_RS07430 44492d629d10dc9cac9dd9f679020387 480 SUPERFAMILY SSF52540 2 226 4.84E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07430 44492d629d10dc9cac9dd9f679020387 480 Gene3D G3DSA:3.40.50.300 240 475 1.2E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07430 44492d629d10dc9cac9dd9f679020387 480 Gene3D G3DSA:3.40.50.300 4 226 1.6E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01385 3965cc2e5cdf650cd835a92c01b24c92 232 Pfam PF00106 short chain dehydrogenase 9 176 1.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01385 3965cc2e5cdf650cd835a92c01b24c92 232 PANTHER PTHR24322 147 179 3.7E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01385 3965cc2e5cdf650cd835a92c01b24c92 232 PANTHER PTHR24322 11 131 3.7E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01385 3965cc2e5cdf650cd835a92c01b24c92 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.5E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01385 3965cc2e5cdf650cd835a92c01b24c92 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.5E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01385 3965cc2e5cdf650cd835a92c01b24c92 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.5E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01385 3965cc2e5cdf650cd835a92c01b24c92 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.5E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01385 3965cc2e5cdf650cd835a92c01b24c92 232 Gene3D G3DSA:3.40.50.720 5 215 1.3E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS01385 3965cc2e5cdf650cd835a92c01b24c92 232 PANTHER PTHR24322:SF315 147 179 3.7E-37 T 23-04-2016 LT40_RS01385 3965cc2e5cdf650cd835a92c01b24c92 232 PANTHER PTHR24322:SF315 11 131 3.7E-37 T 23-04-2016 LT40_RS01385 3965cc2e5cdf650cd835a92c01b24c92 232 SUPERFAMILY SSF51735 4 217 3.12E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 Pfam PF04408 Helicase associated domain (HA2) 474 559 1.4E-18 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 Gene3D G3DSA:3.40.50.300 71 228 1.0E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 604 700 4.9E-19 T 23-04-2016 IPR011709 Domain of unknown function DUF1605 LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 PANTHER PTHR18934:SF109 740 868 0.0 T 23-04-2016 LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 PANTHER PTHR18934:SF109 71 705 0.0 T 23-04-2016 LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 SUPERFAMILY SSF52540 74 591 7.47E-104 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 SMART SM00490 311 411 7.6E-15 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 SMART SM00847 471 561 1.4E-35 T 23-04-2016 IPR007502 Helicase-associated domain GO:0004386 LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 12 1299 0.0 T 23-04-2016 IPR010222 RNA helicase HrpA GO:0004004 LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 Pfam PF11898 Domain of unknown function (DUF3418) 713 1299 1.7E-193 T 23-04-2016 IPR024590 RNA helicase HrpA, C-terminal LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 SMART SM00487 69 254 1.0E-25 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 Pfam PF00271 Helicase conserved C-terminal domain 287 410 1.8E-11 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 SMART SM00382 87 391 6.4E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 PANTHER PTHR18934 740 868 0.0 T 23-04-2016 LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 PANTHER PTHR18934 71 705 0.0 T 23-04-2016 LT40_RS05415 275609e59e2a5e83b2da14bc398b1692 1303 Gene3D G3DSA:3.40.50.300 293 423 1.0E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 SMART SM00342 224 307 1.3E-32 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 261 303 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 Gene3D G3DSA:1.10.10.60 261 311 2.6E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 PANTHER PTHR11019:SF25 102 315 8.1E-97 T 23-04-2016 LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 SUPERFAMILY SSF46689 260 311 3.49E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 SUPERFAMILY SSF52317 5 189 5.83E-23 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 Pfam PF12833 Helix-turn-helix domain 230 308 2.1E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 Gene3D G3DSA:3.40.50.880 77 211 2.0E-18 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 Gene3D G3DSA:1.10.10.60 212 260 1.4E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 SUPERFAMILY SSF46689 207 258 1.34E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 PANTHER PTHR11019 102 315 8.1E-97 T 23-04-2016 LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 307 9.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS01080 6c1fa919072529bdbcdda5415b0e4af8 326 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 276 291 9.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS18875 875557d31674807289d49e542e5d72df 254 PANTHER PTHR30336:SF1 1 254 5.4E-46 T 23-04-2016 LT40_RS18875 875557d31674807289d49e542e5d72df 254 Pfam PF02698 DUF218 domain 81 241 8.6E-27 T 23-04-2016 IPR003848 Domain of unknown function DUF218 LT40_RS18875 875557d31674807289d49e542e5d72df 254 PANTHER PTHR30336 1 254 5.4E-46 T 23-04-2016 LT40_RS18875 875557d31674807289d49e542e5d72df 254 Gene3D G3DSA:3.40.50.620 78 213 2.0E-37 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS18810 8de30a3f39c821611a94de43239ab804 367 PANTHER PTHR30474 1 366 7.6E-159 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LT40_RS18810 8de30a3f39c821611a94de43239ab804 367 Pfam PF01098 Cell cycle protein 22 362 1.6E-109 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LT40_RS18810 8de30a3f39c821611a94de43239ab804 367 PANTHER PTHR30474:SF1 1 366 7.6E-159 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 LT40_RS18810 8de30a3f39c821611a94de43239ab804 367 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 14 362 1.6E-132 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 LT40_RS18810 8de30a3f39c821611a94de43239ab804 367 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 319 343 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 PANTHER PTHR10617:SF103 6 285 2.0E-126 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 PANTHER PTHR10617:SF103 328 392 2.0E-126 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 390 3.2E-129 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like LT40_RS17390 d62155a751263395424fba5969e4dc27 392 Pfam PF03486 HI0933-like protein 6 390 3.2E-151 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 PANTHER PTHR10617 6 285 2.0E-126 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 PANTHER PTHR10617 328 392 2.0E-126 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 Gene3D G3DSA:1.10.8.260 269 319 9.2E-9 T 23-04-2016 IPR023166 HI0933 insert-like domain LT40_RS17390 d62155a751263395424fba5969e4dc27 392 SUPERFAMILY SSF160996 190 336 3.92E-38 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 SUPERFAMILY SSF51905 335 392 3.99E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 SUPERFAMILY SSF51905 4 188 3.99E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 9.8E-7 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 345 367 9.8E-7 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 9.8E-7 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 Gene3D G3DSA:3.50.50.60 337 392 7.7E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 Gene3D G3DSA:3.50.50.60 5 186 7.7E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 Gene3D G3DSA:2.40.30.10 188 268 2.4E-30 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 360 367 1.5E-8 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.5E-8 T 23-04-2016 LT40_RS17390 d62155a751263395424fba5969e4dc27 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 1.5E-8 T 23-04-2016 LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 ProSitePatterns PS00042 Crp-type HTH domain signature. 170 193 - T 23-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 SMART SM00100 2 124 5.0E-19 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 Gene3D G3DSA:1.10.10.10 141 209 9.1E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 SMART SM00419 162 210 3.3E-13 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 184 199 1.3E-7 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 168 184 1.3E-7 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 SUPERFAMILY SSF46785 141 209 1.87E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 Pfam PF00027 Cyclic nucleotide-binding domain 22 112 4.6E-20 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 Gene3D G3DSA:2.60.120.10 9 139 2.7E-33 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 PANTHER PTHR24567 9 209 1.7E-102 T 23-04-2016 LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 Pfam PF00325 Bacterial regulatory proteins, crp family 168 198 9.9E-14 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 SUPERFAMILY SSF51206 11 138 1.83E-30 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like LT40_RS18185 0fb11f79f99bd140e6e3de1bfa04753f 212 PANTHER PTHR24567:SF27 9 209 1.7E-102 T 23-04-2016 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 SMART SM00382 150 293 8.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 Gene3D G3DSA:1.10.10.60 414 453 2.7E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 Gene3D G3DSA:1.10.8.60 303 371 4.5E-22 T 23-04-2016 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 343 352 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 Pfam PF02954 Bacterial regulatory protein, Fis family 415 454 6.9E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 Gene3D G3DSA:3.40.50.300 135 302 8.0E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 SUPERFAMILY SSF52172 3 174 1.42E-40 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 421 438 4.8E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 438 458 4.8E-6 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 Pfam PF00158 Sigma-54 interaction domain 137 296 1.3E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 Gene3D G3DSA:3.40.50.2300 2 120 4.0E-34 T 23-04-2016 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 PANTHER PTHR32071:SF21 1 469 1.9E-241 T 23-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 PANTHER PTHR32071 1 469 1.9E-241 T 23-04-2016 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 SMART SM00448 3 114 1.3E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 SUPERFAMILY SSF46689 343 454 2.87E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 SUPERFAMILY SSF52540 132 371 8.63E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 154 167 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS02395 0f5f41877298a88c88409ba1001ae4e3 469 Pfam PF00072 Response regulator receiver domain 5 114 9.5E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS03880 1b74762529a9d37d7617dab36228b1a6 252 Gene3D G3DSA:3.40.1390.30 111 219 1.5E-30 T 23-04-2016 LT40_RS03880 1b74762529a9d37d7617dab36228b1a6 252 SUPERFAMILY SSF102705 5 251 1.83E-77 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LT40_RS03880 1b74762529a9d37d7617dab36228b1a6 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 251 4.2E-62 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LT40_RS03880 1b74762529a9d37d7617dab36228b1a6 252 Gene3D G3DSA:3.40.1390.30 5 110 3.4E-36 T 23-04-2016 LT40_RS03880 1b74762529a9d37d7617dab36228b1a6 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 12 240 7.7E-57 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LT40_RS03880 1b74762529a9d37d7617dab36228b1a6 252 PANTHER PTHR13799 4 247 2.2E-74 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LT40_RS00670 ec21332ae89611254bd83c5e515fa8d5 318 Pfam PF00849 RNA pseudouridylate synthase 104 252 1.3E-31 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00670 ec21332ae89611254bd83c5e515fa8d5 318 PANTHER PTHR11079 7 315 4.0E-137 T 23-04-2016 LT40_RS00670 ec21332ae89611254bd83c5e515fa8d5 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 309 2.1E-76 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00670 ec21332ae89611254bd83c5e515fa8d5 318 PANTHER PTHR11079:SF84 7 315 4.0E-137 T 23-04-2016 LT40_RS00670 ec21332ae89611254bd83c5e515fa8d5 318 SMART SM00363 23 82 1.2E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS00670 ec21332ae89611254bd83c5e515fa8d5 318 Gene3D G3DSA:3.10.290.10 23 71 2.2E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS00670 ec21332ae89611254bd83c5e515fa8d5 318 SUPERFAMILY SSF55120 97 315 8.48E-59 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00670 ec21332ae89611254bd83c5e515fa8d5 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00670 ec21332ae89611254bd83c5e515fa8d5 318 Pfam PF01479 S4 domain 23 69 1.2E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS00670 ec21332ae89611254bd83c5e515fa8d5 318 SUPERFAMILY SSF55174 22 74 1.77E-8 T 23-04-2016 LT40_RS19905 05fe2328075b82d91507b7556e6f3c57 185 PANTHER PTHR22573 5 180 2.6E-57 T 23-04-2016 LT40_RS19905 05fe2328075b82d91507b7556e6f3c57 185 PANTHER PTHR22573:SF56 5 180 2.6E-57 T 23-04-2016 LT40_RS19905 05fe2328075b82d91507b7556e6f3c57 185 Pfam PF00156 Phosphoribosyl transferase domain 20 145 1.1E-22 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LT40_RS19905 05fe2328075b82d91507b7556e6f3c57 185 Gene3D G3DSA:3.40.50.2020 6 183 2.2E-55 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS19905 05fe2328075b82d91507b7556e6f3c57 185 SUPERFAMILY SSF53271 15 183 2.23E-44 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS09690 588853a0d68c180445bebbe8e52a61d2 201 Pfam PF02630 SCO1/SenC 41 175 3.6E-37 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC LT40_RS09690 588853a0d68c180445bebbe8e52a61d2 201 Gene3D G3DSA:3.40.30.10 15 198 1.3E-49 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS09690 588853a0d68c180445bebbe8e52a61d2 201 SUPERFAMILY SSF52833 46 198 4.68E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS09690 588853a0d68c180445bebbe8e52a61d2 201 PANTHER PTHR12151 43 199 9.9E-46 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 Pfam PF01584 CheW-like domain 604 731 1.6E-24 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 Gene3D G3DSA:3.30.565.10 412 597 1.5E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 Gene3D G3DSA:1.20.120.160 6 144 4.3E-44 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 SMART SM01231 350 410 8.2E-19 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 SUPERFAMILY SSF47226 6 127 3.01E-31 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 Gene3D G3DSA:2.40.50.180 622 684 3.7E-14 T 23-04-2016 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 Gene3D G3DSA:1.10.287.560 350 411 1.3E-19 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 576 3.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 3.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 595 3.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 3.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 SMART SM00260 590 729 1.1E-42 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 351 410 6.3E-13 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 458 597 1.6E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 PANTHER PTHR22617:SF6 1 736 5.1E-266 T 23-04-2016 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 Pfam PF01627 Hpt domain 8 100 7.9E-19 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 SUPERFAMILY SSF50341 597 729 1.7E-32 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 Gene3D G3DSA:2.30.30.40 685 728 9.7E-24 T 23-04-2016 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 Gene3D G3DSA:2.30.30.40 598 619 9.7E-24 T 23-04-2016 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 SUPERFAMILY SSF47384 351 411 1.73E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 SUPERFAMILY SSF55874 413 596 6.81E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 PANTHER PTHR22617 1 736 5.1E-266 T 23-04-2016 LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 SMART SM00387 455 598 7.7E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02520 d715dc20d0e8ddbe605834b03d7d7da4 737 SMART SM00073 6 103 8.0E-21 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 126 849 1.5E-153 T 23-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 Gene3D G3DSA:2.40.170.20 253 849 1.7E-110 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 PANTHER PTHR32552:SF18 74 852 1.2E-195 T 23-04-2016 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 PANTHER PTHR32552 74 852 1.2E-195 T 23-04-2016 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 SUPERFAMILY SSF56935 510 848 5.04E-117 T 23-04-2016 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 SUPERFAMILY SSF56935 127 482 5.04E-117 T 23-04-2016 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 125 848 9.9E-123 T 23-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 Pfam PF07660 Secretin and TonB N terminus short domain 67 116 3.4E-10 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 Pfam PF00593 TonB dependent receptor 581 848 2.2E-38 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 Pfam PF07715 TonB-dependent Receptor Plug Domain 140 249 3.0E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 SMART SM00965 66 117 2.4E-14 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 LT40_RS03190 2f56b4dd60e6911769a7028cdd590506 852 Gene3D G3DSA:2.170.130.10 122 252 3.4E-34 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS03155 7e440035958933755868e1325c5e6884 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 67 6.4E-28 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS03155 7e440035958933755868e1325c5e6884 70 PRINTS PR00050 Cold shock protein signature 7 22 2.8E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS03155 7e440035958933755868e1325c5e6884 70 PRINTS PR00050 Cold shock protein signature 42 60 2.8E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS03155 7e440035958933755868e1325c5e6884 70 PRINTS PR00050 Cold shock protein signature 27 36 2.8E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS03155 7e440035958933755868e1325c5e6884 70 PIRSF PIRSF002599 1 70 2.7E-22 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 LT40_RS03155 7e440035958933755868e1325c5e6884 70 SUPERFAMILY SSF50249 2 67 7.35E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS03155 7e440035958933755868e1325c5e6884 70 PANTHER PTHR11544 1 67 2.3E-39 T 23-04-2016 LT40_RS03155 7e440035958933755868e1325c5e6884 70 SMART SM00357 6 69 3.0E-27 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 LT40_RS03155 7e440035958933755868e1325c5e6884 70 PANTHER PTHR11544:SF63 1 67 2.3E-39 T 23-04-2016 LT40_RS03155 7e440035958933755868e1325c5e6884 70 Gene3D G3DSA:2.40.50.140 5 67 2.3E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS03155 7e440035958933755868e1325c5e6884 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 23-04-2016 IPR019844 Cold-shock conserved site LT40_RS03440 3375466afd3e0754c8efee2e8b51745c 277 SMART SM00062 35 264 1.2E-22 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS03440 3375466afd3e0754c8efee2e8b51745c 277 SUPERFAMILY SSF53850 14 261 1.09E-39 T 23-04-2016 LT40_RS03440 3375466afd3e0754c8efee2e8b51745c 277 PANTHER PTHR18966:SF208 31 123 2.7E-12 T 23-04-2016 LT40_RS03440 3375466afd3e0754c8efee2e8b51745c 277 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LT40_RS03440 3375466afd3e0754c8efee2e8b51745c 277 PANTHER PTHR18966 31 123 2.7E-12 T 23-04-2016 LT40_RS03440 3375466afd3e0754c8efee2e8b51745c 277 Gene3D G3DSA:3.40.190.10 24 134 1.4E-25 T 23-04-2016 LT40_RS03440 3375466afd3e0754c8efee2e8b51745c 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 262 8.1E-39 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS03440 3375466afd3e0754c8efee2e8b51745c 277 Gene3D G3DSA:3.40.190.10 135 213 3.1E-6 T 23-04-2016 LT40_RS02365 7354bc67489f2c45fb97ccc890110ca1 116 SUPERFAMILY SSF160214 15 115 6.67E-22 T 23-04-2016 IPR005186 FlaG protein LT40_RS02365 7354bc67489f2c45fb97ccc890110ca1 116 Pfam PF03646 FlaG protein 29 112 3.0E-20 T 23-04-2016 IPR005186 FlaG protein LT40_RS02365 7354bc67489f2c45fb97ccc890110ca1 116 Gene3D G3DSA:3.30.160.170 23 106 2.6E-21 T 23-04-2016 IPR005186 FlaG protein LT40_RS02365 7354bc67489f2c45fb97ccc890110ca1 116 PANTHER PTHR37166:SF1 26 116 3.0E-18 T 23-04-2016 LT40_RS02365 7354bc67489f2c45fb97ccc890110ca1 116 PANTHER PTHR37166 26 116 3.0E-18 T 23-04-2016 LT40_RS17015 174ebf2558dbe41657172df1ff8e8613 270 Pfam PF00005 ABC transporter 32 165 1.8E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS17015 174ebf2558dbe41657172df1ff8e8613 270 Gene3D G3DSA:3.40.50.300 14 216 1.4E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17015 174ebf2558dbe41657172df1ff8e8613 270 PANTHER PTHR24220:SF365 18 270 7.4E-154 T 23-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 LT40_RS17015 174ebf2558dbe41657172df1ff8e8613 270 SUPERFAMILY SSF52540 17 217 3.86E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17015 174ebf2558dbe41657172df1ff8e8613 270 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS17015 174ebf2558dbe41657172df1ff8e8613 270 PANTHER PTHR24220 18 270 7.4E-154 T 23-04-2016 LT40_RS17015 174ebf2558dbe41657172df1ff8e8613 270 SMART SM00382 41 215 4.8E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS06765 d00ad442e21a162dca8e8b6a85a5950a 251 Gene3D G3DSA:3.40.1010.10 1 142 2.8E-32 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LT40_RS06765 d00ad442e21a162dca8e8b6a85a5950a 251 SUPERFAMILY SSF53790 1 249 4.06E-34 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS06765 d00ad442e21a162dca8e8b6a85a5950a 251 Gene3D G3DSA:3.30.950.10 143 250 1.8E-45 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 LT40_RS06765 d00ad442e21a162dca8e8b6a85a5950a 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 223 3.5E-28 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS06765 d00ad442e21a162dca8e8b6a85a5950a 251 TIGRFAM TIGR02434 CobF: precorrin-6A synthase (deacetylating) 2 249 2.5E-94 T 23-04-2016 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376|UniPathway: UPA00148 LT40_RS06765 d00ad442e21a162dca8e8b6a85a5950a 251 PANTHER PTHR10882 3 33 1.9E-26 T 23-04-2016 LT40_RS06765 d00ad442e21a162dca8e8b6a85a5950a 251 PANTHER PTHR10882 57 171 1.9E-26 T 23-04-2016 LT40_RS06765 d00ad442e21a162dca8e8b6a85a5950a 251 PANTHER PTHR10882:SF1 3 33 1.9E-26 T 23-04-2016 LT40_RS06765 d00ad442e21a162dca8e8b6a85a5950a 251 PANTHER PTHR10882:SF1 57 171 1.9E-26 T 23-04-2016 LT40_RS06765 d00ad442e21a162dca8e8b6a85a5950a 251 PIRSF PIRSF036525 1 251 5.7E-100 T 23-04-2016 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376|UniPathway: UPA00148 LT40_RS09275 0f52ee8c291504ab904eefbf4ee205d7 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 23-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LT40_RS09275 0f52ee8c291504ab904eefbf4ee205d7 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 23-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 LT40_RS09275 0f52ee8c291504ab904eefbf4ee205d7 382 SUPERFAMILY SSF51604 95 359 1.3E-79 T 23-04-2016 IPR029065 Enolase C-terminal domain-like LT40_RS09275 0f52ee8c291504ab904eefbf4ee205d7 382 Gene3D G3DSA:3.20.20.120 119 343 5.4E-86 T 23-04-2016 IPR029065 Enolase C-terminal domain-like LT40_RS09275 0f52ee8c291504ab904eefbf4ee205d7 382 PANTHER PTHR13794 1 382 2.1E-143 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LT40_RS09275 0f52ee8c291504ab904eefbf4ee205d7 382 SMART SM00922 125 230 1.2E-22 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LT40_RS09275 0f52ee8c291504ab904eefbf4ee205d7 382 Pfam PF13378 Enolase C-terminal domain-like 129 355 1.9E-63 T 23-04-2016 IPR029065 Enolase C-terminal domain-like LT40_RS09275 0f52ee8c291504ab904eefbf4ee205d7 382 SUPERFAMILY SSF54826 1 112 9.43E-31 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LT40_RS09275 0f52ee8c291504ab904eefbf4ee205d7 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 5.1E-27 T 23-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LT40_RS09275 0f52ee8c291504ab904eefbf4ee205d7 382 PANTHER PTHR13794:SF4 1 382 2.1E-143 T 23-04-2016 LT40_RS09275 0f52ee8c291504ab904eefbf4ee205d7 382 Gene3D G3DSA:3.30.390.10 1 118 8.8E-53 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LT40_RS04130 6041a95b5e0d4545c5be52c3bbdd58ef 285 Gene3D G3DSA:3.30.70.100 179 262 1.1E-23 T 23-04-2016 LT40_RS04130 6041a95b5e0d4545c5be52c3bbdd58ef 285 PANTHER PTHR30221 1 285 4.8E-92 T 23-04-2016 LT40_RS04130 6041a95b5e0d4545c5be52c3bbdd58ef 285 PANTHER PTHR30221:SF7 1 285 4.8E-92 T 23-04-2016 LT40_RS04130 6041a95b5e0d4545c5be52c3bbdd58ef 285 Pfam PF00924 Mechanosensitive ion channel 69 264 8.4E-50 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LT40_RS04130 6041a95b5e0d4545c5be52c3bbdd58ef 285 Gene3D G3DSA:2.30.30.60 126 175 2.1E-19 T 23-04-2016 LT40_RS04130 6041a95b5e0d4545c5be52c3bbdd58ef 285 SUPERFAMILY SSF82861 25 109 4.45E-14 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LT40_RS04130 6041a95b5e0d4545c5be52c3bbdd58ef 285 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 140 174 - T 23-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 LT40_RS04130 6041a95b5e0d4545c5be52c3bbdd58ef 285 Pfam PF05552 Conserved TM helix 17 59 3.2E-7 T 23-04-2016 IPR008910 Conserved TM helix LT40_RS04130 6041a95b5e0d4545c5be52c3bbdd58ef 285 SUPERFAMILY SSF82689 177 275 1.31E-26 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LT40_RS04130 6041a95b5e0d4545c5be52c3bbdd58ef 285 SUPERFAMILY SSF50182 111 175 2.45E-18 T 23-04-2016 IPR010920 LSM domain LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 Gene3D G3DSA:2.40.33.10 75 169 1.0E-26 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 SUPERFAMILY SSF52935 327 479 3.66E-36 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 4 478 8.0E-160 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 Pfam PF00224 Pyruvate kinase, barrel domain 4 342 1.2E-122 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 PANTHER PTHR11817:SF17 1 484 1.3E-281 T 23-04-2016 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 PANTHER PTHR11817 1 484 1.3E-281 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 Gene3D G3DSA:3.20.20.60 4 74 1.0E-94 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 Gene3D G3DSA:3.20.20.60 170 329 1.0E-94 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 Gene3D G3DSA:3.40.1380.20 330 478 1.4E-37 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 SUPERFAMILY SSF50800 72 166 2.44E-24 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 ProSitePatterns PS00110 Pyruvate kinase active site signature. 216 228 - T 23-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 PRINTS PR01050 Pyruvate kinase family signature 317 333 1.8E-50 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 PRINTS PR01050 Pyruvate kinase family signature 61 77 1.8E-50 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 PRINTS PR01050 Pyruvate kinase family signature 221 247 1.8E-50 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 PRINTS PR01050 Pyruvate kinase family signature 273 297 1.8E-50 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 PRINTS PR01050 Pyruvate kinase family signature 188 202 1.8E-50 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 PRINTS PR01050 Pyruvate kinase family signature 298 316 1.8E-50 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 PRINTS PR01050 Pyruvate kinase family signature 248 272 1.8E-50 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 Pfam PF02887 Pyruvate kinase, alpha/beta domain 361 476 1.7E-26 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 SUPERFAMILY SSF51621 169 344 1.61E-91 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS04750 0fa81f2e1de429a7a7d4e9d0d5a58a60 484 SUPERFAMILY SSF51621 2 77 1.61E-91 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 Gene3D G3DSA:3.90.79.10 234 346 1.2E-21 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 Pfam PF14815 NUDIX domain 237 343 5.3E-21 T 23-04-2016 IPR029119 MutY, C-terminal LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 166 6.9E-19 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 277 2.7E-110 T 23-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 SMART SM00478 39 190 6.3E-44 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 Gene3D G3DSA:1.10.1670.10 123 224 9.3E-37 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 Gene3D G3DSA:1.10.340.30 21 122 3.7E-44 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 Pfam PF00633 Helix-hairpin-helix motif 99 128 6.7E-6 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 PANTHER PTHR10359 4 346 5.5E-101 T 23-04-2016 LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 SUPERFAMILY SSF48150 3 225 7.69E-75 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS14905 a71786cf49088ce28363bbc094b71770 354 SUPERFAMILY SSF55811 220 345 3.64E-25 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS11420 afdc6a6be038a8779488d994375cb199 749 Pfam PF06733 DEAD_2 271 391 2.7E-12 T 23-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 LT40_RS11420 afdc6a6be038a8779488d994375cb199 749 SUPERFAMILY SSF52540 195 255 4.33E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11420 afdc6a6be038a8779488d994375cb199 749 SUPERFAMILY SSF52540 516 730 4.33E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11420 afdc6a6be038a8779488d994375cb199 749 SUPERFAMILY SSF52540 318 391 4.33E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11420 afdc6a6be038a8779488d994375cb199 749 Pfam PF13307 Helicase C-terminal domain 586 748 2.9E-31 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LT40_RS11420 afdc6a6be038a8779488d994375cb199 749 SMART SM00491 601 736 2.6E-6 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LT40_RS11420 afdc6a6be038a8779488d994375cb199 749 PANTHER PTHR11472 163 747 1.2E-61 T 23-04-2016 LT40_RS11420 afdc6a6be038a8779488d994375cb199 749 Gene3D G3DSA:3.40.50.300 578 733 8.9E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11420 afdc6a6be038a8779488d994375cb199 749 Gene3D G3DSA:3.40.50.300 178 284 8.5E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11420 afdc6a6be038a8779488d994375cb199 749 Gene3D G3DSA:3.40.50.300 333 400 8.5E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11420 afdc6a6be038a8779488d994375cb199 749 Gene3D G3DSA:3.40.50.300 518 537 8.5E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 6.7E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 6.7E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 Gene3D G3DSA:1.10.10.10 17 81 1.8E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 SUPERFAMILY SSF64288 74 254 4.71E-29 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 SMART SM00345 27 86 1.8E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 PANTHER PTHR11751 21 89 3.8E-17 T 23-04-2016 LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 PANTHER PTHR11751 138 156 3.8E-17 T 23-04-2016 LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 Pfam PF07702 UTRA domain 113 248 2.9E-23 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 86 4.5E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 SUPERFAMILY SSF46785 18 90 2.24E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 Gene3D G3DSA:3.40.1410.10 82 254 2.7E-31 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LT40_RS10460 bbabf3600f8cf3de2b6162992e7979e3 255 SMART SM00866 109 249 6.1E-20 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LT40_RS05520 e4c38bbe3bc758b14820c2b18dd173be 447 Gene3D G3DSA:3.40.50.300 2 218 1.1E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05520 e4c38bbe3bc758b14820c2b18dd173be 447 SMART SM00487 19 221 1.1E-49 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS05520 e4c38bbe3bc758b14820c2b18dd173be 447 Pfam PF00271 Helicase conserved C-terminal domain 234 338 8.1E-28 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05520 e4c38bbe3bc758b14820c2b18dd173be 447 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LT40_RS05520 e4c38bbe3bc758b14820c2b18dd173be 447 PANTHER PTHR24031:SF261 2 368 3.4E-153 T 23-04-2016 LT40_RS05520 e4c38bbe3bc758b14820c2b18dd173be 447 PANTHER PTHR24031 2 368 3.4E-153 T 23-04-2016 LT40_RS05520 e4c38bbe3bc758b14820c2b18dd173be 447 SUPERFAMILY SSF52540 72 359 5.18E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05520 e4c38bbe3bc758b14820c2b18dd173be 447 Gene3D G3DSA:3.40.50.300 219 373 6.5E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05520 e4c38bbe3bc758b14820c2b18dd173be 447 SMART SM00490 257 338 2.3E-31 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05520 e4c38bbe3bc758b14820c2b18dd173be 447 Pfam PF00270 DEAD/DEAH box helicase 24 186 1.1E-46 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS04010 1d18210794b9f2aaefee6b272490dfd7 151 PANTHER PTHR34701 2 151 8.3E-57 T 23-04-2016 LT40_RS04010 1d18210794b9f2aaefee6b272490dfd7 151 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 148 1.5E-43 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LT40_RS04010 1d18210794b9f2aaefee6b272490dfd7 151 SUPERFAMILY SSF89447 2 136 2.24E-42 T 23-04-2016 LT40_RS04010 1d18210794b9f2aaefee6b272490dfd7 151 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 134 4.0E-65 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LT40_RS04010 1d18210794b9f2aaefee6b272490dfd7 151 Pfam PF02381 MraZ protein, putative antitoxin-like 78 132 1.0E-13 T 23-04-2016 IPR020603 MraZ domain LT40_RS04010 1d18210794b9f2aaefee6b272490dfd7 151 Pfam PF02381 MraZ protein, putative antitoxin-like 2 75 5.6E-15 T 23-04-2016 IPR020603 MraZ domain LT40_RS04010 1d18210794b9f2aaefee6b272490dfd7 151 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 151 53.297 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 SMART SM00091 145 211 34.0 T 23-04-2016 IPR000014 PAS domain LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 SMART SM00091 19 88 0.017 T 23-04-2016 IPR000014 PAS domain LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 PANTHER PTHR24422:SF10 6 440 1.2E-112 T 23-04-2016 LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 283 432 2.5E-39 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 PANTHER PTHR24422 6 440 1.2E-112 T 23-04-2016 LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 SUPERFAMILY SSF55785 35 134 1.23E-19 T 23-04-2016 IPR000014 PAS domain LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 SMART SM00283 230 434 1.1E-20 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 Pfam PF00989 PAS fold 37 132 1.7E-13 T 23-04-2016 IPR013767 PAS fold GO:0006355 LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 Gene3D G3DSA:1.10.287.950 253 435 8.3E-46 T 23-04-2016 LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 Pfam PF08447 PAS fold 166 252 1.6E-10 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 SMART SM00086 216 258 7.2 T 23-04-2016 IPR001610 PAC motif LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 SMART SM00086 94 136 0.0034 T 23-04-2016 IPR001610 PAC motif LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 SUPERFAMILY SSF55785 154 258 8.03E-19 T 23-04-2016 IPR000014 PAS domain LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 SUPERFAMILY SSF58104 247 435 7.19E-54 T 23-04-2016 LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 Gene3D G3DSA:3.30.450.20 36 134 7.2E-22 T 23-04-2016 LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 Gene3D G3DSA:3.30.450.20 154 252 1.7E-16 T 23-04-2016 LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 149 262 1.6E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS20510 3ead163f0f219b2e15f088a1c45b8a5f 441 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 37 142 2.9E-14 T 23-04-2016 IPR000014 PAS domain LT40_RS15150 970ae9b5a293a34dea1654bea123e857 96 SUPERFAMILY SSF47413 8 90 1.41E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS15150 970ae9b5a293a34dea1654bea123e857 96 PANTHER PTHR36924:SF2 1 86 1.3E-19 T 23-04-2016 LT40_RS15150 970ae9b5a293a34dea1654bea123e857 96 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 83 3.6E-29 T 23-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 LT40_RS15150 970ae9b5a293a34dea1654bea123e857 96 SMART SM00530 13 69 2.9E-4 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS15150 970ae9b5a293a34dea1654bea123e857 96 Gene3D G3DSA:1.10.260.40 1 91 3.1E-32 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS15150 970ae9b5a293a34dea1654bea123e857 96 PANTHER PTHR36924 1 86 1.3E-19 T 23-04-2016 LT40_RS15150 970ae9b5a293a34dea1654bea123e857 96 Pfam PF01381 Helix-turn-helix 20 60 2.9E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS06000 cfb51ec02788f04c4439a1facb52a00e 314 Pfam PF01882 Protein of unknown function DUF58 52 136 3.9E-20 T 23-04-2016 IPR002881 Domain of unknown function DUF58 LT40_RS06000 cfb51ec02788f04c4439a1facb52a00e 314 PANTHER PTHR33608:SF6 10 314 3.9E-114 T 23-04-2016 LT40_RS06000 cfb51ec02788f04c4439a1facb52a00e 314 PANTHER PTHR33608 10 314 3.9E-114 T 23-04-2016 LT40_RS04960 045526048511f46ca9980d455f217d76 151 Pfam PF03061 Thioesterase superfamily 24 107 2.0E-16 T 23-04-2016 IPR006683 Thioesterase domain LT40_RS04960 045526048511f46ca9980d455f217d76 151 SUPERFAMILY SSF54637 9 138 1.22E-41 T 23-04-2016 IPR029069 HotDog domain LT40_RS04960 045526048511f46ca9980d455f217d76 151 PANTHER PTHR31793 8 139 3.2E-49 T 23-04-2016 LT40_RS04960 045526048511f46ca9980d455f217d76 151 PANTHER PTHR31793:SF9 8 139 3.2E-49 T 23-04-2016 LT40_RS04960 045526048511f46ca9980d455f217d76 151 PIRSF PIRSF003230 2 142 1.8E-46 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LT40_RS04960 045526048511f46ca9980d455f217d76 151 Gene3D G3DSA:3.10.129.10 9 139 1.4E-48 T 23-04-2016 IPR029069 HotDog domain LT40_RS04960 045526048511f46ca9980d455f217d76 151 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 10 135 1.0E-49 T 23-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- LT40_RS04960 045526048511f46ca9980d455f217d76 151 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 14 130 2.8E-34 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 Gene3D G3DSA:1.10.275.10 8 112 2.0E-42 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PANTHER PTHR11444:SF3 7 461 5.9E-235 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 SUPERFAMILY SSF48557 10 461 7.07E-155 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 TIGRFAM TIGR00838 argH: argininosuccinate lyase 10 459 4.1E-192 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PANTHER PTHR11444 7 461 5.9E-235 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PRINTS PR00145 Argininosuccinate lyase family signature 199 215 8.2E-71 T 23-04-2016 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PRINTS PR00145 Argininosuccinate lyase family signature 281 297 8.2E-71 T 23-04-2016 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PRINTS PR00145 Argininosuccinate lyase family signature 237 261 8.2E-71 T 23-04-2016 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PRINTS PR00145 Argininosuccinate lyase family signature 107 129 8.2E-71 T 23-04-2016 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PRINTS PR00145 Argininosuccinate lyase family signature 148 168 8.2E-71 T 23-04-2016 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 335 8.2E-71 T 23-04-2016 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 Gene3D G3DSA:1.20.200.10 113 380 4.2E-107 T 23-04-2016 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 Hamap MF_00006 Argininosuccinate lyase [argH]. 8 459 43.655 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 ProSitePatterns PS00163 Fumarate lyases signature. 281 290 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 Pfam PF00206 Lyase 12 306 6.4E-78 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 6.1E-31 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PRINTS PR00149 Fumarate lyase superfamily signature 281 297 6.1E-31 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PRINTS PR00149 Fumarate lyase superfamily signature 108 126 6.1E-31 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 6.1E-31 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 Pfam PF14698 Argininosuccinate lyase C-terminal 369 437 2.7E-25 T 23-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS16760 5afe0eb662eb0ff7edd95e4367bda46a 464 Gene3D G3DSA:1.10.40.30 381 438 1.3E-30 T 23-04-2016 LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 169 1.6E-30 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 PANTHER PTHR11649 7 300 5.1E-119 T 23-04-2016 LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 Gene3D G3DSA:3.30.300.20 195 294 4.4E-40 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 280 1.4E-100 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 61 76 9.9E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 9.9E-7 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 Pfam PF07650 KH domain 210 285 5.6E-21 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 Pfam PF01926 50S ribosome-binding GTPase 12 126 9.0E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 Gene3D G3DSA:3.40.50.300 11 194 6.5E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 Hamap MF_00367 GTPase Era [era]. 7 297 36.325 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 PANTHER PTHR11649:SF3 7 300 5.1E-119 T 23-04-2016 LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 SUPERFAMILY SSF52540 12 205 2.47E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04645 3bb716d6ea120b6440b54952c691a0db 300 SUPERFAMILY SSF54814 183 298 1.83E-42 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LT40_RS00555 c920c563a82313d845df465fca4d71ff 223 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 14 223 38.645 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LT40_RS00555 c920c563a82313d845df465fca4d71ff 223 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 144 159 - T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LT40_RS00555 c920c563a82313d845df465fca4d71ff 223 PANTHER PTHR11579 10 219 1.2E-86 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LT40_RS00555 c920c563a82313d845df465fca4d71ff 223 Gene3D G3DSA:3.40.50.150 29 219 4.7E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS00555 c920c563a82313d845df465fca4d71ff 223 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 14 220 9.0E-70 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LT40_RS00555 c920c563a82313d845df465fca4d71ff 223 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 19 218 2.7E-65 T 23-04-2016 LT40_RS00555 c920c563a82313d845df465fca4d71ff 223 SUPERFAMILY SSF53335 20 219 1.37E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08305 b97de39330500c8c30d927f6394eb6e3 720 Pfam PF00668 Condensation domain 281 574 2.9E-37 T 23-04-2016 IPR001242 Condensation domain LT40_RS08305 b97de39330500c8c30d927f6394eb6e3 720 PANTHER PTHR24095:SF137 200 666 8.5E-40 T 23-04-2016 LT40_RS08305 b97de39330500c8c30d927f6394eb6e3 720 SUPERFAMILY SSF52777 14 165 2.96E-11 T 23-04-2016 LT40_RS08305 b97de39330500c8c30d927f6394eb6e3 720 ProSitePatterns PS00012 Phosphopantetheine attachment site. 219 234 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site LT40_RS08305 b97de39330500c8c30d927f6394eb6e3 720 PANTHER PTHR24095 200 666 8.5E-40 T 23-04-2016 LT40_RS08305 b97de39330500c8c30d927f6394eb6e3 720 Pfam PF00550 Phosphopantetheine attachment site 203 257 5.6E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS08305 b97de39330500c8c30d927f6394eb6e3 720 Gene3D G3DSA:1.10.1200.10 189 261 2.4E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS08305 b97de39330500c8c30d927f6394eb6e3 720 SUPERFAMILY SSF47336 192 257 4.71E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS08305 b97de39330500c8c30d927f6394eb6e3 720 SUPERFAMILY SSF52777 280 472 3.48E-32 T 23-04-2016 LT40_RS08305 b97de39330500c8c30d927f6394eb6e3 720 SUPERFAMILY SSF52777 461 709 4.11E-37 T 23-04-2016 LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 411 5.7E-185 T 23-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 PANTHER PTHR23151:SF47 3 412 6.7E-233 T 23-04-2016 LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 SUPERFAMILY SSF47005 110 154 9.68E-12 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 SUPERFAMILY SSF51230 1 96 3.53E-25 T 23-04-2016 IPR011053 Single hybrid motif LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 Pfam PF00364 Biotin-requiring enzyme 4 76 1.5E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 180 410 8.5E-82 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 Pfam PF02817 e3 binding domain 119 149 9.5E-15 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 SUPERFAMILY SSF52777 170 410 1.91E-89 T 23-04-2016 LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 PANTHER PTHR23151 3 412 6.7E-233 T 23-04-2016 LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 Gene3D G3DSA:4.10.320.10 118 161 2.9E-18 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 Gene3D G3DSA:3.30.559.10 173 410 6.9E-94 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain LT40_RS12575 1f661921695e1607470d3d4a925ae244 412 Gene3D G3DSA:2.40.50.100 1 96 5.0E-26 T 23-04-2016 LT40_RS12625 969ec5e69e872a6d391f47e9ce613d54 479 SMART SM00345 10 69 1.1E-21 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS12625 969ec5e69e872a6d391f47e9ce613d54 479 Gene3D G3DSA:1.10.10.10 6 74 1.7E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12625 969ec5e69e872a6d391f47e9ce613d54 479 Gene3D G3DSA:3.90.1150.10 350 452 1.2E-5 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS12625 969ec5e69e872a6d391f47e9ce613d54 479 SUPERFAMILY SSF53383 94 470 4.03E-89 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS12625 969ec5e69e872a6d391f47e9ce613d54 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 6.4E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS12625 969ec5e69e872a6d391f47e9ce613d54 479 PANTHER PTHR11751 88 470 1.1E-166 T 23-04-2016 LT40_RS12625 969ec5e69e872a6d391f47e9ce613d54 479 PANTHER PTHR11751:SF314 88 470 1.1E-166 T 23-04-2016 LT40_RS12625 969ec5e69e872a6d391f47e9ce613d54 479 Pfam PF00155 Aminotransferase class I and II 138 451 3.5E-24 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS12625 969ec5e69e872a6d391f47e9ce613d54 479 SUPERFAMILY SSF46785 4 73 2.57E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12625 969ec5e69e872a6d391f47e9ce613d54 479 Gene3D G3DSA:3.40.640.10 140 349 1.0E-61 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS09285 533e46d949b5cabd2080a6633e26b9c8 263 Gene3D G3DSA:1.10.10.10 9 78 1.4E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09285 533e46d949b5cabd2080a6633e26b9c8 263 SMART SM00346 13 100 7.0E-18 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS09285 533e46d949b5cabd2080a6633e26b9c8 263 PANTHER PTHR30136 8 262 1.3E-48 T 23-04-2016 LT40_RS09285 533e46d949b5cabd2080a6633e26b9c8 263 SUPERFAMILY SSF55781 69 260 2.81E-40 T 23-04-2016 IPR029016 GAF domain-like LT40_RS09285 533e46d949b5cabd2080a6633e26b9c8 263 Pfam PF01614 Bacterial transcriptional regulator 130 257 3.7E-18 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal LT40_RS09285 533e46d949b5cabd2080a6633e26b9c8 263 SUPERFAMILY SSF46785 14 83 5.92E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09285 533e46d949b5cabd2080a6633e26b9c8 263 Pfam PF09339 IclR helix-turn-helix domain 16 61 1.1E-11 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS09285 533e46d949b5cabd2080a6633e26b9c8 263 Gene3D G3DSA:3.30.450.40 79 261 1.3E-52 T 23-04-2016 IPR029016 GAF domain-like LT40_RS17165 0ed5d376b008296d2ff9d2deb9cbb0ce 127 PANTHER PTHR12418 1 126 1.3E-33 T 23-04-2016 LT40_RS17165 0ed5d376b008296d2ff9d2deb9cbb0ce 127 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 13 125 3.7E-25 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain LT40_RS17165 0ed5d376b008296d2ff9d2deb9cbb0ce 127 PANTHER PTHR12418:SF27 1 126 1.3E-33 T 23-04-2016 LT40_RS17165 0ed5d376b008296d2ff9d2deb9cbb0ce 127 Pfam PF03061 Thioesterase superfamily 43 114 3.6E-20 T 23-04-2016 IPR006683 Thioesterase domain LT40_RS17165 0ed5d376b008296d2ff9d2deb9cbb0ce 127 SUPERFAMILY SSF54637 9 127 1.26E-33 T 23-04-2016 IPR029069 HotDog domain LT40_RS17165 0ed5d376b008296d2ff9d2deb9cbb0ce 127 Gene3D G3DSA:3.10.129.10 5 127 2.8E-38 T 23-04-2016 IPR029069 HotDog domain LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 SUPERFAMILY SSF52777 4 179 1.22E-16 T 23-04-2016 LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 SUPERFAMILY SSF52777 187 434 2.89E-36 T 23-04-2016 LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 Pfam PF13193 AMP-binding enzyme C-terminal domain 1289 1365 8.0E-7 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1023 1034 - T 23-04-2016 IPR020845 AMP-binding, conserved site LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 SUPERFAMILY SSF56801 884 1402 3.14E-120 T 23-04-2016 LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 PANTHER PTHR24095 409 1390 3.3E-136 T 23-04-2016 LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 Gene3D G3DSA:3.30.300.30 1277 1402 1.5E-21 T 23-04-2016 LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 Gene3D G3DSA:3.40.50.980 884 1032 5.5E-31 T 23-04-2016 LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 Gene3D G3DSA:2.30.38.10 1192 1269 3.3E-15 T 23-04-2016 LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 SUPERFAMILY SSF52777 615 838 4.23E-23 T 23-04-2016 LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 898 1304 5.1E-104 T 23-04-2016 IPR010071 Amino acid adenylation domain LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 SUPERFAMILY SSF52777 441 624 1.33E-19 T 23-04-2016 LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 Gene3D G3DSA:3.40.50.980 1033 1191 8.2E-38 T 23-04-2016 LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 PANTHER PTHR24095:SF137 409 1390 3.3E-136 T 23-04-2016 LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 Pfam PF08415 Nonribosomal peptide synthase 322 380 1.4E-14 T 23-04-2016 IPR013624 Non-ribosomal peptide synthetase LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 Pfam PF08415 Nonribosomal peptide synthase 742 794 3.3E-7 T 23-04-2016 IPR013624 Non-ribosomal peptide synthetase LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 Pfam PF00668 Condensation domain 442 699 2.2E-22 T 23-04-2016 IPR001242 Condensation domain LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 Pfam PF00668 Condensation domain 3 299 9.3E-26 T 23-04-2016 IPR001242 Condensation domain LT40_RS08315 17a507f54e7b1bf8d60fc4528ffec86d 1467 Pfam PF00501 AMP-binding enzyme 886 1280 4.3E-78 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LT40_RS05040 5b7eabd837b2a056ada9dbf484619ef4 160 Pfam PF00255 Glutathione peroxidase 8 112 7.3E-39 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LT40_RS05040 5b7eabd837b2a056ada9dbf484619ef4 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 23-04-2016 IPR029760 Glutathione peroxidase conserved site LT40_RS05040 5b7eabd837b2a056ada9dbf484619ef4 160 PIRSF PIRSF000303 1 160 2.5E-60 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LT40_RS05040 5b7eabd837b2a056ada9dbf484619ef4 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 23-04-2016 IPR029759 Glutathione peroxidase active site LT40_RS05040 5b7eabd837b2a056ada9dbf484619ef4 160 Gene3D G3DSA:3.40.30.10 5 159 2.1E-63 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS05040 5b7eabd837b2a056ada9dbf484619ef4 160 PRINTS PR01011 Glutathione peroxidase family signature 124 133 3.8E-21 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LT40_RS05040 5b7eabd837b2a056ada9dbf484619ef4 160 PRINTS PR01011 Glutathione peroxidase family signature 23 40 3.8E-21 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LT40_RS05040 5b7eabd837b2a056ada9dbf484619ef4 160 PRINTS PR01011 Glutathione peroxidase family signature 58 74 3.8E-21 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LT40_RS05040 5b7eabd837b2a056ada9dbf484619ef4 160 SUPERFAMILY SSF52833 5 159 3.86E-54 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS05040 5b7eabd837b2a056ada9dbf484619ef4 160 PANTHER PTHR11592 1 159 1.7E-74 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 Pfam PF02272 DHHA1 domain 800 866 4.6E-14 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 853 0.0 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 Pfam PF01411 tRNA synthetases class II (A) 5 552 2.6E-221 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.1E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 304 317 1.1E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 1.1E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 280 296 1.1E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 1.1E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 PANTHER PTHR11777:SF9 1 873 0.0 T 23-04-2016 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 SUPERFAMILY SSF50447 452 550 1.27E-17 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 651 695 3.0E-15 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 SUPERFAMILY SSF55186 550 711 8.24E-51 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 Gene3D G3DSA:3.30.930.10 1 249 5.3E-124 T 23-04-2016 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 202.075 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 SUPERFAMILY SSF55681 2 253 3.48E-105 T 23-04-2016 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 SUPERFAMILY SSF101353 254 461 3.14E-60 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 SMART SM00863 651 695 4.9E-19 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LT40_RS01130 61cf8f081c460336cb4416762bd20e62 874 PANTHER PTHR11777 1 873 0.0 T 23-04-2016 LT40_RS01960 060d2f46c08a53c67ece5bcf2b114538 408 Gene3D G3DSA:1.20.1600.10 108 195 9.2E-4 T 23-04-2016 LT40_RS01960 060d2f46c08a53c67ece5bcf2b114538 408 Gene3D G3DSA:2.40.50.100 71 104 4.1E-16 T 23-04-2016 LT40_RS01960 060d2f46c08a53c67ece5bcf2b114538 408 Gene3D G3DSA:2.40.50.100 225 258 4.1E-16 T 23-04-2016 LT40_RS01960 060d2f46c08a53c67ece5bcf2b114538 408 PANTHER PTHR30386 1 386 9.2E-163 T 23-04-2016 LT40_RS01960 060d2f46c08a53c67ece5bcf2b114538 408 Pfam PF00529 HlyD membrane-fusion protein of T1SS 52 356 8.4E-14 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LT40_RS01960 060d2f46c08a53c67ece5bcf2b114538 408 SUPERFAMILY SSF111369 70 119 1.83E-12 T 23-04-2016 LT40_RS01960 060d2f46c08a53c67ece5bcf2b114538 408 SUPERFAMILY SSF111369 148 171 1.83E-12 T 23-04-2016 LT40_RS01960 060d2f46c08a53c67ece5bcf2b114538 408 SUPERFAMILY SSF111369 204 278 1.83E-12 T 23-04-2016 LT40_RS01960 060d2f46c08a53c67ece5bcf2b114538 408 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 301 3.5E-17 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LT40_RS01960 060d2f46c08a53c67ece5bcf2b114538 408 PANTHER PTHR30386:SF6 1 386 9.2E-163 T 23-04-2016 LT40_RS15075 3ddf51e17738a9a66a129b2f12254723 284 PANTHER PTHR30579:SF6 2 283 7.9E-137 T 23-04-2016 LT40_RS15075 3ddf51e17738a9a66a129b2f12254723 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 2.5E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15075 3ddf51e17738a9a66a129b2f12254723 284 Gene3D G3DSA:1.10.10.10 8 91 9.6E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15075 3ddf51e17738a9a66a129b2f12254723 284 Pfam PF03466 LysR substrate binding domain 96 282 1.2E-21 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS15075 3ddf51e17738a9a66a129b2f12254723 284 Gene3D G3DSA:3.40.190.10 95 219 1.8E-17 T 23-04-2016 LT40_RS15075 3ddf51e17738a9a66a129b2f12254723 284 SUPERFAMILY SSF46785 7 115 2.93E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15075 3ddf51e17738a9a66a129b2f12254723 284 SUPERFAMILY SSF53850 95 283 2.71E-24 T 23-04-2016 LT40_RS15075 3ddf51e17738a9a66a129b2f12254723 284 PANTHER PTHR30579 2 283 7.9E-137 T 23-04-2016 LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 Pfam PF10415 Fumarase C C-terminus 413 465 5.7E-20 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 PANTHER PTHR11444 1 468 1.1E-266 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 Gene3D G3DSA:1.10.40.30 423 468 7.4E-21 T 23-04-2016 LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 ProSitePatterns PS00163 Fumarate lyases signature. 322 331 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 Gene3D G3DSA:1.10.275.10 6 143 6.1E-55 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 PANTHER PTHR11444:SF25 1 468 1.1E-266 T 23-04-2016 LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 Pfam PF00206 Lyase 16 347 2.4E-112 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 SUPERFAMILY SSF48557 7 465 1.4E-143 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 1.3E-28 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 PRINTS PR00149 Fumarate lyase superfamily signature 276 303 1.3E-28 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 PRINTS PR00149 Fumarate lyase superfamily signature 322 338 1.3E-28 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 1.3E-28 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS16310 aa0915b02728ae469ddb8f91fb8dc9a9 474 Gene3D G3DSA:1.20.200.10 144 422 2.7E-88 T 23-04-2016 LT40_RS14005 e167129ba43e8f5f3cc638d97aa45802 485 Gene3D G3DSA:1.20.1600.10 32 445 4.0E-84 T 23-04-2016 LT40_RS14005 e167129ba43e8f5f3cc638d97aa45802 485 SUPERFAMILY SSF56954 37 456 1.31E-91 T 23-04-2016 LT40_RS14005 e167129ba43e8f5f3cc638d97aa45802 485 PANTHER PTHR30026 22 466 1.7E-120 T 23-04-2016 LT40_RS14005 e167129ba43e8f5f3cc638d97aa45802 485 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 35 457 1.6E-124 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LT40_RS14005 e167129ba43e8f5f3cc638d97aa45802 485 PANTHER PTHR30026:SF3 22 466 1.7E-120 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LT40_RS14005 e167129ba43e8f5f3cc638d97aa45802 485 Pfam PF02321 Outer membrane efflux protein 40 223 6.4E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS14005 e167129ba43e8f5f3cc638d97aa45802 485 Pfam PF02321 Outer membrane efflux protein 248 442 1.2E-30 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS12135 aa4c015eee8a52e7a1c0d357a5ad2aaf 172 Gene3D G3DSA:1.10.10.10 22 76 7.8E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12135 aa4c015eee8a52e7a1c0d357a5ad2aaf 172 Pfam PF16220 Domain of unknown function (DUF4880) 85 123 3.3E-10 T 23-04-2016 IPR032623 FecR, N-terminal LT40_RS12135 aa4c015eee8a52e7a1c0d357a5ad2aaf 172 SUPERFAMILY SSF88659 18 77 2.83E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS12135 aa4c015eee8a52e7a1c0d357a5ad2aaf 172 Pfam PF08281 Sigma-70, region 4 22 74 1.1E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS12870 d358aab9a1d59c64543e194b27cb8001 89 Pfam PF00312 Ribosomal protein S15 8 88 3.4E-35 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS12870 d358aab9a1d59c64543e194b27cb8001 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.554 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 LT40_RS12870 d358aab9a1d59c64543e194b27cb8001 89 SUPERFAMILY SSF47060 3 89 3.24E-33 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 LT40_RS12870 d358aab9a1d59c64543e194b27cb8001 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 1.1E-36 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 LT40_RS12870 d358aab9a1d59c64543e194b27cb8001 89 Gene3D G3DSA:1.10.287.10 3 89 1.9E-36 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 LT40_RS12870 d358aab9a1d59c64543e194b27cb8001 89 SMART SM01387 8 88 2.2E-48 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS12870 d358aab9a1d59c64543e194b27cb8001 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS12870 d358aab9a1d59c64543e194b27cb8001 89 PANTHER PTHR23321 1 89 6.0E-43 T 23-04-2016 LT40_RS12870 d358aab9a1d59c64543e194b27cb8001 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 9.0E-38 T 23-04-2016 LT40_RS17005 ffff66d9dbb8e5afe544aec552716935 382 SUPERFAMILY SSF51679 3 349 8.24E-97 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS17005 ffff66d9dbb8e5afe544aec552716935 382 Gene3D G3DSA:3.20.20.30 3 253 1.7E-102 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS17005 ffff66d9dbb8e5afe544aec552716935 382 Gene3D G3DSA:3.20.20.30 287 350 1.7E-102 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS17005 ffff66d9dbb8e5afe544aec552716935 382 Pfam PF00296 Luciferase-like monooxygenase 4 325 4.6E-86 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS17005 ffff66d9dbb8e5afe544aec552716935 382 PANTHER PTHR30011 1 377 7.0E-219 T 23-04-2016 LT40_RS17005 ffff66d9dbb8e5afe544aec552716935 382 PANTHER PTHR30011:SF1 1 377 7.0E-219 T 23-04-2016 LT40_RS17005 ffff66d9dbb8e5afe544aec552716935 382 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 71.371 T 23-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 LT40_RS17005 ffff66d9dbb8e5afe544aec552716935 382 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 3.9E-193 T 23-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 SUPERFAMILY SSF51215 31 146 9.68E-8 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 SMART SM00342 210 293 1.4E-27 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 SUPERFAMILY SSF46689 246 295 1.86E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 Gene3D G3DSA:1.10.10.60 247 295 4.4E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 SUPERFAMILY SSF46689 194 241 4.66E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 Gene3D G3DSA:2.60.120.280 31 130 9.1E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 Pfam PF12833 Helix-turn-helix domain 216 294 1.3E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 Gene3D G3DSA:1.10.10.60 193 246 7.4E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 289 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 Pfam PF02311 AraC-like ligand binding domain 30 83 6.5E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 PANTHER PTHR11019 31 294 1.4E-41 T 23-04-2016 LT40_RS10605 3e179605eb28d4177be65c0b0980e0bb 298 PANTHER PTHR11019:SF123 31 294 1.4E-41 T 23-04-2016 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 SUPERFAMILY SSF51569 5 321 2.78E-127 T 23-04-2016 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 PANTHER PTHR11458 9 324 1.5E-207 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 Gene3D G3DSA:3.20.20.70 4 321 4.9E-133 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 PANTHER PTHR11458:SF1 9 324 1.5E-207 T 23-04-2016 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 PIRSF PIRSF001415 1 323 1.4E-138 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 8 321 7.0E-131 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 1.2E-53 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 267 282 1.2E-53 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 191 210 1.2E-53 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 297 316 1.2E-53 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 242 258 1.2E-53 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 123 137 1.2E-53 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 SMART SM01004 5 323 2.0E-201 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS10995 48cb3a6c3b32cb318f8c20f4b6f85472 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 242 254 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS09955 e86fefcea5b4d837d6fe6a048c55e577 428 PANTHER PTHR11662 9 401 7.2E-146 T 23-04-2016 LT40_RS09955 e86fefcea5b4d837d6fe6a048c55e577 428 Pfam PF07690 Major Facilitator Superfamily 17 366 7.1E-61 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS09955 e86fefcea5b4d837d6fe6a048c55e577 428 Gene3D G3DSA:1.20.1250.20 225 407 2.6E-30 T 23-04-2016 LT40_RS09955 e86fefcea5b4d837d6fe6a048c55e577 428 PIRSF PIRSF002808 2 415 1.4E-36 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LT40_RS09955 e86fefcea5b4d837d6fe6a048c55e577 428 PANTHER PTHR11662:SF250 9 401 7.2E-146 T 23-04-2016 LT40_RS09955 e86fefcea5b4d837d6fe6a048c55e577 428 Gene3D G3DSA:1.20.1250.20 11 201 1.4E-51 T 23-04-2016 LT40_RS09955 e86fefcea5b4d837d6fe6a048c55e577 428 SUPERFAMILY SSF103473 4 410 6.02E-89 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 SUPERFAMILY SSF56024 288 476 1.1E-30 T 23-04-2016 LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 SUPERFAMILY SSF56024 47 244 8.63E-46 T 23-04-2016 LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 PANTHER PTHR21248:SF12 276 397 1.3E-160 T 23-04-2016 LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 PANTHER PTHR21248:SF12 413 504 1.3E-160 T 23-04-2016 LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 PANTHER PTHR21248:SF12 12 257 1.3E-160 T 23-04-2016 LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 Gene3D G3DSA:3.30.870.10 283 478 4.7E-35 T 23-04-2016 LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 SMART SM00155 168 195 6.9E-5 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 SMART SM00155 412 439 1.1E-5 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 Gene3D G3DSA:3.30.870.10 54 237 1.1E-41 T 23-04-2016 LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 Pfam PF13091 PLD-like domain 75 227 4.7E-26 T 23-04-2016 IPR025202 Phospholipase D-like domain LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 Pfam PF13091 PLD-like domain 323 461 6.5E-17 T 23-04-2016 IPR025202 Phospholipase D-like domain LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 PANTHER PTHR21248 276 397 1.3E-160 T 23-04-2016 LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 PANTHER PTHR21248 413 504 1.3E-160 T 23-04-2016 LT40_RS16570 6aab9c375c551a3715b1ce53fbc54c86 520 PANTHER PTHR21248 12 257 1.3E-160 T 23-04-2016 LT40_RS20090 c4c148f4225e2491b77366eb64de611f 150 Gene3D G3DSA:3.40.50.360 1 149 2.2E-28 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS20090 c4c148f4225e2491b77366eb64de611f 150 PANTHER PTHR19384:SF81 1 150 8.9E-18 T 23-04-2016 LT40_RS20090 c4c148f4225e2491b77366eb64de611f 150 SUPERFAMILY SSF52218 1 148 5.1E-31 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS20090 c4c148f4225e2491b77366eb64de611f 150 Pfam PF00258 Flavodoxin 5 140 2.5E-16 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LT40_RS20090 c4c148f4225e2491b77366eb64de611f 150 PANTHER PTHR19384 1 150 8.9E-18 T 23-04-2016 LT40_RS13255 7041115ea3ccbca69a3d9c130e01f6f9 196 Gene3D G3DSA:3.30.70.240 127 193 4.1E-15 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain LT40_RS13255 7041115ea3ccbca69a3d9c130e01f6f9 196 SUPERFAMILY SSF54211 8 120 3.07E-37 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS13255 7041115ea3ccbca69a3d9c130e01f6f9 196 SUPERFAMILY SSF54980 127 192 6.55E-9 T 23-04-2016 IPR009022 Elongation factor G, III-V domain LT40_RS13255 7041115ea3ccbca69a3d9c130e01f6f9 196 Gene3D G3DSA:3.30.230.30 7 120 1.8E-43 T 23-04-2016 IPR001498 Impact, N-terminal LT40_RS13255 7041115ea3ccbca69a3d9c130e01f6f9 196 Pfam PF01205 Uncharacterized protein family UPF0029 16 116 5.1E-28 T 23-04-2016 IPR001498 Impact, N-terminal LT40_RS13255 7041115ea3ccbca69a3d9c130e01f6f9 196 Pfam PF09186 Domain of unknown function (DUF1949) 132 188 1.8E-8 T 23-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal LT40_RS13255 7041115ea3ccbca69a3d9c130e01f6f9 196 PANTHER PTHR16301 4 194 5.9E-52 T 23-04-2016 IPR023582 Impact family LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 507 1.2E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 Gene3D G3DSA:3.30.450.20 154 284 7.6E-23 T 23-04-2016 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 159 245 2.1E-14 T 23-04-2016 IPR000014 PAS domain LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 Pfam PF00072 Response regulator receiver domain 530 635 4.0E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 SMART SM00448 528 638 5.5E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 Gene3D G3DSA:3.40.50.2300 529 641 8.2E-25 T 23-04-2016 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 PANTHER PTHR24423 10 128 7.8E-171 T 23-04-2016 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 PANTHER PTHR24423 148 638 7.8E-171 T 23-04-2016 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 PANTHER PTHR24423:SF438 148 638 7.8E-171 T 23-04-2016 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 SUPERFAMILY SSF55874 336 507 1.02E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 SUPERFAMILY SSF47384 271 343 2.35E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 451 5.3E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 5.3E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 505 5.3E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 465 5.3E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 SUPERFAMILY SSF55785 159 259 5.8E-21 T 23-04-2016 IPR000014 PAS domain LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 SUPERFAMILY SSF52172 527 642 3.13E-24 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 SMART SM00388 280 346 1.5E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 SMART SM00091 150 216 2.1E-10 T 23-04-2016 IPR000014 PAS domain LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 Gene3D G3DSA:3.30.565.10 333 510 3.7E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 PANTHER PTHR24423:SF438 10 128 7.8E-171 T 23-04-2016 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 Gene3D G3DSA:1.10.287.130 285 332 1.6E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 Pfam PF00512 His Kinase A (phospho-acceptor) domain 282 344 1.3E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 Pfam PF08447 PAS fold 174 243 6.9E-14 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 Pfam PF08448 PAS fold 17 114 2.7E-6 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS13050 b02cacffe733f97704b0d91ef2d1d52c 650 SMART SM00387 387 508 6.0E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 Gene3D G3DSA:3.50.50.60 7 129 1.5E-121 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 Gene3D G3DSA:3.50.50.60 190 316 1.5E-121 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 Gene3D G3DSA:3.50.50.60 469 532 1.5E-121 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 SUPERFAMILY SSF54373 293 476 2.35E-61 T 23-04-2016 LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 SUPERFAMILY SSF51905 6 291 2.04E-88 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 SUPERFAMILY SSF51905 475 533 2.04E-88 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 PANTHER PTHR11552:SF51 8 550 3.3E-229 T 23-04-2016 LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 Pfam PF05199 GMC oxidoreductase 390 526 8.7E-40 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 PANTHER PTHR11552 8 550 3.3E-229 T 23-04-2016 LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 257 271 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 PIRSF PIRSF000137 4 539 2.1E-155 T 23-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 LT40_RS16015 a0c967fe1591cc3e8a0b60c8ae481523 550 Pfam PF00732 GMC oxidoreductase 8 298 3.1E-82 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 LT40_RS06495 01ade9a6555762096ef41590b9a33d3c 430 PANTHER PTHR19328:SF26 124 428 2.3E-161 T 23-04-2016 LT40_RS06495 01ade9a6555762096ef41590b9a33d3c 430 PANTHER PTHR19328:SF26 42 95 2.3E-161 T 23-04-2016 LT40_RS06495 01ade9a6555762096ef41590b9a33d3c 430 SUPERFAMILY SSF50952 138 429 4.18E-38 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 LT40_RS06495 01ade9a6555762096ef41590b9a33d3c 430 SUPERFAMILY SSF50952 59 92 4.18E-38 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 LT40_RS06495 01ade9a6555762096ef41590b9a33d3c 430 Pfam PF07995 Glucose / Sorbosone dehydrogenase 76 333 2.7E-11 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 LT40_RS06495 01ade9a6555762096ef41590b9a33d3c 430 Gene3D G3DSA:2.120.10.30 59 429 2.8E-61 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS06495 01ade9a6555762096ef41590b9a33d3c 430 Gene3D G3DSA:2.120.10.30 12 20 2.8E-61 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS06495 01ade9a6555762096ef41590b9a33d3c 430 PANTHER PTHR19328 124 428 2.3E-161 T 23-04-2016 LT40_RS06495 01ade9a6555762096ef41590b9a33d3c 430 PANTHER PTHR19328 42 95 2.3E-161 T 23-04-2016 LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 SMART SM00091 245 313 1.5E-7 T 23-04-2016 IPR000014 PAS domain LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 252 366 5.9E-12 T 23-04-2016 IPR000014 PAS domain LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 SUPERFAMILY SSF55073 379 536 5.96E-48 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 Pfam PF00989 PAS fold 250 359 1.8E-9 T 23-04-2016 IPR013767 PAS fold GO:0006355 LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 Gene3D G3DSA:3.20.20.450 551 794 6.9E-73 T 23-04-2016 IPR001633 EAL domain LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 PANTHER PTHR33121:SF10 534 794 2.2E-56 T 23-04-2016 LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 370 534 2.0E-41 T 23-04-2016 IPR000160 GGDEF domain LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 Pfam PF00990 Diguanylate cyclase, GGDEF domain 374 531 2.8E-43 T 23-04-2016 IPR000160 GGDEF domain LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 SUPERFAMILY SSF141868 553 795 5.89E-68 T 23-04-2016 IPR001633 EAL domain LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 Gene3D G3DSA:3.30.70.270 375 538 2.9E-52 T 23-04-2016 LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 PANTHER PTHR33121 534 794 2.2E-56 T 23-04-2016 LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 SMART SM00052 547 798 1.3E-59 T 23-04-2016 IPR001633 EAL domain LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 Pfam PF00563 EAL domain 553 793 1.5E-61 T 23-04-2016 IPR001633 EAL domain LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 SUPERFAMILY SSF55785 232 361 2.79E-15 T 23-04-2016 IPR000014 PAS domain LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 Gene3D G3DSA:3.30.450.20 240 361 7.5E-17 T 23-04-2016 LT40_RS06105 e105b33ccf58bc917d58894d6f7d43d5 820 SMART SM00267 363 535 1.8E-60 T 23-04-2016 IPR000160 GGDEF domain LT40_RS01185 b1e56ded7334546c579d46fc3fd3930a 330 PANTHER PTHR10992:SF732 38 94 3.4E-55 T 23-04-2016 LT40_RS01185 b1e56ded7334546c579d46fc3fd3930a 330 PANTHER PTHR10992:SF732 115 319 3.4E-55 T 23-04-2016 LT40_RS01185 b1e56ded7334546c579d46fc3fd3930a 330 Pfam PF00561 alpha/beta hydrolase fold 49 299 3.2E-21 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS01185 b1e56ded7334546c579d46fc3fd3930a 330 PANTHER PTHR10992 38 94 3.4E-55 T 23-04-2016 LT40_RS01185 b1e56ded7334546c579d46fc3fd3930a 330 PANTHER PTHR10992 115 319 3.4E-55 T 23-04-2016 LT40_RS01185 b1e56ded7334546c579d46fc3fd3930a 330 SUPERFAMILY SSF53474 29 318 1.04E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS01185 b1e56ded7334546c579d46fc3fd3930a 330 Gene3D G3DSA:3.40.50.1820 30 319 5.4E-64 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS02160 ab6c2c343fef145d5ff949fb491cbd02 259 PANTHER PTHR11935 1 259 2.1E-91 T 23-04-2016 LT40_RS02160 ab6c2c343fef145d5ff949fb491cbd02 259 Pfam PF00753 Metallo-beta-lactamase superfamily 14 171 6.2E-14 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS02160 ab6c2c343fef145d5ff949fb491cbd02 259 PANTHER PTHR11935:SF7 1 259 2.1E-91 T 23-04-2016 LT40_RS02160 ab6c2c343fef145d5ff949fb491cbd02 259 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 259 43.515 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 LT40_RS02160 ab6c2c343fef145d5ff949fb491cbd02 259 SMART SM00849 12 171 3.4E-33 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS02160 ab6c2c343fef145d5ff949fb491cbd02 259 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 259 8.1E-101 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 LT40_RS02160 ab6c2c343fef145d5ff949fb491cbd02 259 PIRSF PIRSF005457 1 259 2.5E-100 T 23-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 LT40_RS02160 ab6c2c343fef145d5ff949fb491cbd02 259 SUPERFAMILY SSF56281 3 259 4.87E-70 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS02160 ab6c2c343fef145d5ff949fb491cbd02 259 Gene3D G3DSA:3.60.15.10 5 259 9.5E-87 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS02160 ab6c2c343fef145d5ff949fb491cbd02 259 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 172 259 1.4E-26 T 23-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 LT40_RS14385 627ddef4f055cf0e8a0064ac8c8c2d49 381 SUPERFAMILY SSF55681 57 251 2.11E-10 T 23-04-2016 LT40_RS14385 627ddef4f055cf0e8a0064ac8c8c2d49 381 Gene3D G3DSA:3.30.930.10 28 261 9.1E-22 T 23-04-2016 LT40_RS14385 627ddef4f055cf0e8a0064ac8c8c2d49 381 Pfam PF01409 tRNA synthetases class II core domain (F) 86 255 2.8E-15 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 Gene3D G3DSA:3.30.230.10 222 333 3.9E-39 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 Pfam PF08676 MutL C terminal dimerisation domain 440 587 1.2E-50 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 SUPERFAMILY SSF54211 195 334 3.72E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 6 314 5.1E-103 T 23-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 Gene3D G3DSA:3.30.565.10 6 216 5.1E-75 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 217 333 6.9E-40 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 SMART SM00853 444 587 3.0E-56 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 97 103 - T 23-04-2016 IPR014762 DNA mismatch repair, conserved site LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 SMART SM01340 216 334 1.8E-62 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 5 627 29.909 T 23-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 SUPERFAMILY SSF55874 6 206 1.57E-53 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 128 1.4E-10 T 23-04-2016 LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 PANTHER PTHR10073 7 627 7.9E-176 T 23-04-2016 LT40_RS13820 120cbe903e41ec6602aae8c6a453a51a 631 SUPERFAMILY SSF118116 440 629 1.26E-60 T 23-04-2016 LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.3E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.3E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.3E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 Gene3D G3DSA:3.40.190.10 95 177 6.2E-31 T 23-04-2016 LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 PANTHER PTHR30537 1 295 2.3E-129 T 23-04-2016 LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 SUPERFAMILY SSF46785 3 82 1.3E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 SUPERFAMILY SSF53850 94 295 7.96E-32 T 23-04-2016 LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 6.7E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 Pfam PF03466 LysR substrate binding domain 90 291 2.6E-30 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 Gene3D G3DSA:3.40.190.10 178 260 3.2E-32 T 23-04-2016 LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 PANTHER PTHR30537:SF15 1 295 2.3E-129 T 23-04-2016 LT40_RS15555 dabdf6be5b65f6059ce213e5286bed71 307 Gene3D G3DSA:1.10.10.10 2 84 7.3E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 Gene3D G3DSA:3.30.70.1430 45 146 7.2E-18 T 23-04-2016 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 SUPERFAMILY SSF82714 190 271 1.44E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 PANTHER PTHR32063:SF18 5 1018 0.0 T 23-04-2016 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 PANTHER PTHR32063 5 1018 0.0 T 23-04-2016 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 Gene3D G3DSA:3.30.2090.10 192 272 1.7E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 SUPERFAMILY SSF82714 710 795 7.46E-14 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 SUPERFAMILY SSF82866 298 493 9.16E-35 T 23-04-2016 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 4.4E-18 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 4.4E-18 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 4.4E-18 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 4.4E-18 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 4.4E-18 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 Gene3D G3DSA:3.30.2090.10 710 795 2.4E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 SUPERFAMILY SSF82693 273 329 3.14E-15 T 23-04-2016 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 SUPERFAMILY SSF82693 144 187 3.14E-15 T 23-04-2016 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 Pfam PF00873 AcrB/AcrD/AcrF family 9 1011 5.6E-143 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 Gene3D G3DSA:1.10.3850.10 279 491 7.7E-43 T 23-04-2016 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 Gene3D G3DSA:1.10.3850.10 802 1014 2.1E-44 T 23-04-2016 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 SUPERFAMILY SSF82693 45 141 1.96E-16 T 23-04-2016 LT40_RS08250 a0ead50c47c6e4af29e85043afd8d219 1033 SUPERFAMILY SSF82866 794 1015 5.49E-37 T 23-04-2016 LT40_RS19390 95202e489abff3dd38d54c801b69a599 205 Gene3D G3DSA:1.10.287.460 2 93 1.8E-22 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LT40_RS19390 95202e489abff3dd38d54c801b69a599 205 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 202 4.0E-27 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LT40_RS19390 95202e489abff3dd38d54c801b69a599 205 SUPERFAMILY SSF54534 7 204 2.75E-57 T 23-04-2016 LT40_RS19390 95202e489abff3dd38d54c801b69a599 205 PANTHER PTHR10516:SF320 86 204 1.1E-77 T 23-04-2016 LT40_RS19390 95202e489abff3dd38d54c801b69a599 205 PANTHER PTHR10516:SF320 6 67 1.1E-77 T 23-04-2016 LT40_RS19390 95202e489abff3dd38d54c801b69a599 205 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 2.6E-24 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LT40_RS19390 95202e489abff3dd38d54c801b69a599 205 Gene3D G3DSA:3.10.50.40 94 204 3.4E-44 T 23-04-2016 LT40_RS19390 95202e489abff3dd38d54c801b69a599 205 PANTHER PTHR10516 86 204 1.1E-77 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LT40_RS19390 95202e489abff3dd38d54c801b69a599 205 PANTHER PTHR10516 6 67 1.1E-77 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LT40_RS11305 185c15921a23f7bc71e4eee42f3d144c 91 PANTHER PTHR11544 3 87 2.0E-34 T 23-04-2016 LT40_RS11305 185c15921a23f7bc71e4eee42f3d144c 91 Gene3D G3DSA:2.40.50.140 3 67 8.5E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS11305 185c15921a23f7bc71e4eee42f3d144c 91 PRINTS PR00050 Cold shock protein signature 27 36 9.4E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS11305 185c15921a23f7bc71e4eee42f3d144c 91 PRINTS PR00050 Cold shock protein signature 42 60 9.4E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS11305 185c15921a23f7bc71e4eee42f3d144c 91 PRINTS PR00050 Cold shock protein signature 6 21 9.4E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS11305 185c15921a23f7bc71e4eee42f3d144c 91 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 3 69 4.0E-36 T 23-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 LT40_RS11305 185c15921a23f7bc71e4eee42f3d144c 91 PANTHER PTHR11544:SF52 3 87 2.0E-34 T 23-04-2016 LT40_RS11305 185c15921a23f7bc71e4eee42f3d144c 91 SMART SM00357 5 69 2.4E-23 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 LT40_RS11305 185c15921a23f7bc71e4eee42f3d144c 91 SUPERFAMILY SSF50249 3 67 1.2E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS11305 185c15921a23f7bc71e4eee42f3d144c 91 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 23-04-2016 IPR019844 Cold-shock conserved site LT40_RS11305 185c15921a23f7bc71e4eee42f3d144c 91 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 2.1E-25 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS12325 84aa9eacf3cd1559ecd0e2f36d7497f3 399 Gene3D G3DSA:3.40.640.10 58 280 1.9E-77 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS12325 84aa9eacf3cd1559ecd0e2f36d7497f3 399 Gene3D G3DSA:3.90.1150.10 281 398 1.0E-9 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS12325 84aa9eacf3cd1559ecd0e2f36d7497f3 399 SUPERFAMILY SSF53383 5 398 5.28E-100 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS12325 84aa9eacf3cd1559ecd0e2f36d7497f3 399 PANTHER PTHR11751 14 399 6.1E-103 T 23-04-2016 LT40_RS12325 84aa9eacf3cd1559ecd0e2f36d7497f3 399 Pfam PF00155 Aminotransferase class I and II 59 393 1.2E-32 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS12325 84aa9eacf3cd1559ecd0e2f36d7497f3 399 PANTHER PTHR11751:SF294 14 399 6.1E-103 T 23-04-2016 LT40_RS19320 24f3c2b05a5f869464ca28aecef52f11 230 SUPERFAMILY SSF56784 10 217 2.32E-50 T 23-04-2016 IPR023214 HAD-like domain LT40_RS19320 24f3c2b05a5f869464ca28aecef52f11 230 PANTHER PTHR18901:SF38 3 227 6.9E-100 T 23-04-2016 LT40_RS19320 24f3c2b05a5f869464ca28aecef52f11 230 PANTHER PTHR18901 3 227 6.9E-100 T 23-04-2016 LT40_RS19320 24f3c2b05a5f869464ca28aecef52f11 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 195 1.7E-24 T 23-04-2016 IPR023214 HAD-like domain LT40_RS19320 24f3c2b05a5f869464ca28aecef52f11 230 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 194 3.2E-16 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS19320 24f3c2b05a5f869464ca28aecef52f11 230 Gene3D G3DSA:3.40.50.1000 6 25 2.7E-51 T 23-04-2016 IPR023214 HAD-like domain LT40_RS19320 24f3c2b05a5f869464ca28aecef52f11 230 Gene3D G3DSA:3.40.50.1000 96 227 2.7E-51 T 23-04-2016 IPR023214 HAD-like domain LT40_RS13895 22cd3ea2f67c400770adcf938f9c5daf 391 Pfam PF00202 Aminotransferase class-III 11 386 1.5E-107 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS13895 22cd3ea2f67c400770adcf938f9c5daf 391 Gene3D G3DSA:3.40.640.10 49 281 1.3E-81 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS13895 22cd3ea2f67c400770adcf938f9c5daf 391 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 389 42.087 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LT40_RS13895 22cd3ea2f67c400770adcf938f9c5daf 391 PANTHER PTHR11986 1 391 2.3E-152 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS13895 22cd3ea2f67c400770adcf938f9c5daf 391 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 214 251 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS13895 22cd3ea2f67c400770adcf938f9c5daf 391 SUPERFAMILY SSF53383 4 389 1.15E-118 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS13895 22cd3ea2f67c400770adcf938f9c5daf 391 Gene3D G3DSA:3.90.1150.10 282 390 3.9E-35 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS13895 22cd3ea2f67c400770adcf938f9c5daf 391 PANTHER PTHR11986:SF79 1 391 2.3E-152 T 23-04-2016 LT40_RS13895 22cd3ea2f67c400770adcf938f9c5daf 391 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 6 388 2.0E-134 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LT40_RS19785 547a5aad00378d1929e39df8f8c77db9 136 PANTHER PTHR33653:SF2 1 131 4.2E-46 T 23-04-2016 LT40_RS19785 547a5aad00378d1929e39df8f8c77db9 136 Gene3D G3DSA:3.40.50.1010 3 132 2.9E-31 T 23-04-2016 IPR029060 PIN domain-like LT40_RS19785 547a5aad00378d1929e39df8f8c77db9 136 PANTHER PTHR33653 1 131 4.2E-46 T 23-04-2016 LT40_RS19785 547a5aad00378d1929e39df8f8c77db9 136 SUPERFAMILY SSF88723 1 131 1.63E-32 T 23-04-2016 IPR029060 PIN domain-like LT40_RS19785 547a5aad00378d1929e39df8f8c77db9 136 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 12.669 T 23-04-2016 IPR022907 VapC family GO:0004540 LT40_RS19785 547a5aad00378d1929e39df8f8c77db9 136 Pfam PF01850 PIN domain 5 123 3.8E-14 T 23-04-2016 IPR002716 PIN domain LT40_RS14235 4ad6cd9b54a117c7c2548be7d980e52e 354 SUPERFAMILY SSF53067 192 352 5.41E-29 T 23-04-2016 LT40_RS14235 4ad6cd9b54a117c7c2548be7d980e52e 354 Pfam PF11104 Type IV pilus assembly protein PilM; 14 353 3.4E-141 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM LT40_RS14235 4ad6cd9b54a117c7c2548be7d980e52e 354 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 10 353 4.3E-142 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM LT40_RS14235 4ad6cd9b54a117c7c2548be7d980e52e 354 Gene3D G3DSA:3.30.420.40 8 105 1.1E-5 T 23-04-2016 LT40_RS14235 4ad6cd9b54a117c7c2548be7d980e52e 354 Gene3D G3DSA:3.30.420.40 196 315 1.1E-28 T 23-04-2016 LT40_RS14235 4ad6cd9b54a117c7c2548be7d980e52e 354 SUPERFAMILY SSF53067 12 178 1.0E-13 T 23-04-2016 LT40_RS14235 4ad6cd9b54a117c7c2548be7d980e52e 354 PANTHER PTHR32432 1 353 3.3E-95 T 23-04-2016 LT40_RS14235 4ad6cd9b54a117c7c2548be7d980e52e 354 PIRSF PIRSF019169 1 354 6.0E-127 T 23-04-2016 IPR005883 Type IV pilus assembly protein PilM LT40_RS14235 4ad6cd9b54a117c7c2548be7d980e52e 354 SMART SM00842 12 179 2.5E-4 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 LT40_RS14235 4ad6cd9b54a117c7c2548be7d980e52e 354 PANTHER PTHR32432:SF3 1 353 3.3E-95 T 23-04-2016 LT40_RS04860 aa9030f5fd10fba6716569ca65df8210 254 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 246 4.4E-96 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LT40_RS04860 aa9030f5fd10fba6716569ca65df8210 254 Pfam PF02348 Cytidylyltransferase 7 226 9.2E-60 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LT40_RS04860 aa9030f5fd10fba6716569ca65df8210 254 Gene3D G3DSA:3.90.550.10 5 253 1.3E-83 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS04860 aa9030f5fd10fba6716569ca65df8210 254 PANTHER PTHR21485 5 252 4.4E-118 T 23-04-2016 LT40_RS04860 aa9030f5fd10fba6716569ca65df8210 254 PANTHER PTHR21485:SF4 5 252 4.4E-118 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LT40_RS04860 aa9030f5fd10fba6716569ca65df8210 254 SUPERFAMILY SSF53448 5 253 9.91E-64 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS04860 aa9030f5fd10fba6716569ca65df8210 254 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 3 253 44.93 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 LT40_RS03055 48b75b475e9279c6813c8ba14d2e6586 149 PANTHER PTHR23404 27 149 9.6E-40 T 23-04-2016 LT40_RS03055 48b75b475e9279c6813c8ba14d2e6586 149 PANTHER PTHR23404:SF2 27 149 9.6E-40 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS03055 48b75b475e9279c6813c8ba14d2e6586 149 SUPERFAMILY SSF54690 3 148 7.06E-53 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS03055 48b75b475e9279c6813c8ba14d2e6586 149 Pfam PF02391 MoaE protein 5 119 2.3E-35 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS03055 48b75b475e9279c6813c8ba14d2e6586 149 Gene3D G3DSA:3.90.1170.40 2 148 4.4E-55 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS13665 fb68468eee6e630c76c1bafc6bbe6ea2 238 PIRSF PIRSF039137 1 238 1.3E-101 T 23-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 LT40_RS13665 fb68468eee6e630c76c1bafc6bbe6ea2 238 PANTHER PTHR24220:SF515 7 236 6.4E-149 T 23-04-2016 LT40_RS13665 fb68468eee6e630c76c1bafc6bbe6ea2 238 PANTHER PTHR24220 7 236 6.4E-149 T 23-04-2016 LT40_RS13665 fb68468eee6e630c76c1bafc6bbe6ea2 238 SMART SM00382 30 214 8.4E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS13665 fb68468eee6e630c76c1bafc6bbe6ea2 238 Gene3D G3DSA:3.40.50.300 2 234 1.2E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13665 fb68468eee6e630c76c1bafc6bbe6ea2 238 Pfam PF00005 ABC transporter 21 165 2.8E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS13665 fb68468eee6e630c76c1bafc6bbe6ea2 238 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS13665 fb68468eee6e630c76c1bafc6bbe6ea2 238 SUPERFAMILY SSF52540 4 235 8.63E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12880 0145ffd1717b509bd584a2aa576f17f3 133 Gene3D G3DSA:3.30.300.20 4 120 1.6E-41 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta LT40_RS12880 0145ffd1717b509bd584a2aa576f17f3 133 Pfam PF02033 Ribosome-binding factor A 7 112 1.5E-32 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LT40_RS12880 0145ffd1717b509bd584a2aa576f17f3 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 8.0E-35 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LT40_RS12880 0145ffd1717b509bd584a2aa576f17f3 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 99 8.0E-46 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LT40_RS12880 0145ffd1717b509bd584a2aa576f17f3 133 SUPERFAMILY SSF89919 2 106 4.06E-35 T 23-04-2016 IPR023799 Ribosome-binding factor A domain LT40_RS12880 0145ffd1717b509bd584a2aa576f17f3 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 78 99 - T 23-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 LT40_RS12880 0145ffd1717b509bd584a2aa576f17f3 133 PANTHER PTHR33515 1 133 5.8E-46 T 23-04-2016 LT40_RS12880 0145ffd1717b509bd584a2aa576f17f3 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 119 23.469 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 LT40_RS11740 73eeb538e1cd36e512ee0bd0eb29beba 336 Pfam PF13438 Domain of unknown function (DUF4113) 274 324 2.4E-18 T 23-04-2016 IPR025188 Domain of unknown function DUF4113 LT40_RS11740 73eeb538e1cd36e512ee0bd0eb29beba 336 Pfam PF11799 impB/mucB/samB family C-terminal domain 144 255 1.7E-8 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS11740 73eeb538e1cd36e512ee0bd0eb29beba 336 SUPERFAMILY SSF56672 2 141 4.0E-33 T 23-04-2016 LT40_RS11740 73eeb538e1cd36e512ee0bd0eb29beba 336 PANTHER PTHR11076:SF40 2 310 2.1E-92 T 23-04-2016 LT40_RS11740 73eeb538e1cd36e512ee0bd0eb29beba 336 Gene3D G3DSA:1.10.150.20 76 142 1.2E-15 T 23-04-2016 LT40_RS11740 73eeb538e1cd36e512ee0bd0eb29beba 336 PANTHER PTHR11076 2 310 2.1E-92 T 23-04-2016 LT40_RS11740 73eeb538e1cd36e512ee0bd0eb29beba 336 Pfam PF00817 impB/mucB/samB family 2 54 5.4E-12 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS11740 73eeb538e1cd36e512ee0bd0eb29beba 336 Gene3D G3DSA:3.30.70.270 2 60 8.3E-15 T 23-04-2016 LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 Pfam PF00072 Response regulator receiver domain 4 109 5.4E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 Gene3D G3DSA:3.40.50.300 147 320 2.3E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 PANTHER PTHR32071:SF18 1 478 3.3E-220 T 23-04-2016 LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 Gene3D G3DSA:1.10.8.60 321 393 1.2E-20 T 23-04-2016 LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 Gene3D G3DSA:3.40.50.2300 1 120 6.9E-31 T 23-04-2016 LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 SUPERFAMILY SSF52540 147 389 3.3E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 PANTHER PTHR32071 1 478 3.3E-220 T 23-04-2016 LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 SMART SM00448 2 109 1.7E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 SUPERFAMILY SSF52172 1 193 9.25E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 Pfam PF00158 Sigma-54 interaction domain 148 314 6.2E-73 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS12815 75722df23e1994afc0d9b22541d45ce5 478 SMART SM00382 168 318 7.6E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 Gene3D G3DSA:2.40.30.20 3 94 1.2E-32 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 513 49.604 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 367 376 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 PIRSF PIRSF039088 2 514 7.5E-232 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 PANTHER PTHR15184 1 497 1.8E-292 T 23-04-2016 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 Gene3D G3DSA:1.20.150.20 384 511 5.4E-49 T 23-04-2016 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 SUPERFAMILY SSF50615 11 95 2.94E-28 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 SUPERFAMILY SSF52540 97 382 3.75E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 376 3.5E-73 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 513 5.4E-250 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 1.1E-14 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 PANTHER PTHR15184:SF3 1 497 1.8E-292 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 Gene3D G3DSA:3.40.50.300 95 383 1.5E-110 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 383 508 9.4E-45 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16115 b707f57522c53d9efe3513245fe7360c 514 SUPERFAMILY SSF47917 384 512 8.37E-46 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS18955 24e903b75f32acc028ab8dbc7bca202e 289 Pfam PF16916 Dimerisation domain of Zinc Transporter 215 289 3.5E-24 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain LT40_RS18955 24e903b75f32acc028ab8dbc7bca202e 289 Gene3D G3DSA:1.20.1510.10 14 208 5.8E-42 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain LT40_RS18955 24e903b75f32acc028ab8dbc7bca202e 289 SUPERFAMILY SSF161111 9 209 5.1E-51 T 23-04-2016 LT40_RS18955 24e903b75f32acc028ab8dbc7bca202e 289 Gene3D G3DSA:3.30.70.1350 209 289 7.8E-27 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain LT40_RS18955 24e903b75f32acc028ab8dbc7bca202e 289 PANTHER PTHR11562:SF55 5 288 1.0E-101 T 23-04-2016 LT40_RS18955 24e903b75f32acc028ab8dbc7bca202e 289 SUPERFAMILY SSF160240 215 289 2.35E-22 T 23-04-2016 LT40_RS18955 24e903b75f32acc028ab8dbc7bca202e 289 Pfam PF01545 Cation efflux family 16 208 1.3E-35 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LT40_RS18955 24e903b75f32acc028ab8dbc7bca202e 289 PANTHER PTHR11562 5 288 1.0E-101 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LT40_RS18955 24e903b75f32acc028ab8dbc7bca202e 289 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 15 288 1.5E-63 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 SUPERFAMILY SSF51621 651 938 1.3E-100 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 140 2.4E-26 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 Gene3D G3DSA:3.20.20.60 654 956 5.2E-103 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 Gene3D G3DSA:3.40.930.10 4 143 8.5E-35 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 Gene3D G3DSA:3.40.930.10 148 276 9.4E-12 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 PRINTS PR00107 Phosphocarrier protein signature 322 337 3.8E-9 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 PRINTS PR00107 Phosphocarrier protein signature 294 310 3.8E-9 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 PRINTS PR00107 Phosphocarrier protein signature 337 354 3.8E-9 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 SUPERFAMILY SSF52009 522 634 3.01E-31 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 SUPERFAMILY SSF55594 283 371 1.83E-19 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 651 929 3.6E-105 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 407 955 2.7E-150 T 23-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 579 590 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 Pfam PF00391 PEP-utilising enzyme, mobile domain 549 620 1.7E-21 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 Pfam PF05524 PEP-utilising enzyme, N-terminal 407 523 4.5E-23 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 SUPERFAMILY SSF47831 433 540 1.57E-25 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 285 365 6.0E-14 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 Gene3D G3DSA:3.30.1340.10 284 372 1.0E-21 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 Gene3D G3DSA:3.50.30.10 531 647 1.6E-34 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 688 707 2.5E-19 T 23-04-2016 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 853 868 2.5E-19 T 23-04-2016 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 836 851 2.5E-19 T 23-04-2016 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 889 901 2.5E-19 T 23-04-2016 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 Gene3D G3DSA:1.10.274.10 433 530 1.6E-29 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 PANTHER PTHR22931:SF15 422 939 7.3E-234 T 23-04-2016 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 836 854 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 SUPERFAMILY SSF55804 4 141 1.31E-35 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 PANTHER PTHR22931 422 939 7.3E-234 T 23-04-2016 LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 Pfam PF00381 PTS HPr component phosphorylation site 285 366 6.1E-18 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS19725 f7bd23b51d93e34d50a8653d2cd3439a 957 SUPERFAMILY SSF55804 148 274 4.45E-15 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LT40_RS14615 069ab9e4ddf6f693d439bbc5fb7f79a8 379 Gene3D G3DSA:3.40.50.1820 36 208 8.2E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS14615 069ab9e4ddf6f693d439bbc5fb7f79a8 379 Gene3D G3DSA:3.40.50.1820 241 360 8.2E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS14615 069ab9e4ddf6f693d439bbc5fb7f79a8 379 PANTHER PTHR32268:SF11 1 377 2.2E-186 T 23-04-2016 LT40_RS14615 069ab9e4ddf6f693d439bbc5fb7f79a8 379 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 22 371 1.9E-138 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 LT40_RS14615 069ab9e4ddf6f693d439bbc5fb7f79a8 379 PIRSF PIRSF000443 1 379 4.0E-135 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 LT40_RS14615 069ab9e4ddf6f693d439bbc5fb7f79a8 379 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 8 376 50.067 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 LT40_RS14615 069ab9e4ddf6f693d439bbc5fb7f79a8 379 SUPERFAMILY SSF53474 14 375 1.5E-101 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS14615 069ab9e4ddf6f693d439bbc5fb7f79a8 379 PANTHER PTHR32268 1 377 2.2E-186 T 23-04-2016 LT40_RS14615 069ab9e4ddf6f693d439bbc5fb7f79a8 379 Pfam PF00561 alpha/beta hydrolase fold 51 360 1.0E-30 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 471 4.7E-164 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 Gene3D G3DSA:3.50.50.60 148 339 3.5E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 SUPERFAMILY SSF55424 349 471 5.84E-43 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 Gene3D G3DSA:3.30.390.30 340 470 4.9E-51 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PANTHER PTHR22912 1 464 2.9E-262 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 4.9E-82 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 4.9E-82 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 4.9E-82 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 4.9E-82 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 4.9E-82 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 4.9E-82 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 4.9E-82 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 4.9E-82 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.9E-82 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 333 9.5E-73 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 461 1.1E-40 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PIRSF PIRSF000350 1 469 2.0E-86 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 Gene3D G3DSA:3.50.50.60 3 147 1.6E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PANTHER PTHR22912:SF131 1 464 2.9E-262 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 SUPERFAMILY SSF51905 1 343 5.98E-64 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 2.8E-40 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 2.8E-40 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.8E-40 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.8E-40 T 23-04-2016 LT40_RS12570 a447be82fb5893b882a369b027f37225 477 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 2.8E-40 T 23-04-2016 LT40_RS05785 f100ab60102d2d050c002e2ba10ef802 225 SUPERFAMILY SSF46894 127 223 1.05E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS05785 f100ab60102d2d050c002e2ba10ef802 225 SUPERFAMILY SSF52172 4 122 3.56E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS05785 f100ab60102d2d050c002e2ba10ef802 225 SMART SM00448 2 113 1.9E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05785 f100ab60102d2d050c002e2ba10ef802 225 Gene3D G3DSA:3.40.50.2300 3 121 8.4E-39 T 23-04-2016 LT40_RS05785 f100ab60102d2d050c002e2ba10ef802 225 SMART SM00862 147 223 6.1E-13 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS05785 f100ab60102d2d050c002e2ba10ef802 225 PANTHER PTHR26402:SF476 2 223 7.7E-93 T 23-04-2016 LT40_RS05785 f100ab60102d2d050c002e2ba10ef802 225 PANTHER PTHR26402 2 223 7.7E-93 T 23-04-2016 LT40_RS05785 f100ab60102d2d050c002e2ba10ef802 225 Gene3D G3DSA:1.10.10.10 128 222 2.9E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05785 f100ab60102d2d050c002e2ba10ef802 225 Pfam PF00072 Response regulator receiver domain 5 113 1.6E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05785 f100ab60102d2d050c002e2ba10ef802 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 3.3E-15 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 SMART SM00959 5 47 9.4E-19 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 Gene3D G3DSA:2.40.50.140 49 117 1.4E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 PANTHER PTHR15184 102 141 6.8E-195 T 23-04-2016 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 PANTHER PTHR15184 11 51 6.8E-195 T 23-04-2016 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 PANTHER PTHR15184 160 402 6.8E-195 T 23-04-2016 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.371 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 4.3E-18 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 SUPERFAMILY SSF50249 49 125 1.71E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 Gene3D G3DSA:3.40.50.300 132 418 9.9E-107 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 SUPERFAMILY SSF52540 90 371 7.83E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 SMART SM00382 170 355 1.6E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 3.3E-24 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 PANTHER PTHR15184:SF34 102 141 6.8E-195 T 23-04-2016 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 PANTHER PTHR15184:SF34 11 51 6.8E-195 T 23-04-2016 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 PANTHER PTHR15184:SF34 160 402 6.8E-195 T 23-04-2016 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 SUPERFAMILY SSF68912 1 46 2.16E-12 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 SMART SM00357 52 118 6.6E-19 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.3E-32 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 6.2E-218 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 LT40_RS16870 4e1332ffac6ace2df570735fadc1624e 419 Gene3D G3DSA:1.10.720.10 1 47 2.6E-22 T 23-04-2016 LT40_RS16355 f30923a76120c832a2a33030b5ade1a9 332 Pfam PF12849 PBP superfamily domain 38 295 2.6E-34 T 23-04-2016 IPR024370 PBP domain LT40_RS16355 f30923a76120c832a2a33030b5ade1a9 332 SUPERFAMILY SSF53850 36 321 2.79E-72 T 23-04-2016 LT40_RS16355 f30923a76120c832a2a33030b5ade1a9 332 PANTHER PTHR30570 3 321 5.0E-160 T 23-04-2016 LT40_RS16355 f30923a76120c832a2a33030b5ade1a9 332 Gene3D G3DSA:3.40.190.10 123 266 8.4E-37 T 23-04-2016 LT40_RS16355 f30923a76120c832a2a33030b5ade1a9 332 PANTHER PTHR30570:SF5 3 321 5.0E-160 T 23-04-2016 LT40_RS16355 f30923a76120c832a2a33030b5ade1a9 332 Gene3D G3DSA:3.40.190.10 43 120 2.7E-11 T 23-04-2016 LT40_RS16355 f30923a76120c832a2a33030b5ade1a9 332 Gene3D G3DSA:3.40.190.10 267 318 2.7E-11 T 23-04-2016 LT40_RS16355 f30923a76120c832a2a33030b5ade1a9 332 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 5 309 1.4E-98 T 23-04-2016 IPR011862 Phosphate binding protein GO:0006810 LT40_RS09330 483e464b7d63e715a350e8589e37da47 341 Gene3D G3DSA:3.90.226.10 90 196 3.7E-33 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS09330 483e464b7d63e715a350e8589e37da47 341 Gene3D G3DSA:3.90.226.10 262 301 3.7E-33 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS09330 483e464b7d63e715a350e8589e37da47 341 SUPERFAMILY SSF52096 231 290 1.01E-26 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS09330 483e464b7d63e715a350e8589e37da47 341 SUPERFAMILY SSF52096 91 200 1.01E-26 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS09330 483e464b7d63e715a350e8589e37da47 341 Pfam PF08496 Peptidase family S49 N-terminal 2 149 1.5E-52 T 23-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 LT40_RS09330 483e464b7d63e715a350e8589e37da47 341 PANTHER PTHR33209 2 341 1.4E-180 T 23-04-2016 LT40_RS09330 483e464b7d63e715a350e8589e37da47 341 Pfam PF01343 Peptidase family S49 152 301 6.4E-45 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 LT40_RS09330 483e464b7d63e715a350e8589e37da47 341 PANTHER PTHR33209:SF2 2 341 1.4E-180 T 23-04-2016 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 132 147 4.8E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 264 274 4.8E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 4.8E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 4.8E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 4.8E-10 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 13 884 0.0 T 23-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 Pfam PF11940 Domain of unknown function (DUF3458) 465 840 1.0E-139 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 PANTHER PTHR11533:SF152 619 884 0.0 T 23-04-2016 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 PANTHER PTHR11533:SF152 2 595 0.0 T 23-04-2016 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 Gene3D G3DSA:1.25.50.10 556 885 7.0E-130 T 23-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 SUPERFAMILY SSF63737 4 199 9.55E-43 T 23-04-2016 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 SUPERFAMILY SSF55486 210 456 7.51E-76 T 23-04-2016 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 PANTHER PTHR11533 619 884 0.0 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 PANTHER PTHR11533 2 595 0.0 T 23-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 Pfam PF01433 Peptidase family M1 109 390 1.3E-67 T 23-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LT40_RS06555 3d5eac88382ce8e399da7beddce5404f 885 Gene3D G3DSA:1.10.390.10 314 457 5.0E-31 T 23-04-2016 LT40_RS13545 70e1fd2f094d46c3ff5281dd36c460de 521 PANTHER PTHR11795:SF349 205 521 2.4E-175 T 23-04-2016 LT40_RS13545 70e1fd2f094d46c3ff5281dd36c460de 521 PANTHER PTHR11795 205 521 2.4E-175 T 23-04-2016 LT40_RS13545 70e1fd2f094d46c3ff5281dd36c460de 521 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 227 518 3.7E-132 T 23-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type LT40_RS13545 70e1fd2f094d46c3ff5281dd36c460de 521 SUPERFAMILY SSF48371 111 217 9.05E-8 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 LT40_RS13545 70e1fd2f094d46c3ff5281dd36c460de 521 Gene3D G3DSA:1.25.10.10 111 215 4.4E-6 T 23-04-2016 IPR011989 Armadillo-like helical LT40_RS13545 70e1fd2f094d46c3ff5281dd36c460de 521 Pfam PF02653 Branched-chain amino acid transport system / permease component 229 504 1.2E-50 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS18460 0fa8d45dedc917753404482fd8f5a7d5 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.6E-54 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18460 0fa8d45dedc917753404482fd8f5a7d5 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.5E-33 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18460 0fa8d45dedc917753404482fd8f5a7d5 118 PANTHER PTHR10871 1 118 2.1E-69 T 23-04-2016 LT40_RS18460 0fa8d45dedc917753404482fd8f5a7d5 118 Gene3D G3DSA:1.10.8.50 1 71 3.0E-31 T 23-04-2016 LT40_RS18460 0fa8d45dedc917753404482fd8f5a7d5 118 Gene3D G3DSA:4.10.910.10 72 118 1.4E-26 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal LT40_RS18460 0fa8d45dedc917753404482fd8f5a7d5 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 26.576 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18460 0fa8d45dedc917753404482fd8f5a7d5 118 PIRSF PIRSF002134 1 118 5.4E-44 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18460 0fa8d45dedc917753404482fd8f5a7d5 118 SUPERFAMILY SSF46946 2 114 7.72E-48 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LT40_RS18460 0fa8d45dedc917753404482fd8f5a7d5 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS00620 237ed29d3aa80cd5ff4696872340cf40 259 SUPERFAMILY SSF63380 6 100 5.02E-25 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS00620 237ed29d3aa80cd5ff4696872340cf40 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 216 224 3.0E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS00620 237ed29d3aa80cd5ff4696872340cf40 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 112 131 3.0E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS00620 237ed29d3aa80cd5ff4696872340cf40 259 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 52 59 3.0E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS00620 237ed29d3aa80cd5ff4696872340cf40 259 Gene3D G3DSA:3.40.50.80 99 258 8.8E-49 T 23-04-2016 LT40_RS00620 237ed29d3aa80cd5ff4696872340cf40 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 229 1.2E-8 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LT40_RS00620 237ed29d3aa80cd5ff4696872340cf40 259 PANTHER PTHR19370:SF98 5 238 1.3E-127 T 23-04-2016 LT40_RS00620 237ed29d3aa80cd5ff4696872340cf40 259 Pfam PF00970 Oxidoreductase FAD-binding domain 17 99 3.6E-8 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain LT40_RS00620 237ed29d3aa80cd5ff4696872340cf40 259 PANTHER PTHR19370 5 238 1.3E-127 T 23-04-2016 LT40_RS00620 237ed29d3aa80cd5ff4696872340cf40 259 Gene3D G3DSA:2.40.30.10 6 98 2.2E-31 T 23-04-2016 LT40_RS00620 237ed29d3aa80cd5ff4696872340cf40 259 SUPERFAMILY SSF52343 103 257 1.83E-43 T 23-04-2016 LT40_RS07215 6df728def9421512ec86dc7266bfa859 73 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 72 8.9E-21 T 23-04-2016 IPR010305 Protein of unknown function DUF903 LT40_RS07215 6df728def9421512ec86dc7266bfa859 73 PANTHER PTHR37011 2 73 3.9E-34 T 23-04-2016 LT40_RS07215 6df728def9421512ec86dc7266bfa859 73 SUPERFAMILY SSF50182 22 72 9.27E-16 T 23-04-2016 IPR010920 LSM domain LT40_RS07215 6df728def9421512ec86dc7266bfa859 73 PANTHER PTHR37011:SF1 2 73 3.9E-34 T 23-04-2016 LT40_RS07215 6df728def9421512ec86dc7266bfa859 73 Gene3D G3DSA:2.30.30.100 21 73 3.7E-22 T 23-04-2016 LT40_RS09480 2fade2c908863264817411427c9b840f 386 PANTHER PTHR30124 8 386 1.2E-128 T 23-04-2016 LT40_RS09480 2fade2c908863264817411427c9b840f 386 SMART SM00925 128 283 2.5E-78 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 LT40_RS09480 2fade2c908863264817411427c9b840f 386 SUPERFAMILY SSF50685 39 381 1.74E-121 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LT40_RS09480 2fade2c908863264817411427c9b840f 386 PANTHER PTHR30124:SF0 8 386 1.2E-128 T 23-04-2016 LT40_RS09480 2fade2c908863264817411427c9b840f 386 Pfam PF06725 3D domain 305 376 5.6E-24 T 23-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 LT40_RS09480 2fade2c908863264817411427c9b840f 386 Gene3D G3DSA:2.40.40.10 41 191 2.4E-27 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LT40_RS09480 2fade2c908863264817411427c9b840f 386 Gene3D G3DSA:2.40.40.10 194 382 1.1E-54 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LT40_RS09480 2fade2c908863264817411427c9b840f 386 PIRSF PIRSF019422 2 385 5.3E-119 T 23-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A LT40_RS09480 2fade2c908863264817411427c9b840f 386 Pfam PF03562 MltA specific insert domain 57 282 1.6E-75 T 23-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 LT40_RS07070 1cded1bab5beee7f546831c77c664807 479 PANTHER PTHR11699 4 475 1.1E-182 T 23-04-2016 LT40_RS07070 1cded1bab5beee7f546831c77c664807 479 Pfam PF00171 Aldehyde dehydrogenase family 14 471 2.9E-154 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS07070 1cded1bab5beee7f546831c77c664807 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS07070 1cded1bab5beee7f546831c77c664807 479 Gene3D G3DSA:3.40.605.10 7 261 4.3E-79 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS07070 1cded1bab5beee7f546831c77c664807 479 Gene3D G3DSA:3.40.309.10 262 447 3.8E-65 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS07070 1cded1bab5beee7f546831c77c664807 479 SUPERFAMILY SSF53720 3 475 1.03E-147 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS07070 1cded1bab5beee7f546831c77c664807 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 301 1.3E-162 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 SUPERFAMILY SSF55681 10 293 3.22E-134 T 23-04-2016 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 292 5.0E-150 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 Gene3D G3DSA:3.30.930.10 7 216 3.4E-107 T 23-04-2016 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 Gene3D G3DSA:1.20.58.180 217 300 2.9E-35 T 23-04-2016 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 PANTHER PTHR30075 8 316 2.0E-258 T 23-04-2016 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 295 61.466 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 255 271 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15990 aaa7053d01b323ca159b05c06f4e3ab0 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 3.2E-68 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS10050 3a2aa4de86d60befdf20691b58717a41 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 283 8.9E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10050 3a2aa4de86d60befdf20691b58717a41 288 PANTHER PTHR30151 7 288 4.3E-136 T 23-04-2016 LT40_RS10050 3a2aa4de86d60befdf20691b58717a41 288 PANTHER PTHR30151:SF16 7 288 4.3E-136 T 23-04-2016 LT40_RS10050 3a2aa4de86d60befdf20691b58717a41 288 Gene3D G3DSA:1.10.3720.10 84 279 9.9E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10050 3a2aa4de86d60befdf20691b58717a41 288 SUPERFAMILY SSF161098 82 269 3.92E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05595 a17c3b0263043004b0b8c0c3592d62c4 269 PANTHER PTHR10438 222 268 3.9E-24 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LT40_RS05595 a17c3b0263043004b0b8c0c3592d62c4 269 PANTHER PTHR10438 150 198 3.9E-24 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LT40_RS05595 a17c3b0263043004b0b8c0c3592d62c4 269 SUPERFAMILY SSF52833 112 267 2.27E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS05595 a17c3b0263043004b0b8c0c3592d62c4 269 ProSitePatterns PS00194 Thioredoxin family active site. 163 181 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LT40_RS05595 a17c3b0263043004b0b8c0c3592d62c4 269 Pfam PF00578 AhpC/TSA family 138 248 1.9E-14 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS05595 a17c3b0263043004b0b8c0c3592d62c4 269 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 4 103 7.3E-7 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 LT40_RS05595 a17c3b0263043004b0b8c0c3592d62c4 269 PANTHER PTHR10438:SF244 222 268 3.9E-24 T 23-04-2016 LT40_RS05595 a17c3b0263043004b0b8c0c3592d62c4 269 PANTHER PTHR10438:SF244 150 198 3.9E-24 T 23-04-2016 LT40_RS05595 a17c3b0263043004b0b8c0c3592d62c4 269 Gene3D G3DSA:3.40.30.10 110 267 1.9E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 Pfam PF01820 D-ala D-ala ligase N-terminus 20 102 5.9E-21 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 20 312 7.6E-105 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 Gene3D G3DSA:3.30.1490.20 123 189 1.6E-22 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 SUPERFAMILY SSF52440 20 112 7.48E-31 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 79 90 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 257 285 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 PANTHER PTHR23132 20 314 8.9E-92 T 23-04-2016 LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 19 315 33.807 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 SUPERFAMILY SSF56059 113 311 3.2E-57 T 23-04-2016 LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 Gene3D G3DSA:3.30.470.20 101 119 1.4E-46 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 Gene3D G3DSA:3.30.470.20 190 312 1.4E-46 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 Pfam PF07478 D-ala D-ala ligase C-terminus 120 311 1.2E-53 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04065 6791eb417340ccf11a428ccb9a779aa3 319 Gene3D G3DSA:3.40.50.20 20 100 3.9E-29 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS11840 2b340d7299e6ccaf588b17eb684e1a53 151 SUPERFAMILY SSF143422 9 136 3.01E-28 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LT40_RS11840 2b340d7299e6ccaf588b17eb684e1a53 151 PANTHER PTHR36966:SF1 9 151 6.1E-24 T 23-04-2016 LT40_RS11840 2b340d7299e6ccaf588b17eb684e1a53 151 Gene3D G3DSA:3.30.70.1290 8 132 3.5E-15 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LT40_RS11840 2b340d7299e6ccaf588b17eb684e1a53 151 Pfam PF01797 Transposase IS200 like 21 128 9.2E-15 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LT40_RS11840 2b340d7299e6ccaf588b17eb684e1a53 151 SMART SM01321 16 130 2.8E-37 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LT40_RS11840 2b340d7299e6ccaf588b17eb684e1a53 151 PANTHER PTHR36966 9 151 6.1E-24 T 23-04-2016 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 PANTHER PTHR12338 405 894 8.2E-20 T 23-04-2016 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 Pfam PF03212 Pertactin 389 501 5.3E-29 T 23-04-2016 IPR004899 Pertactin, central region LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 SUPERFAMILY SSF51161 510 576 8.78E-5 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 PRINTS PR01484 Pertactin virulence factor family signature 850 875 1.2E-35 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 PRINTS PR01484 Pertactin virulence factor family signature 782 805 1.2E-35 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 PRINTS PR01484 Pertactin virulence factor family signature 875 895 1.2E-35 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 PRINTS PR01484 Pertactin virulence factor family signature 610 628 1.2E-35 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 PRINTS PR01484 Pertactin virulence factor family signature 630 650 1.2E-35 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 PRINTS PR01484 Pertactin virulence factor family signature 811 832 1.2E-35 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 PRINTS PR01484 Pertactin virulence factor family signature 763 780 1.2E-35 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 PRINTS PR01484 Pertactin virulence factor family signature 671 695 1.2E-35 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 Gene3D G3DSA:2.40.128.130 590 895 3.1E-88 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 SUPERFAMILY SSF51126 15 315 1.1E-36 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 SUPERFAMILY SSF51126 349 505 1.1E-36 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 SMART SM00869 630 884 5.6E-47 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 Pfam PF03797 Autotransporter beta-domain 630 878 1.3E-53 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 SUPERFAMILY SSF103515 605 895 2.88E-52 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 404 895 1.1E-106 T 23-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 PANTHER PTHR12338:SF7 405 894 8.2E-20 T 23-04-2016 LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 Gene3D G3DSA:2.160.20.20 342 516 7.9E-53 T 23-04-2016 IPR012332 P22 tailspike C-terminal domain-like LT40_RS20980 1a99734c5313bfddc7e1e278bcd8ee82 895 Gene3D G3DSA:2.160.20.20 17 310 7.9E-53 T 23-04-2016 IPR012332 P22 tailspike C-terminal domain-like LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 PANTHER PTHR24423:SF564 1 35 3.1E-132 T 23-04-2016 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 PANTHER PTHR24423:SF564 81 100 3.1E-132 T 23-04-2016 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 PANTHER PTHR24423:SF564 256 593 3.1E-132 T 23-04-2016 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 SUPERFAMILY SSF55785 251 367 1.06E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 Pfam PF00512 His Kinase A (phospho-acceptor) domain 376 443 1.4E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 PANTHER PTHR24423 1 35 3.1E-132 T 23-04-2016 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 PANTHER PTHR24423 81 100 3.1E-132 T 23-04-2016 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 PANTHER PTHR24423 256 593 3.1E-132 T 23-04-2016 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 Pfam PF16767 Sensor domain of alginate biosynthesis sensor protein KinB 39 158 8.6E-32 T 23-04-2016 IPR031909 Alginate biosynthesis sensor protein KinB, sensor domain LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 SMART SM00387 489 595 5.6E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 SMART SM00304 195 247 1.3E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 Gene3D G3DSA:3.30.450.20 252 367 3.7E-17 T 23-04-2016 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 SMART SM00091 258 323 3.3E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 257 370 4.0E-11 T 23-04-2016 IPR000014 PAS domain LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 Pfam PF00672 HAMP domain 176 244 6.7E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 Gene3D G3DSA:1.10.287.130 368 429 8.7E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 SMART SM00388 375 443 1.5E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 Gene3D G3DSA:3.30.565.10 430 595 1.3E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 SUPERFAMILY SSF158472 195 244 1.96E-7 T 23-04-2016 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 557 575 1.5E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 540 1.5E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 554 1.5E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 594 1.5E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 SUPERFAMILY SSF55874 432 593 3.93E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 490 594 4.6E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 Pfam PF08448 PAS fold 264 370 5.3E-12 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS15660 3240c63d1ff97425397bd13264bb54e9 595 SUPERFAMILY SSF47384 360 443 5.3E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 195 274 3.1E-32 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 Gene3D G3DSA:1.10.10.60 63 106 1.8E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 SMART SM00342 25 107 9.9E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 Gene3D G3DSA:3.30.160.70 107 193 6.4E-34 T 23-04-2016 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 197 275 3.7E-30 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 PANTHER PTHR10815:SF9 83 274 4.7E-108 T 23-04-2016 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 Pfam PF12833 Helix-turn-helix domain 31 108 6.7E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 SUPERFAMILY SSF46689 10 57 7.17E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 SUPERFAMILY SSF46767 194 275 1.19E-27 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 Gene3D G3DSA:1.10.10.60 8 62 7.6E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 245 251 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 Gene3D G3DSA:1.10.10.10 194 275 2.0E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 SUPERFAMILY SSF53155 114 193 5.49E-22 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 LT40_RS10815 3ef4fed20f52a9895470e71afbc838d9 282 PANTHER PTHR10815 83 274 4.7E-108 T 23-04-2016 LT40_RS08785 a48b8732ff8488d3e0542bb27f32cc80 252 Pfam PF00877 NlpC/P60 family 116 223 4.0E-12 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS08785 a48b8732ff8488d3e0542bb27f32cc80 252 Gene3D G3DSA:3.40.140.10 1 120 2.7E-28 T 23-04-2016 LT40_RS08785 a48b8732ff8488d3e0542bb27f32cc80 252 PANTHER PTHR34858:SF1 217 252 2.0E-50 T 23-04-2016 LT40_RS08785 a48b8732ff8488d3e0542bb27f32cc80 252 PANTHER PTHR34858:SF1 1 201 2.0E-50 T 23-04-2016 LT40_RS08785 a48b8732ff8488d3e0542bb27f32cc80 252 Gene3D G3DSA:3.90.1720.10 121 247 3.2E-10 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS08785 a48b8732ff8488d3e0542bb27f32cc80 252 SUPERFAMILY SSF102712 1 137 9.42E-25 T 23-04-2016 LT40_RS08785 a48b8732ff8488d3e0542bb27f32cc80 252 SUPERFAMILY SSF54001 112 247 8.44E-9 T 23-04-2016 LT40_RS08785 a48b8732ff8488d3e0542bb27f32cc80 252 Pfam PF14464 Prokaryotic homologs of the JAB domain 4 100 1.1E-17 T 23-04-2016 IPR028090 JAB domain, prokaryotic LT40_RS08785 a48b8732ff8488d3e0542bb27f32cc80 252 PANTHER PTHR34858 217 252 2.0E-50 T 23-04-2016 LT40_RS08785 a48b8732ff8488d3e0542bb27f32cc80 252 PANTHER PTHR34858 1 201 2.0E-50 T 23-04-2016 LT40_RS08785 a48b8732ff8488d3e0542bb27f32cc80 252 SMART SM00232 1 124 1.4E-11 T 23-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 LT40_RS05625 9cecf2ba784aa2c8ece592160e1e56d7 329 SUPERFAMILY SSF52540 4 240 2.28E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05625 9cecf2ba784aa2c8ece592160e1e56d7 329 Pfam PF08402 TOBE domain 257 325 3.1E-9 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LT40_RS05625 9cecf2ba784aa2c8ece592160e1e56d7 329 Gene3D G3DSA:3.40.50.300 4 237 5.3E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05625 9cecf2ba784aa2c8ece592160e1e56d7 329 PANTHER PTHR24220:SF150 5 281 2.0E-121 T 23-04-2016 LT40_RS05625 9cecf2ba784aa2c8ece592160e1e56d7 329 SUPERFAMILY SSF50331 255 325 4.48E-8 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS05625 9cecf2ba784aa2c8ece592160e1e56d7 329 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS05625 9cecf2ba784aa2c8ece592160e1e56d7 329 Pfam PF00005 ABC transporter 20 161 4.8E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS05625 9cecf2ba784aa2c8ece592160e1e56d7 329 PANTHER PTHR24220 5 281 2.0E-121 T 23-04-2016 LT40_RS05625 9cecf2ba784aa2c8ece592160e1e56d7 329 SMART SM00382 28 211 3.7E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS07730 56ab0fd3b3cc736492523969623a3ce6 317 Pfam PF00682 HMGL-like 10 280 6.4E-46 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 LT40_RS07730 56ab0fd3b3cc736492523969623a3ce6 317 PANTHER PTHR10277:SF1 1 299 1.7E-118 T 23-04-2016 LT40_RS07730 56ab0fd3b3cc736492523969623a3ce6 317 SUPERFAMILY SSF51569 5 300 2.78E-73 T 23-04-2016 LT40_RS07730 56ab0fd3b3cc736492523969623a3ce6 317 Gene3D G3DSA:3.20.20.70 8 291 2.6E-69 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS07730 56ab0fd3b3cc736492523969623a3ce6 317 PANTHER PTHR10277 1 299 1.7E-118 T 23-04-2016 LT40_RS16490 ffe2935da67bf34f3302a1a8a8488133 206 Gene3D G3DSA:3.40.50.300 88 203 7.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16490 ffe2935da67bf34f3302a1a8a8488133 206 Gene3D G3DSA:3.40.50.300 2 28 7.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16490 ffe2935da67bf34f3302a1a8a8488133 206 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 184 7.1E-71 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 LT40_RS16490 ffe2935da67bf34f3302a1a8a8488133 206 SMART SM00072 5 187 7.4E-58 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LT40_RS16490 ffe2935da67bf34f3302a1a8a8488133 206 Hamap MF_00328 Guanylate kinase [gmk]. 4 187 35.79 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 LT40_RS16490 ffe2935da67bf34f3302a1a8a8488133 206 SUPERFAMILY SSF52540 4 189 1.21E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16490 ffe2935da67bf34f3302a1a8a8488133 206 PANTHER PTHR23117 1 204 9.5E-90 T 23-04-2016 LT40_RS16490 ffe2935da67bf34f3302a1a8a8488133 206 Gene3D G3DSA:3.30.63.10 35 87 7.7E-26 T 23-04-2016 LT40_RS16490 ffe2935da67bf34f3302a1a8a8488133 206 PANTHER PTHR23117:SF13 1 204 9.5E-90 T 23-04-2016 LT40_RS16490 ffe2935da67bf34f3302a1a8a8488133 206 Pfam PF00625 Guanylate kinase 7 185 4.4E-51 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LT40_RS16490 ffe2935da67bf34f3302a1a8a8488133 206 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 SUPERFAMILY SSF55961 168 413 7.85E-52 T 23-04-2016 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 SUPERFAMILY SSF50022 24 166 5.63E-43 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 Pfam PF00355 Rieske [2Fe-2S] domain 56 131 6.1E-15 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 Gene3D G3DSA:3.90.380.10 159 410 7.3E-18 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 PANTHER PTHR21266:SF2 26 410 3.8E-107 T 23-04-2016 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 189 412 9.3E-46 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 PANTHER PTHR21266 26 410 3.8E-107 T 23-04-2016 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 Gene3D G3DSA:2.102.10.10 55 158 1.2E-23 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 112 132 1.6E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 1.6E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 70 85 1.6E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 40 65 1.6E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 91 111 1.6E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS17560 c788db635ac790a7ea2b4e6d6b2a344e 431 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 1.6E-27 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS14830 04dee5d421fba31e0a3eb1f7aa5b670d 276 PANTHER PTHR35936:SF3 1 253 2.4E-43 T 23-04-2016 LT40_RS14830 04dee5d421fba31e0a3eb1f7aa5b670d 276 PANTHER PTHR35936 1 253 2.4E-43 T 23-04-2016 LT40_RS14830 04dee5d421fba31e0a3eb1f7aa5b670d 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 242 8.1E-27 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS14830 04dee5d421fba31e0a3eb1f7aa5b670d 276 Gene3D G3DSA:3.40.190.10 28 130 5.7E-19 T 23-04-2016 LT40_RS14830 04dee5d421fba31e0a3eb1f7aa5b670d 276 Gene3D G3DSA:3.40.190.10 131 186 7.4E-7 T 23-04-2016 LT40_RS14830 04dee5d421fba31e0a3eb1f7aa5b670d 276 SUPERFAMILY SSF53850 23 242 4.46E-44 T 23-04-2016 LT40_RS14830 04dee5d421fba31e0a3eb1f7aa5b670d 276 SMART SM00062 24 246 7.9E-13 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS01180 953bf05317ab7f2d60b3c46ccd1b1958 769 PANTHER PTHR30519:SF0 1 769 0.0 T 23-04-2016 LT40_RS01180 953bf05317ab7f2d60b3c46ccd1b1958 769 SUPERFAMILY SSF51726 405 766 9.42E-116 T 23-04-2016 LT40_RS01180 953bf05317ab7f2d60b3c46ccd1b1958 769 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 766 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LT40_RS01180 953bf05317ab7f2d60b3c46ccd1b1958 769 PIRSF PIRSF000382 1 769 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LT40_RS01180 953bf05317ab7f2d60b3c46ccd1b1958 769 SUPERFAMILY SSF51726 3 403 1.44E-112 T 23-04-2016 LT40_RS01180 953bf05317ab7f2d60b3c46ccd1b1958 769 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 767 36.86 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LT40_RS01180 953bf05317ab7f2d60b3c46ccd1b1958 769 Gene3D G3DSA:3.20.20.210 4 398 2.7E-151 T 23-04-2016 LT40_RS01180 953bf05317ab7f2d60b3c46ccd1b1958 769 PANTHER PTHR30519 1 769 0.0 T 23-04-2016 LT40_RS01180 953bf05317ab7f2d60b3c46ccd1b1958 769 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 321 7.2E-119 T 23-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LT40_RS01180 953bf05317ab7f2d60b3c46ccd1b1958 769 Gene3D G3DSA:3.20.20.210 401 768 9.8E-130 T 23-04-2016 LT40_RS01180 953bf05317ab7f2d60b3c46ccd1b1958 769 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 440 762 5.2E-147 T 23-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 LT40_RS12820 d736213a2119685d825bf96282ee7814 460 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 9 452 37.215 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 LT40_RS12820 d736213a2119685d825bf96282ee7814 460 Pfam PF01743 Poly A polymerase head domain 56 189 4.0E-38 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 LT40_RS12820 d736213a2119685d825bf96282ee7814 460 SUPERFAMILY SSF81301 29 186 6.65E-39 T 23-04-2016 LT40_RS12820 d736213a2119685d825bf96282ee7814 460 Pfam PF12626 Polymerase A arginine-rich C-terminus 332 447 7.6E-44 T 23-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain LT40_RS12820 d736213a2119685d825bf96282ee7814 460 Gene3D G3DSA:1.10.3090.10 189 423 1.0E-52 T 23-04-2016 LT40_RS12820 d736213a2119685d825bf96282ee7814 460 PANTHER PTHR13734:SF47 14 279 4.2E-121 T 23-04-2016 LT40_RS12820 d736213a2119685d825bf96282ee7814 460 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 25 456 1.3E-188 T 23-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 LT40_RS12820 d736213a2119685d825bf96282ee7814 460 PANTHER PTHR13734 14 279 4.2E-121 T 23-04-2016 LT40_RS12820 d736213a2119685d825bf96282ee7814 460 Gene3D G3DSA:3.30.460.10 37 188 2.1E-48 T 23-04-2016 LT40_RS12820 d736213a2119685d825bf96282ee7814 460 SUPERFAMILY SSF81891 187 421 6.15E-50 T 23-04-2016 LT40_RS12820 d736213a2119685d825bf96282ee7814 460 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 216 278 4.5E-21 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LT40_RS03770 1a3b09e4a3c5c5c58b8fd716aa24f3bf 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 2 83 1.3E-25 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS03770 1a3b09e4a3c5c5c58b8fd716aa24f3bf 90 Pfam PF00381 PTS HPr component phosphorylation site 5 83 3.5E-26 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS03770 1a3b09e4a3c5c5c58b8fd716aa24f3bf 90 SUPERFAMILY SSF55594 1 88 1.11E-26 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS03770 1a3b09e4a3c5c5c58b8fd716aa24f3bf 90 PANTHER PTHR33705:SF2 1 90 1.8E-38 T 23-04-2016 LT40_RS03770 1a3b09e4a3c5c5c58b8fd716aa24f3bf 90 Gene3D G3DSA:3.30.1340.10 1 88 3.2E-28 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS03770 1a3b09e4a3c5c5c58b8fd716aa24f3bf 90 PRINTS PR00107 Phosphocarrier protein signature 39 54 1.1E-10 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS03770 1a3b09e4a3c5c5c58b8fd716aa24f3bf 90 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.1E-10 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS03770 1a3b09e4a3c5c5c58b8fd716aa24f3bf 90 PRINTS PR00107 Phosphocarrier protein signature 54 71 1.1E-10 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like LT40_RS03770 1a3b09e4a3c5c5c58b8fd716aa24f3bf 90 PANTHER PTHR33705 1 90 1.8E-38 T 23-04-2016 LT40_RS03770 1a3b09e4a3c5c5c58b8fd716aa24f3bf 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 23-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LT40_RS00420 4363a56f75bec1a0ec2e5cb9f417b315 247 Hamap MF_01220_B Uridylate kinase [pyrH]. 10 243 43.945 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LT40_RS00420 4363a56f75bec1a0ec2e5cb9f417b315 247 PIRSF PIRSF005650 8 247 1.5E-89 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LT40_RS00420 4363a56f75bec1a0ec2e5cb9f417b315 247 Pfam PF00696 Amino acid kinase family 13 222 2.7E-26 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS00420 4363a56f75bec1a0ec2e5cb9f417b315 247 SUPERFAMILY SSF53633 10 242 2.49E-74 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS00420 4363a56f75bec1a0ec2e5cb9f417b315 247 Gene3D G3DSA:3.40.1160.10 7 243 1.1E-85 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS00420 4363a56f75bec1a0ec2e5cb9f417b315 247 PANTHER PTHR21499 1 244 5.3E-113 T 23-04-2016 LT40_RS00420 4363a56f75bec1a0ec2e5cb9f417b315 247 PANTHER PTHR21499:SF23 1 244 5.3E-113 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LT40_RS00420 4363a56f75bec1a0ec2e5cb9f417b315 247 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 12 243 1.9E-98 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 LT40_RS19070 2ed2f72d89b0cdf57d55ff43498c14ed 360 Pfam PF00296 Luciferase-like monooxygenase 1 318 7.0E-68 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS19070 2ed2f72d89b0cdf57d55ff43498c14ed 360 PANTHER PTHR30011 1 356 6.1E-128 T 23-04-2016 LT40_RS19070 2ed2f72d89b0cdf57d55ff43498c14ed 360 SUPERFAMILY SSF51679 1 350 4.32E-77 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS19070 2ed2f72d89b0cdf57d55ff43498c14ed 360 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 1 353 7.6E-212 T 23-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 LT40_RS19070 2ed2f72d89b0cdf57d55ff43498c14ed 360 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 1 358 68.652 T 23-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 LT40_RS19070 2ed2f72d89b0cdf57d55ff43498c14ed 360 Gene3D G3DSA:3.20.20.30 1 352 2.9E-84 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS19070 2ed2f72d89b0cdf57d55ff43498c14ed 360 PANTHER PTHR30011:SF1 1 356 6.1E-128 T 23-04-2016 LT40_RS01435 7525a367e36047b0912ec308c38fc06e 289 Gene3D G3DSA:2.60.120.280 38 170 3.2E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LT40_RS01435 7525a367e36047b0912ec308c38fc06e 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 1.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS01435 7525a367e36047b0912ec308c38fc06e 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 1.2E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS01435 7525a367e36047b0912ec308c38fc06e 289 PANTHER PTHR11019:SF45 9 286 2.5E-61 T 23-04-2016 LT40_RS01435 7525a367e36047b0912ec308c38fc06e 289 SUPERFAMILY SSF51182 40 130 1.16E-8 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS01435 7525a367e36047b0912ec308c38fc06e 289 PANTHER PTHR11019 9 286 2.5E-61 T 23-04-2016 LT40_RS01435 7525a367e36047b0912ec308c38fc06e 289 Gene3D G3DSA:1.10.10.60 241 287 8.3E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01435 7525a367e36047b0912ec308c38fc06e 289 SMART SM00342 203 286 2.0E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS01435 7525a367e36047b0912ec308c38fc06e 289 SUPERFAMILY SSF46689 242 287 1.61E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01435 7525a367e36047b0912ec308c38fc06e 289 Pfam PF02311 AraC-like ligand binding domain 34 161 1.4E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LT40_RS01435 7525a367e36047b0912ec308c38fc06e 289 Pfam PF12833 Helix-turn-helix domain 209 286 1.8E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS16950 fdfe5860eace1a07c5b7d8eccfd6e5dd 541 Gene3D G3DSA:1.10.3720.10 10 258 1.9E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16950 fdfe5860eace1a07c5b7d8eccfd6e5dd 541 Gene3D G3DSA:1.10.3720.10 283 533 1.1E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16950 fdfe5860eace1a07c5b7d8eccfd6e5dd 541 PANTHER PTHR30183:SF2 403 539 3.4E-262 T 23-04-2016 LT40_RS16950 fdfe5860eace1a07c5b7d8eccfd6e5dd 541 SUPERFAMILY SSF161098 8 256 5.36E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16950 fdfe5860eace1a07c5b7d8eccfd6e5dd 541 PANTHER PTHR30183 2 386 3.4E-262 T 23-04-2016 LT40_RS16950 fdfe5860eace1a07c5b7d8eccfd6e5dd 541 PANTHER PTHR30183:SF2 2 386 3.4E-262 T 23-04-2016 LT40_RS16950 fdfe5860eace1a07c5b7d8eccfd6e5dd 541 SUPERFAMILY SSF161098 279 531 5.63E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16950 fdfe5860eace1a07c5b7d8eccfd6e5dd 541 PANTHER PTHR30183 403 539 3.4E-262 T 23-04-2016 LT40_RS16950 fdfe5860eace1a07c5b7d8eccfd6e5dd 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 250 1.1E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16950 fdfe5860eace1a07c5b7d8eccfd6e5dd 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 358 523 8.2E-7 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15350 880567026732f42d4bd7be24fff849d4 288 PANTHER PTHR30406:SF1 10 285 2.5E-153 T 23-04-2016 LT40_RS15350 880567026732f42d4bd7be24fff849d4 288 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 20 275 2.6E-96 T 23-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 LT40_RS15350 880567026732f42d4bd7be24fff849d4 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 278 1.8E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15350 880567026732f42d4bd7be24fff849d4 288 SUPERFAMILY SSF161098 21 273 3.92E-54 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15350 880567026732f42d4bd7be24fff849d4 288 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 21 278 2.3E-119 T 23-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 LT40_RS15350 880567026732f42d4bd7be24fff849d4 288 Gene3D G3DSA:1.10.3720.10 21 280 2.4E-52 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15350 880567026732f42d4bd7be24fff849d4 288 PANTHER PTHR30406 10 285 2.5E-153 T 23-04-2016 LT40_RS12585 fe5c1a90ea883e5c33fd4ab0183fc2f1 234 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS12585 fe5c1a90ea883e5c33fd4ab0183fc2f1 234 SUPERFAMILY SSF54292 2 103 1.21E-25 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS12585 fe5c1a90ea883e5c33fd4ab0183fc2f1 234 Pfam PF13534 4Fe-4S dicluster domain 144 217 5.8E-9 T 23-04-2016 LT40_RS12585 fe5c1a90ea883e5c33fd4ab0183fc2f1 234 PANTHER PTHR11921:SF29 1 230 1.0E-128 T 23-04-2016 LT40_RS12585 fe5c1a90ea883e5c33fd4ab0183fc2f1 234 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 6 226 4.1E-83 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 LT40_RS12585 fe5c1a90ea883e5c33fd4ab0183fc2f1 234 Gene3D G3DSA:1.10.1060.10 105 231 2.7E-46 T 23-04-2016 LT40_RS12585 fe5c1a90ea883e5c33fd4ab0183fc2f1 234 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 107 4.8E-30 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 LT40_RS12585 fe5c1a90ea883e5c33fd4ab0183fc2f1 234 SUPERFAMILY SSF46548 104 231 3.84E-38 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 LT40_RS12585 fe5c1a90ea883e5c33fd4ab0183fc2f1 234 PANTHER PTHR11921 1 230 1.0E-128 T 23-04-2016 LT40_RS12585 fe5c1a90ea883e5c33fd4ab0183fc2f1 234 Gene3D G3DSA:3.10.20.30 2 103 8.1E-35 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS11430 30576c75403c03388dafb2ae7e32a457 467 Gene3D G3DSA:1.10.10.10 13 75 1.1E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11430 30576c75403c03388dafb2ae7e32a457 467 Pfam PF00155 Aminotransferase class I and II 148 458 3.0E-6 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS11430 30576c75403c03388dafb2ae7e32a457 467 SMART SM00345 17 76 2.8E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS11430 30576c75403c03388dafb2ae7e32a457 467 SUPERFAMILY SSF46785 13 80 1.26E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11430 30576c75403c03388dafb2ae7e32a457 467 Gene3D G3DSA:3.40.640.10 141 345 2.3E-21 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS11430 30576c75403c03388dafb2ae7e32a457 467 PANTHER PTHR11751:SF314 83 458 2.4E-14 T 23-04-2016 LT40_RS11430 30576c75403c03388dafb2ae7e32a457 467 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 73 3.2E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS11430 30576c75403c03388dafb2ae7e32a457 467 SUPERFAMILY SSF53383 107 463 4.94E-46 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS11430 30576c75403c03388dafb2ae7e32a457 467 Gene3D G3DSA:3.90.1150.10 346 464 5.1E-8 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS11430 30576c75403c03388dafb2ae7e32a457 467 PANTHER PTHR11751 83 458 2.4E-14 T 23-04-2016 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 180 320 1.9E-46 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 188 209 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 133 153 1.1E-40 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 1.1E-40 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 173 197 1.1E-40 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 59 86 1.1E-40 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 238 255 1.1E-40 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 198 222 1.1E-40 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 SUPERFAMILY SSF48179 179 331 8.84E-50 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 Gene3D G3DSA:1.10.1040.10 184 325 2.0E-51 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 PIRSF PIRSF000114 1 332 4.0E-107 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 159 4.4E-49 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 5 322 35.416 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 PANTHER PTHR11728 7 324 3.2E-122 T 23-04-2016 LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 SUPERFAMILY SSF51735 7 178 9.87E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS05945 832498663d04e37dbd1ba7aabf4c55e3 341 Gene3D G3DSA:3.40.50.720 2 183 5.1E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12730 e2c6073fd29e7f60e05a1b5d0a786570 337 PANTHER PTHR19372:SF1 13 332 1.9E-145 T 23-04-2016 LT40_RS12730 e2c6073fd29e7f60e05a1b5d0a786570 337 PANTHER PTHR19372 13 332 1.9E-145 T 23-04-2016 LT40_RS12730 e2c6073fd29e7f60e05a1b5d0a786570 337 SUPERFAMILY SSF56524 82 333 1.7E-89 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LT40_RS12730 e2c6073fd29e7f60e05a1b5d0a786570 337 Pfam PF00174 Oxidoreductase molybdopterin binding domain 114 271 3.2E-27 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LT40_RS12730 e2c6073fd29e7f60e05a1b5d0a786570 337 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 7 337 60.139 T 23-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 LT40_RS12730 e2c6073fd29e7f60e05a1b5d0a786570 337 Gene3D G3DSA:3.90.420.10 85 335 1.7E-68 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LT40_RS07420 2f9c49dc000105936882d8839633b535 252 PANTHER PTHR10804:SF75 8 251 5.6E-129 T 23-04-2016 LT40_RS07420 2f9c49dc000105936882d8839633b535 252 Gene3D G3DSA:3.90.230.10 8 251 1.4E-90 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS07420 2f9c49dc000105936882d8839633b535 252 PANTHER PTHR10804 8 251 5.6E-129 T 23-04-2016 LT40_RS07420 2f9c49dc000105936882d8839633b535 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 9 251 2.3E-90 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LT40_RS07420 2f9c49dc000105936882d8839633b535 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 1.2E-22 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LT40_RS07420 2f9c49dc000105936882d8839633b535 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 164 176 1.2E-22 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LT40_RS07420 2f9c49dc000105936882d8839633b535 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 94 110 1.2E-22 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LT40_RS07420 2f9c49dc000105936882d8839633b535 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 195 207 1.2E-22 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LT40_RS07420 2f9c49dc000105936882d8839633b535 252 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 170 188 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LT40_RS07420 2f9c49dc000105936882d8839633b535 252 Pfam PF00557 Metallopeptidase family M24 15 244 3.1E-52 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS07420 2f9c49dc000105936882d8839633b535 252 Hamap MF_01974 Methionine aminopeptidase [map]. 5 252 37.606 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LT40_RS07420 2f9c49dc000105936882d8839633b535 252 SUPERFAMILY SSF55920 8 252 2.22E-87 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS00370 0715dbf6f4ab5fdde29ab4c4159a07c0 115 Gene3D G3DSA:3.40.30.10 4 114 1.0E-42 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS00370 0715dbf6f4ab5fdde29ab4c4159a07c0 115 PANTHER PTHR30041:SF3 1 114 1.2E-43 T 23-04-2016 LT40_RS00370 0715dbf6f4ab5fdde29ab4c4159a07c0 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 111 9.2E-29 T 23-04-2016 IPR006504 Transcriptional regulator Spx/MgsR LT40_RS00370 0715dbf6f4ab5fdde29ab4c4159a07c0 115 SUPERFAMILY SSF52833 3 114 2.08E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS00370 0715dbf6f4ab5fdde29ab4c4159a07c0 115 Pfam PF03960 ArsC family 10 112 1.8E-17 T 23-04-2016 IPR006660 Arsenate reductase-like LT40_RS00370 0715dbf6f4ab5fdde29ab4c4159a07c0 115 PANTHER PTHR30041 1 114 1.2E-43 T 23-04-2016 LT40_RS03070 45a874ffa17fc242d9d465ec60a13f6e 342 SMART SM00062 37 266 2.0E-49 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS03070 45a874ffa17fc242d9d465ec60a13f6e 342 PANTHER PTHR30085:SF5 1 311 5.6E-176 T 23-04-2016 LT40_RS03070 45a874ffa17fc242d9d465ec60a13f6e 342 PANTHER PTHR30085 1 311 5.6E-176 T 23-04-2016 LT40_RS03070 45a874ffa17fc242d9d465ec60a13f6e 342 Gene3D G3DSA:3.40.190.10 16 144 1.1E-21 T 23-04-2016 LT40_RS03070 45a874ffa17fc242d9d465ec60a13f6e 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 248 3.8E-29 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS03070 45a874ffa17fc242d9d465ec60a13f6e 342 SUPERFAMILY SSF53850 28 254 7.25E-47 T 23-04-2016 LT40_RS03070 45a874ffa17fc242d9d465ec60a13f6e 342 Gene3D G3DSA:3.40.190.10 145 228 3.7E-12 T 23-04-2016 LT40_RS16910 7f70c47442e1f7fd4e8ccb17e20c41d5 205 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 14 198 1.1E-47 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LT40_RS16910 7f70c47442e1f7fd4e8ccb17e20c41d5 205 PANTHER PTHR23407:SF1 5 203 5.7E-56 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LT40_RS16910 7f70c47442e1f7fd4e8ccb17e20c41d5 205 PANTHER PTHR23407 5 203 5.7E-56 T 23-04-2016 LT40_RS16910 7f70c47442e1f7fd4e8ccb17e20c41d5 205 PIRSF PIRSF006806 11 201 2.5E-37 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LT40_RS16910 7f70c47442e1f7fd4e8ccb17e20c41d5 205 SUPERFAMILY SSF100950 13 204 7.67E-53 T 23-04-2016 LT40_RS16910 7f70c47442e1f7fd4e8ccb17e20c41d5 205 Gene3D G3DSA:3.40.50.10420 14 203 1.4E-56 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain LT40_RS16910 7f70c47442e1f7fd4e8ccb17e20c41d5 205 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 14 198 3.3E-41 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase LT40_RS03985 f448180266bc57c9e1a49749359cf1f7 192 PANTHER PTHR34606:SF4 14 192 4.2E-73 T 23-04-2016 LT40_RS03985 f448180266bc57c9e1a49749359cf1f7 192 PANTHER PTHR34606 14 192 4.2E-73 T 23-04-2016 LT40_RS03985 f448180266bc57c9e1a49749359cf1f7 192 Pfam PF04972 BON domain 125 190 9.7E-15 T 23-04-2016 IPR007055 BON domain LT40_RS03985 f448180266bc57c9e1a49749359cf1f7 192 Pfam PF04972 BON domain 46 115 3.1E-12 T 23-04-2016 IPR007055 BON domain LT40_RS03985 f448180266bc57c9e1a49749359cf1f7 192 SMART SM00749 51 115 9.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LT40_RS03985 f448180266bc57c9e1a49749359cf1f7 192 SMART SM00749 130 192 0.0071 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LT40_RS12775 093693909e909fb38b3e55ba7b082ce3 514 PANTHER PTHR12083:SF8 393 507 9.1E-159 T 23-04-2016 LT40_RS12775 093693909e909fb38b3e55ba7b082ce3 514 PANTHER PTHR12083:SF8 8 371 9.1E-159 T 23-04-2016 LT40_RS12775 093693909e909fb38b3e55ba7b082ce3 514 PANTHER PTHR12083 8 371 9.1E-159 T 23-04-2016 LT40_RS12775 093693909e909fb38b3e55ba7b082ce3 514 Pfam PF13671 AAA domain 339 481 3.2E-34 T 23-04-2016 LT40_RS12775 093693909e909fb38b3e55ba7b082ce3 514 SUPERFAMILY SSF56112 12 294 8.46E-26 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS12775 093693909e909fb38b3e55ba7b082ce3 514 SUPERFAMILY SSF52540 338 511 7.88E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12775 093693909e909fb38b3e55ba7b082ce3 514 Gene3D G3DSA:3.90.1200.10 123 294 1.0E-11 T 23-04-2016 LT40_RS12775 093693909e909fb38b3e55ba7b082ce3 514 PANTHER PTHR12083 393 507 9.1E-159 T 23-04-2016 LT40_RS12775 093693909e909fb38b3e55ba7b082ce3 514 Gene3D G3DSA:3.40.50.300 338 467 1.7E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12775 093693909e909fb38b3e55ba7b082ce3 514 Pfam PF01636 Phosphotransferase enzyme family 59 280 1.3E-9 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 SMART SM00345 11 70 1.6E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 PANTHER PTHR11751:SF277 9 73 1.6E-38 T 23-04-2016 LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 PANTHER PTHR11751:SF277 89 111 1.6E-38 T 23-04-2016 LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 SUPERFAMILY SSF46785 5 74 4.48E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 70 1.1E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 Gene3D G3DSA:1.10.10.10 4 75 8.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 Pfam PF07729 FCD domain 95 223 5.0E-24 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 SUPERFAMILY SSF48008 92 231 1.75E-25 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 SMART SM00895 95 224 1.4E-23 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 3.4E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 3.4E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 PANTHER PTHR11751 9 73 1.6E-38 T 23-04-2016 LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 PANTHER PTHR11751 89 111 1.6E-38 T 23-04-2016 LT40_RS20715 efc6e3bd6bc568fdc6738c109874ce9e 250 Gene3D G3DSA:1.20.120.530 90 233 8.9E-30 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS20125 9794c865a5992a999aac3b46693a3245 168 Gene3D G3DSA:1.10.1740.10 8 81 2.4E-11 T 23-04-2016 LT40_RS20125 9794c865a5992a999aac3b46693a3245 168 PANTHER PTHR30173 9 164 2.4E-37 T 23-04-2016 LT40_RS20125 9794c865a5992a999aac3b46693a3245 168 SUPERFAMILY SSF88659 106 165 2.62E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS20125 9794c865a5992a999aac3b46693a3245 168 SUPERFAMILY SSF88946 5 78 6.28E-13 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS20125 9794c865a5992a999aac3b46693a3245 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 160 1.8E-17 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS20125 9794c865a5992a999aac3b46693a3245 168 Gene3D G3DSA:1.10.10.10 110 161 7.6E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS20125 9794c865a5992a999aac3b46693a3245 168 Pfam PF08281 Sigma-70, region 4 112 164 1.5E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS20125 9794c865a5992a999aac3b46693a3245 168 Pfam PF04542 Sigma-70 region 2 12 81 7.3E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS20125 9794c865a5992a999aac3b46693a3245 168 PANTHER PTHR30173:SF9 9 164 2.4E-37 T 23-04-2016 LT40_RS10575 7a8d579d1b40c0856f160eda0f0cba55 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 2.1E-17 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS10575 7a8d579d1b40c0856f160eda0f0cba55 333 PANTHER PTHR30146 1 330 7.8E-114 T 23-04-2016 LT40_RS10575 7a8d579d1b40c0856f160eda0f0cba55 333 Gene3D G3DSA:3.40.50.2300 59 166 1.8E-26 T 23-04-2016 LT40_RS10575 7a8d579d1b40c0856f160eda0f0cba55 333 SUPERFAMILY SSF53822 63 329 1.5E-79 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS10575 7a8d579d1b40c0856f160eda0f0cba55 333 SMART SM00354 1 71 6.4E-20 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS10575 7a8d579d1b40c0856f160eda0f0cba55 333 Pfam PF13377 Periplasmic binding protein-like domain 167 328 6.2E-47 T 23-04-2016 LT40_RS10575 7a8d579d1b40c0856f160eda0f0cba55 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS10575 7a8d579d1b40c0856f160eda0f0cba55 333 Gene3D G3DSA:1.10.260.40 4 58 8.0E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS10575 7a8d579d1b40c0856f160eda0f0cba55 333 Gene3D G3DSA:3.40.50.2300 167 329 2.0E-65 T 23-04-2016 LT40_RS10575 7a8d579d1b40c0856f160eda0f0cba55 333 SUPERFAMILY SSF47413 3 59 1.13E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS10575 7a8d579d1b40c0856f160eda0f0cba55 333 PANTHER PTHR30146:SF4 1 330 7.8E-114 T 23-04-2016 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 PANTHER PTHR11831:SF4 1 206 9.7E-88 T 23-04-2016 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 PANTHER PTHR11831 1 206 9.7E-88 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 6.8E-77 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 SMART SM00363 96 160 2.4E-16 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 SMART SM01390 3 95 4.0E-46 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 SUPERFAMILY SSF55174 3 206 3.01E-68 T 23-04-2016 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 Gene3D G3DSA:1.10.1050.10 1 98 3.7E-40 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 34.347 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 Pfam PF01479 S4 domain 97 143 1.7E-18 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 Gene3D G3DSA:3.10.290.10 99 198 2.4E-33 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS18470 121b90e0457e2caff264bc0871e689f7 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 4.0E-28 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 274 1.7E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 SUPERFAMILY SSF55874 286 420 1.3E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 SMART SM00304 156 210 3.0E-4 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 402 2.7E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 380 2.7E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 2.7E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 421 2.7E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 PANTHER PTHR24423 2 13 1.2E-48 T 23-04-2016 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 PANTHER PTHR24423 150 420 1.2E-48 T 23-04-2016 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 Pfam PF00672 HAMP domain 137 206 2.1E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 SUPERFAMILY SSF47384 194 272 8.24E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 SMART SM00387 320 423 4.3E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 420 1.2E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 SMART SM00388 211 276 7.2E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 Gene3D G3DSA:1.10.287.130 204 272 2.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09495 43949b305d04d0c3bed5379b22ed7783 423 Gene3D G3DSA:3.30.565.10 286 420 1.5E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08780 dc233e903e939e525f19ead42bd97a81 249 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 7 245 9.7E-57 T 23-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail LT40_RS08780 dc233e903e939e525f19ead42bd97a81 249 Pfam PF05100 Phage minor tail protein L 25 245 1.8E-68 T 23-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail LT40_RS04565 d6136b470f08b281077e545ea8b1c222 327 PANTHER PTHR30349:SF29 1 288 1.0E-183 T 23-04-2016 LT40_RS04565 d6136b470f08b281077e545ea8b1c222 327 Gene3D G3DSA:3.40.190.10 125 209 9.3E-5 T 23-04-2016 LT40_RS04565 d6136b470f08b281077e545ea8b1c222 327 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 324 1.7E-24 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 LT40_RS04565 d6136b470f08b281077e545ea8b1c222 327 PANTHER PTHR30349 1 288 1.0E-183 T 23-04-2016 LT40_RS04565 d6136b470f08b281077e545ea8b1c222 327 PIRSF PIRSF017082 1 327 1.0E-80 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 LT40_RS04565 d6136b470f08b281077e545ea8b1c222 327 SUPERFAMILY SSF53850 41 231 1.09E-11 T 23-04-2016 LT40_RS15875 bd97b5607203d40233d1ca41bade299f 333 PANTHER PTHR30137 1 331 4.0E-138 T 23-04-2016 LT40_RS15875 bd97b5607203d40233d1ca41bade299f 333 SUPERFAMILY SSF51679 8 329 9.42E-89 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS15875 bd97b5607203d40233d1ca41bade299f 333 Pfam PF00296 Luciferase-like monooxygenase 17 301 9.5E-43 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS15875 bd97b5607203d40233d1ca41bade299f 333 Gene3D G3DSA:3.20.20.30 8 329 4.1E-92 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS15875 bd97b5607203d40233d1ca41bade299f 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 10 329 5.6E-132 T 23-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 LT40_RS15875 bd97b5607203d40233d1ca41bade299f 333 PANTHER PTHR30137:SF2 1 331 4.0E-138 T 23-04-2016 LT40_RS18400 b8360a8c0044980ac9f91e08635fcea0 88 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 1.9E-13 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18400 b8360a8c0044980ac9f91e08635fcea0 88 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 1.9E-13 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18400 b8360a8c0044980ac9f91e08635fcea0 88 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 1.9E-13 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18400 b8360a8c0044980ac9f91e08635fcea0 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 84 26.39 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18400 b8360a8c0044980ac9f91e08635fcea0 88 Gene3D G3DSA:2.40.50.140 9 85 6.1E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS18400 b8360a8c0044980ac9f91e08635fcea0 88 SUPERFAMILY SSF50249 9 85 6.85E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS18400 b8360a8c0044980ac9f91e08635fcea0 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 9 79 1.0E-34 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18400 b8360a8c0044980ac9f91e08635fcea0 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 9 79 1.3E-37 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18400 b8360a8c0044980ac9f91e08635fcea0 88 PANTHER PTHR10744 9 87 4.4E-43 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18400 b8360a8c0044980ac9f91e08635fcea0 88 Pfam PF00366 Ribosomal protein S17 13 79 9.6E-34 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS03220 a195187a608f8065b2b3ee04a980380a 240 PANTHER PTHR26402 6 239 1.4E-134 T 23-04-2016 LT40_RS03220 a195187a608f8065b2b3ee04a980380a 240 SUPERFAMILY SSF52172 5 132 2.13E-42 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS03220 a195187a608f8065b2b3ee04a980380a 240 SMART SM00448 6 120 1.4E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS03220 a195187a608f8065b2b3ee04a980380a 240 SMART SM00862 157 233 1.6E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS03220 a195187a608f8065b2b3ee04a980380a 240 Gene3D G3DSA:3.40.50.2300 6 131 1.6E-41 T 23-04-2016 LT40_RS03220 a195187a608f8065b2b3ee04a980380a 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 2.9E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS03220 a195187a608f8065b2b3ee04a980380a 240 Gene3D G3DSA:1.10.10.10 133 235 1.1E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03220 a195187a608f8065b2b3ee04a980380a 240 PANTHER PTHR26402:SF528 6 239 1.4E-134 T 23-04-2016 LT40_RS03220 a195187a608f8065b2b3ee04a980380a 240 Pfam PF00072 Response regulator receiver domain 8 121 7.2E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS03220 a195187a608f8065b2b3ee04a980380a 240 SUPERFAMILY SSF46894 138 234 3.12E-22 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS18650 77c6c2c341f5df4224a770f4c16395b1 194 PANTHER PTHR11055 14 193 9.8E-67 T 23-04-2016 LT40_RS18650 77c6c2c341f5df4224a770f4c16395b1 194 Gene3D G3DSA:3.40.50.300 15 193 3.7E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18650 77c6c2c341f5df4224a770f4c16395b1 194 Pfam PF01583 Adenylylsulphate kinase 20 172 3.9E-57 T 23-04-2016 LT40_RS18650 77c6c2c341f5df4224a770f4c16395b1 194 PANTHER PTHR11055:SF1 14 193 9.8E-67 T 23-04-2016 LT40_RS18650 77c6c2c341f5df4224a770f4c16395b1 194 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 16 184 4.5E-59 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 LT40_RS18650 77c6c2c341f5df4224a770f4c16395b1 194 SUPERFAMILY SSF52540 19 186 6.7E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10195 cf3f11ef0bf22553ada0b10b9e7059e0 1250 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 1 1247 0.0 T 23-04-2016 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 LT40_RS10195 cf3f11ef0bf22553ada0b10b9e7059e0 1250 Pfam PF02514 CobN/Magnesium Chelatase 138 1232 0.0 T 23-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 LT40_RS10195 cf3f11ef0bf22553ada0b10b9e7059e0 1250 PANTHER PTHR23304:SF96 26 1249 0.0 T 23-04-2016 LT40_RS10195 cf3f11ef0bf22553ada0b10b9e7059e0 1250 PANTHER PTHR23304 26 1249 0.0 T 23-04-2016 LT40_RS14765 fce0613a234b4bdcf68a21eb2967862a 149 Gene3D G3DSA:1.10.1660.10 1 55 7.3E-27 T 23-04-2016 LT40_RS14765 fce0613a234b4bdcf68a21eb2967862a 149 SMART SM00422 1 70 8.5E-31 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS14765 fce0613a234b4bdcf68a21eb2967862a 149 SUPERFAMILY SSF46955 1 124 1.1E-35 T 23-04-2016 IPR009061 Putative DNA-binding domain LT40_RS14765 fce0613a234b4bdcf68a21eb2967862a 149 Pfam PF13411 MerR HTH family regulatory protein 1 67 2.7E-21 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS14765 fce0613a234b4bdcf68a21eb2967862a 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 8.2E-8 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS14765 fce0613a234b4bdcf68a21eb2967862a 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 8.2E-8 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS14765 fce0613a234b4bdcf68a21eb2967862a 149 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 8.2E-8 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS14765 fce0613a234b4bdcf68a21eb2967862a 149 PANTHER PTHR30204:SF18 1 129 7.2E-48 T 23-04-2016 LT40_RS14765 fce0613a234b4bdcf68a21eb2967862a 149 PANTHER PTHR30204 1 129 7.2E-48 T 23-04-2016 LT40_RS14765 fce0613a234b4bdcf68a21eb2967862a 149 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 127 3.1E-61 T 23-04-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 LT40_RS14765 fce0613a234b4bdcf68a21eb2967862a 149 Gene3D G3DSA:1.10.1660.10 56 128 5.2E-26 T 23-04-2016 LT40_RS02195 86a8eeec6a237550b94a1022cca0c596 183 Pfam PF03358 NADPH-dependent FMN reductase 7 150 2.0E-35 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 LT40_RS02195 86a8eeec6a237550b94a1022cca0c596 183 PANTHER PTHR30543:SF6 1 182 1.2E-52 T 23-04-2016 LT40_RS02195 86a8eeec6a237550b94a1022cca0c596 183 Gene3D G3DSA:3.40.50.360 3 181 4.5E-46 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS02195 86a8eeec6a237550b94a1022cca0c596 183 PANTHER PTHR30543 1 182 1.2E-52 T 23-04-2016 LT40_RS02195 86a8eeec6a237550b94a1022cca0c596 183 SUPERFAMILY SSF52218 7 163 6.13E-42 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS00120 3978c9ac6d302ce188d278a560ce92be 74 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 6 67 6.8E-35 T 23-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 LT40_RS00120 3978c9ac6d302ce188d278a560ce92be 74 Gene3D G3DSA:1.10.720.30 13 70 3.7E-33 T 23-04-2016 IPR003034 SAP domain LT40_RS00740 1fffb87cbf6c2185997c26a93661bf9d 328 SUPERFAMILY SSF52540 5 201 2.4E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00740 1fffb87cbf6c2185997c26a93661bf9d 328 PANTHER PTHR11669:SF8 8 203 6.7E-56 T 23-04-2016 LT40_RS00740 1fffb87cbf6c2185997c26a93661bf9d 328 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 199 5.5E-62 T 23-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS00740 1fffb87cbf6c2185997c26a93661bf9d 328 PANTHER PTHR11669 8 203 6.7E-56 T 23-04-2016 LT40_RS00740 1fffb87cbf6c2185997c26a93661bf9d 328 Gene3D G3DSA:3.40.50.300 5 160 3.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00740 1fffb87cbf6c2185997c26a93661bf9d 328 Pfam PF13177 DNA polymerase III, delta subunit 18 159 9.2E-46 T 23-04-2016 LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 154 216 1.2E-16 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 PRINTS PR00969 Pili chaperone signature 110 125 9.4E-34 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 PRINTS PR00969 Pili chaperone signature 86 103 9.4E-34 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 PRINTS PR00969 Pili chaperone signature 58 79 9.4E-34 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 PRINTS PR00969 Pili chaperone signature 12 21 9.4E-34 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 PRINTS PR00969 Pili chaperone signature 149 164 9.4E-34 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 SUPERFAMILY SSF49584 122 219 3.92E-19 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 SUPERFAMILY SSF49354 7 128 1.13E-40 T 23-04-2016 IPR008962 PapD-like LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 PANTHER PTHR30251 1 225 1.7E-66 T 23-04-2016 LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 11 128 5.0E-41 T 23-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 Gene3D G3DSA:2.60.40.360 11 128 8.6E-44 T 23-04-2016 IPR008962 PapD-like LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 Gene3D G3DSA:2.60.40.1070 132 217 7.2E-20 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal LT40_RS03975 a44c5d2992f58a05d4c980d76ff6f596 227 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 85 102 - T 23-04-2016 IPR018046 Pili assembly chaperone, conserved site LT40_RS03140 61dd61485647dedc95ea05887575fb16 372 PANTHER PTHR33529 2 366 2.1E-106 T 23-04-2016 LT40_RS03140 61dd61485647dedc95ea05887575fb16 372 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 353 2.6E-74 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 LT40_RS03140 61dd61485647dedc95ea05887575fb16 372 PANTHER PTHR33529:SF2 2 366 2.1E-106 T 23-04-2016 LT40_RS03140 61dd61485647dedc95ea05887575fb16 372 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 354 2.4E-117 T 23-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 LT40_RS18195 d75279509428dd4b738ea9c680d65c22 215 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 14 215 30.088 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 LT40_RS18195 d75279509428dd4b738ea9c680d65c22 215 SUPERFAMILY SSF47240 59 186 1.75E-17 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS18195 d75279509428dd4b738ea9c680d65c22 215 PANTHER PTHR11237 1 215 1.2E-117 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 LT40_RS18195 d75279509428dd4b738ea9c680d65c22 215 Gene3D G3DSA:1.20.1260.10 45 184 7.4E-13 T 23-04-2016 IPR012347 Ferritin-related LT40_RS18195 d75279509428dd4b738ea9c680d65c22 215 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 54 212 5.0E-38 T 23-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 LT40_RS18195 d75279509428dd4b738ea9c680d65c22 215 PANTHER PTHR11237:SF3 1 215 1.2E-117 T 23-04-2016 LT40_RS01090 7503d139d4fcc1169909e3dbc7de6fcb 342 SUPERFAMILY SSF55729 1 341 9.36E-117 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS01090 7503d139d4fcc1169909e3dbc7de6fcb 342 PANTHER PTHR30420:SF3 1 342 8.6E-229 T 23-04-2016 LT40_RS01090 7503d139d4fcc1169909e3dbc7de6fcb 342 Gene3D G3DSA:2.40.40.20 286 342 6.3E-25 T 23-04-2016 LT40_RS01090 7503d139d4fcc1169909e3dbc7de6fcb 342 PANTHER PTHR30420 1 342 8.6E-229 T 23-04-2016 LT40_RS01090 7503d139d4fcc1169909e3dbc7de6fcb 342 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 341 3.8E-132 T 23-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 LT40_RS01090 7503d139d4fcc1169909e3dbc7de6fcb 342 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 340 3.8E-124 T 23-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 LT40_RS01090 7503d139d4fcc1169909e3dbc7de6fcb 342 TIGRFAM TIGR03245 arg_AOST_alph: arginine/ornithine succinyltransferase, alpha subunit 3 342 1.8E-165 T 23-04-2016 IPR017651 Arginine/ornithine succinyltransferase, alpha subunit KEGG: 00330+2.3.1.109|UniPathway: UPA00185 LT40_RS07850 e430dd5680e4eea9e7d3dbaba5789c4b 325 SUPERFAMILY SSF52283 2 136 7.56E-27 T 23-04-2016 LT40_RS07850 e430dd5680e4eea9e7d3dbaba5789c4b 325 SUPERFAMILY SSF51735 104 286 1.1E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07850 e430dd5680e4eea9e7d3dbaba5789c4b 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LT40_RS07850 e430dd5680e4eea9e7d3dbaba5789c4b 325 PANTHER PTHR10996 3 309 7.3E-103 T 23-04-2016 LT40_RS07850 e430dd5680e4eea9e7d3dbaba5789c4b 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 285 1.2E-58 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LT40_RS07850 e430dd5680e4eea9e7d3dbaba5789c4b 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 311 7.2E-24 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LT40_RS07850 e430dd5680e4eea9e7d3dbaba5789c4b 325 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LT40_RS07850 e430dd5680e4eea9e7d3dbaba5789c4b 325 Gene3D G3DSA:3.40.50.720 111 286 1.0E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07850 e430dd5680e4eea9e7d3dbaba5789c4b 325 Gene3D G3DSA:3.40.50.720 4 110 3.7E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08990 ee1f6550d7aea80bbfc1c36559c8edf9 307 SUPERFAMILY SSF64383 165 301 1.14E-46 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LT40_RS08990 ee1f6550d7aea80bbfc1c36559c8edf9 307 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 5 295 8.4E-79 T 23-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 LT40_RS08990 ee1f6550d7aea80bbfc1c36559c8edf9 307 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 167 294 1.6E-47 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LT40_RS08990 ee1f6550d7aea80bbfc1c36559c8edf9 307 PANTHER PTHR38685 1 307 8.8E-73 T 23-04-2016 LT40_RS08990 ee1f6550d7aea80bbfc1c36559c8edf9 307 PANTHER PTHR38685:SF1 1 307 8.8E-73 T 23-04-2016 LT40_RS08990 ee1f6550d7aea80bbfc1c36559c8edf9 307 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 297 25.107 T 23-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 LT40_RS08990 ee1f6550d7aea80bbfc1c36559c8edf9 307 SMART SM00771 165 295 1.1E-67 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LT40_RS08990 ee1f6550d7aea80bbfc1c36559c8edf9 307 Gene3D G3DSA:3.30.1400.10 165 301 5.3E-57 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LT40_RS08990 ee1f6550d7aea80bbfc1c36559c8edf9 307 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 168 297 3.0E-68 T 23-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 LT40_RS11745 0c06f04ddc1e63d6be6115b665306c1b 374 PANTHER PTHR10953 96 230 4.7E-38 T 23-04-2016 LT40_RS11745 0c06f04ddc1e63d6be6115b665306c1b 374 SUPERFAMILY SSF69572 97 362 6.15E-47 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LT40_RS11745 0c06f04ddc1e63d6be6115b665306c1b 374 Gene3D G3DSA:3.40.50.720 97 363 1.2E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11745 0c06f04ddc1e63d6be6115b665306c1b 374 Pfam PF00899 ThiF family 122 347 1.8E-35 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SUPERFAMILY SSF55874 550 721 4.19E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Pfam PF05227 CHASE3 domain 46 178 6.1E-38 T 23-04-2016 IPR007891 CHASE3 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SUPERFAMILY SSF55781 224 388 1.35E-22 T 23-04-2016 IPR029016 GAF domain-like LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 698 2.7E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 673 2.7E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 659 2.7E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 PRINTS PR00344 Bacterial sensor protein C-terminal signature 704 717 2.7E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Gene3D G3DSA:3.40.50.2300 1036 1157 5.7E-41 T 23-04-2016 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SMART SM00388 493 561 2.2E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SUPERFAMILY SSF52172 891 1017 6.4E-18 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Pfam PF13185 GAF domain 252 388 4.2E-14 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Gene3D G3DSA:3.30.450.40 242 400 5.4E-18 T 23-04-2016 IPR029016 GAF domain-like LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SUPERFAMILY SSF52172 767 883 8.68E-26 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SUPERFAMILY SSF52172 1034 1156 2.56E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Pfam PF00512 His Kinase A (phospho-acceptor) domain 494 561 1.7E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Gene3D G3DSA:3.30.565.10 562 719 1.8E-42 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Gene3D G3DSA:3.40.50.2300 767 884 4.7E-23 T 23-04-2016 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Gene3D G3DSA:1.10.287.130 484 557 1.4E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SMART SM00065 253 397 6.8E-10 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 609 718 2.4E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SMART SM00387 608 720 1.5E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Gene3D G3DSA:3.40.50.2300 891 1015 5.6E-18 T 23-04-2016 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SMART SM00448 891 1005 2.8E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SMART SM00448 1037 1151 3.2E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SMART SM00448 769 879 6.2E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 SUPERFAMILY SSF47384 479 562 2.35E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Pfam PF00072 Response regulator receiver domain 893 986 1.2E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Pfam PF00072 Response regulator receiver domain 771 877 4.7E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 Pfam PF00072 Response regulator receiver domain 1039 1151 1.4E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 PANTHER PTHR24423 472 753 1.8E-139 T 23-04-2016 LT40_RS09455 203abe72b192d61156a8b63dc5cc7303 1161 PANTHER PTHR24423 1036 1161 1.8E-139 T 23-04-2016 LT40_RS12425 39af51a9b282f5742418e58f5a364e90 705 Pfam PF00593 TonB dependent receptor 436 702 2.6E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS12425 39af51a9b282f5742418e58f5a364e90 705 Gene3D G3DSA:2.170.130.10 18 159 2.0E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS12425 39af51a9b282f5742418e58f5a364e90 705 PANTHER PTHR32552 5 468 2.9E-20 T 23-04-2016 LT40_RS12425 39af51a9b282f5742418e58f5a364e90 705 PANTHER PTHR32552 487 704 2.9E-20 T 23-04-2016 LT40_RS12425 39af51a9b282f5742418e58f5a364e90 705 SUPERFAMILY SSF56935 18 703 5.8E-82 T 23-04-2016 LT40_RS12425 39af51a9b282f5742418e58f5a364e90 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 156 2.0E-8 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS12425 39af51a9b282f5742418e58f5a364e90 705 Gene3D G3DSA:2.40.170.20 160 703 8.4E-65 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS09760 4fe822e1f8a9408da54be47aca787b9b 454 Pfam PF00860 Permease family 25 415 6.4E-95 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS09760 4fe822e1f8a9408da54be47aca787b9b 454 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 25 443 1.7E-121 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LT40_RS09760 4fe822e1f8a9408da54be47aca787b9b 454 TIGRFAM TIGR03173 pbuX: xanthine permease 28 447 8.8E-128 T 23-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 LT40_RS09760 4fe822e1f8a9408da54be47aca787b9b 454 PANTHER PTHR11119 10 447 4.7E-239 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS09760 4fe822e1f8a9408da54be47aca787b9b 454 PANTHER PTHR11119:SF44 10 447 4.7E-239 T 23-04-2016 LT40_RS09760 4fe822e1f8a9408da54be47aca787b9b 454 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.0E-44 T 23-04-2016 LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 Gene3D G3DSA:3.40.50.300 15 166 1.2E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 SUPERFAMILY SSF52540 29 222 1.58E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 SUPERFAMILY SSF48019 243 365 1.53E-32 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 PANTHER PTHR11669:SF0 1 370 7.6E-179 T 23-04-2016 LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 Gene3D G3DSA:1.20.272.10 243 360 4.2E-45 T 23-04-2016 LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 5.5E-131 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 SMART SM00382 37 179 5.1E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 Gene3D G3DSA:1.10.8.60 167 242 1.2E-31 T 23-04-2016 LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 358 4.1E-31 T 23-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 PANTHER PTHR11669 1 370 7.6E-179 T 23-04-2016 LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.4E-5 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 LT40_RS09010 b7c8935f6ef18077bca81fb3ae3e5ef0 387 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.4E-5 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 Gene3D G3DSA:2.170.130.10 104 258 1.8E-25 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 PANTHER PTHR32552:SF14 138 790 2.6E-171 T 23-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 Pfam PF00593 TonB dependent receptor 550 788 2.2E-27 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 SMART SM00965 49 100 2.6E-11 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 148 790 5.0E-107 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 SUPERFAMILY SSF56935 141 790 1.29E-107 T 23-04-2016 LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 PANTHER PTHR32552:SF14 108 114 2.6E-171 T 23-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 Gene3D G3DSA:2.40.170.20 263 790 1.2E-102 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 PANTHER PTHR32552 108 114 2.6E-171 T 23-04-2016 LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 PANTHER PTHR32552 138 790 2.6E-171 T 23-04-2016 LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 773 790 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site LT40_RS05480 c5cbab249479bb8f4c8e0f8ffd9b99cc 790 Pfam PF07715 TonB-dependent Receptor Plug Domain 147 238 2.6E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS09580 4ba8484aa94522d77fdcdc15d740eddd 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 182 5.7E-26 T 23-04-2016 IPR023214 HAD-like domain LT40_RS09580 4ba8484aa94522d77fdcdc15d740eddd 219 PANTHER PTHR18901 2 211 6.2E-56 T 23-04-2016 LT40_RS09580 4ba8484aa94522d77fdcdc15d740eddd 219 Gene3D G3DSA:1.10.150.240 16 74 8.4E-6 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LT40_RS09580 4ba8484aa94522d77fdcdc15d740eddd 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 4 181 4.3E-11 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS09580 4ba8484aa94522d77fdcdc15d740eddd 219 SUPERFAMILY SSF56784 1 206 8.27E-46 T 23-04-2016 IPR023214 HAD-like domain LT40_RS09580 4ba8484aa94522d77fdcdc15d740eddd 219 PANTHER PTHR18901:SF2 2 211 6.2E-56 T 23-04-2016 LT40_RS09580 4ba8484aa94522d77fdcdc15d740eddd 219 Gene3D G3DSA:3.40.50.1000 75 207 6.0E-39 T 23-04-2016 IPR023214 HAD-like domain LT40_RS10530 501b7375cfa294bf833b5ba32b475c27 292 Pfam PF00753 Metallo-beta-lactamase superfamily 41 227 1.9E-18 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS10530 501b7375cfa294bf833b5ba32b475c27 292 SUPERFAMILY SSF56281 26 251 9.6E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS10530 501b7375cfa294bf833b5ba32b475c27 292 SMART SM00849 42 227 2.1E-24 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS10530 501b7375cfa294bf833b5ba32b475c27 292 Gene3D G3DSA:3.60.15.10 29 255 1.7E-38 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS10530 501b7375cfa294bf833b5ba32b475c27 292 PANTHER PTHR11935 1 292 1.0E-89 T 23-04-2016 LT40_RS10530 501b7375cfa294bf833b5ba32b475c27 292 PANTHER PTHR11935:SF5 1 292 1.0E-89 T 23-04-2016 LT40_RS11315 d0693c9300f2e50f1ff85be525fdc052 146 Gene3D G3DSA:3.90.79.10 1 142 1.5E-29 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS11315 d0693c9300f2e50f1ff85be525fdc052 146 PANTHER PTHR22769:SF14 3 136 1.4E-26 T 23-04-2016 LT40_RS11315 d0693c9300f2e50f1ff85be525fdc052 146 SUPERFAMILY SSF55811 3 135 3.38E-26 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS11315 d0693c9300f2e50f1ff85be525fdc052 146 Pfam PF00293 NUDIX domain 7 117 4.4E-14 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LT40_RS11315 d0693c9300f2e50f1ff85be525fdc052 146 PANTHER PTHR22769 3 136 1.4E-26 T 23-04-2016 LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 1.9E-208 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 Gene3D G3DSA:3.40.50.300 68 256 5.3E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 Gene3D G3DSA:3.40.50.300 296 312 5.3E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 SUPERFAMILY SSF52540 66 406 1.4E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 417 53.831 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 SMART SM00994 14 53 2.5E-24 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 9.6E-15 T 23-04-2016 IPR019489 Clp ATPase, C-terminal LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 SMART SM00382 114 335 1.9E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 Gene3D G3DSA:1.10.8.60 318 417 4.2E-38 T 23-04-2016 LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 SUPERFAMILY SSF57716 15 50 1.15E-11 T 23-04-2016 LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 Pfam PF06689 ClpX C4-type zinc finger 15 52 1.0E-20 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 PANTHER PTHR11262 6 416 3.7E-250 T 23-04-2016 LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 Pfam PF07724 AAA domain (Cdc48 subfamily) 115 312 4.0E-50 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS02105 938f9f21ad754bacab2115514e86170c 428 SMART SM01086 319 414 3.7E-33 T 23-04-2016 IPR019489 Clp ATPase, C-terminal LT40_RS14870 05567efa07c3c4d37f73dc534a1047cd 256 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 48.607 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 LT40_RS14870 05567efa07c3c4d37f73dc534a1047cd 256 Gene3D G3DSA:3.20.20.70 5 256 4.1E-109 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS14870 05567efa07c3c4d37f73dc534a1047cd 256 SUPERFAMILY SSF51366 3 256 6.67E-84 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LT40_RS14870 05567efa07c3c4d37f73dc534a1047cd 256 Pfam PF00977 Histidine biosynthesis protein 6 240 2.4E-91 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 LT40_RS14870 05567efa07c3c4d37f73dc534a1047cd 256 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 4.5E-113 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 LT40_RS14870 05567efa07c3c4d37f73dc534a1047cd 256 PANTHER PTHR21235 3 256 6.4E-124 T 23-04-2016 LT40_RS14870 05567efa07c3c4d37f73dc534a1047cd 256 PANTHER PTHR21235:SF2 3 256 6.4E-124 T 23-04-2016 LT40_RS05200 2226301aec4d7d1cba10157a8432cd4f 65 Hamap MF_00167 Carbon storage regulator [csrA]. 1 65 18.977 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS05200 2226301aec4d7d1cba10157a8432cd4f 65 PANTHER PTHR34984 1 53 3.8E-23 T 23-04-2016 LT40_RS05200 2226301aec4d7d1cba10157a8432cd4f 65 Pfam PF02599 Global regulator protein family 1 53 3.5E-24 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS05200 2226301aec4d7d1cba10157a8432cd4f 65 PANTHER PTHR34984:SF1 1 53 3.8E-23 T 23-04-2016 LT40_RS05200 2226301aec4d7d1cba10157a8432cd4f 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 1.4E-24 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS05200 2226301aec4d7d1cba10157a8432cd4f 65 SUPERFAMILY SSF117130 1 54 1.57E-19 T 23-04-2016 LT40_RS05200 2226301aec4d7d1cba10157a8432cd4f 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 2.0E-13 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS11690 03ee1e31c8690828226661fecfbfc14a 268 SUPERFAMILY SSF55781 76 255 1.11E-28 T 23-04-2016 IPR029016 GAF domain-like LT40_RS11690 03ee1e31c8690828226661fecfbfc14a 268 Pfam PF09339 IclR helix-turn-helix domain 7 57 7.8E-12 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS11690 03ee1e31c8690828226661fecfbfc14a 268 Gene3D G3DSA:3.30.450.40 76 254 4.1E-34 T 23-04-2016 IPR029016 GAF domain-like LT40_RS11690 03ee1e31c8690828226661fecfbfc14a 268 Gene3D G3DSA:1.10.10.10 7 75 6.3E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11690 03ee1e31c8690828226661fecfbfc14a 268 SMART SM00346 5 95 1.6E-14 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS11690 03ee1e31c8690828226661fecfbfc14a 268 Pfam PF01614 Bacterial transcriptional regulator 131 253 6.5E-18 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal LT40_RS11690 03ee1e31c8690828226661fecfbfc14a 268 PANTHER PTHR30136:SF13 7 265 4.7E-52 T 23-04-2016 LT40_RS11690 03ee1e31c8690828226661fecfbfc14a 268 SUPERFAMILY SSF46785 7 78 2.27E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11690 03ee1e31c8690828226661fecfbfc14a 268 PANTHER PTHR30136 7 265 4.7E-52 T 23-04-2016 LT40_RS14735 e2c7a4fbaba0d9b1abe6ab865c35fe62 613 SUPERFAMILY SSF143975 3 418 2.62E-137 T 23-04-2016 LT40_RS14735 e2c7a4fbaba0d9b1abe6ab865c35fe62 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 5.6E-251 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS14735 e2c7a4fbaba0d9b1abe6ab865c35fe62 613 PANTHER PTHR21000 1 369 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS14735 e2c7a4fbaba0d9b1abe6ab865c35fe62 613 PANTHER PTHR21000 404 612 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS14735 e2c7a4fbaba0d9b1abe6ab865c35fe62 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS14735 e2c7a4fbaba0d9b1abe6ab865c35fe62 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS14735 e2c7a4fbaba0d9b1abe6ab865c35fe62 613 SUPERFAMILY SSF52016 419 606 2.04E-59 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS14735 e2c7a4fbaba0d9b1abe6ab865c35fe62 613 Pfam PF00920 Dehydratase family 34 603 1.3E-217 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS14735 e2c7a4fbaba0d9b1abe6ab865c35fe62 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.639 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS14735 e2c7a4fbaba0d9b1abe6ab865c35fe62 613 PANTHER PTHR21000:SF11 1 369 0.0 T 23-04-2016 LT40_RS14735 e2c7a4fbaba0d9b1abe6ab865c35fe62 613 PANTHER PTHR21000:SF11 404 612 0.0 T 23-04-2016 LT40_RS15035 309e61e915630d6323e359289654b82d 147 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 77 2.5E-14 T 23-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS15035 309e61e915630d6323e359289654b82d 147 SUPERFAMILY SSF69118 5 145 1.77E-44 T 23-04-2016 IPR029032 AhpD-like LT40_RS15035 309e61e915630d6323e359289654b82d 147 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 94 2.0E-16 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS15035 309e61e915630d6323e359289654b82d 147 Gene3D G3DSA:1.20.1290.10 4 145 1.1E-48 T 23-04-2016 IPR029032 AhpD-like LT40_RS11225 90907775b0445065c0736047bc0b8319 261 Pfam PF01925 Sulfite exporter TauE/SafE 9 259 4.9E-47 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LT40_RS11225 90907775b0445065c0736047bc0b8319 261 PANTHER PTHR30269:SF2 1 261 1.2E-66 T 23-04-2016 LT40_RS11225 90907775b0445065c0736047bc0b8319 261 PANTHER PTHR30269 1 261 1.2E-66 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LT40_RS01615 12d4ffe8214f4b82919747097d448919 241 SMART SM00382 29 212 3.9E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS01615 12d4ffe8214f4b82919747097d448919 241 PANTHER PTHR24220:SF366 6 237 5.1E-93 T 23-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD LT40_RS01615 12d4ffe8214f4b82919747097d448919 241 SUPERFAMILY SSF52540 4 234 1.74E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01615 12d4ffe8214f4b82919747097d448919 241 Gene3D G3DSA:3.40.50.300 3 237 5.8E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01615 12d4ffe8214f4b82919747097d448919 241 Pfam PF00005 ABC transporter 21 164 9.5E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS01615 12d4ffe8214f4b82919747097d448919 241 PANTHER PTHR24220 6 237 5.1E-93 T 23-04-2016 LT40_RS01615 12d4ffe8214f4b82919747097d448919 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 234 9.3E-7 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LT40_RS16375 04b256d10a393d6b0e0137660ec344b1 252 PANTHER PTHR10010 7 247 1.4E-89 T 23-04-2016 LT40_RS16375 04b256d10a393d6b0e0137660ec344b1 252 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 224 1.3E-79 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LT40_RS16375 04b256d10a393d6b0e0137660ec344b1 252 PIRSF PIRSF003107 8 229 8.1E-79 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LT40_RS16375 04b256d10a393d6b0e0137660ec344b1 252 Gene3D G3DSA:1.20.58.220 10 120 3.4E-37 T 23-04-2016 LT40_RS16375 04b256d10a393d6b0e0137660ec344b1 252 Pfam PF01895 PhoU domain 27 113 7.3E-23 T 23-04-2016 IPR026022 PhoU domain LT40_RS16375 04b256d10a393d6b0e0137660ec344b1 252 Pfam PF01895 PhoU domain 131 214 6.8E-18 T 23-04-2016 IPR026022 PhoU domain LT40_RS16375 04b256d10a393d6b0e0137660ec344b1 252 Gene3D G3DSA:1.20.58.220 129 242 2.4E-35 T 23-04-2016 LT40_RS16375 04b256d10a393d6b0e0137660ec344b1 252 PANTHER PTHR10010:SF14 7 247 1.4E-89 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LT40_RS16375 04b256d10a393d6b0e0137660ec344b1 252 SUPERFAMILY SSF109755 13 235 2.72E-73 T 23-04-2016 LT40_RS13640 e5d510a8def521b114b8911550471438 224 Pfam PF01730 UreF 35 181 1.8E-35 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 LT40_RS13640 e5d510a8def521b114b8911550471438 224 PIRSF PIRSF009467 1 224 1.1E-58 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 LT40_RS13640 e5d510a8def521b114b8911550471438 224 PANTHER PTHR33620 1 224 3.8E-34 T 23-04-2016 LT40_RS13640 e5d510a8def521b114b8911550471438 224 Hamap MF_01385 Urease accessory protein UreF [ureF]. 3 224 29.201 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 SMART SM00327 4207 4405 4.4E-6 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4501 4519 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 4510 4528 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 PRINTS PR00313 NodO calcium binding signature 4496 4504 7.2E-9 T 23-04-2016 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 PRINTS PR00313 NodO calcium binding signature 4411 4422 7.2E-9 T 23-04-2016 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 PRINTS PR00313 NodO calcium binding signature 4514 4522 7.2E-9 T 23-04-2016 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 PRINTS PR00313 NodO calcium binding signature 4523 4532 7.2E-9 T 23-04-2016 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 Pfam PF00092 von Willebrand factor type A domain 4209 4380 2.8E-9 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 SUPERFAMILY SSF53300 4172 4380 2.83E-17 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 Gene3D G3DSA:3.40.50.410 4209 4396 5.1E-13 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 Pfam PF03160 Calx-beta domain 3695 3755 0.051 T 23-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 Pfam PF03160 Calx-beta domain 1110 1189 0.016 T 23-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 Pfam PF03160 Calx-beta domain 2074 2163 2.0E-5 T 23-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 Pfam PF03160 Calx-beta domain 2759 2831 6.7E-4 T 23-04-2016 IPR003644 Na-Ca exchanger/integrin-beta4 GO:0007154|GO:0016021 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 SUPERFAMILY SSF141072 3682 3782 3.66E-11 T 23-04-2016 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 SUPERFAMILY SSF51120 4477 4565 8.11E-21 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 SUPERFAMILY SSF51120 4407 4436 8.11E-21 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 SUPERFAMILY SSF141072 2752 2861 2.75E-14 T 23-04-2016 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 SUPERFAMILY SSF141072 2084 2193 1.83E-16 T 23-04-2016 LT40_RS15490 9448496732977d95c8d626acd353afbe 4633 SUPERFAMILY SSF141072 1110 1219 3.14E-15 T 23-04-2016 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 Pfam PF12833 Helix-turn-helix domain 246 325 5.5E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 SMART SM00342 240 323 1.5E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 SUPERFAMILY SSF52317 1 209 8.91E-42 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 SUPERFAMILY SSF46689 224 273 9.56E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 Gene3D G3DSA:1.10.10.60 277 325 2.1E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 PANTHER PTHR11019:SF58 75 138 1.3E-71 T 23-04-2016 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 PANTHER PTHR11019:SF58 159 326 1.3E-71 T 23-04-2016 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 Pfam PF01965 DJ-1/PfpI family 4 184 1.1E-20 T 23-04-2016 IPR002818 DJ-1/PfpI LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 Gene3D G3DSA:1.10.10.60 232 276 7.9E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 PANTHER PTHR11019 75 138 1.3E-71 T 23-04-2016 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 PANTHER PTHR11019 159 326 1.3E-71 T 23-04-2016 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 SUPERFAMILY SSF46689 276 326 7.17E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10280 4a2d3076a9ed3b9f9bb38a7d239ad90f 328 Gene3D G3DSA:3.40.50.880 4 231 5.1E-52 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 Pfam PF00005 ABC transporter 21 163 3.9E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 SUPERFAMILY SSF50331 238 365 2.43E-26 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 Gene3D G3DSA:2.40.50.100 351 365 4.6E-9 T 23-04-2016 LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 Gene3D G3DSA:2.40.50.100 241 288 4.6E-9 T 23-04-2016 LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 Gene3D G3DSA:2.40.50.140 289 350 8.9E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 SUPERFAMILY SSF52540 4 245 7.39E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 Gene3D G3DSA:3.40.50.300 3 236 2.0E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 SMART SM00382 30 221 4.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 PANTHER PTHR24220 5 293 5.2E-191 T 23-04-2016 LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 Pfam PF08402 TOBE domain 284 357 8.5E-9 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LT40_RS03245 c7661880d8c9003eaa63a42851d52d24 386 PANTHER PTHR24220:SF446 5 293 5.2E-191 T 23-04-2016 LT40_RS07965 e857ee386f161137467ed13a95cbc2f6 158 PANTHER PTHR33570:SF5 1 154 2.6E-52 T 23-04-2016 LT40_RS07965 e857ee386f161137467ed13a95cbc2f6 158 Pfam PF07883 Cupin domain 66 126 3.4E-11 T 23-04-2016 IPR013096 Cupin 2, conserved barrel LT40_RS07965 e857ee386f161137467ed13a95cbc2f6 158 PANTHER PTHR33570 1 154 2.6E-52 T 23-04-2016 LT40_RS07965 e857ee386f161137467ed13a95cbc2f6 158 SUPERFAMILY SSF51182 33 154 1.1E-31 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS07965 e857ee386f161137467ed13a95cbc2f6 158 Gene3D G3DSA:2.60.120.10 33 154 2.5E-33 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS06050 6194283b961c3f6a8695e12c61d94bd8 585 SUPERFAMILY SSF90123 15 322 2.62E-71 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS06050 6194283b961c3f6a8695e12c61d94bd8 585 PANTHER PTHR24221 9 584 7.0E-229 T 23-04-2016 LT40_RS06050 6194283b961c3f6a8695e12c61d94bd8 585 Gene3D G3DSA:3.40.50.300 344 576 4.6E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06050 6194283b961c3f6a8695e12c61d94bd8 585 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 8 583 7.0E-272 T 23-04-2016 IPR011918 ABC transporter, ATP-binding/permease protein LT40_RS06050 6194283b961c3f6a8695e12c61d94bd8 585 Pfam PF00005 ABC transporter 364 512 2.8E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS06050 6194283b961c3f6a8695e12c61d94bd8 585 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS06050 6194283b961c3f6a8695e12c61d94bd8 585 SMART SM00382 372 558 3.1E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS06050 6194283b961c3f6a8695e12c61d94bd8 585 Pfam PF00664 ABC transporter transmembrane region 29 294 9.2E-50 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS06050 6194283b961c3f6a8695e12c61d94bd8 585 SUPERFAMILY SSF52540 339 583 2.3E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06050 6194283b961c3f6a8695e12c61d94bd8 585 Gene3D G3DSA:1.20.1560.10 16 329 4.5E-74 T 23-04-2016 LT40_RS02960 988bf5081f6c52306118bb8ba69a5305 312 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 12 310 7.1E-23 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LT40_RS02960 988bf5081f6c52306118bb8ba69a5305 312 PANTHER PTHR10996 1 310 8.6E-101 T 23-04-2016 LT40_RS02960 988bf5081f6c52306118bb8ba69a5305 312 Gene3D G3DSA:3.40.50.720 118 281 6.1E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02960 988bf5081f6c52306118bb8ba69a5305 312 SUPERFAMILY SSF52283 1 133 2.46E-31 T 23-04-2016 LT40_RS02960 988bf5081f6c52306118bb8ba69a5305 312 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 172 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LT40_RS02960 988bf5081f6c52306118bb8ba69a5305 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 279 2.0E-46 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LT40_RS02960 988bf5081f6c52306118bb8ba69a5305 312 SUPERFAMILY SSF51735 100 280 1.51E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02960 988bf5081f6c52306118bb8ba69a5305 312 Gene3D G3DSA:3.40.50.720 2 117 1.0E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07470 a064f4aba2d4847a1e4e75eeaf5d7fae 134 PANTHER PTHR37831 2 134 1.5E-49 T 23-04-2016 LT40_RS07470 a064f4aba2d4847a1e4e75eeaf5d7fae 134 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 134 29.847 T 23-04-2016 IPR023064 D-ribose pyranase GO:0016872 UniPathway: UPA00916 LT40_RS07470 a064f4aba2d4847a1e4e75eeaf5d7fae 134 Pfam PF05025 RbsD / FucU transport protein family 2 133 8.0E-41 T 23-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 LT40_RS07470 a064f4aba2d4847a1e4e75eeaf5d7fae 134 SUPERFAMILY SSF102546 2 134 1.96E-39 T 23-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 LT40_RS07470 a064f4aba2d4847a1e4e75eeaf5d7fae 134 PANTHER PTHR37831:SF1 2 134 1.5E-49 T 23-04-2016 LT40_RS07470 a064f4aba2d4847a1e4e75eeaf5d7fae 134 Gene3D G3DSA:3.40.1650.10 2 134 3.0E-30 T 23-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 SUPERFAMILY SSF51735 1 113 2.28E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 427 1.0E-55 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 Pfam PF10414 Sirohaem synthase dimerisation region 151 205 2.6E-21 T 23-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 SUPERFAMILY SSF75615 114 208 4.32E-28 T 23-04-2016 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 1.5E-78 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 Pfam PF14824 Sirohaem biosynthesis protein central 119 144 2.1E-7 T 23-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 SUPERFAMILY SSF53790 213 459 1.44E-84 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 3.1E-95 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 Gene3D G3DSA:3.30.950.10 332 460 1.9E-50 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 Pfam PF13241 Putative NAD(P)-binding 6 115 4.3E-28 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 Gene3D G3DSA:3.40.1010.10 215 331 5.5E-49 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 Gene3D G3DSA:1.10.8.210 151 209 2.2E-22 T 23-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 PANTHER PTHR21091:SF16 165 454 2.4E-87 T 23-04-2016 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 PIRSF PIRSF036426 1 463 3.1E-206 T 23-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 Hamap MF_01646 Siroheme synthase [cysG]. 1 460 53.855 T 23-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 Gene3D G3DSA:3.40.50.720 1 113 5.0E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 Gene3D G3DSA:3.30.160.110 114 148 4.0E-19 T 23-04-2016 LT40_RS11250 501a05fcbb03c3bf8ce3aed42a49dfc6 463 PANTHER PTHR21091 165 454 2.4E-87 T 23-04-2016 LT40_RS16850 e7dcdd2b0bd0eae6eaab78ee3994ef5b 215 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 106 2.0E-31 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS16850 e7dcdd2b0bd0eae6eaab78ee3994ef5b 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 211 1.7E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16850 e7dcdd2b0bd0eae6eaab78ee3994ef5b 215 SUPERFAMILY SSF161098 12 197 4.32E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16850 e7dcdd2b0bd0eae6eaab78ee3994ef5b 215 PANTHER PTHR30614 5 215 4.6E-83 T 23-04-2016 LT40_RS16850 e7dcdd2b0bd0eae6eaab78ee3994ef5b 215 PANTHER PTHR30614:SF8 5 215 4.6E-83 T 23-04-2016 LT40_RS16850 e7dcdd2b0bd0eae6eaab78ee3994ef5b 215 Gene3D G3DSA:1.10.3720.10 10 212 3.2E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15345 7d61254ca837e39751362bbdbd2f0e0a 329 Pfam PF12857 TOBE-like domain 266 321 7.9E-11 T 23-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 LT40_RS15345 7d61254ca837e39751362bbdbd2f0e0a 329 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 1.3E-119 T 23-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 LT40_RS15345 7d61254ca837e39751362bbdbd2f0e0a 329 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS15345 7d61254ca837e39751362bbdbd2f0e0a 329 Pfam PF00005 ABC transporter 18 164 8.7E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS15345 7d61254ca837e39751362bbdbd2f0e0a 329 SUPERFAMILY SSF52540 3 243 1.13E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15345 7d61254ca837e39751362bbdbd2f0e0a 329 PANTHER PTHR24220 4 276 1.3E-137 T 23-04-2016 LT40_RS15345 7d61254ca837e39751362bbdbd2f0e0a 329 Gene3D G3DSA:3.40.50.300 2 237 1.7E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15345 7d61254ca837e39751362bbdbd2f0e0a 329 SMART SM00382 27 214 1.2E-20 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS15345 7d61254ca837e39751362bbdbd2f0e0a 329 PANTHER PTHR24220:SF123 4 276 1.3E-137 T 23-04-2016 LT40_RS15345 7d61254ca837e39751362bbdbd2f0e0a 329 SUPERFAMILY SSF50331 235 320 1.25E-7 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 Pfam PF01578 Cytochrome C assembly protein 94 301 1.4E-53 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PANTHER PTHR30009:SF0 472 657 0.0 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PANTHER PTHR30009:SF0 6 423 0.0 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PANTHER PTHR30009 472 657 0.0 T 23-04-2016 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PANTHER PTHR30009 6 423 0.0 T 23-04-2016 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 195 210 1.6E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 634 647 1.6E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 319 334 1.6E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 357 374 1.6E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 400 419 1.6E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 9 33 1.6E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 118 141 1.6E-63 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 216 242 1.4E-97 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 250 270 1.4E-97 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 280 300 1.4E-97 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 137 154 1.4E-97 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 316 335 1.4E-97 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 300 316 1.4E-97 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 165 187 1.4E-97 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 85 111 1.4E-97 T 23-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 58 644 1.7E-229 T 23-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02600 5cbbe063bf53063fb1c30110853eabdb 661 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 321 641 6.8E-123 T 23-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal LT40_RS16535 1d703b06249e4d4c5db0e64f8d35797a 402 PANTHER PTHR14359 2 402 2.5E-185 T 23-04-2016 LT40_RS16535 1d703b06249e4d4c5db0e64f8d35797a 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 395 2.7E-139 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 LT40_RS16535 1d703b06249e4d4c5db0e64f8d35797a 402 Gene3D G3DSA:3.40.50.10300 188 400 2.0E-85 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 LT40_RS16535 1d703b06249e4d4c5db0e64f8d35797a 402 SUPERFAMILY SSF52507 1 179 1.83E-59 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 LT40_RS16535 1d703b06249e4d4c5db0e64f8d35797a 402 Gene3D G3DSA:3.40.50.1950 2 187 1.2E-63 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 LT40_RS16535 1d703b06249e4d4c5db0e64f8d35797a 402 SUPERFAMILY SSF102645 186 400 3.14E-74 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 LT40_RS16535 1d703b06249e4d4c5db0e64f8d35797a 402 PANTHER PTHR14359:SF20 2 402 2.5E-185 T 23-04-2016 LT40_RS16535 1d703b06249e4d4c5db0e64f8d35797a 402 Pfam PF02441 Flavoprotein 7 135 9.9E-32 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 LT40_RS16535 1d703b06249e4d4c5db0e64f8d35797a 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 369 1.9E-69 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 LT40_RS19145 0fb9084127b4db924249aa41ff41d229 268 SUPERFAMILY SSF160920 15 261 4.84E-113 T 23-04-2016 LT40_RS19145 0fb9084127b4db924249aa41ff41d229 268 Pfam PF07286 Protein of unknown function (DUF1445) 118 260 2.2E-67 T 23-04-2016 IPR009906 Protein of unknown function DUF1445 LT40_RS19145 0fb9084127b4db924249aa41ff41d229 268 Hamap MF_01830 UPF0317 protein . 14 268 52.724 T 23-04-2016 IPR016938 Uncharacterised protein family UPF0317 LT40_RS19145 0fb9084127b4db924249aa41ff41d229 268 PANTHER PTHR32022 1 266 4.0E-133 T 23-04-2016 LT40_RS19145 0fb9084127b4db924249aa41ff41d229 268 Gene3D G3DSA:3.40.1640.10 7 170 7.9E-65 T 23-04-2016 LT40_RS19145 0fb9084127b4db924249aa41ff41d229 268 PIRSF PIRSF029755 2 268 3.8E-120 T 23-04-2016 IPR016938 Uncharacterised protein family UPF0317 LT40_RS08410 cbf9fcad228c5c4110f2d9ff1b516c49 343 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 1 339 52.784 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 LT40_RS08410 cbf9fcad228c5c4110f2d9ff1b516c49 343 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 329 4.7E-136 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08410 cbf9fcad228c5c4110f2d9ff1b516c49 343 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 335 6.2E-145 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 LT40_RS08410 cbf9fcad228c5c4110f2d9ff1b516c49 343 Gene3D G3DSA:3.90.25.10 287 337 1.2E-46 T 23-04-2016 LT40_RS08410 cbf9fcad228c5c4110f2d9ff1b516c49 343 Gene3D G3DSA:3.90.25.10 186 240 1.2E-46 T 23-04-2016 LT40_RS08410 cbf9fcad228c5c4110f2d9ff1b516c49 343 SUPERFAMILY SSF51735 1 334 1.35E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08410 cbf9fcad228c5c4110f2d9ff1b516c49 343 PANTHER PTHR10366:SF32 2 275 2.8E-188 T 23-04-2016 LT40_RS08410 cbf9fcad228c5c4110f2d9ff1b516c49 343 PANTHER PTHR10366:SF32 293 338 2.8E-188 T 23-04-2016 LT40_RS08410 cbf9fcad228c5c4110f2d9ff1b516c49 343 Gene3D G3DSA:3.40.50.720 1 183 7.5E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08410 cbf9fcad228c5c4110f2d9ff1b516c49 343 PANTHER PTHR10366 2 275 2.8E-188 T 23-04-2016 LT40_RS08410 cbf9fcad228c5c4110f2d9ff1b516c49 343 PANTHER PTHR10366 293 338 2.8E-188 T 23-04-2016 LT40_RS11090 35e103e42b1cc8fc36467644d2cd5749 675 PANTHER PTHR10357 25 157 2.6E-251 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11090 35e103e42b1cc8fc36467644d2cd5749 675 PANTHER PTHR10357 187 673 2.6E-251 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11090 35e103e42b1cc8fc36467644d2cd5749 675 SMART SM00642 224 569 3.6E-5 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11090 35e103e42b1cc8fc36467644d2cd5749 675 Pfam PF00128 Alpha amylase, catalytic domain 238 343 2.6E-6 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11090 35e103e42b1cc8fc36467644d2cd5749 675 Pfam PF11896 Domain of unknown function (DUF3416) 33 214 3.1E-52 T 23-04-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 LT40_RS11090 35e103e42b1cc8fc36467644d2cd5749 675 SUPERFAMILY SSF51445 209 576 5.54E-87 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS11090 35e103e42b1cc8fc36467644d2cd5749 675 PANTHER PTHR10357:SF137 25 157 2.6E-251 T 23-04-2016 LT40_RS11090 35e103e42b1cc8fc36467644d2cd5749 675 PANTHER PTHR10357:SF137 187 673 2.6E-251 T 23-04-2016 LT40_RS11090 35e103e42b1cc8fc36467644d2cd5749 675 Gene3D G3DSA:2.60.40.1180 574 652 4.6E-4 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta LT40_RS11090 35e103e42b1cc8fc36467644d2cd5749 675 Gene3D G3DSA:3.20.20.80 213 573 1.0E-70 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11090 35e103e42b1cc8fc36467644d2cd5749 675 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 30 672 46.19 T 23-04-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 LT40_RS09185 9d52e9df02e2f553814bdbbbcea77672 472 PANTHER PTHR30026 37 460 4.4E-58 T 23-04-2016 LT40_RS09185 9d52e9df02e2f553814bdbbbcea77672 472 PANTHER PTHR30026:SF3 37 460 4.4E-58 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LT40_RS09185 9d52e9df02e2f553814bdbbbcea77672 472 SUPERFAMILY SSF56954 43 454 9.29E-71 T 23-04-2016 LT40_RS09185 9d52e9df02e2f553814bdbbbcea77672 472 Pfam PF02321 Outer membrane efflux protein 252 438 5.9E-28 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS09185 9d52e9df02e2f553814bdbbbcea77672 472 Pfam PF02321 Outer membrane efflux protein 48 229 1.8E-10 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS09185 9d52e9df02e2f553814bdbbbcea77672 472 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 42 453 1.1E-68 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LT40_RS09185 9d52e9df02e2f553814bdbbbcea77672 472 Gene3D G3DSA:1.20.1600.10 32 443 1.1E-61 T 23-04-2016 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 SUPERFAMILY SSF53807 26 305 9.32E-67 T 23-04-2016 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PRINTS PR00691 Adhesin B signature 34 55 3.9E-11 T 23-04-2016 IPR006129 Adhesin B GO:0007155 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PRINTS PR00691 Adhesin B signature 59 77 3.9E-11 T 23-04-2016 IPR006129 Adhesin B GO:0007155 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PRINTS PR00691 Adhesin B signature 194 211 3.9E-11 T 23-04-2016 IPR006129 Adhesin B GO:0007155 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PRINTS PR00691 Adhesin B signature 136 155 3.9E-11 T 23-04-2016 IPR006129 Adhesin B GO:0007155 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PRINTS PR00691 Adhesin B signature 283 301 3.9E-11 T 23-04-2016 IPR006129 Adhesin B GO:0007155 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PRINTS PR00691 Adhesin B signature 78 97 3.9E-11 T 23-04-2016 IPR006129 Adhesin B GO:0007155 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PRINTS PR00690 Adhesin family signature 78 95 1.6E-8 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PRINTS PR00690 Adhesin family signature 65 78 1.6E-8 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PRINTS PR00690 Adhesin family signature 247 265 1.6E-8 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PRINTS PR00690 Adhesin family signature 194 215 1.6E-8 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 Gene3D G3DSA:3.40.50.1980 187 305 1.9E-27 T 23-04-2016 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 Pfam PF01297 Zinc-uptake complex component A periplasmic 40 302 3.9E-55 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PANTHER PTHR30477:SF15 1 307 1.0E-153 T 23-04-2016 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 PANTHER PTHR30477 1 307 1.0E-153 T 23-04-2016 LT40_RS06815 de001720a52e2c7883343a2990ba89ec 309 Gene3D G3DSA:3.40.50.1980 29 186 4.7E-41 T 23-04-2016 LT40_RS05615 ba2d7d93d07c8d7f424399d3a9ab4093 198 SMART SM01144 2 187 7.6E-68 T 23-04-2016 IPR005636 DTW LT40_RS05615 ba2d7d93d07c8d7f424399d3a9ab4093 198 Pfam PF03942 DTW domain 3 181 1.0E-46 T 23-04-2016 IPR005636 DTW LT40_RS05615 ba2d7d93d07c8d7f424399d3a9ab4093 198 PANTHER PTHR21392 3 196 6.2E-55 T 23-04-2016 LT40_RS07435 2f883adbbae8c0acd48c7ab4f09880de 446 PANTHER PTHR32507 1 271 8.5E-135 T 23-04-2016 LT40_RS07435 2f883adbbae8c0acd48c7ab4f09880de 446 PANTHER PTHR32507 315 443 8.5E-135 T 23-04-2016 LT40_RS07435 2f883adbbae8c0acd48c7ab4f09880de 446 PANTHER PTHR32507:SF12 1 271 8.5E-135 T 23-04-2016 LT40_RS07435 2f883adbbae8c0acd48c7ab4f09880de 446 PANTHER PTHR32507:SF12 315 443 8.5E-135 T 23-04-2016 LT40_RS07435 2f883adbbae8c0acd48c7ab4f09880de 446 Pfam PF00999 Sodium/hydrogen exchanger family 328 437 5.0E-9 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LT40_RS07435 2f883adbbae8c0acd48c7ab4f09880de 446 Pfam PF00999 Sodium/hydrogen exchanger family 12 274 5.0E-24 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 PANTHER PTHR23305 1 366 1.4E-203 T 23-04-2016 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 Gene3D G3DSA:3.10.20.30 270 366 7.6E-51 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 Gene3D G3DSA:3.40.50.300 4 130 1.1E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 Gene3D G3DSA:3.40.50.300 203 269 1.1E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 Pfam PF01926 50S ribosome-binding GTPase 5 119 8.7E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 44.661 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 2.2E-40 T 23-04-2016 IPR013029 Domain of unknown function DUF933 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.2E-32 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-32 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.2E-32 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.2E-32 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 Gene3D G3DSA:1.10.150.300 131 202 1.4E-24 T 23-04-2016 IPR023192 TGS-like domain LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 PANTHER PTHR23305:SF12 1 366 1.4E-203 T 23-04-2016 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 SUPERFAMILY SSF81271 282 363 2.4E-37 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 PIRSF PIRSF006641 1 366 2.1E-156 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 SUPERFAMILY SSF52540 3 304 1.54E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19790 50461d10da6bfe3cf18848b1ab0e3cd0 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 2.3E-156 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 Gene3D G3DSA:2.40.50.180 60 97 5.3E-4 T 23-04-2016 LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 Pfam PF01584 CheW-like domain 21 156 5.6E-35 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 PIRSF PIRSF002867 1 308 8.2E-106 T 23-04-2016 IPR024181 Chemotaxis response regulator CheV LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 PANTHER PTHR22617 1 169 2.0E-94 T 23-04-2016 LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 PANTHER PTHR22617:SF30 1 169 2.0E-94 T 23-04-2016 LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 SUPERFAMILY SSF50341 16 156 7.06E-36 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 SMART SM00260 17 153 4.2E-21 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 SMART SM00448 179 300 1.1E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 Pfam PF00072 Response regulator receiver domain 181 300 2.8E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 Gene3D G3DSA:3.40.50.2300 178 301 1.4E-28 T 23-04-2016 LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 SUPERFAMILY SSF52172 179 302 2.85E-25 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS02285 b1b07704ed57865eae17bd68c2c6f9c3 308 Gene3D G3DSA:2.30.30.40 98 144 4.2E-7 T 23-04-2016 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Pfam PF00512 His Kinase A (phospho-acceptor) domain 451 516 1.6E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SUPERFAMILY SSF47384 442 515 1.77E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SUPERFAMILY SSF55785 295 404 4.71E-16 T 23-04-2016 IPR000014 PAS domain LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Gene3D G3DSA:3.30.450.20 260 419 4.9E-21 T 23-04-2016 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Gene3D G3DSA:3.30.450.20 5 147 3.3E-30 T 23-04-2016 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SMART SM00387 559 681 5.9E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Pfam PF00072 Response regulator receiver domain 705 816 3.3E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Gene3D G3DSA:1.10.287.130 443 504 2.7E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 PANTHER PTHR24423:SF527 22 418 2.5E-185 T 23-04-2016 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SUPERFAMILY SSF55785 137 263 8.19E-11 T 23-04-2016 IPR000014 PAS domain LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 PANTHER PTHR24423:SF527 446 820 2.5E-185 T 23-04-2016 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SMART SM00086 361 403 4.6E-6 T 23-04-2016 IPR001610 PAC motif LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SMART SM00086 97 139 2.1E-4 T 23-04-2016 IPR001610 PAC motif LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 334 409 1.5E-6 T 23-04-2016 IPR000014 PAS domain LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 146 4.5E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SMART SM00091 22 90 1.4E-8 T 23-04-2016 IPR000014 PAS domain LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Gene3D G3DSA:3.40.50.2300 701 820 6.2E-32 T 23-04-2016 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SUPERFAMILY SSF55874 509 683 3.41E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SMART SM00448 703 816 1.6E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 624 1.6E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 638 1.6E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 678 1.6E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 PRINTS PR00344 Bacterial sensor protein C-terminal signature 641 659 1.6E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 PANTHER PTHR24423 446 820 2.5E-185 T 23-04-2016 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 PANTHER PTHR24423 22 418 2.5E-185 T 23-04-2016 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Pfam PF08447 PAS fold 309 396 3.6E-18 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Pfam PF08447 PAS fold 45 132 1.7E-18 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SUPERFAMILY SSF55785 11 137 2.44E-22 T 23-04-2016 IPR000014 PAS domain LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Pfam PF13188 PAS domain 151 216 1.7E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Gene3D G3DSA:3.30.450.20 148 259 6.4E-15 T 23-04-2016 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SMART SM00388 450 518 3.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 560 679 2.1E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 SUPERFAMILY SSF52172 703 820 2.28E-25 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS06305 aa07c398c62897880bcb80f1637e14c0 822 Gene3D G3DSA:3.30.565.10 505 679 6.7E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 SUPERFAMILY SSF64518 1 479 7.06E-107 T 23-04-2016 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 Pfam PF07196 Flagellin hook IN motif 246 298 1.2E-6 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.0E-43 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 PRINTS PR00207 Flagellin signature 37 54 1.3E-25 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 PRINTS PR00207 Flagellin signature 111 134 1.3E-25 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 PRINTS PR00207 Flagellin signature 76 95 1.3E-25 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 PANTHER PTHR30244:SF1 291 354 1.3E-124 T 23-04-2016 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 PANTHER PTHR30244:SF1 389 479 1.3E-124 T 23-04-2016 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 PANTHER PTHR30244:SF1 2 181 1.3E-124 T 23-04-2016 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 Pfam PF00700 Bacterial flagellin C-terminal helical region 394 478 5.2E-27 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 PANTHER PTHR30244 291 354 1.3E-124 T 23-04-2016 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 PANTHER PTHR30244 389 479 1.3E-124 T 23-04-2016 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 PANTHER PTHR30244 2 181 1.3E-124 T 23-04-2016 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 Gene3D G3DSA:1.20.1330.10 54 171 2.6E-62 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LT40_RS02360 81eeebaa1cb246c98705d2b64b75a775 479 Gene3D G3DSA:1.20.1330.10 381 435 2.6E-62 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 LT40_RS19870 a1ef2382256393e49e11348fec895b20 320 PANTHER PTHR30087 1 320 4.8E-129 T 23-04-2016 LT40_RS19870 a1ef2382256393e49e11348fec895b20 320 PANTHER PTHR30087:SF0 1 320 4.8E-129 T 23-04-2016 LT40_RS19870 a1ef2382256393e49e11348fec895b20 320 Pfam PF08349 Protein of unknown function (DUF1722) 195 311 3.3E-41 T 23-04-2016 IPR013560 Domain of unknown function DUF1722 LT40_RS19870 a1ef2382256393e49e11348fec895b20 320 Pfam PF04463 Protein of unknown function (DUF523) 11 152 4.7E-34 T 23-04-2016 IPR007553 Domain of unknown function DUF523 LT40_RS19870 a1ef2382256393e49e11348fec895b20 320 PIRSF PIRSF037004 1 320 1.7E-125 T 23-04-2016 IPR017087 Uncharacterised conserved protein UCP037004 LT40_RS06435 93ae9e57cc02bcfd5a4b63182c0f2d4f 365 SUPERFAMILY SSF52821 9 64 8.79E-20 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS06435 93ae9e57cc02bcfd5a4b63182c0f2d4f 365 SUPERFAMILY SSF52821 92 155 8.79E-20 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS06435 93ae9e57cc02bcfd5a4b63182c0f2d4f 365 SMART SM00450 2 132 1.2E-7 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS06435 93ae9e57cc02bcfd5a4b63182c0f2d4f 365 Gene3D G3DSA:3.40.50.300 142 254 3.5E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06435 93ae9e57cc02bcfd5a4b63182c0f2d4f 365 PANTHER PTHR30401:SF0 7 361 1.7E-179 T 23-04-2016 LT40_RS06435 93ae9e57cc02bcfd5a4b63182c0f2d4f 365 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 16 346 2.4E-109 T 23-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 LT40_RS06435 93ae9e57cc02bcfd5a4b63182c0f2d4f 365 Gene3D G3DSA:3.40.250.10 12 131 9.2E-30 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS06435 93ae9e57cc02bcfd5a4b63182c0f2d4f 365 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 361 54.061 T 23-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 LT40_RS06435 93ae9e57cc02bcfd5a4b63182c0f2d4f 365 PANTHER PTHR30401 7 361 1.7E-179 T 23-04-2016 LT40_RS06435 93ae9e57cc02bcfd5a4b63182c0f2d4f 365 SUPERFAMILY SSF52540 142 254 2.22E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20500 7add2d222a7349d68f4b646be3787647 260 SUPERFAMILY SSF103088 134 246 3.01E-39 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS20500 7add2d222a7349d68f4b646be3787647 260 ProSitePatterns PS01068 OmpA-like domain. 178 222 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 LT40_RS20500 7add2d222a7349d68f4b646be3787647 260 Pfam PF00691 OmpA family 145 240 1.4E-24 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS20500 7add2d222a7349d68f4b646be3787647 260 PANTHER PTHR30128 132 257 1.1E-47 T 23-04-2016 LT40_RS20500 7add2d222a7349d68f4b646be3787647 260 PRINTS PR01021 OMPA domain signature 146 168 1.8E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS20500 7add2d222a7349d68f4b646be3787647 260 PRINTS PR01021 OMPA domain signature 191 207 1.8E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS20500 7add2d222a7349d68f4b646be3787647 260 PRINTS PR01021 OMPA domain signature 176 191 1.8E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS20500 7add2d222a7349d68f4b646be3787647 260 Pfam PF14346 Domain of unknown function (DUF4398) 15 113 9.2E-12 T 23-04-2016 IPR025511 Domain of unknown function DUF4398 LT40_RS20500 7add2d222a7349d68f4b646be3787647 260 Gene3D G3DSA:3.30.1330.60 134 246 2.7E-41 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS12455 e735fa42c8d9f9a57ec3213ac6a6bbad 516 PANTHER PTHR10799 224 513 7.3E-35 T 23-04-2016 LT40_RS12455 e735fa42c8d9f9a57ec3213ac6a6bbad 516 Pfam PF03924 CHASE domain 80 250 5.3E-10 T 23-04-2016 IPR006189 CHASE domain LT40_RS12455 e735fa42c8d9f9a57ec3213ac6a6bbad 516 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 508 9.3E-50 T 23-04-2016 IPR000160 GGDEF domain LT40_RS12455 e735fa42c8d9f9a57ec3213ac6a6bbad 516 Gene3D G3DSA:3.30.70.270 353 512 1.0E-52 T 23-04-2016 LT40_RS12455 e735fa42c8d9f9a57ec3213ac6a6bbad 516 SUPERFAMILY SSF55073 357 512 1.1E-47 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS12455 e735fa42c8d9f9a57ec3213ac6a6bbad 516 SMART SM00267 341 513 1.8E-59 T 23-04-2016 IPR000160 GGDEF domain LT40_RS12455 e735fa42c8d9f9a57ec3213ac6a6bbad 516 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 512 3.5E-44 T 23-04-2016 IPR000160 GGDEF domain LT40_RS12455 e735fa42c8d9f9a57ec3213ac6a6bbad 516 PANTHER PTHR10799:SF774 224 513 7.3E-35 T 23-04-2016 LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 Pfam PF07676 WD40-like Beta Propeller Repeat 202 227 2.5E-4 T 23-04-2016 IPR011659 WD40-like Beta Propeller LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 Pfam PF07676 WD40-like Beta Propeller Repeat 280 315 2.1E-14 T 23-04-2016 IPR011659 WD40-like Beta Propeller LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 Pfam PF07676 WD40-like Beta Propeller Repeat 378 401 0.19 T 23-04-2016 IPR011659 WD40-like Beta Propeller LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 6.3E-9 T 23-04-2016 IPR011659 WD40-like Beta Propeller LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 SUPERFAMILY SSF52964 29 159 8.37E-39 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 PANTHER PTHR11731 8 121 1.3E-101 T 23-04-2016 LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 18 430 8.2E-155 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 PANTHER PTHR11731:SF123 158 431 1.3E-101 T 23-04-2016 LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 Gene3D G3DSA:2.130.10.10 151 431 1.4E-71 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 PANTHER PTHR11731:SF123 8 121 1.3E-101 T 23-04-2016 LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 PANTHER PTHR11731 158 431 1.3E-101 T 23-04-2016 LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 Hamap MF_00671 Protein TolB [tolB]. 5 429 35.089 T 23-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 Pfam PF04052 TolB amino-terminal domain 25 126 2.2E-29 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 Gene3D G3DSA:3.40.50.10070 25 150 7.7E-45 T 23-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 LT40_RS04980 5e98b3aef831a7f2175a8f3687feaa81 434 SUPERFAMILY SSF69304 153 431 1.57E-52 T 23-04-2016 LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 288 4.7E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 PANTHER PTHR24423 166 437 3.3E-51 T 23-04-2016 LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 PANTHER PTHR24423 113 140 3.3E-51 T 23-04-2016 LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 SUPERFAMILY SSF47384 208 287 4.51E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 SMART SM00388 225 289 4.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 Gene3D G3DSA:3.30.565.10 318 440 1.2E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 Gene3D G3DSA:1.10.287.130 221 285 4.3E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 SUPERFAMILY SSF55874 314 437 1.1E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 SMART SM00387 334 440 3.0E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 Pfam PF08521 Two-component sensor kinase N-terminal 16 146 2.4E-8 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 PANTHER PTHR24423:SF474 166 437 3.3E-51 T 23-04-2016 LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 PANTHER PTHR24423:SF474 113 140 3.3E-51 T 23-04-2016 LT40_RS05605 01b7620f08fd7bc55dbf759583216644 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 438 3.7E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 Gene3D G3DSA:3.10.150.10 129 249 3.9E-36 T 23-04-2016 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 SUPERFAMILY SSF55979 1 120 4.49E-30 T 23-04-2016 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 Gene3D G3DSA:3.10.150.10 1 120 7.9E-36 T 23-04-2016 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 244 3.3E-39 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 Gene3D G3DSA:3.10.150.10 250 367 3.9E-38 T 23-04-2016 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 SUPERFAMILY SSF55979 246 367 7.73E-37 T 23-04-2016 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 366 1.0E-41 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 SMART SM00480 17 363 1.9E-166 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 1.9E-109 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 SUPERFAMILY SSF55979 132 245 1.29E-28 T 23-04-2016 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 3.3E-43 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 PANTHER PTHR30478 2 367 7.6E-147 T 23-04-2016 LT40_RS16040 27963bd6200ac3f3535a68d01f7e6bc8 367 PIRSF PIRSF000804 1 367 3.1E-123 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS08850 4c59674b182ce0b3408624c123f96ced 376 SUPERFAMILY SSF55781 20 165 8.83E-12 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08850 4c59674b182ce0b3408624c123f96ced 376 SUPERFAMILY SSF55874 254 333 1.44E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08850 4c59674b182ce0b3408624c123f96ced 376 SUPERFAMILY SSF47384 173 241 1.84E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08850 4c59674b182ce0b3408624c123f96ced 376 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 238 1.5E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08850 4c59674b182ce0b3408624c123f96ced 376 Gene3D G3DSA:1.10.287.130 173 238 3.4E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08850 4c59674b182ce0b3408624c123f96ced 376 PANTHER PTHR24423 176 327 1.3E-20 T 23-04-2016 LT40_RS08850 4c59674b182ce0b3408624c123f96ced 376 Gene3D G3DSA:3.30.565.10 254 333 2.5E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08850 4c59674b182ce0b3408624c123f96ced 376 Gene3D G3DSA:3.30.450.40 103 164 1.3E-4 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08850 4c59674b182ce0b3408624c123f96ced 376 SMART SM00388 177 242 4.2E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01505 09146b3130fd088d5824bd0eb08d4460 243 Pfam PF00795 Carbon-nitrogen hydrolase 5 234 1.1E-22 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS01505 09146b3130fd088d5824bd0eb08d4460 243 PANTHER PTHR23088:SF5 1 238 3.0E-24 T 23-04-2016 LT40_RS01505 09146b3130fd088d5824bd0eb08d4460 243 Gene3D G3DSA:3.60.110.10 1 234 4.7E-41 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS01505 09146b3130fd088d5824bd0eb08d4460 243 SUPERFAMILY SSF56317 1 235 2.88E-44 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS01505 09146b3130fd088d5824bd0eb08d4460 243 PANTHER PTHR23088 1 238 3.0E-24 T 23-04-2016 LT40_RS14545 57f7670a98f057e6fad21c0fc40eb07f 129 PANTHER PTHR26402 7 124 4.1E-74 T 23-04-2016 LT40_RS14545 57f7670a98f057e6fad21c0fc40eb07f 129 Gene3D G3DSA:3.40.50.2300 7 123 2.2E-34 T 23-04-2016 LT40_RS14545 57f7670a98f057e6fad21c0fc40eb07f 129 SMART SM00448 7 120 3.5E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS14545 57f7670a98f057e6fad21c0fc40eb07f 129 PANTHER PTHR26402:SF568 7 124 4.1E-74 T 23-04-2016 LT40_RS14545 57f7670a98f057e6fad21c0fc40eb07f 129 SUPERFAMILY SSF52172 7 124 1.25E-34 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS14545 57f7670a98f057e6fad21c0fc40eb07f 129 Pfam PF00072 Response regulator receiver domain 9 120 1.2E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 PANTHER PTHR32071 1 500 3.4E-188 T 23-04-2016 LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 Gene3D G3DSA:1.10.10.60 442 499 1.1E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 217 230 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 SUPERFAMILY SSF46689 445 499 4.48E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 SUPERFAMILY SSF52540 193 435 6.41E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 Pfam PF00158 Sigma-54 interaction domain 194 360 8.7E-65 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 Gene3D G3DSA:3.30.450.20 77 163 5.1E-9 T 23-04-2016 LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 SMART SM00091 79 143 2.0E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 SUPERFAMILY SSF55785 79 164 2.72E-7 T 23-04-2016 IPR000014 PAS domain LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 SMART SM00382 213 358 9.7E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 Gene3D G3DSA:3.40.50.300 190 366 6.5E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 Pfam PF13188 PAS domain 80 125 7.2E-5 T 23-04-2016 IPR000014 PAS domain LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 452 499 9.2E-26 T 23-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 PANTHER PTHR32071:SF3 1 500 3.4E-188 T 23-04-2016 LT40_RS03175 60f79ce1f2a055bb2a89e01a4ead4a32 502 Gene3D G3DSA:1.10.8.60 367 437 6.8E-22 T 23-04-2016 LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 Gene3D G3DSA:1.20.200.10 137 415 1.0E-99 T 23-04-2016 LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 458 2.4E-216 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 Gene3D G3DSA:1.10.275.10 2 136 5.5E-59 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 Pfam PF10415 Fumarase C C-terminus 406 458 5.5E-26 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 Gene3D G3DSA:1.10.40.30 416 458 5.2E-31 T 23-04-2016 LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 SUPERFAMILY SSF48557 3 458 2.67E-151 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 9.7E-5 T 23-04-2016 LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 9.7E-5 T 23-04-2016 LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 8.0E-31 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 8.0E-31 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 8.0E-31 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 8.0E-31 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 PANTHER PTHR11444:SF1 3 458 4.9E-230 T 23-04-2016 LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 PANTHER PTHR11444 3 458 4.9E-230 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 Pfam PF00206 Lyase 10 340 2.2E-103 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal LT40_RS06075 580a52348b166d86c4d6a5f20340ee74 458 Hamap MF_00743 Fumarate hydratase class II [fumC]. 2 458 88.162 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS11990 5a53bf4106be5634c652111e39d4cfdf 723 PANTHER PTHR32552 70 723 1.3E-153 T 23-04-2016 LT40_RS11990 5a53bf4106be5634c652111e39d4cfdf 723 PANTHER PTHR32552 32 48 1.3E-153 T 23-04-2016 LT40_RS11990 5a53bf4106be5634c652111e39d4cfdf 723 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 181 1.5E-21 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS11990 5a53bf4106be5634c652111e39d4cfdf 723 PANTHER PTHR32552:SF17 70 723 1.3E-153 T 23-04-2016 LT40_RS11990 5a53bf4106be5634c652111e39d4cfdf 723 PANTHER PTHR32552:SF17 32 48 1.3E-153 T 23-04-2016 LT40_RS11990 5a53bf4106be5634c652111e39d4cfdf 723 SUPERFAMILY SSF56935 35 723 3.43E-132 T 23-04-2016 LT40_RS11990 5a53bf4106be5634c652111e39d4cfdf 723 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 80 721 4.0E-115 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS11990 5a53bf4106be5634c652111e39d4cfdf 723 Pfam PF00593 TonB dependent receptor 492 721 3.4E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS11990 5a53bf4106be5634c652111e39d4cfdf 723 Gene3D G3DSA:2.170.130.10 34 193 4.5E-35 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS11990 5a53bf4106be5634c652111e39d4cfdf 723 Gene3D G3DSA:2.40.170.20 196 723 6.9E-143 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS01075 26cf29931ae641316208d7274fcd615c 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS01075 26cf29931ae641316208d7274fcd615c 254 SMART SM00382 28 225 1.3E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS01075 26cf29931ae641316208d7274fcd615c 254 Pfam PF00005 ABC transporter 19 178 1.1E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS01075 26cf29931ae641316208d7274fcd615c 254 PANTHER PTHR24220:SF347 5 254 6.2E-175 T 23-04-2016 LT40_RS01075 26cf29931ae641316208d7274fcd615c 254 SUPERFAMILY SSF52540 4 248 1.05E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01075 26cf29931ae641316208d7274fcd615c 254 PIRSF PIRSF039085 1 254 2.0E-114 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS01075 26cf29931ae641316208d7274fcd615c 254 PANTHER PTHR24220 5 254 6.2E-175 T 23-04-2016 LT40_RS01075 26cf29931ae641316208d7274fcd615c 254 Gene3D G3DSA:3.40.50.300 4 249 3.7E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 Pfam PF02785 Biotin carboxylase C-terminal domain 342 450 1.6E-36 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 Gene3D G3DSA:3.30.1490.20 135 208 9.3E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 PANTHER PTHR18866 6 639 0.0 T 23-04-2016 LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 594 611 - T 23-04-2016 IPR001882 Biotin-binding site LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 PANTHER PTHR18866:SF102 6 639 0.0 T 23-04-2016 LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 Pfam PF00289 Biotin carboxylase, N-terminal domain 9 116 2.2E-42 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 159 173 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 Gene3D G3DSA:3.30.470.20 211 454 4.1E-101 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 Pfam PF00364 Biotin-requiring enzyme 572 637 1.1E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 SUPERFAMILY SSF52440 4 119 1.51E-46 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 SUPERFAMILY SSF56059 89 351 1.94E-69 T 23-04-2016 LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 SUPERFAMILY SSF51246 338 455 8.37E-39 T 23-04-2016 IPR011054 Rudiment single hybrid motif LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 Gene3D G3DSA:3.40.50.20 10 134 2.7E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 Gene3D G3DSA:2.40.50.100 573 640 2.9E-23 T 23-04-2016 LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 122 328 5.6E-78 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 SUPERFAMILY SSF51230 566 637 3.27E-20 T 23-04-2016 IPR011053 Single hybrid motif LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS06880 ec04363367214a99e5daf5ad00725265 644 SMART SM00878 342 449 6.7E-54 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 501 645 2.1E-44 T 23-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 Pfam PF03445 Putative nucleotidyltransferase DUF294 325 463 1.4E-42 T 23-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 PANTHER PTHR11911 176 296 9.3E-20 T 23-04-2016 LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 Gene3D G3DSA:2.60.120.10 25 164 3.4E-13 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 Pfam PF00027 Cyclic nucleotide-binding domain 52 139 7.5E-10 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 SUPERFAMILY SSF51206 26 163 6.68E-17 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 SUPERFAMILY SSF54631 180 297 8.14E-24 T 23-04-2016 LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 SMART SM00116 188 236 6.3E-7 T 23-04-2016 IPR000644 CBS domain LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 SMART SM00116 253 300 0.91 T 23-04-2016 IPR000644 CBS domain LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 Gene3D G3DSA:3.10.580.10 176 296 4.7E-26 T 23-04-2016 LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 Pfam PF00571 CBS domain 247 298 3.0E-6 T 23-04-2016 IPR000644 CBS domain LT40_RS14105 0fcea4fe310edf439c05afc121c3a517 647 Pfam PF00571 CBS domain 182 236 1.5E-8 T 23-04-2016 IPR000644 CBS domain LT40_RS16160 541ec036b7ff400ddf7aa8217f3a6e05 251 SMART SM00079 30 248 0.0071 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LT40_RS16160 541ec036b7ff400ddf7aa8217f3a6e05 251 Gene3D G3DSA:3.40.190.10 210 248 1.7E-41 T 23-04-2016 LT40_RS16160 541ec036b7ff400ddf7aa8217f3a6e05 251 Gene3D G3DSA:3.40.190.10 28 106 1.7E-41 T 23-04-2016 LT40_RS16160 541ec036b7ff400ddf7aa8217f3a6e05 251 SMART SM00062 30 249 9.4E-65 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS16160 541ec036b7ff400ddf7aa8217f3a6e05 251 PANTHER PTHR18966:SF152 29 251 2.9E-43 T 23-04-2016 LT40_RS16160 541ec036b7ff400ddf7aa8217f3a6e05 251 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 52 65 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LT40_RS16160 541ec036b7ff400ddf7aa8217f3a6e05 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 247 1.4E-62 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS16160 541ec036b7ff400ddf7aa8217f3a6e05 251 PANTHER PTHR18966 29 251 2.9E-43 T 23-04-2016 LT40_RS16160 541ec036b7ff400ddf7aa8217f3a6e05 251 Gene3D G3DSA:3.40.190.10 107 209 1.8E-21 T 23-04-2016 LT40_RS16160 541ec036b7ff400ddf7aa8217f3a6e05 251 SUPERFAMILY SSF53850 10 248 1.03E-66 T 23-04-2016 LT40_RS13775 958179cc1a6ca1dd5dd6700def6af887 516 SUPERFAMILY SSF161098 11 245 1.02E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13775 958179cc1a6ca1dd5dd6700def6af887 516 SUPERFAMILY SSF161098 280 505 1.2E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13775 958179cc1a6ca1dd5dd6700def6af887 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 243 2.5E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13775 958179cc1a6ca1dd5dd6700def6af887 516 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 335 499 1.4E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13775 958179cc1a6ca1dd5dd6700def6af887 516 PANTHER PTHR30193 10 259 1.8E-82 T 23-04-2016 LT40_RS13775 958179cc1a6ca1dd5dd6700def6af887 516 PANTHER PTHR30193:SF3 10 259 1.8E-82 T 23-04-2016 LT40_RS13775 958179cc1a6ca1dd5dd6700def6af887 516 Gene3D G3DSA:1.10.3720.10 17 251 7.0E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13775 958179cc1a6ca1dd5dd6700def6af887 516 Gene3D G3DSA:1.10.3720.10 280 505 2.3E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11045 e542aba858e324778b7265c157a3d6f5 693 Pfam PF02446 4-alpha-glucanotransferase 157 662 1.0E-109 T 23-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 LT40_RS11045 e542aba858e324778b7265c157a3d6f5 693 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 112 672 3.7E-99 T 23-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 LT40_RS11045 e542aba858e324778b7265c157a3d6f5 693 PANTHER PTHR32438 583 686 2.6E-127 T 23-04-2016 LT40_RS11045 e542aba858e324778b7265c157a3d6f5 693 PANTHER PTHR32438 123 565 2.6E-127 T 23-04-2016 LT40_RS11045 e542aba858e324778b7265c157a3d6f5 693 SUPERFAMILY SSF51445 132 681 1.21E-133 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS11045 e542aba858e324778b7265c157a3d6f5 693 PANTHER PTHR32438:SF5 583 686 2.6E-127 T 23-04-2016 LT40_RS11045 e542aba858e324778b7265c157a3d6f5 693 PANTHER PTHR32438:SF5 123 565 2.6E-127 T 23-04-2016 LT40_RS11045 e542aba858e324778b7265c157a3d6f5 693 Gene3D G3DSA:3.20.20.80 150 577 1.3E-150 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11045 e542aba858e324778b7265c157a3d6f5 693 Gene3D G3DSA:3.20.20.80 610 678 1.3E-150 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS19225 fc5e9b0d81915f2565efd4e6730411b3 636 Gene3D G3DSA:3.20.20.150 1 264 1.2E-78 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS19225 fc5e9b0d81915f2565efd4e6730411b3 636 Pfam PF01261 Xylose isomerase-like TIM barrel 18 217 4.2E-38 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS19225 fc5e9b0d81915f2565efd4e6730411b3 636 SUPERFAMILY SSF51658 1 268 6.63E-77 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS19225 fc5e9b0d81915f2565efd4e6730411b3 636 PANTHER PTHR12110 1 275 2.2E-85 T 23-04-2016 LT40_RS19225 fc5e9b0d81915f2565efd4e6730411b3 636 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 295 427 2.0E-35 T 23-04-2016 LT40_RS19225 fc5e9b0d81915f2565efd4e6730411b3 636 Gene3D G3DSA:3.10.180.10 290 428 9.0E-37 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS19225 fc5e9b0d81915f2565efd4e6730411b3 636 PANTHER PTHR12110:SF14 1 275 2.2E-85 T 23-04-2016 LT40_RS19225 fc5e9b0d81915f2565efd4e6730411b3 636 SUPERFAMILY SSF54593 293 621 3.48E-61 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS19225 fc5e9b0d81915f2565efd4e6730411b3 636 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 442 579 1.2E-10 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LT40_RS19225 fc5e9b0d81915f2565efd4e6730411b3 636 Gene3D G3DSA:3.10.180.10 439 625 1.7E-42 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS11545 52f7d41686d565848895f35d00888f3f 289 PANTHER PTHR22981 1 195 1.7E-17 T 23-04-2016 LT40_RS11545 52f7d41686d565848895f35d00888f3f 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 126 4.0E-15 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LT40_RS11545 52f7d41686d565848895f35d00888f3f 289 SUPERFAMILY SSF51735 1 137 2.41E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11545 52f7d41686d565848895f35d00888f3f 289 SUPERFAMILY SSF48179 161 261 5.44E-19 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS11545 52f7d41686d565848895f35d00888f3f 289 Gene3D G3DSA:3.40.50.720 1 167 5.5E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11545 52f7d41686d565848895f35d00888f3f 289 Gene3D G3DSA:1.10.1040.10 168 268 5.2E-25 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS11545 52f7d41686d565848895f35d00888f3f 289 PANTHER PTHR22981:SF63 1 195 1.7E-17 T 23-04-2016 LT40_RS16900 f936312f95105c961abdbc30e7c1b7ce 138 PANTHER PTHR35091:SF1 6 138 3.2E-35 T 23-04-2016 LT40_RS16900 f936312f95105c961abdbc30e7c1b7ce 138 PANTHER PTHR35091 6 138 3.2E-35 T 23-04-2016 LT40_RS16900 f936312f95105c961abdbc30e7c1b7ce 138 Pfam PF03748 Flagellar basal body-associated protein FliL 35 138 4.7E-19 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 LT40_RS13880 5e88d5c41eed30dbcc1b1afb6f605e74 180 Hamap MF_00045 Oligoribonuclease [orn]. 2 180 43.529 T 23-04-2016 IPR022894 Oligoribonuclease GO:0016788 LT40_RS13880 5e88d5c41eed30dbcc1b1afb6f605e74 180 SUPERFAMILY SSF53098 1 179 3.33E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS13880 5e88d5c41eed30dbcc1b1afb6f605e74 180 PANTHER PTHR11046 1 180 2.1E-122 T 23-04-2016 LT40_RS13880 5e88d5c41eed30dbcc1b1afb6f605e74 180 PANTHER PTHR11046:SF1 1 180 2.1E-122 T 23-04-2016 LT40_RS13880 5e88d5c41eed30dbcc1b1afb6f605e74 180 Gene3D G3DSA:3.30.420.10 3 178 6.0E-74 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS13880 5e88d5c41eed30dbcc1b1afb6f605e74 180 Pfam PF00929 Exonuclease 8 169 1.2E-33 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS13880 5e88d5c41eed30dbcc1b1afb6f605e74 180 SMART SM00479 6 179 1.2E-24 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS12665 d4031a6eb6487bce6cc8026df1ccc0b6 630 Gene3D G3DSA:3.90.1310.10 131 249 7.8E-38 T 23-04-2016 LT40_RS12665 d4031a6eb6487bce6cc8026df1ccc0b6 630 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 604 2.4E-72 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LT40_RS12665 d4031a6eb6487bce6cc8026df1ccc0b6 630 Gene3D G3DSA:3.40.710.10 250 607 5.9E-105 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS12665 d4031a6eb6487bce6cc8026df1ccc0b6 630 SUPERFAMILY SSF56519 56 250 2.35E-50 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LT40_RS12665 d4031a6eb6487bce6cc8026df1ccc0b6 630 SUPERFAMILY SSF56601 251 607 1.75E-97 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS12665 d4031a6eb6487bce6cc8026df1ccc0b6 630 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 236 3.1E-46 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LT40_RS12665 d4031a6eb6487bce6cc8026df1ccc0b6 630 PANTHER PTHR30627:SF2 5 608 5.0E-230 T 23-04-2016 LT40_RS12665 d4031a6eb6487bce6cc8026df1ccc0b6 630 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 607 1.5E-227 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 LT40_RS12665 d4031a6eb6487bce6cc8026df1ccc0b6 630 PANTHER PTHR30627 5 608 5.0E-230 T 23-04-2016 LT40_RS04135 476fc0bb73aa80414ba760833522ea52 512 PANTHER PTHR12778 16 215 3.6E-89 T 23-04-2016 LT40_RS04135 476fc0bb73aa80414ba760833522ea52 512 PANTHER PTHR12778 300 506 3.6E-89 T 23-04-2016 LT40_RS04135 476fc0bb73aa80414ba760833522ea52 512 TIGRFAM TIGR00901 2A0125: AmpG-like permease 29 455 4.2E-128 T 23-04-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 LT40_RS04135 476fc0bb73aa80414ba760833522ea52 512 Pfam PF13000 Acetyl-coenzyme A transporter 1 20 106 1.1E-7 T 23-04-2016 IPR024371 Acetyl-coenzyme A transporter 1 GO:0008521|GO:0016021 LT40_RS04135 476fc0bb73aa80414ba760833522ea52 512 Gene3D G3DSA:1.20.1250.20 319 505 9.8E-13 T 23-04-2016 LT40_RS04135 476fc0bb73aa80414ba760833522ea52 512 SUPERFAMILY SSF103473 299 502 1.05E-29 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04135 476fc0bb73aa80414ba760833522ea52 512 SUPERFAMILY SSF103473 3 225 1.05E-29 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04135 476fc0bb73aa80414ba760833522ea52 512 Gene3D G3DSA:1.20.1250.20 16 214 1.8E-14 T 23-04-2016 LT40_RS08270 655a34418af46b97db61230f94c1c8df 330 Gene3D G3DSA:3.40.50.1980 177 325 1.7E-27 T 23-04-2016 LT40_RS08270 655a34418af46b97db61230f94c1c8df 330 SUPERFAMILY SSF53807 42 312 5.89E-61 T 23-04-2016 LT40_RS08270 655a34418af46b97db61230f94c1c8df 330 PANTHER PTHR30532:SF4 1 330 1.4E-78 T 23-04-2016 LT40_RS08270 655a34418af46b97db61230f94c1c8df 330 Pfam PF01497 Periplasmic binding protein 66 304 1.4E-29 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LT40_RS08270 655a34418af46b97db61230f94c1c8df 330 PANTHER PTHR30532 1 330 1.4E-78 T 23-04-2016 LT40_RS08270 655a34418af46b97db61230f94c1c8df 330 Gene3D G3DSA:3.40.50.1980 47 176 3.3E-30 T 23-04-2016 LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 42 691 54.532 T 23-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 Pfam PF13538 UvrD-like helicase C-terminal domain 619 666 2.0E-16 T 23-04-2016 IPR027785 UvrD-like helicase C-terminal domain LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 PANTHER PTHR10887:SF351 195 371 3.3E-91 T 23-04-2016 LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 PANTHER PTHR10887:SF351 80 106 3.3E-91 T 23-04-2016 LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 Pfam PF13604 AAA domain 204 370 1.8E-29 T 23-04-2016 LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 PANTHER PTHR10887 195 371 3.3E-91 T 23-04-2016 LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 PANTHER PTHR10887 80 106 3.3E-91 T 23-04-2016 LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 SUPERFAMILY SSF52540 402 433 1.59E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 SUPERFAMILY SSF52540 331 371 1.59E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 SUPERFAMILY SSF52540 513 671 1.59E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 34 688 3.7E-196 T 23-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 Gene3D G3DSA:3.40.50.300 531 549 2.3E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 Gene3D G3DSA:3.40.50.300 611 670 2.3E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 SUPERFAMILY SSF52540 33 415 8.08E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 Gene3D G3DSA:3.40.50.300 158 368 5.6E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13190 6e3ead13f644220411b0d1c28ebb17d4 693 Gene3D G3DSA:3.40.50.300 405 430 5.6E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19010 4df3246ee3b363ae16fde538f85c9a85 418 Gene3D G3DSA:2.40.160.10 30 418 7.4E-134 T 23-04-2016 IPR023614 Porin domain LT40_RS19010 4df3246ee3b363ae16fde538f85c9a85 418 PANTHER PTHR34596 1 418 1.2E-135 T 23-04-2016 LT40_RS19010 4df3246ee3b363ae16fde538f85c9a85 418 Pfam PF03573 outer membrane porin, OprD family 25 416 8.6E-134 T 23-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 LT40_RS14845 5e09b72f4c04ad2bd0954393e0be967f 183 Pfam PF01292 Prokaryotic cytochrome b561 9 180 7.2E-30 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LT40_RS14845 5e09b72f4c04ad2bd0954393e0be967f 183 PANTHER PTHR30529 2 183 5.5E-82 T 23-04-2016 LT40_RS14845 5e09b72f4c04ad2bd0954393e0be967f 183 PANTHER PTHR30529:SF5 2 183 5.5E-82 T 23-04-2016 LT40_RS14845 5e09b72f4c04ad2bd0954393e0be967f 183 SUPERFAMILY SSF81342 5 182 2.12E-40 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 LT40_RS04240 ebda96ddf1bee784f09faa38da0aa97d 349 PANTHER PTHR22893:SF14 1 347 9.4E-168 T 23-04-2016 LT40_RS04240 ebda96ddf1bee784f09faa38da0aa97d 349 Gene3D G3DSA:3.20.20.70 1 349 1.1E-128 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS04240 ebda96ddf1bee784f09faa38da0aa97d 349 SUPERFAMILY SSF51395 1 348 3.05E-120 T 23-04-2016 LT40_RS04240 ebda96ddf1bee784f09faa38da0aa97d 349 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 328 2.0E-81 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LT40_RS04240 ebda96ddf1bee784f09faa38da0aa97d 349 PANTHER PTHR22893 1 347 9.4E-168 T 23-04-2016 LT40_RS07035 a1177a746535dd0c3dc1b1763f68979d 443 SUPERFAMILY SSF51905 369 405 4.14E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07035 a1177a746535dd0c3dc1b1763f68979d 443 SUPERFAMILY SSF51905 36 259 4.14E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07035 a1177a746535dd0c3dc1b1763f68979d 443 PANTHER PTHR13847:SF196 1 402 2.2E-71 T 23-04-2016 LT40_RS07035 a1177a746535dd0c3dc1b1763f68979d 443 PANTHER PTHR13847 1 402 2.2E-71 T 23-04-2016 LT40_RS07035 a1177a746535dd0c3dc1b1763f68979d 443 Pfam PF01266 FAD dependent oxidoreductase 37 395 1.9E-33 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS07035 a1177a746535dd0c3dc1b1763f68979d 443 Gene3D G3DSA:3.50.50.60 27 125 1.5E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07035 a1177a746535dd0c3dc1b1763f68979d 443 Gene3D G3DSA:3.50.50.60 178 258 1.5E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07035 a1177a746535dd0c3dc1b1763f68979d 443 Gene3D G3DSA:3.50.50.60 359 404 1.5E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 Pfam PF00563 EAL domain 530 764 3.0E-73 T 23-04-2016 IPR001633 EAL domain LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 SMART SM00267 348 516 4.6E-30 T 23-04-2016 IPR000160 GGDEF domain LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 SUPERFAMILY SSF103190 54 162 5.49E-5 T 23-04-2016 IPR029151 Periplasmic sensor domain-like LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 SUPERFAMILY SSF55073 364 506 9.42E-32 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 SUPERFAMILY SSF158472 301 349 3.27E-9 T 23-04-2016 LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 Gene3D G3DSA:3.30.70.270 361 515 1.9E-34 T 23-04-2016 LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 SUPERFAMILY SSF141868 530 777 3.79E-86 T 23-04-2016 IPR001633 EAL domain LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 504 2.2E-26 T 23-04-2016 IPR000160 GGDEF domain LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 PANTHER PTHR33121:SF13 6 26 2.0E-70 T 23-04-2016 LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 PANTHER PTHR33121:SF13 477 777 2.0E-70 T 23-04-2016 LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 PANTHER PTHR33121 477 777 2.0E-70 T 23-04-2016 LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 355 504 8.0E-17 T 23-04-2016 IPR000160 GGDEF domain LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 PANTHER PTHR33121 6 26 2.0E-70 T 23-04-2016 LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 Gene3D G3DSA:3.20.20.450 528 775 4.8E-93 T 23-04-2016 IPR001633 EAL domain LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 Pfam PF14827 Double sensory domain of two-component sensor kinase 40 260 2.7E-17 T 23-04-2016 IPR029150 Double Cache domain 3 LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 Pfam PF00672 HAMP domain 282 347 3.4E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 SMART SM00052 524 769 9.4E-106 T 23-04-2016 IPR001633 EAL domain LT40_RS00095 95a03e64cdaa1380de1ea0dda9a5bed1 786 SMART SM00304 301 353 7.1E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS16035 30c4d3114f3cfd5449b320a6e869249a 367 SUPERFAMILY SSF52540 1 341 1.14E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16035 30c4d3114f3cfd5449b320a6e869249a 367 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 23-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 LT40_RS16035 30c4d3114f3cfd5449b320a6e869249a 367 PANTHER PTHR32182 1 361 5.9E-61 T 23-04-2016 LT40_RS16035 30c4d3114f3cfd5449b320a6e869249a 367 ProSitePatterns PS00618 RecF protein signature 2. 300 318 - T 23-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 LT40_RS16035 30c4d3114f3cfd5449b320a6e869249a 367 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 359 2.3E-113 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LT40_RS16035 30c4d3114f3cfd5449b320a6e869249a 367 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 367 93.793 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LT40_RS16035 30c4d3114f3cfd5449b320a6e869249a 367 PANTHER PTHR32182:SF0 1 361 5.9E-61 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LT40_RS16035 30c4d3114f3cfd5449b320a6e869249a 367 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 355 9.2E-35 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal LT40_RS16035 30c4d3114f3cfd5449b320a6e869249a 367 Gene3D G3DSA:3.40.50.300 1 169 4.6E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16035 30c4d3114f3cfd5449b320a6e869249a 367 Gene3D G3DSA:3.40.50.300 232 360 4.6E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 PIRSF PIRSF036480 1 283 1.6E-119 T 23-04-2016 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 PANTHER PTHR10520:SF7 1 276 1.3E-143 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 8.6E-61 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 8.6E-61 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 8.6E-61 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 8.6E-61 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 8.6E-61 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 8.6E-61 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 SUPERFAMILY SSF55021 3 84 1.21E-15 T 23-04-2016 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 282 2.0E-109 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 Gene3D G3DSA:3.40.50.170 87 282 2.3E-58 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 SUPERFAMILY SSF53328 87 283 4.84E-63 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 Gene3D G3DSA:3.30.70.260 1 82 1.4E-21 T 23-04-2016 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 PANTHER PTHR10520 1 276 1.3E-143 T 23-04-2016 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 282 49.093 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS04295 039fd08875abea4225a51ab6490f1495 283 Pfam PF00551 Formyl transferase 87 262 4.1E-41 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 SUPERFAMILY SSF51735 5 160 6.05E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 PIRSF PIRSF000193 3 270 9.8E-81 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 SUPERFAMILY SSF48179 162 270 1.12E-33 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 Gene3D G3DSA:1.10.3730.10 162 267 2.0E-36 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 PANTHER PTHR11645 1 273 2.0E-113 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 PANTHER PTHR11645:SF0 1 273 2.0E-113 T 23-04-2016 LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 Gene3D G3DSA:3.40.50.720 2 160 5.7E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 2.3E-23 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 267 26.962 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 223 245 - T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 267 2.2E-35 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LT40_RS14605 6cb0b0efe69919092968b5fb987f2e87 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 267 1.8E-80 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 LT40_RS03400 f2bc060dffe21f2464cfde37423fa149 377 PANTHER PTHR21148:SF26 1 369 4.3E-175 T 23-04-2016 LT40_RS03400 f2bc060dffe21f2464cfde37423fa149 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 7 363 56.349 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS03400 f2bc060dffe21f2464cfde37423fa149 377 SUPERFAMILY SSF51713 6 368 8.11E-160 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS03400 f2bc060dffe21f2464cfde37423fa149 377 PANTHER PTHR21148 1 369 4.3E-175 T 23-04-2016 LT40_RS03400 f2bc060dffe21f2464cfde37423fa149 377 Gene3D G3DSA:3.20.20.105 5 369 4.7E-164 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS03400 f2bc060dffe21f2464cfde37423fa149 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 9 370 2.5E-157 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS03400 f2bc060dffe21f2464cfde37423fa149 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 132 365 1.9E-88 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS03400 f2bc060dffe21f2464cfde37423fa149 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 9 371 2.3E-165 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS20260 5d1a667753f3c84e6cb9e0f2b1c13f5e 145 Pfam PF14437 MafB19-like deaminase 1 142 7.9E-29 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 LT40_RS20260 5d1a667753f3c84e6cb9e0f2b1c13f5e 145 Gene3D G3DSA:3.40.140.10 1 140 2.3E-55 T 23-04-2016 LT40_RS20260 5d1a667753f3c84e6cb9e0f2b1c13f5e 145 SUPERFAMILY SSF53927 1 142 2.17E-53 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LT40_RS20260 5d1a667753f3c84e6cb9e0f2b1c13f5e 145 PANTHER PTHR11079 1 144 1.5E-42 T 23-04-2016 LT40_RS20260 5d1a667753f3c84e6cb9e0f2b1c13f5e 145 PANTHER PTHR11079:SF72 1 144 1.5E-42 T 23-04-2016 LT40_RS20260 5d1a667753f3c84e6cb9e0f2b1c13f5e 145 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LT40_RS20260 5d1a667753f3c84e6cb9e0f2b1c13f5e 145 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 142 44.649 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 LT40_RS15085 4eeb16e9c2ce401ace8b556b70079080 673 Pfam PF10442 FIST C domain 269 389 3.9E-16 T 23-04-2016 IPR019494 FIST, C-domain LT40_RS15085 4eeb16e9c2ce401ace8b556b70079080 673 SMART SM00897 37 257 1.5E-48 T 23-04-2016 IPR013702 FIST domain, N-terminal LT40_RS15085 4eeb16e9c2ce401ace8b556b70079080 673 SMART SM01204 263 392 4.0E-26 T 23-04-2016 IPR019494 FIST, C-domain LT40_RS15085 4eeb16e9c2ce401ace8b556b70079080 673 PANTHER PTHR32089:SF1 485 673 9.9E-33 T 23-04-2016 LT40_RS15085 4eeb16e9c2ce401ace8b556b70079080 673 SMART SM00283 470 672 1.2E-13 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS15085 4eeb16e9c2ce401ace8b556b70079080 673 Pfam PF08495 FIST N domain 40 249 2.1E-21 T 23-04-2016 IPR013702 FIST domain, N-terminal LT40_RS15085 4eeb16e9c2ce401ace8b556b70079080 673 Gene3D G3DSA:1.10.287.950 485 665 1.6E-39 T 23-04-2016 LT40_RS15085 4eeb16e9c2ce401ace8b556b70079080 673 PANTHER PTHR32089 485 673 9.9E-33 T 23-04-2016 LT40_RS15085 4eeb16e9c2ce401ace8b556b70079080 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 522 664 1.6E-30 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS15085 4eeb16e9c2ce401ace8b556b70079080 673 SUPERFAMILY SSF58104 483 664 2.62E-43 T 23-04-2016 LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 Gene3D G3DSA:2.40.50.100 3 89 6.5E-22 T 23-04-2016 LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 SUPERFAMILY SSF47005 132 176 1.83E-10 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 SUPERFAMILY SSF52777 186 420 2.05E-78 T 23-04-2016 LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 PANTHER PTHR23151 1 421 2.7E-191 T 23-04-2016 LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 Pfam PF00364 Biotin-requiring enzyme 5 77 7.2E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 Pfam PF02817 e3 binding domain 137 171 1.9E-12 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 193 420 4.5E-79 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 Gene3D G3DSA:4.10.320.10 132 177 2.0E-16 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 PANTHER PTHR23151:SF62 1 421 2.7E-191 T 23-04-2016 LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 Gene3D G3DSA:3.30.559.10 192 420 1.9E-81 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain LT40_RS10735 c3f71839975b4a489482dc8e1e5ae7b7 421 SUPERFAMILY SSF51230 3 89 1.24E-22 T 23-04-2016 IPR011053 Single hybrid motif LT40_RS12000 4328772aa3e6e219b0176be5c7ccd48e 319 PRINTS PR00116 Arginase signature 125 140 1.3E-13 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LT40_RS12000 4328772aa3e6e219b0176be5c7ccd48e 319 PRINTS PR00116 Arginase signature 238 267 1.3E-13 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LT40_RS12000 4328772aa3e6e219b0176be5c7ccd48e 319 Pfam PF00491 Arginase family 39 310 9.2E-90 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LT40_RS12000 4328772aa3e6e219b0176be5c7ccd48e 319 TIGRFAM TIGR01230 agmatinase: agmatinase 39 311 1.2E-63 T 23-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 LT40_RS12000 4328772aa3e6e219b0176be5c7ccd48e 319 SUPERFAMILY SSF52768 6 313 2.88E-100 T 23-04-2016 LT40_RS12000 4328772aa3e6e219b0176be5c7ccd48e 319 PIRSF PIRSF036979 15 316 5.0E-102 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LT40_RS12000 4328772aa3e6e219b0176be5c7ccd48e 319 PANTHER PTHR11358:SF27 1 316 8.0E-201 T 23-04-2016 LT40_RS12000 4328772aa3e6e219b0176be5c7ccd48e 319 PANTHER PTHR11358 1 316 8.0E-201 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 LT40_RS12000 4328772aa3e6e219b0176be5c7ccd48e 319 Gene3D G3DSA:3.40.800.10 8 313 5.9E-126 T 23-04-2016 IPR023696 Ureohydrolase domain LT40_RS12000 4328772aa3e6e219b0176be5c7ccd48e 319 ProSitePatterns PS01053 Arginase family signature. 241 262 - T 23-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 LT40_RS01095 b4103292215c3c7068fac3cf6013d378 342 PANTHER PTHR30420:SF1 1 342 4.0E-179 T 23-04-2016 LT40_RS01095 b4103292215c3c7068fac3cf6013d378 342 Gene3D G3DSA:3.40.630.30 1 138 1.9E-6 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS01095 b4103292215c3c7068fac3cf6013d378 342 Gene3D G3DSA:2.40.40.20 277 334 7.2E-5 T 23-04-2016 LT40_RS01095 b4103292215c3c7068fac3cf6013d378 342 SUPERFAMILY SSF55729 1 334 3.17E-125 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS01095 b4103292215c3c7068fac3cf6013d378 342 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 2 333 8.7E-141 T 23-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 LT40_RS01095 b4103292215c3c7068fac3cf6013d378 342 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 333 3.5E-134 T 23-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 LT40_RS01095 b4103292215c3c7068fac3cf6013d378 342 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 2 333 5.7E-151 T 23-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 LT40_RS01095 b4103292215c3c7068fac3cf6013d378 342 PANTHER PTHR30420 1 342 4.0E-179 T 23-04-2016 LT40_RS09105 17e0a423ec92fea58c2b3a8db9bd6524 255 PANTHER PTHR22572:SF16 2 255 6.8E-155 T 23-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 LT40_RS09105 17e0a423ec92fea58c2b3a8db9bd6524 255 Pfam PF00483 Nucleotidyl transferase 2 200 8.8E-19 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LT40_RS09105 17e0a423ec92fea58c2b3a8db9bd6524 255 SUPERFAMILY SSF53448 1 253 4.59E-67 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09105 17e0a423ec92fea58c2b3a8db9bd6524 255 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 255 8.3E-127 T 23-04-2016 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940|UniPathway: UPA00055|UniPathway: UPA00281 LT40_RS09105 17e0a423ec92fea58c2b3a8db9bd6524 255 Gene3D G3DSA:3.90.550.10 1 253 6.8E-65 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09105 17e0a423ec92fea58c2b3a8db9bd6524 255 PANTHER PTHR22572 2 255 6.8E-155 T 23-04-2016 LT40_RS10780 87ec5b9d9325b041845d34dcc633b6e7 130 Gene3D G3DSA:3.40.1260.10 1 127 1.4E-21 T 23-04-2016 IPR027396 DsrEFH-like LT40_RS10780 87ec5b9d9325b041845d34dcc633b6e7 130 PANTHER PTHR34874 1 129 3.8E-50 T 23-04-2016 LT40_RS10780 87ec5b9d9325b041845d34dcc633b6e7 130 Pfam PF02635 DsrE/DsrF-like family 1 127 6.7E-24 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein LT40_RS10780 87ec5b9d9325b041845d34dcc633b6e7 130 SUPERFAMILY SSF75169 1 127 3.87E-36 T 23-04-2016 IPR027396 DsrEFH-like LT40_RS10780 87ec5b9d9325b041845d34dcc633b6e7 130 PANTHER PTHR34874:SF1 1 129 3.8E-50 T 23-04-2016 LT40_RS10780 87ec5b9d9325b041845d34dcc633b6e7 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 127 4.3E-46 T 23-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 LT40_RS05695 2517176ec39c6e4b5eadab7c6b262fff 253 Gene3D G3DSA:1.10.287.460 24 113 5.0E-26 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LT40_RS05695 2517176ec39c6e4b5eadab7c6b262fff 253 PANTHER PTHR10516:SF320 108 230 7.1E-57 T 23-04-2016 LT40_RS05695 2517176ec39c6e4b5eadab7c6b262fff 253 PANTHER PTHR10516:SF320 72 89 7.1E-57 T 23-04-2016 LT40_RS05695 2517176ec39c6e4b5eadab7c6b262fff 253 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 138 225 6.5E-25 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LT40_RS05695 2517176ec39c6e4b5eadab7c6b262fff 253 Gene3D G3DSA:3.10.50.40 114 228 2.6E-43 T 23-04-2016 LT40_RS05695 2517176ec39c6e4b5eadab7c6b262fff 253 SUPERFAMILY SSF54534 30 228 9.82E-55 T 23-04-2016 LT40_RS05695 2517176ec39c6e4b5eadab7c6b262fff 253 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 21 130 2.6E-29 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LT40_RS05695 2517176ec39c6e4b5eadab7c6b262fff 253 PANTHER PTHR10516 108 230 7.1E-57 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LT40_RS05695 2517176ec39c6e4b5eadab7c6b262fff 253 PANTHER PTHR10516 72 89 7.1E-57 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LT40_RS10465 1c4b814d278dc12ba30af046f24bf127 523 Pfam PF13250 Domain of unknown function (DUF4041) 213 268 1.0E-9 T 23-04-2016 IPR025280 Domain of unknown function DUF4041 LT40_RS10465 1c4b814d278dc12ba30af046f24bf127 523 Pfam PF10544 T5orf172 domain 373 462 8.6E-12 T 23-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding LT40_RS10465 1c4b814d278dc12ba30af046f24bf127 523 SMART SM00974 383 466 1.9E-27 T 23-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding LT40_RS17255 91f10ec19116491124f721af634d0c76 460 Pfam PF02954 Bacterial regulatory protein, Fis family 409 449 1.6E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS17255 91f10ec19116491124f721af634d0c76 460 Pfam PF00158 Sigma-54 interaction domain 152 318 3.0E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS17255 91f10ec19116491124f721af634d0c76 460 SUPERFAMILY SSF52172 10 197 8.4E-41 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS17255 91f10ec19116491124f721af634d0c76 460 SMART SM00448 11 122 4.0E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS17255 91f10ec19116491124f721af634d0c76 460 Pfam PF00072 Response regulator receiver domain 13 122 2.9E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS17255 91f10ec19116491124f721af634d0c76 460 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 238 253 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS17255 91f10ec19116491124f721af634d0c76 460 SMART SM00382 172 315 8.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS17255 91f10ec19116491124f721af634d0c76 460 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 365 374 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS17255 91f10ec19116491124f721af634d0c76 460 PANTHER PTHR32071 1 460 2.9E-252 T 23-04-2016 LT40_RS17255 91f10ec19116491124f721af634d0c76 460 PANTHER PTHR32071:SF40 1 460 2.9E-252 T 23-04-2016 LT40_RS17255 91f10ec19116491124f721af634d0c76 460 Gene3D G3DSA:3.40.50.2300 9 131 7.6E-33 T 23-04-2016 LT40_RS17255 91f10ec19116491124f721af634d0c76 460 Gene3D G3DSA:3.40.50.300 151 324 2.1E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17255 91f10ec19116491124f721af634d0c76 460 Gene3D G3DSA:1.10.8.60 325 373 1.1E-18 T 23-04-2016 LT40_RS17255 91f10ec19116491124f721af634d0c76 460 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 176 189 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS17255 91f10ec19116491124f721af634d0c76 460 SUPERFAMILY SSF52540 152 381 7.64E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17255 91f10ec19116491124f721af634d0c76 460 Gene3D G3DSA:1.10.10.60 374 451 1.2E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS17255 91f10ec19116491124f721af634d0c76 460 SUPERFAMILY SSF46689 400 452 2.27E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS05405 230ab778b3f33585fd52604906f60abc 561 Pfam PF00501 AMP-binding enzyme 30 469 1.4E-108 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LT40_RS05405 230ab778b3f33585fd52604906f60abc 561 Gene3D G3DSA:3.30.300.30 464 560 1.3E-29 T 23-04-2016 LT40_RS05405 230ab778b3f33585fd52604906f60abc 561 Gene3D G3DSA:2.30.38.10 387 460 2.4E-30 T 23-04-2016 LT40_RS05405 230ab778b3f33585fd52604906f60abc 561 Gene3D G3DSA:3.40.50.980 222 386 2.5E-43 T 23-04-2016 LT40_RS05405 230ab778b3f33585fd52604906f60abc 561 Gene3D G3DSA:3.40.50.980 25 138 8.3E-32 T 23-04-2016 LT40_RS05405 230ab778b3f33585fd52604906f60abc 561 Gene3D G3DSA:3.40.50.980 197 221 8.3E-32 T 23-04-2016 LT40_RS05405 230ab778b3f33585fd52604906f60abc 561 Pfam PF13193 AMP-binding enzyme C-terminal domain 478 552 4.5E-18 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LT40_RS05405 230ab778b3f33585fd52604906f60abc 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 23-04-2016 IPR020845 AMP-binding, conserved site LT40_RS05405 230ab778b3f33585fd52604906f60abc 561 PANTHER PTHR24096 177 560 4.4E-168 T 23-04-2016 LT40_RS05405 230ab778b3f33585fd52604906f60abc 561 PANTHER PTHR24096 18 161 4.4E-168 T 23-04-2016 LT40_RS05405 230ab778b3f33585fd52604906f60abc 561 SUPERFAMILY SSF56801 14 560 1.83E-149 T 23-04-2016 LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 Pfam PF00271 Helicase conserved C-terminal domain 232 340 4.3E-28 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 Gene3D G3DSA:3.40.50.300 213 374 3.8E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 SMART SM00490 259 340 5.5E-32 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 SMART SM00487 25 223 2.2E-60 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 Pfam PF00270 DEAD/DEAH box helicase 31 195 5.5E-48 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 553 41.622 T 23-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 PANTHER PTHR24031:SF261 509 556 1.8E-195 T 23-04-2016 LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 PANTHER PTHR24031:SF261 8 479 1.8E-195 T 23-04-2016 LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 SUPERFAMILY SSF52540 74 361 5.4E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 PANTHER PTHR24031 509 556 1.8E-195 T 23-04-2016 LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 PANTHER PTHR24031 8 479 1.8E-195 T 23-04-2016 LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 Pfam PF03880 DbpA RNA binding domain 483 551 8.9E-18 T 23-04-2016 IPR005580 DbpA, RNA-binding domain LT40_RS05905 d823b5dc95e1a945a08ecc11e33c9ac7 556 Gene3D G3DSA:3.40.50.300 3 212 1.4E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 SUPERFAMILY SSF54862 82 213 4.6E-33 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 Pfam PF00384 Molybdopterin oxidoreductase 560 634 5.1E-11 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 SMART SM00926 221 275 4.1E-11 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 Gene3D G3DSA:2.20.25.90 227 275 5.2E-14 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 127 6.6E-15 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 PANTHER PTHR11615 493 686 0.0 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 PANTHER PTHR11615 361 427 0.0 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 PANTHER PTHR11615 733 902 0.0 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 PANTHER PTHR11615 3 317 0.0 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 SUPERFAMILY SSF53706 219 686 1.12E-82 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 SUPERFAMILY SSF54292 1 77 2.51E-18 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 Gene3D G3DSA:2.40.40.20 818 885 7.1E-4 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 Gene3D G3DSA:3.40.50.740 501 683 1.6E-35 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 Gene3D G3DSA:3.40.50.740 279 337 1.6E-35 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 2.9E-11 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 652 1.4E-214 T 23-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 Gene3D G3DSA:3.30.70.20 147 157 5.3E-5 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 Gene3D G3DSA:3.30.70.20 198 226 5.3E-5 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 SMART SM00929 88 128 2.6E-19 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 SUPERFAMILY SSF50692 812 887 7.46E-7 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 Gene3D G3DSA:3.10.20.30 3 85 7.6E-8 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 PANTHER PTHR11615:SF134 493 686 0.0 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 PANTHER PTHR11615:SF134 361 427 0.0 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 PANTHER PTHR11615:SF134 733 902 0.0 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 PANTHER PTHR11615:SF134 3 317 0.0 T 23-04-2016 LT40_RS11380 f2365ae7585c6cfa1b762bf223a97212 905 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 75 6.3E-10 T 23-04-2016 LT40_RS19305 03a8d3d0489510f2a7e0a5ba0602fa2f 150 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 29.407 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LT40_RS19305 03a8d3d0489510f2a7e0a5ba0602fa2f 150 PANTHER PTHR30266:SF2 1 144 5.6E-58 T 23-04-2016 LT40_RS19305 03a8d3d0489510f2a7e0a5ba0602fa2f 150 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 7.7E-13 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LT40_RS19305 03a8d3d0489510f2a7e0a5ba0602fa2f 150 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 7.7E-13 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LT40_RS19305 03a8d3d0489510f2a7e0a5ba0602fa2f 150 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 7.7E-13 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LT40_RS19305 03a8d3d0489510f2a7e0a5ba0602fa2f 150 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 131 6.3E-45 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LT40_RS19305 03a8d3d0489510f2a7e0a5ba0602fa2f 150 PANTHER PTHR30266 1 144 5.6E-58 T 23-04-2016 LT40_RS19305 03a8d3d0489510f2a7e0a5ba0602fa2f 150 SUPERFAMILY SSF81330 13 127 1.83E-35 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LT40_RS19305 03a8d3d0489510f2a7e0a5ba0602fa2f 150 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 23-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site LT40_RS19305 03a8d3d0489510f2a7e0a5ba0602fa2f 150 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 4 133 2.8E-49 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LT40_RS04020 deb119cab50ef98a0200077579749318 97 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 13 95 3.2E-25 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LT40_RS04020 deb119cab50ef98a0200077579749318 97 PANTHER PTHR37479:SF1 1 97 1.1E-33 T 23-04-2016 LT40_RS04020 deb119cab50ef98a0200077579749318 97 Hamap MF_00910 Cell division protein FtsL [ftsL]. 12 95 15.473 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LT40_RS04020 deb119cab50ef98a0200077579749318 97 PANTHER PTHR37479 1 97 1.1E-33 T 23-04-2016 LT40_RS04020 deb119cab50ef98a0200077579749318 97 Pfam PF04999 Cell division protein FtsL 1 96 3.2E-32 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LT40_RS06215 00697d2764f7dd9db49e9261bf941aca 296 PIRSF PIRSF006278 1 296 1.5E-73 T 23-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase LT40_RS06215 00697d2764f7dd9db49e9261bf941aca 296 Gene3D G3DSA:3.40.50.1100 95 294 1.6E-41 T 23-04-2016 LT40_RS06215 00697d2764f7dd9db49e9261bf941aca 296 Gene3D G3DSA:3.40.50.1100 56 94 7.5E-5 T 23-04-2016 LT40_RS06215 00697d2764f7dd9db49e9261bf941aca 296 PANTHER PTHR10314:SF79 9 292 5.2E-12 T 23-04-2016 LT40_RS06215 00697d2764f7dd9db49e9261bf941aca 296 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 287 2.8E-12 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS06215 00697d2764f7dd9db49e9261bf941aca 296 PANTHER PTHR10314 9 292 5.2E-12 T 23-04-2016 LT40_RS06215 00697d2764f7dd9db49e9261bf941aca 296 SUPERFAMILY SSF53686 9 294 6.06E-56 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS19240 ee5190cd4e3c77ceed02f0c01b4ad258 361 Gene3D G3DSA:3.40.50.150 151 360 1.4E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS19240 ee5190cd4e3c77ceed02f0c01b4ad258 361 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 3 361 41.196 T 23-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 LT40_RS19240 ee5190cd4e3c77ceed02f0c01b4ad258 361 PANTHER PTHR11061 8 361 5.3E-184 T 23-04-2016 LT40_RS19240 ee5190cd4e3c77ceed02f0c01b4ad258 361 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 343 353 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site LT40_RS19240 ee5190cd4e3c77ceed02f0c01b4ad258 361 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 294 323 - T 23-04-2016 IPR030390 RNA methyltransferase TrmA, active site LT40_RS19240 ee5190cd4e3c77ceed02f0c01b4ad258 361 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 361 6.4E-175 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LT40_RS19240 ee5190cd4e3c77ceed02f0c01b4ad258 361 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 9 361 6.2E-176 T 23-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 LT40_RS19240 ee5190cd4e3c77ceed02f0c01b4ad258 361 PANTHER PTHR11061:SF25 8 361 5.3E-184 T 23-04-2016 LT40_RS19240 ee5190cd4e3c77ceed02f0c01b4ad258 361 SUPERFAMILY SSF53335 9 360 4.55E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14170 80a86df03cb59e2c56cbade60a62be7f 416 PANTHER PTHR13847 11 403 7.3E-67 T 23-04-2016 LT40_RS14170 80a86df03cb59e2c56cbade60a62be7f 416 Gene3D G3DSA:3.50.50.60 18 111 2.7E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14170 80a86df03cb59e2c56cbade60a62be7f 416 Gene3D G3DSA:3.50.50.60 175 253 2.7E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14170 80a86df03cb59e2c56cbade60a62be7f 416 Gene3D G3DSA:3.50.50.60 344 402 2.7E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14170 80a86df03cb59e2c56cbade60a62be7f 416 PANTHER PTHR13847:SF44 11 403 7.3E-67 T 23-04-2016 LT40_RS14170 80a86df03cb59e2c56cbade60a62be7f 416 SUPERFAMILY SSF51905 33 254 3.24E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14170 80a86df03cb59e2c56cbade60a62be7f 416 SUPERFAMILY SSF51905 344 402 3.24E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14170 80a86df03cb59e2c56cbade60a62be7f 416 TIGRFAM TIGR01373 soxB: sarcosine oxidase, beta subunit family 3 408 6.3E-228 T 23-04-2016 IPR006278 Sarcosine oxidase subunit beta GO:0008115|GO:0046653|GO:0055114 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 LT40_RS14170 80a86df03cb59e2c56cbade60a62be7f 416 Gene3D G3DSA:3.30.9.10 116 174 8.1E-11 T 23-04-2016 LT40_RS14170 80a86df03cb59e2c56cbade60a62be7f 416 Gene3D G3DSA:3.30.9.10 254 343 8.1E-11 T 23-04-2016 LT40_RS14170 80a86df03cb59e2c56cbade60a62be7f 416 Pfam PF01266 FAD dependent oxidoreductase 34 380 2.7E-53 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS00445 6e5bfc930b157cb732e46fb449d7c451 449 Gene3D G3DSA:2.30.42.10 223 289 7.0E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS00445 6e5bfc930b157cb732e46fb449d7c451 449 Gene3D G3DSA:2.30.42.10 95 192 7.9E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS00445 6e5bfc930b157cb732e46fb449d7c451 449 PANTHER PTHR22939 199 449 1.6E-84 T 23-04-2016 LT40_RS00445 6e5bfc930b157cb732e46fb449d7c451 449 PANTHER PTHR22939:SF78 199 449 1.6E-84 T 23-04-2016 LT40_RS00445 6e5bfc930b157cb732e46fb449d7c451 449 Pfam PF13180 PDZ domain 227 289 6.1E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS00445 6e5bfc930b157cb732e46fb449d7c451 449 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 449 5.1E-124 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 LT40_RS00445 6e5bfc930b157cb732e46fb449d7c451 449 SUPERFAMILY SSF50156 208 287 1.09E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS00445 6e5bfc930b157cb732e46fb449d7c451 449 SMART SM00228 114 186 1.6E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS00445 6e5bfc930b157cb732e46fb449d7c451 449 SMART SM00228 211 280 8.2E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS00445 6e5bfc930b157cb732e46fb449d7c451 449 Pfam PF02163 Peptidase family M50 11 436 4.0E-84 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 LT40_RS00445 6e5bfc930b157cb732e46fb449d7c451 449 SUPERFAMILY SSF50156 87 190 7.23E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 135 287 4.5E-7 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 SUPERFAMILY SSF52922 694 879 1.74E-60 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 Gene3D G3DSA:3.40.50.970 51 459 5.6E-150 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 PANTHER PTHR11624:SF72 356 447 0.0 T 23-04-2016 LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 PANTHER PTHR11624:SF72 779 863 0.0 T 23-04-2016 LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 PANTHER PTHR11624:SF72 545 760 0.0 T 23-04-2016 LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 PANTHER PTHR11624:SF72 464 527 0.0 T 23-04-2016 LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 PANTHER PTHR11624:SF72 69 288 0.0 T 23-04-2016 LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 Gene3D G3DSA:3.40.50.920 698 879 2.9E-78 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 PANTHER PTHR11624 356 447 0.0 T 23-04-2016 IPR033247 Transketolase family LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 PANTHER PTHR11624 779 863 0.0 T 23-04-2016 IPR033247 Transketolase family LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 PANTHER PTHR11624 545 760 0.0 T 23-04-2016 IPR033247 Transketolase family LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 PANTHER PTHR11624 464 527 0.0 T 23-04-2016 IPR033247 Transketolase family LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 PANTHER PTHR11624 69 288 0.0 T 23-04-2016 IPR033247 Transketolase family LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 2 879 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 SUPERFAMILY SSF52518 52 459 4.29E-133 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 SUPERFAMILY SSF52518 465 692 8.01E-96 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 Gene3D G3DSA:3.40.50.970 465 696 6.8E-119 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS17660 a33fb9a0db169eda88db514e8aa5a34e 881 PIRSF PIRSF000156 1 881 0.0 T 23-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 LT40_RS14325 e84852b30c293d81a748b90a778857df 86 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 6.0E-22 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 LT40_RS14325 e84852b30c293d81a748b90a778857df 86 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 85 22.447 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 LT40_RS14325 e84852b30c293d81a748b90a778857df 86 Pfam PF02416 mttA/Hcf106 family 6 48 1.9E-13 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 LT40_RS14325 e84852b30c293d81a748b90a778857df 86 PANTHER PTHR33162 1 54 1.1E-15 T 23-04-2016 LT40_RS13470 a9f5e05e584a729833ddc06970742307 106 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 69 86 4.4E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS13470 a9f5e05e584a729833ddc06970742307 106 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 86 106 4.4E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS13470 a9f5e05e584a729833ddc06970742307 106 Pfam PF02954 Bacterial regulatory protein, Fis family 63 103 8.9E-14 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS13470 a9f5e05e584a729833ddc06970742307 106 SUPERFAMILY SSF46689 27 105 1.08E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS13470 a9f5e05e584a729833ddc06970742307 106 Gene3D G3DSA:1.10.10.60 35 105 4.2E-24 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS13470 a9f5e05e584a729833ddc06970742307 106 PANTHER PTHR32071 28 105 3.0E-20 T 23-04-2016 LT40_RS13470 a9f5e05e584a729833ddc06970742307 106 PRINTS PR01591 DNA-binding protein FIS signature 65 77 2.5E-11 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LT40_RS13470 a9f5e05e584a729833ddc06970742307 106 PRINTS PR01591 DNA-binding protein FIS signature 50 65 2.5E-11 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LT40_RS13470 a9f5e05e584a729833ddc06970742307 106 PRINTS PR01591 DNA-binding protein FIS signature 34 50 2.5E-11 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LT40_RS13470 a9f5e05e584a729833ddc06970742307 106 PIRSF PIRSF002097 8 106 4.2E-40 T 23-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 LT40_RS06250 f3ede4f6f1fc86a022c7f5d1a217f03c 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 150 396 3.3E-21 T 23-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal LT40_RS06250 f3ede4f6f1fc86a022c7f5d1a217f03c 414 Gene3D G3DSA:3.40.50.720 3 199 7.7E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06250 f3ede4f6f1fc86a022c7f5d1a217f03c 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 146 4.2E-32 T 23-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 LT40_RS06250 f3ede4f6f1fc86a022c7f5d1a217f03c 414 PANTHER PTHR12286 1 410 6.9E-99 T 23-04-2016 LT40_RS06250 f3ede4f6f1fc86a022c7f5d1a217f03c 414 SUPERFAMILY SSF51735 2 162 2.06E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06250 f3ede4f6f1fc86a022c7f5d1a217f03c 414 PANTHER PTHR12286:SF6 1 410 6.9E-99 T 23-04-2016 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 588 608 9.9E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 571 588 9.9E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 Pfam PF06506 Propionate catabolism activator 10 173 5.0E-27 T 23-04-2016 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 SMART SM00382 330 479 1.4E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 SUPERFAMILY SSF159800 4 170 6.54E-25 T 23-04-2016 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 SUPERFAMILY SSF52540 310 550 1.17E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 520 529 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 Gene3D G3DSA:3.40.50.10660 71 150 2.1E-5 T 23-04-2016 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 SUPERFAMILY SSF55785 187 277 8.11E-6 T 23-04-2016 IPR000014 PAS domain LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 PANTHER PTHR32071 280 619 1.8E-128 T 23-04-2016 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 PANTHER PTHR32071 139 200 1.8E-128 T 23-04-2016 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 Gene3D G3DSA:3.40.50.2300 11 70 1.3E-9 T 23-04-2016 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 Gene3D G3DSA:1.10.8.60 484 553 2.8E-16 T 23-04-2016 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 Pfam PF02954 Bacterial regulatory protein, Fis family 569 605 8.8E-12 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 Gene3D G3DSA:3.40.50.300 307 483 2.1E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 397 412 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 Gene3D G3DSA:1.10.10.60 554 605 8.4E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 SUPERFAMILY SSF46689 563 606 8.51E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 Gene3D G3DSA:3.30.450.20 186 281 1.9E-5 T 23-04-2016 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 Pfam PF00158 Sigma-54 interaction domain 310 477 3.4E-61 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS10635 6c286e465a53cda33b586b5cf0e197fb 628 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 334 347 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 Pfam PF00308 Bacterial dnaA protein 167 384 1.0E-100 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 Pfam PF11638 DnaA N-terminal domain 4 63 4.9E-21 T 23-04-2016 IPR024633 DnaA N-terminal domain LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 ProSitePatterns PS01008 DnaA protein signature. 460 479 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 SUPERFAMILY SSF48295 398 500 8.37E-37 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 SMART SM00382 199 404 4.1E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 PANTHER PTHR30050:SF2 1 102 5.8E-232 T 23-04-2016 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 298 325 5.3E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 278 5.3E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 200 220 5.3E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 232 246 5.3E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 460 479 5.3E-53 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 PANTHER PTHR30050 165 502 5.8E-232 T 23-04-2016 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 Gene3D G3DSA:1.10.1750.10 401 501 8.1E-41 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 SUPERFAMILY SSF52540 168 378 2.63E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 PANTHER PTHR30050 1 102 5.8E-232 T 23-04-2016 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 Gene3D G3DSA:3.40.50.300 160 331 1.8E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 501 34.209 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 500 1.1E-190 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 Gene3D G3DSA:1.10.8.60 333 400 1.9E-29 T 23-04-2016 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 SMART SM00760 410 479 5.3E-44 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 PANTHER PTHR30050:SF2 165 502 5.8E-232 T 23-04-2016 LT40_RS16045 1c2a7b960fd93ecdfa1be414477e5769 502 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 411 479 7.6E-32 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LT40_RS12280 410a46bc73e364b4a020182e190d316a 189 Pfam PF13420 Acetyltransferase (GNAT) domain 4 145 4.3E-8 T 23-04-2016 LT40_RS12280 410a46bc73e364b4a020182e190d316a 189 SUPERFAMILY SSF55729 1 162 4.53E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS12280 410a46bc73e364b4a020182e190d316a 189 Gene3D G3DSA:3.40.630.30 2 167 3.7E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS12280 410a46bc73e364b4a020182e190d316a 189 PANTHER PTHR23091 1 165 1.7E-31 T 23-04-2016 LT40_RS12280 410a46bc73e364b4a020182e190d316a 189 PANTHER PTHR23091:SF210 1 165 1.7E-31 T 23-04-2016 LT40_RS04070 8f5574026e134ae94be3176facc311d1 289 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 43 272 23.156 T 23-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 LT40_RS04070 8f5574026e134ae94be3176facc311d1 289 PANTHER PTHR35851 1 289 4.0E-67 T 23-04-2016 LT40_RS04070 8f5574026e134ae94be3176facc311d1 289 PANTHER PTHR35851:SF1 1 289 4.0E-67 T 23-04-2016 LT40_RS04070 8f5574026e134ae94be3176facc311d1 289 Pfam PF03799 Cell division protein FtsQ 146 264 5.0E-20 T 23-04-2016 IPR005548 Cell division protein FtsQ/DivIB LT40_RS04070 8f5574026e134ae94be3176facc311d1 289 Pfam PF08478 POTRA domain, FtsQ-type 74 142 1.5E-19 T 23-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type LT40_RS01310 47a3f587d99f558da56005eff7604867 173 Gene3D G3DSA:1.25.40.20 25 168 1.3E-35 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain LT40_RS01310 47a3f587d99f558da56005eff7604867 173 SUPERFAMILY SSF48403 25 169 1.7E-34 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain LT40_RS01310 47a3f587d99f558da56005eff7604867 173 Pfam PF13637 Ankyrin repeats (many copies) 116 157 6.3E-8 T 23-04-2016 LT40_RS01310 47a3f587d99f558da56005eff7604867 173 SMART SM00248 16 45 1600.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 LT40_RS01310 47a3f587d99f558da56005eff7604867 173 SMART SM00248 115 144 2.5E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 LT40_RS01310 47a3f587d99f558da56005eff7604867 173 SMART SM00248 49 78 0.0044 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 LT40_RS01310 47a3f587d99f558da56005eff7604867 173 SMART SM00248 82 111 170.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 LT40_RS01310 47a3f587d99f558da56005eff7604867 173 PANTHER PTHR24198 25 170 1.9E-33 T 23-04-2016 LT40_RS01310 47a3f587d99f558da56005eff7604867 173 Pfam PF12796 Ankyrin repeats (3 copies) 24 108 4.2E-11 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain LT40_RS16215 a7aab43ac9f159389e4fce22c70b5f2a 321 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 159 2.7E-34 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LT40_RS16215 a7aab43ac9f159389e4fce22c70b5f2a 321 PANTHER PTHR13748 1 157 4.5E-40 T 23-04-2016 LT40_RS16215 a7aab43ac9f159389e4fce22c70b5f2a 321 SUPERFAMILY SSF52540 4 158 9.1E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16215 a7aab43ac9f159389e4fce22c70b5f2a 321 Gene3D G3DSA:3.40.50.300 4 185 8.8E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16625 1c3a01026552d5095ab1e21af0fbed52 190 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 40.837 T 23-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 LT40_RS16625 1c3a01026552d5095ab1e21af0fbed52 190 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 189 1.1E-88 T 23-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 LT40_RS16625 1c3a01026552d5095ab1e21af0fbed52 190 PANTHER PTHR11776 2 188 8.3E-84 T 23-04-2016 LT40_RS16625 1c3a01026552d5095ab1e21af0fbed52 190 Gene3D G3DSA:3.40.50.2020 2 188 1.8E-65 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS16625 1c3a01026552d5095ab1e21af0fbed52 190 PANTHER PTHR11776:SF1 2 188 8.3E-84 T 23-04-2016 LT40_RS16625 1c3a01026552d5095ab1e21af0fbed52 190 SUPERFAMILY SSF53271 2 188 1.75E-46 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 Gene3D G3DSA:1.10.1670.10 123 208 4.4E-35 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 SMART SM00525 186 206 9.7E-5 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.4E-85 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 PIRSF PIRSF001435 1 212 1.4E-52 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 5.9E-20 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 SUPERFAMILY SSF48150 3 208 1.29E-72 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 PANTHER PTHR10359:SF18 1 212 8.9E-91 T 23-04-2016 LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 Gene3D G3DSA:1.10.340.30 23 122 4.1E-34 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 PANTHER PTHR10359 1 212 8.9E-91 T 23-04-2016 LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.616 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 SMART SM00478 38 185 7.4E-56 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LT40_RS05380 f6a292d2d8055e6cd008f7c16cd37303 212 Pfam PF00633 Helix-hairpin-helix motif 99 127 1.6E-9 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 LT40_RS12160 288c4de30192cfa29912709e5ce5752f 178 Pfam PF08281 Sigma-70, region 4 122 173 3.1E-15 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS12160 288c4de30192cfa29912709e5ce5752f 178 PANTHER PTHR30173 1 177 4.4E-41 T 23-04-2016 LT40_RS12160 288c4de30192cfa29912709e5ce5752f 178 SUPERFAMILY SSF88946 6 114 2.86E-25 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS12160 288c4de30192cfa29912709e5ce5752f 178 Pfam PF04542 Sigma-70 region 2 28 96 4.4E-19 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS12160 288c4de30192cfa29912709e5ce5752f 178 Gene3D G3DSA:1.10.1740.10 14 115 1.9E-25 T 23-04-2016 LT40_RS12160 288c4de30192cfa29912709e5ce5752f 178 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 177 2.5E-24 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS12160 288c4de30192cfa29912709e5ce5752f 178 SUPERFAMILY SSF88659 121 177 6.17E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS12160 288c4de30192cfa29912709e5ce5752f 178 Gene3D G3DSA:1.10.10.10 122 177 3.4E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17470 5a4716f14db59a0a7e94c90cda74f755 321 PANTHER PTHR23309 1 315 3.5E-98 T 23-04-2016 LT40_RS17470 5a4716f14db59a0a7e94c90cda74f755 321 Hamap MF_02129 L-carnitine dehydrogenase [lcdH]. 8 318 53.952 T 23-04-2016 IPR026578 L-carnitine dehydrogenase KEGG: 00040+1.1.1.10|MetaCyc: PWY-3602|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7472|UniPathway: UPA00117 LT40_RS17470 5a4716f14db59a0a7e94c90cda74f755 321 Gene3D G3DSA:3.40.50.720 10 189 2.9E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17470 5a4716f14db59a0a7e94c90cda74f755 321 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 256 1.1E-14 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LT40_RS17470 5a4716f14db59a0a7e94c90cda74f755 321 SUPERFAMILY SSF48179 188 276 1.02E-15 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS17470 5a4716f14db59a0a7e94c90cda74f755 321 SUPERFAMILY SSF51735 7 185 4.24E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17470 5a4716f14db59a0a7e94c90cda74f755 321 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 11 184 2.5E-41 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LT40_RS17470 5a4716f14db59a0a7e94c90cda74f755 321 Gene3D G3DSA:1.10.1040.10 190 258 1.5E-9 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS17470 5a4716f14db59a0a7e94c90cda74f755 321 PANTHER PTHR23309:SF17 1 315 3.5E-98 T 23-04-2016 LT40_RS17945 450ed973f595f434de79388a907c8d3e 260 PANTHER PTHR23088 1 260 6.9E-73 T 23-04-2016 LT40_RS17945 450ed973f595f434de79388a907c8d3e 260 SUPERFAMILY SSF56317 1 260 7.19E-73 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS17945 450ed973f595f434de79388a907c8d3e 260 Gene3D G3DSA:3.60.110.10 1 260 9.2E-78 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS17945 450ed973f595f434de79388a907c8d3e 260 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 142 162 - T 23-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site LT40_RS17945 450ed973f595f434de79388a907c8d3e 260 PANTHER PTHR23088:SF27 1 260 6.9E-73 T 23-04-2016 LT40_RS17945 450ed973f595f434de79388a907c8d3e 260 Pfam PF00795 Carbon-nitrogen hydrolase 2 246 1.9E-51 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS08240 42e8b92de4b3847e24d42b8d6f0798a3 408 PANTHER PTHR23501 13 398 6.8E-85 T 23-04-2016 LT40_RS08240 42e8b92de4b3847e24d42b8d6f0798a3 408 Gene3D G3DSA:1.20.1250.20 219 397 2.5E-14 T 23-04-2016 LT40_RS08240 42e8b92de4b3847e24d42b8d6f0798a3 408 Gene3D G3DSA:1.20.1250.20 26 207 6.2E-24 T 23-04-2016 LT40_RS08240 42e8b92de4b3847e24d42b8d6f0798a3 408 SUPERFAMILY SSF103473 15 400 3.01E-52 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS08240 42e8b92de4b3847e24d42b8d6f0798a3 408 Pfam PF07690 Major Facilitator Superfamily 30 341 3.6E-31 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS08240 42e8b92de4b3847e24d42b8d6f0798a3 408 PANTHER PTHR23501:SF4 13 398 6.8E-85 T 23-04-2016 LT40_RS19405 f50df832932fde7d60ef1021b63cf451 322 Pfam PF00348 Polyprenyl synthetase 31 271 1.8E-71 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LT40_RS19405 f50df832932fde7d60ef1021b63cf451 322 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LT40_RS19405 f50df832932fde7d60ef1021b63cf451 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LT40_RS19405 f50df832932fde7d60ef1021b63cf451 322 PANTHER PTHR12001:SF47 10 322 2.6E-114 T 23-04-2016 LT40_RS19405 f50df832932fde7d60ef1021b63cf451 322 PANTHER PTHR12001 10 322 2.6E-114 T 23-04-2016 IPR017446 Polyprenyl synthetase-related LT40_RS19405 f50df832932fde7d60ef1021b63cf451 322 Gene3D G3DSA:1.10.600.10 4 321 9.2E-102 T 23-04-2016 IPR008949 Isoprenoid synthase domain LT40_RS19405 f50df832932fde7d60ef1021b63cf451 322 SUPERFAMILY SSF48576 6 321 9.07E-99 T 23-04-2016 IPR008949 Isoprenoid synthase domain LT40_RS13165 fc3998c2679250684c18007cba29e397 193 Pfam PF02525 Flavodoxin-like fold 2 188 1.1E-32 T 23-04-2016 IPR003680 Flavodoxin-like fold LT40_RS13165 fc3998c2679250684c18007cba29e397 193 PANTHER PTHR10204:SF36 1 192 5.2E-119 T 23-04-2016 LT40_RS13165 fc3998c2679250684c18007cba29e397 193 SUPERFAMILY SSF52218 1 192 2.43E-39 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS13165 fc3998c2679250684c18007cba29e397 193 PANTHER PTHR10204 1 192 5.2E-119 T 23-04-2016 LT40_RS13165 fc3998c2679250684c18007cba29e397 193 Gene3D G3DSA:3.40.50.360 1 191 2.7E-41 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS06715 824ee53916e02b4c90fad3b86105c732 351 PANTHER PTHR21712:SF4 7 349 4.8E-117 T 23-04-2016 LT40_RS06715 824ee53916e02b4c90fad3b86105c732 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 346 6.5E-129 T 23-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 LT40_RS06715 824ee53916e02b4c90fad3b86105c732 351 SUPERFAMILY SSF52733 5 346 1.96E-113 T 23-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 LT40_RS06715 824ee53916e02b4c90fad3b86105c732 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 348 35.333 T 23-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 LT40_RS06715 824ee53916e02b4c90fad3b86105c732 351 PANTHER PTHR21712 7 349 4.8E-117 T 23-04-2016 LT40_RS06715 824ee53916e02b4c90fad3b86105c732 351 Pfam PF02277 Phosphoribosyltransferase 12 346 8.1E-126 T 23-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 LT40_RS06715 824ee53916e02b4c90fad3b86105c732 351 Gene3D G3DSA:3.40.50.10210 72 329 1.6E-103 T 23-04-2016 LT40_RS06715 824ee53916e02b4c90fad3b86105c732 351 Gene3D G3DSA:1.10.1610.10 4 71 1.1E-30 T 23-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 LT40_RS06230 664041e4c513d392fea28afdbc9abd71 297 SUPERFAMILY SSF111331 6 289 2.22E-90 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain LT40_RS06230 664041e4c513d392fea28afdbc9abd71 297 Gene3D G3DSA:2.60.200.30 150 261 8.5E-44 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LT40_RS06230 664041e4c513d392fea28afdbc9abd71 297 PANTHER PTHR20275 4 291 1.4E-103 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LT40_RS06230 664041e4c513d392fea28afdbc9abd71 297 Pfam PF01513 ATP-NAD kinase 6 271 2.4E-67 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LT40_RS06230 664041e4c513d392fea28afdbc9abd71 297 Gene3D G3DSA:3.40.50.10330 3 149 1.4E-41 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LT40_RS06230 664041e4c513d392fea28afdbc9abd71 297 Hamap MF_00361 NAD kinase [nadK]. 5 287 34.275 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LT40_RS11415 f4a8b0a9d4f92c7b7958ebbdb17ae9a9 494 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 477 17.649 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 LT40_RS11415 f4a8b0a9d4f92c7b7958ebbdb17ae9a9 494 PANTHER PTHR22773:SF41 1 483 4.8E-170 T 23-04-2016 LT40_RS11415 f4a8b0a9d4f92c7b7958ebbdb17ae9a9 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 217 238 1.0E-5 T 23-04-2016 LT40_RS11415 f4a8b0a9d4f92c7b7958ebbdb17ae9a9 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 70 95 1.0E-5 T 23-04-2016 LT40_RS11415 f4a8b0a9d4f92c7b7958ebbdb17ae9a9 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 416 435 1.0E-5 T 23-04-2016 LT40_RS11415 f4a8b0a9d4f92c7b7958ebbdb17ae9a9 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 1.0E-5 T 23-04-2016 LT40_RS11415 f4a8b0a9d4f92c7b7958ebbdb17ae9a9 494 Pfam PF00361 Proton-conducting membrane transporter 126 422 1.2E-76 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 LT40_RS11415 f4a8b0a9d4f92c7b7958ebbdb17ae9a9 494 PANTHER PTHR22773 1 483 4.8E-170 T 23-04-2016 LT40_RS11415 f4a8b0a9d4f92c7b7958ebbdb17ae9a9 494 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 8 476 2.6E-125 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 SUPERFAMILY SSF47226 8 101 1.01E-21 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 SUPERFAMILY SSF50341 484 616 2.49E-22 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 SUPERFAMILY SSF55874 301 483 5.89E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 Gene3D G3DSA:3.30.565.10 311 484 3.3E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 484 1.0E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 SMART SM00448 643 757 1.4E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 SMART SM00387 342 485 1.1E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 SUPERFAMILY SSF52172 642 762 5.55E-32 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 Pfam PF00072 Response regulator receiver domain 645 756 2.2E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 Gene3D G3DSA:3.40.50.2300 641 762 2.1E-33 T 23-04-2016 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 SMART SM00073 8 105 5.3E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 9.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 482 9.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 463 9.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 Pfam PF01584 CheW-like domain 491 620 8.2E-16 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 PANTHER PTHR22617:SF6 121 236 2.5E-125 T 23-04-2016 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 PANTHER PTHR22617:SF6 275 632 2.5E-125 T 23-04-2016 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 SMART SM00260 477 616 6.0E-12 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 Pfam PF01627 Hpt domain 11 95 7.5E-13 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 PANTHER PTHR22617 121 236 2.5E-125 T 23-04-2016 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 PANTHER PTHR22617 275 632 2.5E-125 T 23-04-2016 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 Gene3D G3DSA:1.20.120.160 6 145 1.6E-30 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 Gene3D G3DSA:2.30.30.40 571 615 2.1E-12 T 23-04-2016 LT40_RS20455 11fbebe29f3103ab1ce069bf080ae1da 766 Gene3D G3DSA:2.30.30.40 485 506 2.1E-12 T 23-04-2016 LT40_RS08650 d376eb436e8847b962da76b6738c772b 71 Gene3D G3DSA:1.10.260.40 5 66 4.2E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS08650 d376eb436e8847b962da76b6738c772b 71 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 7 68 1.5E-9 T 23-04-2016 IPR031856 Putative bacterial antitoxin YdaS LT40_RS08650 d376eb436e8847b962da76b6738c772b 71 SUPERFAMILY SSF47413 5 66 2.18E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS20290 0b137badb344dd31c9025866d99b8e79 1517 SMART SM00912 36 161 3.6E-22 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS20290 0b137badb344dd31c9025866d99b8e79 1517 SUPERFAMILY SSF51126 30 310 2.95E-32 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor LT40_RS20290 0b137badb344dd31c9025866d99b8e79 1517 PANTHER PTHR32093 2 166 1.8E-30 T 23-04-2016 LT40_RS20290 0b137badb344dd31c9025866d99b8e79 1517 Gene3D G3DSA:2.160.20.10 27 309 2.9E-51 T 23-04-2016 IPR012334 Pectin lyase fold LT40_RS20290 0b137badb344dd31c9025866d99b8e79 1517 Pfam PF05860 haemagglutination activity domain 35 141 3.8E-21 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS20290 0b137badb344dd31c9025866d99b8e79 1517 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 54 142 2.8E-9 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS20290 0b137badb344dd31c9025866d99b8e79 1517 Pfam PF13332 Haemagluttinin repeat 915 1049 5.1E-5 T 23-04-2016 IPR025157 Haemagluttinin repeat LT40_RS20290 0b137badb344dd31c9025866d99b8e79 1517 Pfam PF13332 Haemagluttinin repeat 1206 1347 9.9E-14 T 23-04-2016 IPR025157 Haemagluttinin repeat LT40_RS20290 0b137badb344dd31c9025866d99b8e79 1517 Pfam PF13332 Haemagluttinin repeat 589 686 6.8E-7 T 23-04-2016 IPR025157 Haemagluttinin repeat LT40_RS20290 0b137badb344dd31c9025866d99b8e79 1517 Pfam PF13332 Haemagluttinin repeat 367 423 0.01 T 23-04-2016 IPR025157 Haemagluttinin repeat LT40_RS20290 0b137badb344dd31c9025866d99b8e79 1517 Pfam PF13332 Haemagluttinin repeat 694 844 2.8E-12 T 23-04-2016 IPR025157 Haemagluttinin repeat LT40_RS06345 58f2f850c0d0273d9efb7aabd80f87a3 387 PANTHER PTHR10909:SF285 7 387 6.6E-273 T 23-04-2016 LT40_RS06345 58f2f850c0d0273d9efb7aabd80f87a3 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 LT40_RS06345 58f2f850c0d0273d9efb7aabd80f87a3 387 SUPERFAMILY SSF47203 230 385 1.61E-43 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS06345 58f2f850c0d0273d9efb7aabd80f87a3 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 232 365 1.4E-34 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS06345 58f2f850c0d0273d9efb7aabd80f87a3 387 Gene3D G3DSA:2.40.110.10 121 221 1.6E-30 T 23-04-2016 LT40_RS06345 58f2f850c0d0273d9efb7aabd80f87a3 387 SUPERFAMILY SSF56645 1 231 1.07E-59 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS06345 58f2f850c0d0273d9efb7aabd80f87a3 387 PANTHER PTHR10909 7 387 6.6E-273 T 23-04-2016 LT40_RS06345 58f2f850c0d0273d9efb7aabd80f87a3 387 Gene3D G3DSA:1.10.540.10 3 117 9.4E-30 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS06345 58f2f850c0d0273d9efb7aabd80f87a3 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 116 1.3E-24 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS06345 58f2f850c0d0273d9efb7aabd80f87a3 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 219 7.6E-22 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LT40_RS06345 58f2f850c0d0273d9efb7aabd80f87a3 387 Gene3D G3DSA:1.20.140.10 222 386 2.7E-53 T 23-04-2016 LT40_RS03305 7c13dd644e6b4e61b6513360e2e31482 299 PIRSF PIRSF002867 1 294 1.8E-84 T 23-04-2016 IPR024181 Chemotaxis response regulator CheV LT40_RS03305 7c13dd644e6b4e61b6513360e2e31482 299 PANTHER PTHR22617:SF37 11 160 1.2E-39 T 23-04-2016 LT40_RS03305 7c13dd644e6b4e61b6513360e2e31482 299 PANTHER PTHR22617 11 160 1.2E-39 T 23-04-2016 LT40_RS03305 7c13dd644e6b4e61b6513360e2e31482 299 Gene3D G3DSA:2.30.30.40 83 135 3.1E-4 T 23-04-2016 LT40_RS03305 7c13dd644e6b4e61b6513360e2e31482 299 SUPERFAMILY SSF52172 169 293 1.38E-22 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS03305 7c13dd644e6b4e61b6513360e2e31482 299 Pfam PF01584 CheW-like domain 13 145 1.9E-32 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS03305 7c13dd644e6b4e61b6513360e2e31482 299 SUPERFAMILY SSF50341 9 147 8.89E-31 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS03305 7c13dd644e6b4e61b6513360e2e31482 299 SMART SM00448 170 287 1.9E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS03305 7c13dd644e6b4e61b6513360e2e31482 299 SMART SM00260 10 144 2.1E-23 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS03305 7c13dd644e6b4e61b6513360e2e31482 299 Gene3D G3DSA:3.40.50.2300 169 292 8.2E-22 T 23-04-2016 LT40_RS03305 7c13dd644e6b4e61b6513360e2e31482 299 Pfam PF00072 Response regulator receiver domain 172 281 5.5E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS19340 03c2f68dc8971ce34aaa9a2ad21b5d30 326 SUPERFAMILY SSF90002 233 325 6.28E-23 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LT40_RS19340 03c2f68dc8971ce34aaa9a2ad21b5d30 326 Gene3D G3DSA:3.30.1220.10 231 325 2.4E-31 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LT40_RS19340 03c2f68dc8971ce34aaa9a2ad21b5d30 326 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 16 194 1.1E-50 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LT40_RS19340 03c2f68dc8971ce34aaa9a2ad21b5d30 326 Gene3D G3DSA:3.40.50.300 14 214 3.9E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19340 03c2f68dc8971ce34aaa9a2ad21b5d30 326 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 233 325 1.9E-18 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LT40_RS19340 03c2f68dc8971ce34aaa9a2ad21b5d30 326 SMART SM00833 233 326 2.7E-10 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LT40_RS19340 03c2f68dc8971ce34aaa9a2ad21b5d30 326 SUPERFAMILY SSF52540 13 202 1.45E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19340 03c2f68dc8971ce34aaa9a2ad21b5d30 326 PANTHER PTHR13748:SF43 14 325 3.2E-122 T 23-04-2016 LT40_RS19340 03c2f68dc8971ce34aaa9a2ad21b5d30 326 PANTHER PTHR13748 14 325 3.2E-122 T 23-04-2016 LT40_RS10915 d6ef9971c97c6358312627a156064177 917 PANTHER PTHR10799:SF710 381 753 3.9E-61 T 23-04-2016 LT40_RS10915 d6ef9971c97c6358312627a156064177 917 SMART SM00052 672 917 1.5E-82 T 23-04-2016 IPR001633 EAL domain LT40_RS10915 d6ef9971c97c6358312627a156064177 917 Pfam PF13185 GAF domain 341 463 8.0E-10 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS10915 d6ef9971c97c6358312627a156064177 917 Pfam PF13185 GAF domain 130 268 9.7E-8 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS10915 d6ef9971c97c6358312627a156064177 917 Gene3D G3DSA:3.20.20.450 677 915 5.7E-77 T 23-04-2016 IPR001633 EAL domain LT40_RS10915 d6ef9971c97c6358312627a156064177 917 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 498 661 1.1E-41 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10915 d6ef9971c97c6358312627a156064177 917 Pfam PF00990 Diguanylate cyclase, GGDEF domain 502 657 4.8E-49 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10915 d6ef9971c97c6358312627a156064177 917 SUPERFAMILY SSF141868 678 915 4.71E-74 T 23-04-2016 IPR001633 EAL domain LT40_RS10915 d6ef9971c97c6358312627a156064177 917 PANTHER PTHR10799 779 798 3.9E-61 T 23-04-2016 LT40_RS10915 d6ef9971c97c6358312627a156064177 917 SUPERFAMILY SSF55073 506 663 6.91E-49 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS10915 d6ef9971c97c6358312627a156064177 917 SMART SM00267 490 662 8.2E-67 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10915 d6ef9971c97c6358312627a156064177 917 PANTHER PTHR10799 381 753 3.9E-61 T 23-04-2016 LT40_RS10915 d6ef9971c97c6358312627a156064177 917 SUPERFAMILY SSF55781 90 269 1.35E-16 T 23-04-2016 IPR029016 GAF domain-like LT40_RS10915 d6ef9971c97c6358312627a156064177 917 Gene3D G3DSA:3.30.70.270 503 669 2.5E-57 T 23-04-2016 LT40_RS10915 d6ef9971c97c6358312627a156064177 917 Gene3D G3DSA:3.30.450.40 299 465 2.4E-14 T 23-04-2016 IPR029016 GAF domain-like LT40_RS10915 d6ef9971c97c6358312627a156064177 917 Pfam PF00563 EAL domain 678 912 7.5E-70 T 23-04-2016 IPR001633 EAL domain LT40_RS10915 d6ef9971c97c6358312627a156064177 917 SMART SM00065 101 277 0.0019 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS10915 d6ef9971c97c6358312627a156064177 917 SMART SM00065 323 473 0.015 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS10915 d6ef9971c97c6358312627a156064177 917 SUPERFAMILY SSF55781 306 489 1.61E-16 T 23-04-2016 IPR029016 GAF domain-like LT40_RS10915 d6ef9971c97c6358312627a156064177 917 Gene3D G3DSA:3.30.450.40 106 269 2.5E-16 T 23-04-2016 IPR029016 GAF domain-like LT40_RS10915 d6ef9971c97c6358312627a156064177 917 PANTHER PTHR10799:SF710 779 798 3.9E-61 T 23-04-2016 LT40_RS18085 4e37efd82fb3036da78364260bc0d824 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 325 1.0E-126 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 LT40_RS18085 4e37efd82fb3036da78364260bc0d824 328 PANTHER PTHR30004 1 326 9.0E-199 T 23-04-2016 LT40_RS18085 4e37efd82fb3036da78364260bc0d824 328 Gene3D G3DSA:3.40.718.10 4 326 2.6E-134 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LT40_RS18085 4e37efd82fb3036da78364260bc0d824 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 325 36.226 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 LT40_RS18085 4e37efd82fb3036da78364260bc0d824 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 321 1.2E-108 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 LT40_RS18085 4e37efd82fb3036da78364260bc0d824 328 PANTHER PTHR30004:SF5 1 326 9.0E-199 T 23-04-2016 LT40_RS18085 4e37efd82fb3036da78364260bc0d824 328 SUPERFAMILY SSF53659 3 326 3.24E-114 T 23-04-2016 LT40_RS02585 8bbf4bd0e42c817a37d1d14bce871c76 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 46 63 3.6E-60 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02585 8bbf4bd0e42c817a37d1d14bce871c76 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 63 83 3.6E-60 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02585 8bbf4bd0e42c817a37d1d14bce871c76 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 205 229 3.6E-60 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02585 8bbf4bd0e42c817a37d1d14bce871c76 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 101 121 3.6E-60 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02585 8bbf4bd0e42c817a37d1d14bce871c76 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 122 142 3.6E-60 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02585 8bbf4bd0e42c817a37d1d14bce871c76 253 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 157 183 3.6E-60 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02585 8bbf4bd0e42c817a37d1d14bce871c76 253 PANTHER PTHR30071 3 225 5.7E-75 T 23-04-2016 LT40_RS02585 8bbf4bd0e42c817a37d1d14bce871c76 253 SUPERFAMILY SSF49842 174 222 9.94E-5 T 23-04-2016 IPR008983 Tumour necrosis factor-like domain GO:0005515 LT40_RS02585 8bbf4bd0e42c817a37d1d14bce871c76 253 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 46 229 6.1E-82 T 23-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02585 8bbf4bd0e42c817a37d1d14bce871c76 253 Pfam PF01578 Cytochrome C assembly protein 28 185 1.5E-26 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LT40_RS19815 a7fa583c219276c90dc8902c8bc0101a 281 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 5 271 32.748 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS19815 a7fa583c219276c90dc8902c8bc0101a 281 Pfam PF00288 GHMP kinases N terminal domain 87 144 5.7E-9 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 LT40_RS19815 a7fa583c219276c90dc8902c8bc0101a 281 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 1.5E-86 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS19815 a7fa583c219276c90dc8902c8bc0101a 281 Gene3D G3DSA:3.30.70.890 161 278 3.6E-39 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain LT40_RS19815 a7fa583c219276c90dc8902c8bc0101a 281 Gene3D G3DSA:3.30.230.10 6 160 9.9E-52 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS19815 a7fa583c219276c90dc8902c8bc0101a 281 SUPERFAMILY SSF54211 4 158 6.38E-44 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS19815 a7fa583c219276c90dc8902c8bc0101a 281 PANTHER PTHR20861:SF2 5 277 8.1E-93 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS19815 a7fa583c219276c90dc8902c8bc0101a 281 SUPERFAMILY SSF55060 161 278 2.59E-33 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain LT40_RS19815 a7fa583c219276c90dc8902c8bc0101a 281 Pfam PF08544 GHMP kinases C terminal 199 254 5.0E-7 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain LT40_RS19815 a7fa583c219276c90dc8902c8bc0101a 281 PIRSF PIRSF010376 3 279 9.0E-85 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS19815 a7fa583c219276c90dc8902c8bc0101a 281 PANTHER PTHR20861 5 277 8.1E-93 T 23-04-2016 LT40_RS17360 069fe6844b8ea34f815a58136ca10e80 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LT40_RS17360 069fe6844b8ea34f815a58136ca10e80 354 PIRSF PIRSF001359 1 329 1.0E-81 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LT40_RS17360 069fe6844b8ea34f815a58136ca10e80 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 327 9.8E-92 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LT40_RS17360 069fe6844b8ea34f815a58136ca10e80 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LT40_RS17360 069fe6844b8ea34f815a58136ca10e80 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 3.7E-211 T 23-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS17360 069fe6844b8ea34f815a58136ca10e80 354 SUPERFAMILY SSF51569 3 328 1.76E-105 T 23-04-2016 LT40_RS17360 069fe6844b8ea34f815a58136ca10e80 354 PANTHER PTHR30304 1 349 1.3E-123 T 23-04-2016 LT40_RS17360 069fe6844b8ea34f815a58136ca10e80 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.4E-95 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LT40_RS17360 069fe6844b8ea34f815a58136ca10e80 354 Gene3D G3DSA:3.20.20.70 1 335 1.1E-108 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 SUPERFAMILY SSF52317 1040 1298 2.06E-96 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 Gene3D G3DSA:3.40.50.880 1044 1267 7.5E-12 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 Pfam PF02769 AIR synthase related protein, C-terminal domain 430 587 1.1E-29 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 Pfam PF02769 AIR synthase related protein, C-terminal domain 839 968 2.7E-11 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 SMART SM01211 1043 1298 5.8E-153 T 23-04-2016 LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1043 1298 5.3E-107 T 23-04-2016 LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 SUPERFAMILY SSF109736 153 218 1.7E-21 T 23-04-2016 LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 PANTHER PTHR10099:SF5 1 1299 0.0 T 23-04-2016 LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1299 21.154 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1298 0.0 T 23-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 SUPERFAMILY SSF56042 429 612 3.59E-54 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 Gene3D G3DSA:3.30.1330.10 209 419 7.4E-39 T 23-04-2016 IPR016188 PurM-like, N-terminal domain LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 Gene3D G3DSA:3.30.1330.10 644 806 2.1E-14 T 23-04-2016 IPR016188 PurM-like, N-terminal domain LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 SUPERFAMILY SSF82697 1 150 1.41E-47 T 23-04-2016 LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 SUPERFAMILY SSF56042 824 1037 8.22E-48 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 SUPERFAMILY SSF55326 219 426 8.02E-64 T 23-04-2016 LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 SUPERFAMILY SSF55326 621 814 8.37E-67 T 23-04-2016 LT40_RS20270 ddf0ee89953f5a5c16514aebb89c5b29 1299 PANTHER PTHR10099 1 1299 0.0 T 23-04-2016 LT40_RS14885 5c2cc75741ed446089b6be6a899c283d 212 PIRSF PIRSF000495 2 210 1.4E-66 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 LT40_RS14885 5c2cc75741ed446089b6be6a899c283d 212 SUPERFAMILY SSF52317 2 208 2.66E-54 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS14885 5c2cc75741ed446089b6be6a899c283d 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 207 3.4E-65 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 LT40_RS14885 5c2cc75741ed446089b6be6a899c283d 212 PANTHER PTHR21235:SF1 4 208 3.0E-83 T 23-04-2016 LT40_RS14885 5c2cc75741ed446089b6be6a899c283d 212 Gene3D G3DSA:3.40.50.880 1 208 4.2E-76 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS14885 5c2cc75741ed446089b6be6a899c283d 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 208 34.239 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 LT40_RS14885 5c2cc75741ed446089b6be6a899c283d 212 PANTHER PTHR21235 4 208 3.0E-83 T 23-04-2016 LT40_RS14885 5c2cc75741ed446089b6be6a899c283d 212 Pfam PF00117 Glutamine amidotransferase class-I 6 205 8.3E-18 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LT40_RS05760 876301e4d923d79d4994d43d14be4713 101 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 11 83 1.1E-22 T 23-04-2016 IPR011893 Selenoprotein, Rdx type LT40_RS05760 876301e4d923d79d4994d43d14be4713 101 PANTHER PTHR36417 8 95 2.3E-51 T 23-04-2016 LT40_RS05760 876301e4d923d79d4994d43d14be4713 101 Pfam PF10262 Rdx family 11 83 5.5E-33 T 23-04-2016 IPR011893 Selenoprotein, Rdx type LT40_RS05760 876301e4d923d79d4994d43d14be4713 101 Gene3D G3DSA:3.40.30.10 4 98 3.8E-43 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS05760 876301e4d923d79d4994d43d14be4713 101 PANTHER PTHR36417:SF1 8 95 2.3E-51 T 23-04-2016 LT40_RS05760 876301e4d923d79d4994d43d14be4713 101 SUPERFAMILY SSF52833 9 92 4.7E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 SUPERFAMILY SSF54211 565 757 1.67E-33 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 PANTHER PTHR10046 119 761 1.1E-142 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 SUPERFAMILY SSF52540 307 535 2.73E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 SUPERFAMILY SSF52540 35 109 2.73E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 650 752 1.3E-6 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 Gene3D G3DSA:3.30.230.10 558 755 6.4E-29 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 PANTHER PTHR10046:SF46 119 761 1.1E-142 T 23-04-2016 LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 Pfam PF13654 AAA domain 30 540 2.9E-174 T 23-04-2016 LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 66 85 2.1E-11 T 23-04-2016 LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 647 666 2.1E-11 T 23-04-2016 LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 566 582 2.1E-11 T 23-04-2016 LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 2.1E-11 T 23-04-2016 LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 Gene3D G3DSA:3.40.50.300 35 97 7.1E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19375 0ea9e30f02cd4d8a5a57095f91de9675 813 Gene3D G3DSA:3.40.50.300 298 393 7.1E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10795 66335566d3c2169f2d3bdf328d4cbb6e 111 SUPERFAMILY SSF69721 1 111 8.5E-35 T 23-04-2016 IPR025526 DsrC-like domain LT40_RS10795 66335566d3c2169f2d3bdf328d4cbb6e 111 Gene3D G3DSA:1.10.10.370 41 111 3.8E-29 T 23-04-2016 LT40_RS10795 66335566d3c2169f2d3bdf328d4cbb6e 111 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 6 111 3.2E-42 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE LT40_RS10795 66335566d3c2169f2d3bdf328d4cbb6e 111 Pfam PF04358 DsrC like protein 6 111 1.3E-36 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE LT40_RS10795 66335566d3c2169f2d3bdf328d4cbb6e 111 Gene3D G3DSA:3.30.1420.10 1 40 2.9E-14 T 23-04-2016 LT40_RS10795 66335566d3c2169f2d3bdf328d4cbb6e 111 PIRSF PIRSF006223 4 111 2.0E-32 T 23-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE LT40_RS10795 66335566d3c2169f2d3bdf328d4cbb6e 111 PANTHER PTHR37010 1 111 1.4E-47 T 23-04-2016 LT40_RS10795 66335566d3c2169f2d3bdf328d4cbb6e 111 PANTHER PTHR37010:SF1 1 111 1.4E-47 T 23-04-2016 LT40_RS01970 9e6208785d26b2e78fc92ca6820d70b7 244 Gene3D G3DSA:3.60.21.10 172 222 2.5E-20 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS01970 9e6208785d26b2e78fc92ca6820d70b7 244 Gene3D G3DSA:3.60.21.10 2 124 2.5E-20 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS01970 9e6208785d26b2e78fc92ca6820d70b7 244 PANTHER PTHR34990 3 240 4.4E-109 T 23-04-2016 LT40_RS01970 9e6208785d26b2e78fc92ca6820d70b7 244 PANTHER PTHR34990:SF1 3 240 4.4E-109 T 23-04-2016 LT40_RS01970 9e6208785d26b2e78fc92ca6820d70b7 244 SUPERFAMILY SSF56300 2 233 1.16E-28 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS01970 9e6208785d26b2e78fc92ca6820d70b7 244 Pfam PF00149 Calcineurin-like phosphoesterase 2 198 7.9E-9 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LT40_RS01970 9e6208785d26b2e78fc92ca6820d70b7 244 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 124.486 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 LT40_RS01970 9e6208785d26b2e78fc92ca6820d70b7 244 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 231 6.7E-102 T 23-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 LT40_RS09020 9d4e22c5fe56783d6a117c44499b8bd7 108 Gene3D G3DSA:3.30.1310.10 1 108 9.9E-48 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LT40_RS09020 9d4e22c5fe56783d6a117c44499b8bd7 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 22.861 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LT40_RS09020 9d4e22c5fe56783d6a117c44499b8bd7 108 PIRSF PIRSF004555 2 108 9.7E-37 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LT40_RS09020 9d4e22c5fe56783d6a117c44499b8bd7 108 SUPERFAMILY SSF82607 10 102 1.01E-34 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LT40_RS09020 9d4e22c5fe56783d6a117c44499b8bd7 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 99 4.9E-33 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LT40_RS09020 9d4e22c5fe56783d6a117c44499b8bd7 108 PANTHER PTHR33449:SF1 1 108 4.7E-47 T 23-04-2016 LT40_RS09020 9d4e22c5fe56783d6a117c44499b8bd7 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 3.7E-33 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family LT40_RS09020 9d4e22c5fe56783d6a117c44499b8bd7 108 PANTHER PTHR33449 1 108 4.7E-47 T 23-04-2016 LT40_RS06385 8c577f664a534bde9a860370a8634610 328 PRINTS PR01713 Nucleotide sugar epimerase signature 230 245 6.8E-5 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 LT40_RS06385 8c577f664a534bde9a860370a8634610 328 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 6.8E-5 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 LT40_RS06385 8c577f664a534bde9a860370a8634610 328 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 6.8E-5 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 LT40_RS06385 8c577f664a534bde9a860370a8634610 328 PANTHER PTHR10366:SF39 1 328 3.8E-131 T 23-04-2016 LT40_RS06385 8c577f664a534bde9a860370a8634610 328 SUPERFAMILY SSF51735 2 327 4.57E-96 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06385 8c577f664a534bde9a860370a8634610 328 PANTHER PTHR10366 1 328 3.8E-131 T 23-04-2016 LT40_RS06385 8c577f664a534bde9a860370a8634610 328 Gene3D G3DSA:3.40.50.720 2 178 2.3E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06385 8c577f664a534bde9a860370a8634610 328 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 323 7.2E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06385 8c577f664a534bde9a860370a8634610 328 Gene3D G3DSA:3.90.25.10 263 328 3.1E-47 T 23-04-2016 LT40_RS06385 8c577f664a534bde9a860370a8634610 328 Gene3D G3DSA:3.90.25.10 179 231 3.1E-47 T 23-04-2016 LT40_RS06385 8c577f664a534bde9a860370a8634610 328 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 1 328 3.1E-129 T 23-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 LT40_RS14175 96508f7a66a2182cbdd710fde148ffca 417 PIRSF PIRSF000412 1 415 1.7E-169 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LT40_RS14175 96508f7a66a2182cbdd710fde148ffca 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.005 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LT40_RS14175 96508f7a66a2182cbdd710fde148ffca 417 Pfam PF00464 Serine hydroxymethyltransferase 9 386 2.1E-183 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LT40_RS14175 96508f7a66a2182cbdd710fde148ffca 417 SUPERFAMILY SSF53383 8 416 1.02E-182 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS14175 96508f7a66a2182cbdd710fde148ffca 417 PANTHER PTHR11680 1 416 0.0 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LT40_RS14175 96508f7a66a2182cbdd710fde148ffca 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LT40_RS14175 96508f7a66a2182cbdd710fde148ffca 417 PANTHER PTHR11680:SF9 1 416 0.0 T 23-04-2016 LT40_RS14175 96508f7a66a2182cbdd710fde148ffca 417 Gene3D G3DSA:3.90.1150.10 286 416 4.4E-54 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS14175 96508f7a66a2182cbdd710fde148ffca 417 Gene3D G3DSA:3.40.640.10 37 285 5.3E-109 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 248 1.3E-24 T 23-04-2016 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 1.3E-24 T 23-04-2016 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 340 362 1.3E-24 T 23-04-2016 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 91 110 1.3E-24 T 23-04-2016 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 331 1.3E-24 T 23-04-2016 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 91 372 5.0E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 316 330 1.1E-14 T 23-04-2016 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 90 112 1.1E-14 T 23-04-2016 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 355 362 1.1E-14 T 23-04-2016 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 255 1.1E-14 T 23-04-2016 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PRINTS PR00163 Rubredoxin signature 7 23 1.6E-7 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PRINTS PR00163 Rubredoxin signature 37 53 1.6E-7 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 Gene3D G3DSA:3.50.50.60 86 190 3.3E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 Gene3D G3DSA:2.20.28.10 3 58 3.0E-25 T 23-04-2016 IPR004039 Rubredoxin-type fold LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 Gene3D G3DSA:3.50.50.60 191 363 9.1E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 SUPERFAMILY SSF57802 3 58 1.68E-22 T 23-04-2016 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 SUPERFAMILY SSF51905 79 368 1.3E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 Pfam PF00301 Rubredoxin 7 53 2.4E-22 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PANTHER PTHR22912 75 425 5.8E-97 T 23-04-2016 LT40_RS07075 8b27ad3eef5d2bb1abcb648a629b3ca9 472 PANTHER PTHR22912:SF130 75 425 5.8E-97 T 23-04-2016 LT40_RS15560 10a4224d798eb315b22fd1fa0f14b210 373 PANTHER PTHR10160 3 371 9.8E-174 T 23-04-2016 LT40_RS15560 10a4224d798eb315b22fd1fa0f14b210 373 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 4.9E-43 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LT40_RS15560 10a4224d798eb315b22fd1fa0f14b210 373 SMART SM01003 4 136 2.9E-64 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal LT40_RS15560 10a4224d798eb315b22fd1fa0f14b210 373 SUPERFAMILY SSF51735 136 319 6.21E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15560 10a4224d798eb315b22fd1fa0f14b210 373 SMART SM01002 145 314 3.4E-86 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LT40_RS15560 10a4224d798eb315b22fd1fa0f14b210 373 Gene3D G3DSA:3.40.50.1770 187 368 1.1E-40 T 23-04-2016 LT40_RS15560 10a4224d798eb315b22fd1fa0f14b210 373 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 370 3.4E-74 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain LT40_RS15560 10a4224d798eb315b22fd1fa0f14b210 373 SUPERFAMILY SSF52283 2 167 2.89E-49 T 23-04-2016 LT40_RS15560 10a4224d798eb315b22fd1fa0f14b210 373 Gene3D G3DSA:3.40.50.1770 2 186 1.1E-61 T 23-04-2016 LT40_RS00355 0c9ddb61d3ab889d7dfec02f166a08c4 133 PANTHER PTHR12735:SF26 1 133 8.6E-48 T 23-04-2016 LT40_RS00355 0c9ddb61d3ab889d7dfec02f166a08c4 133 PANTHER PTHR12735 1 133 8.6E-48 T 23-04-2016 LT40_RS00355 0c9ddb61d3ab889d7dfec02f166a08c4 133 Gene3D G3DSA:3.90.1010.10 1 132 1.0E-44 T 23-04-2016 LT40_RS00355 0c9ddb61d3ab889d7dfec02f166a08c4 133 SUPERFAMILY SSF82649 2 133 1.41E-41 T 23-04-2016 LT40_RS00355 0c9ddb61d3ab889d7dfec02f166a08c4 133 Pfam PF02657 Fe-S metabolism associated domain 12 130 6.6E-39 T 23-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 Gene3D G3DSA:3.30.565.10 537 668 1.5E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 265 2.2E-21 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 Pfam PF07730 Histidine kinase 469 535 1.3E-13 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 PANTHER PTHR24421 464 679 6.6E-38 T 23-04-2016 LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 PANTHER PTHR24421 33 46 6.6E-38 T 23-04-2016 LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 SMART SM00062 46 267 2.2E-12 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 SUPERFAMILY SSF55874 544 664 9.56E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 Gene3D G3DSA:3.30.450.20 321 439 1.5E-15 T 23-04-2016 LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 PANTHER PTHR24421:SF1 464 679 6.6E-38 T 23-04-2016 LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 PANTHER PTHR24421:SF1 33 46 6.6E-38 T 23-04-2016 LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 Pfam PF13426 PAS domain 340 440 4.7E-10 T 23-04-2016 IPR000014 PAS domain LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 334 447 6.7E-12 T 23-04-2016 IPR000014 PAS domain LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 SUPERFAMILY SSF53850 43 265 8.78E-30 T 23-04-2016 LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 SMART SM00387 573 666 1.5E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 Gene3D G3DSA:3.40.190.10 44 132 1.2E-15 T 23-04-2016 LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 Gene3D G3DSA:3.40.190.10 227 265 1.2E-15 T 23-04-2016 LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 575 665 4.2E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS18120 08451212e5c361a3a9146ae23dc5e820 685 SUPERFAMILY SSF55785 340 449 4.61E-20 T 23-04-2016 IPR000014 PAS domain LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 SUPERFAMILY SSF54849 137 203 4.81E-24 T 23-04-2016 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 SUPERFAMILY SSF52029 184 376 3.59E-82 T 23-04-2016 IPR027409 GroEL-like apical domain LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.345 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-74 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 Gene3D G3DSA:3.50.7.10 189 366 1.9E-97 T 23-04-2016 IPR027409 GroEL-like apical domain LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.8E-252 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 SUPERFAMILY SSF48592 406 521 1.5E-76 T 23-04-2016 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 SUPERFAMILY SSF48592 7 134 1.5E-76 T 23-04-2016 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 Gene3D G3DSA:1.10.560.10 3 188 6.9E-48 T 23-04-2016 IPR027413 GroEL-like equatorial domain LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 PANTHER PTHR11353 2 548 3.6E-246 T 23-04-2016 LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 Gene3D G3DSA:1.10.560.10 367 518 1.3E-42 T 23-04-2016 IPR027413 GroEL-like equatorial domain LT40_RS04160 e436db92d5be8da602d5a8269a087b75 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 525 7.9E-97 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 SUPERFAMILY SSF52540 38 374 1.21E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 PANTHER PTHR24031 412 441 2.4E-78 T 23-04-2016 LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 PANTHER PTHR24031 18 389 2.4E-78 T 23-04-2016 LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 PANTHER PTHR24031 1413 1426 2.4E-78 T 23-04-2016 LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 Pfam PF08494 DEAD/H associated 636 838 5.1E-53 T 23-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 SMART SM00490 291 371 2.6E-16 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 Pfam PF00271 Helicase conserved C-terminal domain 265 371 6.5E-16 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 Gene3D G3DSA:3.40.50.300 260 385 5.9E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 Pfam PF00270 DEAD/DEAH box helicase 30 216 7.3E-30 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 SMART SM00487 25 248 5.1E-31 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 PANTHER PTHR24031:SF336 412 441 2.4E-78 T 23-04-2016 LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 PANTHER PTHR24031:SF336 18 389 2.4E-78 T 23-04-2016 LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 PANTHER PTHR24031:SF336 1413 1426 2.4E-78 T 23-04-2016 LT40_RS05020 5e40d44a9f3403ca1b55149015211196 1430 Gene3D G3DSA:3.40.50.300 18 214 3.1E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16915 5dc86fb9e2c73ecc361391e713a59205 105 PANTHER PTHR34981 3 101 3.3E-23 T 23-04-2016 LT40_RS16915 5dc86fb9e2c73ecc361391e713a59205 105 PANTHER PTHR34981:SF1 3 101 3.3E-23 T 23-04-2016 LT40_RS16915 5dc86fb9e2c73ecc361391e713a59205 105 SUPERFAMILY SSF102829 7 91 2.35E-21 T 23-04-2016 IPR007838 Cell division protein ZapA-like LT40_RS16915 5dc86fb9e2c73ecc361391e713a59205 105 Pfam PF05164 Cell division protein ZapA 7 91 1.1E-21 T 23-04-2016 IPR007838 Cell division protein ZapA-like LT40_RS19190 5327f01e2302c241ccc2c5063f3548e8 201 Pfam PF00775 Dioxygenase 33 191 1.6E-14 T 23-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 LT40_RS19190 5327f01e2302c241ccc2c5063f3548e8 201 PANTHER PTHR33711 1 201 4.9E-81 T 23-04-2016 LT40_RS19190 5327f01e2302c241ccc2c5063f3548e8 201 SUPERFAMILY SSF49482 4 201 2.88E-57 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 LT40_RS19190 5327f01e2302c241ccc2c5063f3548e8 201 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 9 201 3.0E-76 T 23-04-2016 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 LT40_RS19190 5327f01e2302c241ccc2c5063f3548e8 201 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 52 80 - T 23-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 LT40_RS19190 5327f01e2302c241ccc2c5063f3548e8 201 Gene3D G3DSA:2.60.130.10 4 201 3.9E-65 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 LT40_RS19190 5327f01e2302c241ccc2c5063f3548e8 201 PANTHER PTHR33711:SF2 1 201 4.9E-81 T 23-04-2016 LT40_RS07265 f6b7d457ed35a216cf4fb263bb7dbc10 147 PANTHER PTHR31964:SF42 1 141 4.2E-31 T 23-04-2016 LT40_RS07265 f6b7d457ed35a216cf4fb263bb7dbc10 147 PRINTS PR01438 Universal stress protein signature 102 114 1.6E-14 T 23-04-2016 IPR006015 Universal stress protein A LT40_RS07265 f6b7d457ed35a216cf4fb263bb7dbc10 147 PRINTS PR01438 Universal stress protein signature 119 141 1.6E-14 T 23-04-2016 IPR006015 Universal stress protein A LT40_RS07265 f6b7d457ed35a216cf4fb263bb7dbc10 147 PRINTS PR01438 Universal stress protein signature 3 21 1.6E-14 T 23-04-2016 IPR006015 Universal stress protein A LT40_RS07265 f6b7d457ed35a216cf4fb263bb7dbc10 147 SUPERFAMILY SSF52402 3 141 3.01E-36 T 23-04-2016 LT40_RS07265 f6b7d457ed35a216cf4fb263bb7dbc10 147 Gene3D G3DSA:3.40.50.620 3 141 2.6E-38 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS07265 f6b7d457ed35a216cf4fb263bb7dbc10 147 PIRSF PIRSF006276 1 144 1.7E-48 T 23-04-2016 IPR006015 Universal stress protein A LT40_RS07265 f6b7d457ed35a216cf4fb263bb7dbc10 147 PANTHER PTHR31964 1 141 4.2E-31 T 23-04-2016 LT40_RS07265 f6b7d457ed35a216cf4fb263bb7dbc10 147 Pfam PF00582 Universal stress protein family 3 141 1.6E-33 T 23-04-2016 IPR006016 UspA GO:0006950 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 285 388 3.6E-18 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 410 2.2E-160 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 411 42.332 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 34 281 8.3E-74 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 Gene3D G3DSA:2.40.37.10 267 412 8.0E-51 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 SUPERFAMILY SSF51419 26 282 6.83E-81 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 SUPERFAMILY SSF50621 255 411 3.56E-53 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 PANTHER PTHR11482 1 414 4.0E-179 T 23-04-2016 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 PANTHER PTHR11482:SF5 1 414 4.0E-179 T 23-04-2016 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 Gene3D G3DSA:3.20.20.10 36 266 1.9E-84 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 1.6E-27 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 368 381 1.6E-27 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 1.6E-27 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 1.6E-27 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 1.6E-27 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 1.6E-30 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 378 400 1.6E-30 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 298 316 1.6E-30 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 1.6E-30 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 225 241 - T 23-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 LT40_RS16730 e9600f1235f9c19a008bfe83a635a3b1 415 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 23-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 SUPERFAMILY SSF54534 289 389 6.21E-32 T 23-04-2016 LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 Gene3D G3DSA:3.10.50.40 290 402 2.6E-37 T 23-04-2016 LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 Gene3D G3DSA:3.10.50.40 175 289 1.3E-31 T 23-04-2016 LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 SUPERFAMILY SSF54534 179 282 1.31E-27 T 23-04-2016 LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 Pfam PF09312 SurA N-terminal domain 30 149 3.7E-45 T 23-04-2016 IPR015391 SurA N-terminal LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 Gene3D G3DSA:1.10.3120.10 27 123 3.8E-5 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 Hamap MF_01183 Chaperone SurA [surA]. 14 433 33.247 T 23-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 PANTHER PTHR10657:SF16 12 431 5.4E-208 T 23-04-2016 LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 Pfam PF00639 PPIC-type PPIASE domain 188 277 2.8E-18 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 Pfam PF13616 PPIC-type PPIASE domain 285 387 1.4E-26 T 23-04-2016 LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 PANTHER PTHR10657 12 431 5.4E-208 T 23-04-2016 LT40_RS18090 473b2db79703f307c594638c2dee8cda 440 SUPERFAMILY SSF109998 30 209 3.92E-43 T 23-04-2016 IPR027304 Trigger factor/SurA domain LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 Gene3D G3DSA:3.40.50.80 123 248 1.6E-34 T 23-04-2016 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 Gene3D G3DSA:3.10.20.30 249 365 1.5E-30 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 PANTHER PTHR19370 19 272 2.0E-127 T 23-04-2016 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 SUPERFAMILY SSF63380 13 117 1.22E-28 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 290 359 1.4E-11 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 Gene3D G3DSA:2.40.30.10 20 114 7.5E-29 T 23-04-2016 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 316 324 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 48 60 6.5E-9 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 127 146 6.5E-9 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 120 6.5E-9 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 PRINTS PR00410 Phenol hydroxylase reductase family signature 220 228 6.5E-9 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 67 74 4.5E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 127 146 4.5E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 220 228 4.5E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 164 175 4.5E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 SUPERFAMILY SSF54292 243 366 3.67E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 SUPERFAMILY SSF52343 107 250 7.6E-37 T 23-04-2016 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 PANTHER PTHR19370:SF89 19 272 2.0E-127 T 23-04-2016 LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 Pfam PF00970 Oxidoreductase FAD-binding domain 25 116 1.0E-16 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain LT40_RS17565 b9b892e76cf61a5b33cc37364eac6699 366 Pfam PF00175 Oxidoreductase NAD-binding domain 129 234 6.9E-15 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 PANTHER PTHR11079:SF10 4 239 9.7E-63 T 23-04-2016 LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 369 2.6E-49 T 23-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 PANTHER PTHR11079 4 239 9.7E-63 T 23-04-2016 LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 Gene3D G3DSA:3.40.430.10 134 368 1.2E-68 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 SUPERFAMILY SSF53927 8 150 1.29E-48 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 Gene3D G3DSA:3.40.140.10 8 133 2.0E-33 T 23-04-2016 LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 Pfam PF01872 RibD C-terminal domain 152 365 1.0E-43 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 367 1.5E-113 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 PIRSF PIRSF006769 4 373 5.4E-125 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 105 4.4E-20 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LT40_RS18570 0ebb6b022ea81fe76a54374150d4c062 387 SUPERFAMILY SSF53597 150 368 7.41E-53 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 SUPERFAMILY SSF52540 3 232 3.68E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 Pfam PF03144 Elongation factor Tu domain 2 208 278 1.6E-7 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 SUPERFAMILY SSF54980 295 373 3.27E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 1.6E-50 T 23-04-2016 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 PANTHER PTHR23115:SF175 400 598 3.6E-276 T 23-04-2016 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 3.9E-50 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 299.776 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 TIGRFAM TIGR01393 lepA: elongation factor 4 6 597 2.7E-291 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 Pfam PF00679 Elongation factor G C-terminus 403 487 5.1E-20 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 PANTHER PTHR23115 7 376 3.6E-276 T 23-04-2016 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 PANTHER PTHR23115 400 598 3.6E-276 T 23-04-2016 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 Gene3D G3DSA:2.40.30.10 197 292 2.2E-20 T 23-04-2016 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 PRINTS PR00315 GTP-binding elongation factor signature 93 104 8.7E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 PRINTS PR00315 GTP-binding elongation factor signature 77 87 8.7E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 PRINTS PR00315 GTP-binding elongation factor signature 9 22 8.7E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 PRINTS PR00315 GTP-binding elongation factor signature 52 60 8.7E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.7E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 SUPERFAMILY SSF54980 403 496 1.58E-24 T 23-04-2016 IPR009022 Elongation factor G, III-V domain LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 PANTHER PTHR23115:SF175 7 376 3.6E-276 T 23-04-2016 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 Gene3D G3DSA:3.40.50.300 4 196 2.6E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 Gene3D G3DSA:3.30.70.240 404 492 9.6E-21 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 Gene3D G3DSA:3.30.70.870 295 372 2.0E-25 T 23-04-2016 LT40_RS04625 f2013fd6f7c8cc8184e07d64a68ca001 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 175 6.9E-18 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 822 943 8.7E-34 T 23-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 PANTHER PTHR22773 1 575 4.9E-214 T 23-04-2016 LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 113 4.5E-9 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 150 171 8.4E-39 T 23-04-2016 LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 8.4E-39 T 23-04-2016 LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 103 123 8.4E-39 T 23-04-2016 LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 306 318 8.4E-39 T 23-04-2016 LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 8.4E-39 T 23-04-2016 LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 264 8.4E-39 T 23-04-2016 LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 8.4E-39 T 23-04-2016 LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 PANTHER PTHR22773:SF46 1 575 4.9E-214 T 23-04-2016 LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 Pfam PF00361 Proton-conducting membrane transporter 126 405 7.5E-63 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 LT40_RS02865 d8585320b4141fd608f65dd3997a4bb2 972 Pfam PF13244 Domain of unknown function (DUF4040) 615 680 2.5E-20 T 23-04-2016 IPR025383 Domain of unknown function DUF4040 LT40_RS01570 fef9c3948774f7cdc3dbd8aa2fd8208e 87 PANTHER PTHR40688 3 73 1.8E-19 T 23-04-2016 LT40_RS01570 fef9c3948774f7cdc3dbd8aa2fd8208e 87 PANTHER PTHR40688:SF1 3 73 1.8E-19 T 23-04-2016 LT40_RS01570 fef9c3948774f7cdc3dbd8aa2fd8208e 87 SUPERFAMILY SSF47598 5 43 1.51E-6 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LT40_RS01570 fef9c3948774f7cdc3dbd8aa2fd8208e 87 Pfam PF01402 Ribbon-helix-helix protein, copG family 6 42 6.4E-8 T 23-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 LT40_RS11845 40a39859d194a9b9d84866518d4fdf1f 596 SUPERFAMILY SSF90123 20 313 8.11E-44 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS11845 40a39859d194a9b9d84866518d4fdf1f 596 SUPERFAMILY SSF90123 490 499 8.11E-44 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS11845 40a39859d194a9b9d84866518d4fdf1f 596 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS11845 40a39859d194a9b9d84866518d4fdf1f 596 SUPERFAMILY SSF52540 338 584 1.11E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11845 40a39859d194a9b9d84866518d4fdf1f 596 PANTHER PTHR24221 24 593 4.2E-176 T 23-04-2016 LT40_RS11845 40a39859d194a9b9d84866518d4fdf1f 596 Pfam PF00005 ABC transporter 366 514 5.9E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS11845 40a39859d194a9b9d84866518d4fdf1f 596 Gene3D G3DSA:1.20.1560.10 22 317 1.0E-33 T 23-04-2016 LT40_RS11845 40a39859d194a9b9d84866518d4fdf1f 596 Gene3D G3DSA:3.40.50.300 348 579 1.7E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11845 40a39859d194a9b9d84866518d4fdf1f 596 SMART SM00382 374 560 1.8E-20 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS11845 40a39859d194a9b9d84866518d4fdf1f 596 Pfam PF00664 ABC transporter transmembrane region 29 301 8.8E-19 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 PANTHER PTHR11552:SF135 1 555 1.6E-253 T 23-04-2016 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 Pfam PF05199 GMC oxidoreductase 395 529 7.6E-40 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 SUPERFAMILY SSF51905 1 295 5.18E-90 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 SUPERFAMILY SSF51905 478 537 5.18E-90 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 Pfam PF00732 GMC oxidoreductase 5 302 9.8E-98 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 SUPERFAMILY SSF54373 297 479 4.71E-62 T 23-04-2016 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 PIRSF PIRSF000137 1 543 5.8E-142 T 23-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 3 556 62.028 T 23-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 Gene3D G3DSA:3.50.50.60 2 129 1.1E-121 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 Gene3D G3DSA:3.50.50.60 192 320 1.1E-121 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 Gene3D G3DSA:3.50.50.60 472 536 1.1E-121 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 538 7.4E-283 T 23-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 PANTHER PTHR11552 1 555 1.6E-253 T 23-04-2016 LT40_RS17415 e3b3bbf9eb2e77df05729e29336283e3 568 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 261 275 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 LT40_RS11515 1f012c469ea27a97f95b1f5616e8b9d0 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 25 251 9.9E-18 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS11515 1f012c469ea27a97f95b1f5616e8b9d0 260 PANTHER PTHR15822:SF7 17 260 2.3E-86 T 23-04-2016 LT40_RS11515 1f012c469ea27a97f95b1f5616e8b9d0 260 PANTHER PTHR15822 17 260 2.3E-86 T 23-04-2016 LT40_RS11515 1f012c469ea27a97f95b1f5616e8b9d0 260 SUPERFAMILY SSF56219 18 258 5.63E-46 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS11515 1f012c469ea27a97f95b1f5616e8b9d0 260 Gene3D G3DSA:3.60.10.10 15 259 6.2E-14 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS15240 1985da23126a343bca611488a27172f5 305 SUPERFAMILY SSF53850 90 296 1.77E-43 T 23-04-2016 LT40_RS15240 1985da23126a343bca611488a27172f5 305 Pfam PF03466 LysR substrate binding domain 90 293 2.9E-43 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS15240 1985da23126a343bca611488a27172f5 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.7E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15240 1985da23126a343bca611488a27172f5 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.7E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15240 1985da23126a343bca611488a27172f5 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.7E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15240 1985da23126a343bca611488a27172f5 305 SUPERFAMILY SSF46785 5 111 1.43E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15240 1985da23126a343bca611488a27172f5 305 Gene3D G3DSA:3.40.190.10 178 260 5.3E-18 T 23-04-2016 LT40_RS15240 1985da23126a343bca611488a27172f5 305 PANTHER PTHR30537:SF5 1 303 9.1E-96 T 23-04-2016 LT40_RS15240 1985da23126a343bca611488a27172f5 305 PANTHER PTHR30537 1 303 9.1E-96 T 23-04-2016 LT40_RS15240 1985da23126a343bca611488a27172f5 305 Gene3D G3DSA:1.10.10.10 4 82 5.2E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15240 1985da23126a343bca611488a27172f5 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.2E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15240 1985da23126a343bca611488a27172f5 305 Gene3D G3DSA:3.40.190.10 92 177 4.4E-22 T 23-04-2016 LT40_RS10170 2c6f786f88ae2247c1b3a224c8b42802 390 SUPERFAMILY SSF111369 81 154 3.66E-7 T 23-04-2016 LT40_RS10170 2c6f786f88ae2247c1b3a224c8b42802 390 PANTHER PTHR30386 8 374 9.0E-90 T 23-04-2016 LT40_RS10170 2c6f786f88ae2247c1b3a224c8b42802 390 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 361 376 4.5E-5 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS10170 2c6f786f88ae2247c1b3a224c8b42802 390 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 90 110 4.5E-5 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS10170 2c6f786f88ae2247c1b3a224c8b42802 390 Gene3D G3DSA:2.40.50.100 82 112 8.3E-16 T 23-04-2016 LT40_RS10170 2c6f786f88ae2247c1b3a224c8b42802 390 Gene3D G3DSA:2.40.50.100 243 276 8.3E-16 T 23-04-2016 LT40_RS10170 2c6f786f88ae2247c1b3a224c8b42802 390 Pfam PF13533 Biotin-lipoyl like 80 127 3.9E-8 T 23-04-2016 LT40_RS10170 2c6f786f88ae2247c1b3a224c8b42802 390 Pfam PF13437 HlyD family secretion protein 246 364 2.1E-15 T 23-04-2016 LT40_RS10170 2c6f786f88ae2247c1b3a224c8b42802 390 PANTHER PTHR30386:SF0 8 374 9.0E-90 T 23-04-2016 LT40_RS10170 2c6f786f88ae2247c1b3a224c8b42802 390 SUPERFAMILY SSF111369 201 321 6.28E-12 T 23-04-2016 LT40_RS07000 9afcd21b4dcd442d020af3da04166410 293 Gene3D G3DSA:1.20.1260.10 1 199 2.9E-77 T 23-04-2016 IPR012347 Ferritin-related LT40_RS07000 9afcd21b4dcd442d020af3da04166410 293 PANTHER PTHR30565 2 273 9.8E-140 T 23-04-2016 LT40_RS07000 9afcd21b4dcd442d020af3da04166410 293 PANTHER PTHR30565:SF3 2 273 9.8E-140 T 23-04-2016 LT40_RS07000 9afcd21b4dcd442d020af3da04166410 293 Pfam PF05067 Manganese containing catalase 1 291 2.7E-97 T 23-04-2016 IPR007760 Manganese catalase LT40_RS07000 9afcd21b4dcd442d020af3da04166410 293 SUPERFAMILY SSF47240 1 287 8.43E-86 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS05555 4e4c7085ebe6ae40fe990c756dc9d648 156 PIRSF PIRSF006181 1 156 8.6E-54 T 23-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LT40_RS05555 4e4c7085ebe6ae40fe990c756dc9d648 156 Gene3D G3DSA:3.90.960.10 1 153 1.8E-56 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LT40_RS05555 4e4c7085ebe6ae40fe990c756dc9d648 156 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 153 1.0E-52 T 23-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LT40_RS05555 4e4c7085ebe6ae40fe990c756dc9d648 156 SUPERFAMILY SSF55826 2 153 1.57E-43 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LT40_RS05555 4e4c7085ebe6ae40fe990c756dc9d648 156 Pfam PF04073 Aminoacyl-tRNA editing domain 32 141 5.0E-25 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LT40_RS05555 4e4c7085ebe6ae40fe990c756dc9d648 156 PANTHER PTHR30411 1 153 6.5E-62 T 23-04-2016 LT40_RS05555 4e4c7085ebe6ae40fe990c756dc9d648 156 PANTHER PTHR30411:SF0 1 153 6.5E-62 T 23-04-2016 LT40_RS20410 9f8870663a60acc545d9c357fc598ad8 179 Pfam PF07152 YaeQ protein 1 171 9.7E-62 T 23-04-2016 IPR009822 YaeQ LT40_RS20410 9f8870663a60acc545d9c357fc598ad8 179 SMART SM01322 1 174 2.0E-91 T 23-04-2016 IPR009822 YaeQ LT40_RS20410 9f8870663a60acc545d9c357fc598ad8 179 PANTHER PTHR38784:SF1 1 179 9.6E-82 T 23-04-2016 LT40_RS20410 9f8870663a60acc545d9c357fc598ad8 179 Gene3D G3DSA:3.10.640.10 1 175 1.5E-67 T 23-04-2016 LT40_RS20410 9f8870663a60acc545d9c357fc598ad8 179 PANTHER PTHR38784 1 179 9.6E-82 T 23-04-2016 LT40_RS20410 9f8870663a60acc545d9c357fc598ad8 179 PIRSF PIRSF011484 1 177 4.2E-53 T 23-04-2016 IPR009822 YaeQ LT40_RS20410 9f8870663a60acc545d9c357fc598ad8 179 SUPERFAMILY SSF52980 2 176 3.22E-61 T 23-04-2016 IPR011335 Restriction endonuclease type II-like LT40_RS02115 3620ec80d3e6b9a06d11b56b4b20970a 90 Gene3D G3DSA:4.10.520.10 1 90 3.3E-37 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LT40_RS02115 3620ec80d3e6b9a06d11b56b4b20970a 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.3E-33 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS02115 3620ec80d3e6b9a06d11b56b4b20970a 90 SUPERFAMILY SSF47729 1 90 3.09E-32 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LT40_RS02115 3620ec80d3e6b9a06d11b56b4b20970a 90 PANTHER PTHR33175 1 90 3.2E-43 T 23-04-2016 LT40_RS02115 3620ec80d3e6b9a06d11b56b4b20970a 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.7E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS02115 3620ec80d3e6b9a06d11b56b4b20970a 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.7E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS02115 3620ec80d3e6b9a06d11b56b4b20970a 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.7E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS02115 3620ec80d3e6b9a06d11b56b4b20970a 90 SMART SM00411 1 90 9.4E-44 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS02115 3620ec80d3e6b9a06d11b56b4b20970a 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LT40_RS03025 80643e2fc3ccdd5263466cf5623a2412 241 SUPERFAMILY SSF49354 20 160 2.88E-8 T 23-04-2016 IPR008962 PapD-like LT40_RS12310 2b3219b72cbaaefac65bfe1dea80a881 171 Gene3D G3DSA:1.10.3330.10 11 171 4.3E-61 T 23-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 LT40_RS12310 2b3219b72cbaaefac65bfe1dea80a881 171 SUPERFAMILY SSF158694 11 171 7.06E-53 T 23-04-2016 LT40_RS12310 2b3219b72cbaaefac65bfe1dea80a881 171 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 13 171 1.2E-67 T 23-04-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 LT40_RS12310 2b3219b72cbaaefac65bfe1dea80a881 171 Pfam PF09349 OHCU decarboxylase 11 169 2.1E-46 T 23-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 LT40_RS06270 8c900e8d5e70107097cd126344f65407 271 Gene3D G3DSA:3.40.50.1820 7 262 7.1E-57 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS06270 8c900e8d5e70107097cd126344f65407 271 SUPERFAMILY SSF53474 6 262 4.43E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS06270 8c900e8d5e70107097cd126344f65407 271 PANTHER PTHR10992:SF892 9 264 7.6E-99 T 23-04-2016 LT40_RS06270 8c900e8d5e70107097cd126344f65407 271 Pfam PF12697 Alpha/beta hydrolase family 19 257 7.4E-26 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS06270 8c900e8d5e70107097cd126344f65407 271 PANTHER PTHR10992 9 264 7.6E-99 T 23-04-2016 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 113 232 2.4E-39 T 23-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 Gene3D G3DSA:3.50.50.60 562 647 1.6E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 Gene3D G3DSA:3.50.50.60 259 338 1.6E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 Gene3D G3DSA:3.50.50.60 389 467 1.6E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 Pfam PF01266 FAD dependent oxidoreductase 260 626 6.0E-48 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 SUPERFAMILY SSF53335 89 110 1.76E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 SUPERFAMILY SSF53335 138 206 1.76E-7 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 PANTHER PTHR13847:SF206 596 655 1.0E-83 T 23-04-2016 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 PANTHER PTHR13847:SF206 217 576 1.0E-83 T 23-04-2016 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 SUPERFAMILY SSF54373 469 558 9.16E-6 T 23-04-2016 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 6 650 26.041 T 23-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 PANTHER PTHR13847 596 655 1.0E-83 T 23-04-2016 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 PANTHER PTHR13847 217 576 1.0E-83 T 23-04-2016 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 260 654 1.4E-137 T 23-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 SUPERFAMILY SSF51905 260 468 4.01E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 SUPERFAMILY SSF51905 562 652 4.01E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00940 8b4bde07623e9fddc0a590863348f1ba 657 Gene3D G3DSA:3.40.50.150 10 234 1.7E-83 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS07360 4a2442420d1d7624c8a278d78155e1d3 441 Gene3D G3DSA:3.40.190.10 179 288 1.3E-9 T 23-04-2016 LT40_RS07360 4a2442420d1d7624c8a278d78155e1d3 441 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 15 45 1.5E-4 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LT40_RS07360 4a2442420d1d7624c8a278d78155e1d3 441 PANTHER PTHR30024:SF10 11 438 2.8E-155 T 23-04-2016 LT40_RS07360 4a2442420d1d7624c8a278d78155e1d3 441 Pfam PF13379 NMT1-like family 51 309 1.0E-99 T 23-04-2016 LT40_RS07360 4a2442420d1d7624c8a278d78155e1d3 441 PANTHER PTHR30024 11 438 2.8E-155 T 23-04-2016 LT40_RS07360 4a2442420d1d7624c8a278d78155e1d3 441 SUPERFAMILY SSF53850 53 298 1.05E-24 T 23-04-2016 LT40_RS07710 7c6f422bc00fbfa41d6fe40e6d398d95 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 348 543 2.8E-49 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS07710 7c6f422bc00fbfa41d6fe40e6d398d95 546 SMART SM00283 283 544 5.6E-75 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS07710 7c6f422bc00fbfa41d6fe40e6d398d95 546 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 174 2.7E-9 T 23-04-2016 IPR024478 4HB MCP domain LT40_RS07710 7c6f422bc00fbfa41d6fe40e6d398d95 546 Gene3D G3DSA:1.10.287.950 298 512 1.5E-55 T 23-04-2016 LT40_RS07710 7c6f422bc00fbfa41d6fe40e6d398d95 546 PANTHER PTHR32089 251 543 5.2E-94 T 23-04-2016 LT40_RS07710 7c6f422bc00fbfa41d6fe40e6d398d95 546 PANTHER PTHR32089:SF34 251 543 5.2E-94 T 23-04-2016 LT40_RS07710 7c6f422bc00fbfa41d6fe40e6d398d95 546 SUPERFAMILY SSF58104 250 544 3.4E-66 T 23-04-2016 LT40_RS09545 eaf32c98b19c70de949daad3e16c5f3a 341 Gene3D G3DSA:1.10.1530.10 11 79 3.7E-23 T 23-04-2016 LT40_RS09545 eaf32c98b19c70de949daad3e16c5f3a 341 SUPERFAMILY SSF89733 11 339 1.57E-101 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS09545 eaf32c98b19c70de949daad3e16c5f3a 341 Gene3D G3DSA:3.30.1370.60 80 282 1.6E-78 T 23-04-2016 LT40_RS09545 eaf32c98b19c70de949daad3e16c5f3a 341 PANTHER PTHR11091 11 339 1.0E-82 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS09545 eaf32c98b19c70de949daad3e16c5f3a 341 Pfam PF02615 Malate/L-lactate dehydrogenase 12 335 9.4E-105 T 23-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 SUPERFAMILY SSF46785 8 88 9.07E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 Gene3D G3DSA:3.40.190.10 183 269 1.5E-24 T 23-04-2016 LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 PANTHER PTHR30118 1 296 9.0E-90 T 23-04-2016 LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 Gene3D G3DSA:1.10.10.10 2 87 2.3E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 PANTHER PTHR30118:SF8 1 296 9.0E-90 T 23-04-2016 LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 9.0E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 9.0E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 9.0E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 70 3.4E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 SUPERFAMILY SSF53850 93 294 1.25E-35 T 23-04-2016 LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 Gene3D G3DSA:3.40.190.10 273 300 2.7E-21 T 23-04-2016 LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 Gene3D G3DSA:3.40.190.10 93 176 2.7E-21 T 23-04-2016 LT40_RS16680 07ad06126da0be40f2d3d664aecf5680 304 Pfam PF03466 LysR substrate binding domain 100 294 1.6E-21 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS19150 2fd958ecf104876b2b348e5bdef49884 256 SUPERFAMILY SSF88713 3 251 1.93E-99 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LT40_RS19150 2fd958ecf104876b2b348e5bdef49884 256 Pfam PF03746 LamB/YcsF family 4 242 5.8E-102 T 23-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF LT40_RS19150 2fd958ecf104876b2b348e5bdef49884 256 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 45.848 T 23-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF LT40_RS19150 2fd958ecf104876b2b348e5bdef49884 256 PANTHER PTHR30292 1 253 1.4E-120 T 23-04-2016 LT40_RS19150 2fd958ecf104876b2b348e5bdef49884 256 PANTHER PTHR30292:SF0 1 253 1.4E-120 T 23-04-2016 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 SMART SM00487 150 347 8.2E-17 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 Gene3D G3DSA:3.40.50.300 156 326 1.5E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 Pfam PF12137 RNA polymerase recycling family C-terminal 589 946 2.6E-139 T 23-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 Pfam PF00271 Helicase conserved C-terminal domain 475 584 7.5E-12 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 PANTHER PTHR10799 389 676 1.3E-278 T 23-04-2016 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 PANTHER PTHR10799 874 948 1.3E-278 T 23-04-2016 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 PANTHER PTHR10799 164 352 1.3E-278 T 23-04-2016 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 PANTHER PTHR10799 781 822 1.3E-278 T 23-04-2016 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 SMART SM00490 500 584 1.5E-13 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 PANTHER PTHR10799:SF610 389 676 1.3E-278 T 23-04-2016 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 PANTHER PTHR10799:SF610 874 948 1.3E-278 T 23-04-2016 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 PANTHER PTHR10799:SF610 164 352 1.3E-278 T 23-04-2016 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 PANTHER PTHR10799:SF610 781 822 1.3E-278 T 23-04-2016 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 SUPERFAMILY SSF52540 153 352 3.01E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 3 948 69.915 T 23-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 SUPERFAMILY SSF52540 271 335 2.66E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 Pfam PF00176 SNF2 family N-terminal domain 119 343 1.5E-14 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 SUPERFAMILY SSF52540 463 632 2.66E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00890 806f9d40a8799d85980ba93e34381144 948 Gene3D G3DSA:3.40.50.300 466 610 2.5E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04055 ddb8bb39e9f653f13d520ef0116241e8 358 SUPERFAMILY SSF53756 6 356 7.85E-116 T 23-04-2016 LT40_RS04055 ddb8bb39e9f653f13d520ef0116241e8 358 Gene3D G3DSA:3.40.50.2000 254 332 3.0E-5 T 23-04-2016 LT40_RS04055 ddb8bb39e9f653f13d520ef0116241e8 358 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 356 37.427 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS04055 ddb8bb39e9f653f13d520ef0116241e8 358 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 7 143 2.4E-41 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS04055 ddb8bb39e9f653f13d520ef0116241e8 358 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 6 351 3.2E-107 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS04055 ddb8bb39e9f653f13d520ef0116241e8 358 PANTHER PTHR21015:SF22 6 357 5.8E-121 T 23-04-2016 LT40_RS04055 ddb8bb39e9f653f13d520ef0116241e8 358 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 343 6.5E-36 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS04055 ddb8bb39e9f653f13d520ef0116241e8 358 Gene3D G3DSA:3.40.50.2000 5 194 1.0E-68 T 23-04-2016 LT40_RS04055 ddb8bb39e9f653f13d520ef0116241e8 358 PANTHER PTHR21015 6 357 5.8E-121 T 23-04-2016 LT40_RS07525 bfe71b2a2577dc76ce68f4585ed9dcc5 338 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 337 50.565 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 LT40_RS07525 bfe71b2a2577dc76ce68f4585ed9dcc5 338 SUPERFAMILY SSF55681 92 338 1.34E-81 T 23-04-2016 LT40_RS07525 bfe71b2a2577dc76ce68f4585ed9dcc5 338 PANTHER PTHR11538 92 338 2.2E-109 T 23-04-2016 LT40_RS07525 bfe71b2a2577dc76ce68f4585ed9dcc5 338 Pfam PF01409 tRNA synthetases class II core domain (F) 92 337 2.3E-108 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 LT40_RS07525 bfe71b2a2577dc76ce68f4585ed9dcc5 338 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.3E-27 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LT40_RS07525 bfe71b2a2577dc76ce68f4585ed9dcc5 338 SUPERFAMILY SSF46589 13 99 2.72E-23 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 LT40_RS07525 bfe71b2a2577dc76ce68f4585ed9dcc5 338 Gene3D G3DSA:3.30.930.10 9 338 6.5E-134 T 23-04-2016 LT40_RS07525 bfe71b2a2577dc76ce68f4585ed9dcc5 338 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 337 2.0E-109 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LT40_RS00245 3fa57232ab5b1ea579ef3bcdd0c45fdb 294 Pfam PF02153 Prephenate dehydrogenase 138 258 1.5E-11 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 LT40_RS00245 3fa57232ab5b1ea579ef3bcdd0c45fdb 294 PANTHER PTHR21363 4 269 5.8E-16 T 23-04-2016 LT40_RS00245 3fa57232ab5b1ea579ef3bcdd0c45fdb 294 SUPERFAMILY SSF48179 161 285 3.97E-25 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS00245 3fa57232ab5b1ea579ef3bcdd0c45fdb 294 Gene3D G3DSA:1.10.3660.10 168 289 5.2E-26 T 23-04-2016 LT40_RS00245 3fa57232ab5b1ea579ef3bcdd0c45fdb 294 SUPERFAMILY SSF51735 2 155 3.23E-8 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS00245 3fa57232ab5b1ea579ef3bcdd0c45fdb 294 Gene3D G3DSA:3.40.50.720 2 166 1.7E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12600 a76299aa817d9bc09920068587c68d4b 124 PANTHER PTHR10978 1 124 4.3E-64 T 23-04-2016 LT40_RS12600 a76299aa817d9bc09920068587c68d4b 124 PIRSF PIRSF000178 1 124 7.1E-31 T 23-04-2016 LT40_RS12600 a76299aa817d9bc09920068587c68d4b 124 PANTHER PTHR10978:SF4 1 124 4.3E-64 T 23-04-2016 LT40_RS12600 a76299aa817d9bc09920068587c68d4b 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 23-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 LT40_RS12600 a76299aa817d9bc09920068587c68d4b 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 23-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 LT40_RS12600 a76299aa817d9bc09920068587c68d4b 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 122 1.6E-40 T 23-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 LT40_RS12600 a76299aa817d9bc09920068587c68d4b 124 Gene3D G3DSA:1.20.1300.10 2 124 5.4E-40 T 23-04-2016 LT40_RS12600 a76299aa817d9bc09920068587c68d4b 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 118 1.0E-30 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 LT40_RS12600 a76299aa817d9bc09920068587c68d4b 124 SUPERFAMILY SSF81343 2 124 1.54E-34 T 23-04-2016 LT40_RS14650 15527586163ae659ad284c2b35927180 66 Gene3D G3DSA:3.10.20.30 1 66 7.2E-26 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS14650 15527586163ae659ad284c2b35927180 66 PANTHER PTHR34472:SF1 1 66 1.6E-23 T 23-04-2016 LT40_RS14650 15527586163ae659ad284c2b35927180 66 Pfam PF02597 ThiS family 3 66 2.5E-15 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 LT40_RS14650 15527586163ae659ad284c2b35927180 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.5E-22 T 23-04-2016 IPR010035 ThiS, thiamine-biosynthesis LT40_RS14650 15527586163ae659ad284c2b35927180 66 SUPERFAMILY SSF54285 1 66 2.91E-18 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LT40_RS14650 15527586163ae659ad284c2b35927180 66 PANTHER PTHR34472 1 66 1.6E-23 T 23-04-2016 LT40_RS00925 5821e69ff38fc0113b548b0d0a90b4e8 359 Pfam PF17186 Lipocalin-like domain 237 359 1.5E-41 T 23-04-2016 IPR033451 AttH, lipocalin-like domain LT40_RS00925 5821e69ff38fc0113b548b0d0a90b4e8 359 Pfam PF07143 CrtC N-terminal lipocalin domain 62 234 2.8E-55 T 23-04-2016 IPR010791 AttH domain LT40_RS00925 5821e69ff38fc0113b548b0d0a90b4e8 359 PANTHER PTHR38591 39 359 1.4E-92 T 23-04-2016 LT40_RS00925 5821e69ff38fc0113b548b0d0a90b4e8 359 SUPERFAMILY SSF159245 39 359 4.05E-105 T 23-04-2016 LT40_RS00925 5821e69ff38fc0113b548b0d0a90b4e8 359 Gene3D G3DSA:2.40.370.10 239 359 5.0E-42 T 23-04-2016 IPR023374 AttH-like domain LT40_RS00925 5821e69ff38fc0113b548b0d0a90b4e8 359 Gene3D G3DSA:2.40.370.10 50 236 9.0E-73 T 23-04-2016 IPR023374 AttH-like domain LT40_RS16400 aeaf7658df8d548810ce4b6cbed3cef4 229 Pfam PF00072 Response regulator receiver domain 6 117 2.8E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS16400 aeaf7658df8d548810ce4b6cbed3cef4 229 PANTHER PTHR26402 4 225 4.6E-142 T 23-04-2016 LT40_RS16400 aeaf7658df8d548810ce4b6cbed3cef4 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 226 1.4E-108 T 23-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 LT40_RS16400 aeaf7658df8d548810ce4b6cbed3cef4 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 6.8E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS16400 aeaf7658df8d548810ce4b6cbed3cef4 229 SUPERFAMILY SSF52172 2 183 5.12E-44 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS16400 aeaf7658df8d548810ce4b6cbed3cef4 229 SMART SM00862 151 225 7.6E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS16400 aeaf7658df8d548810ce4b6cbed3cef4 229 Gene3D G3DSA:3.40.50.2300 3 124 1.9E-42 T 23-04-2016 LT40_RS16400 aeaf7658df8d548810ce4b6cbed3cef4 229 Gene3D G3DSA:1.10.10.10 130 227 3.1E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16400 aeaf7658df8d548810ce4b6cbed3cef4 229 SMART SM00448 4 117 3.7E-45 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS16400 aeaf7658df8d548810ce4b6cbed3cef4 229 PANTHER PTHR26402:SF576 4 225 4.6E-142 T 23-04-2016 LT40_RS00100 1f1f4263f029c041f30d649a36b9de4e 281 Pfam PF11231 Protein of unknown function (DUF3034) 24 278 3.6E-105 T 23-04-2016 IPR021393 Protein of unknown function DUF3034 LT40_RS07655 a88189aa1a5ea15b90dcfd427066154d 263 PANTHER PTHR35841 47 263 9.8E-36 T 23-04-2016 LT40_RS07655 a88189aa1a5ea15b90dcfd427066154d 263 SUPERFAMILY SSF53850 90 224 3.26E-9 T 23-04-2016 LT40_RS07655 a88189aa1a5ea15b90dcfd427066154d 263 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 92 228 1.4E-13 T 23-04-2016 LT40_RS07655 a88189aa1a5ea15b90dcfd427066154d 263 PANTHER PTHR35841:SF2 47 263 9.8E-36 T 23-04-2016 LT40_RS07960 d80a45b660c65745da059f7925902edb 516 SMART SM00065 40 188 2.9E-6 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS07960 d80a45b660c65745da059f7925902edb 516 SUPERFAMILY SSF55781 40 181 8.51E-16 T 23-04-2016 IPR029016 GAF domain-like LT40_RS07960 d80a45b660c65745da059f7925902edb 516 SUPERFAMILY SSF55874 396 514 8.38E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS07960 d80a45b660c65745da059f7925902edb 516 Pfam PF13185 GAF domain 40 179 2.9E-13 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS07960 d80a45b660c65745da059f7925902edb 516 Gene3D G3DSA:3.30.450.40 20 180 7.1E-26 T 23-04-2016 IPR029016 GAF domain-like LT40_RS07960 d80a45b660c65745da059f7925902edb 516 Gene3D G3DSA:3.30.450.20 195 306 2.0E-16 T 23-04-2016 LT40_RS07960 d80a45b660c65745da059f7925902edb 516 Pfam PF07568 Histidine kinase 333 406 5.0E-19 T 23-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain LT40_RS07960 d80a45b660c65745da059f7925902edb 516 SMART SM00387 425 516 3.9E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS07960 d80a45b660c65745da059f7925902edb 516 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 430 515 1.7E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS07960 d80a45b660c65745da059f7925902edb 516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 198 312 4.5E-8 T 23-04-2016 IPR000014 PAS domain LT40_RS07960 d80a45b660c65745da059f7925902edb 516 Pfam PF08448 PAS fold 198 307 2.8E-18 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS07960 d80a45b660c65745da059f7925902edb 516 Gene3D G3DSA:3.30.565.10 391 515 5.9E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS07960 d80a45b660c65745da059f7925902edb 516 PANTHER PTHR24423 1 22 4.1E-30 T 23-04-2016 LT40_RS07960 d80a45b660c65745da059f7925902edb 516 PANTHER PTHR24423 190 490 4.1E-30 T 23-04-2016 LT40_RS07960 d80a45b660c65745da059f7925902edb 516 PANTHER PTHR24423:SF468 1 22 4.1E-30 T 23-04-2016 LT40_RS07960 d80a45b660c65745da059f7925902edb 516 PANTHER PTHR24423:SF468 190 490 4.1E-30 T 23-04-2016 LT40_RS07960 d80a45b660c65745da059f7925902edb 516 SUPERFAMILY SSF55785 197 306 1.31E-15 T 23-04-2016 IPR000014 PAS domain LT40_RS07110 7af9b5e7c86fae951b4119b6ab4e425f 344 PANTHER PTHR24220 44 274 2.2E-138 T 23-04-2016 LT40_RS07110 7af9b5e7c86fae951b4119b6ab4e425f 344 PANTHER PTHR24220 9 19 2.2E-138 T 23-04-2016 LT40_RS07110 7af9b5e7c86fae951b4119b6ab4e425f 344 SUPERFAMILY SSF52540 46 272 1.63E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07110 7af9b5e7c86fae951b4119b6ab4e425f 344 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 40 285 9.6E-110 T 23-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 LT40_RS07110 7af9b5e7c86fae951b4119b6ab4e425f 344 Gene3D G3DSA:3.10.580.10 298 342 9.4E-5 T 23-04-2016 LT40_RS07110 7af9b5e7c86fae951b4119b6ab4e425f 344 Gene3D G3DSA:3.40.50.300 7 268 6.1E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07110 7af9b5e7c86fae951b4119b6ab4e425f 344 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS07110 7af9b5e7c86fae951b4119b6ab4e425f 344 Pfam PF00005 ABC transporter 49 195 2.8E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS07110 7af9b5e7c86fae951b4119b6ab4e425f 344 PANTHER PTHR24220:SF374 44 274 2.2E-138 T 23-04-2016 LT40_RS07110 7af9b5e7c86fae951b4119b6ab4e425f 344 PANTHER PTHR24220:SF374 9 19 2.2E-138 T 23-04-2016 LT40_RS07110 7af9b5e7c86fae951b4119b6ab4e425f 344 SMART SM00382 56 253 1.3E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS17120 df2d8ae947c7a8c760a3582ad5af550b 666 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 18 503 7.3E-177 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 LT40_RS17120 df2d8ae947c7a8c760a3582ad5af550b 666 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 56 504 2.0E-154 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 LT40_RS17120 df2d8ae947c7a8c760a3582ad5af550b 666 PANTHER PTHR30047 13 666 0.0 T 23-04-2016 LT40_RS17120 df2d8ae947c7a8c760a3582ad5af550b 666 ProSitePatterns PS01303 BCCT family of transporters signature. 319 328 - T 23-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 LT40_RS17120 df2d8ae947c7a8c760a3582ad5af550b 666 PANTHER PTHR30047:SF6 13 666 0.0 T 23-04-2016 LT40_RS17130 661fefcf9f5a5cc8a2c84980c8789093 595 Gene3D G3DSA:3.30.450.90 189 314 2.9E-44 T 23-04-2016 LT40_RS17130 661fefcf9f5a5cc8a2c84980c8789093 595 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 409 423 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LT40_RS17130 661fefcf9f5a5cc8a2c84980c8789093 595 PANTHER PTHR30258 15 595 9.3E-281 T 23-04-2016 LT40_RS17130 661fefcf9f5a5cc8a2c84980c8789093 595 SUPERFAMILY SSF160246 55 168 2.62E-11 T 23-04-2016 LT40_RS17130 661fefcf9f5a5cc8a2c84980c8789093 595 SUPERFAMILY SSF52540 202 589 4.37E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17130 661fefcf9f5a5cc8a2c84980c8789093 595 Gene3D G3DSA:3.40.50.300 319 592 4.2E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17130 661fefcf9f5a5cc8a2c84980c8789093 595 PANTHER PTHR30258:SF13 15 595 9.3E-281 T 23-04-2016 LT40_RS17130 661fefcf9f5a5cc8a2c84980c8789093 595 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 71 172 5.4E-14 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 LT40_RS17130 661fefcf9f5a5cc8a2c84980c8789093 595 SMART SM00382 342 463 3.6E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS17130 661fefcf9f5a5cc8a2c84980c8789093 595 Pfam PF00437 Type II/IV secretion system protein 221 481 6.1E-72 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LT40_RS05445 0f701cb3fa80493797580cb249cb8fd1 315 PANTHER PTHR30126:SF19 5 307 5.8E-143 T 23-04-2016 LT40_RS05445 0f701cb3fa80493797580cb249cb8fd1 315 Gene3D G3DSA:1.10.10.10 7 87 2.0E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05445 0f701cb3fa80493797580cb249cb8fd1 315 Gene3D G3DSA:3.40.190.10 88 191 3.6E-8 T 23-04-2016 LT40_RS05445 0f701cb3fa80493797580cb249cb8fd1 315 PANTHER PTHR30126 5 307 5.8E-143 T 23-04-2016 LT40_RS05445 0f701cb3fa80493797580cb249cb8fd1 315 Pfam PF03466 LysR substrate binding domain 92 290 8.0E-26 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS05445 0f701cb3fa80493797580cb249cb8fd1 315 SUPERFAMILY SSF46785 5 106 1.08E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05445 0f701cb3fa80493797580cb249cb8fd1 315 SUPERFAMILY SSF53850 93 292 7.91E-28 T 23-04-2016 LT40_RS05445 0f701cb3fa80493797580cb249cb8fd1 315 Gene3D G3DSA:3.40.190.10 192 260 3.0E-6 T 23-04-2016 LT40_RS05445 0f701cb3fa80493797580cb249cb8fd1 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.9E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01260 ac36750c6926eb6eedfd2512db0f49a9 185 PANTHER PTHR35562 1 185 2.6E-77 T 23-04-2016 LT40_RS01260 ac36750c6926eb6eedfd2512db0f49a9 185 SUPERFAMILY SSF160443 93 176 1.26E-16 T 23-04-2016 IPR002625 Smr domain LT40_RS01260 ac36750c6926eb6eedfd2512db0f49a9 185 PANTHER PTHR35562:SF2 1 185 2.6E-77 T 23-04-2016 LT40_RS01260 ac36750c6926eb6eedfd2512db0f49a9 185 Pfam PF01713 Smr domain 95 176 4.0E-22 T 23-04-2016 IPR002625 Smr domain LT40_RS01260 ac36750c6926eb6eedfd2512db0f49a9 185 SMART SM00463 92 176 5.3E-7 T 23-04-2016 IPR002625 Smr domain LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 SUPERFAMILY SSF56037 336 418 3.14E-15 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 SUPERFAMILY SSF52402 26 234 2.43E-60 T 23-04-2016 LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 Pfam PF11734 TilS substrate C-terminal domain 364 418 6.5E-15 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 PANTHER PTHR11807 29 239 5.2E-68 T 23-04-2016 LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 28 204 7.5E-48 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 Gene3D G3DSA:3.40.50.620 8 181 3.6E-13 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 PANTHER PTHR11807:SF2 29 239 5.2E-68 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 Pfam PF09179 TilS substrate binding domain 256 321 5.0E-9 T 23-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 11 395 22.233 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 SUPERFAMILY SSF82829 253 327 1.83E-14 T 23-04-2016 LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 SMART SM00977 363 427 4.3E-15 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 Pfam PF01171 PP-loop family 28 200 1.0E-51 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal LT40_RS00495 f475441019bd8fc89ace373caac95eae 429 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 364 406 7.4E-12 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LT40_RS05620 ba24e28a3d7dfa4f44a9a0d475d9a5cd 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 187 1.7E-32 T 23-04-2016 LT40_RS05620 ba24e28a3d7dfa4f44a9a0d475d9a5cd 217 Gene3D G3DSA:3.40.50.1000 81 217 1.0E-44 T 23-04-2016 IPR023214 HAD-like domain LT40_RS05620 ba24e28a3d7dfa4f44a9a0d475d9a5cd 217 Gene3D G3DSA:1.20.1440.100 15 80 7.3E-21 T 23-04-2016 LT40_RS05620 ba24e28a3d7dfa4f44a9a0d475d9a5cd 217 PANTHER PTHR10000 42 213 5.3E-80 T 23-04-2016 LT40_RS05620 ba24e28a3d7dfa4f44a9a0d475d9a5cd 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 200 2.0E-47 T 23-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial LT40_RS05620 ba24e28a3d7dfa4f44a9a0d475d9a5cd 217 PANTHER PTHR10000:SF17 42 213 5.3E-80 T 23-04-2016 LT40_RS05620 ba24e28a3d7dfa4f44a9a0d475d9a5cd 217 SUPERFAMILY SSF56784 2 211 2.9E-28 T 23-04-2016 IPR023214 HAD-like domain LT40_RS05620 ba24e28a3d7dfa4f44a9a0d475d9a5cd 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 189 8.4E-29 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 LT40_RS13270 bf75ea29e95a85e06fb24f31a7d55925 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS13270 bf75ea29e95a85e06fb24f31a7d55925 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS13270 bf75ea29e95a85e06fb24f31a7d55925 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS13270 bf75ea29e95a85e06fb24f31a7d55925 305 Gene3D G3DSA:3.40.190.10 98 196 1.6E-27 T 23-04-2016 LT40_RS13270 bf75ea29e95a85e06fb24f31a7d55925 305 Pfam PF03466 LysR substrate binding domain 92 301 2.8E-33 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS13270 bf75ea29e95a85e06fb24f31a7d55925 305 SUPERFAMILY SSF46785 12 88 1.07E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13270 bf75ea29e95a85e06fb24f31a7d55925 305 SUPERFAMILY SSF53850 95 302 5.25E-32 T 23-04-2016 LT40_RS13270 bf75ea29e95a85e06fb24f31a7d55925 305 Gene3D G3DSA:1.10.10.10 12 87 1.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13270 bf75ea29e95a85e06fb24f31a7d55925 305 PANTHER PTHR30537 12 302 2.3E-76 T 23-04-2016 LT40_RS13270 bf75ea29e95a85e06fb24f31a7d55925 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 1.3E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS13270 bf75ea29e95a85e06fb24f31a7d55925 305 PANTHER PTHR30537:SF26 12 302 2.3E-76 T 23-04-2016 LT40_RS19230 b1af77769e330ae3bee421f9b021e446 223 Gene3D G3DSA:1.10.357.10 82 218 2.7E-29 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS19230 b1af77769e330ae3bee421f9b021e446 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 43 3.0E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS19230 b1af77769e330ae3bee421f9b021e446 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 51 74 3.0E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS19230 b1af77769e330ae3bee421f9b021e446 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 76 2.6E-14 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS19230 b1af77769e330ae3bee421f9b021e446 223 SUPERFAMILY SSF48498 96 221 5.26E-33 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LT40_RS19230 b1af77769e330ae3bee421f9b021e446 223 Gene3D G3DSA:1.10.10.60 15 59 5.2E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS19230 b1af77769e330ae3bee421f9b021e446 223 PANTHER PTHR30328 3 221 2.5E-96 T 23-04-2016 LT40_RS19230 b1af77769e330ae3bee421f9b021e446 223 SUPERFAMILY SSF46689 16 99 1.33E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS19230 b1af77769e330ae3bee421f9b021e446 223 Gene3D G3DSA:1.10.10.60 60 81 5.2E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS19230 b1af77769e330ae3bee421f9b021e446 223 PANTHER PTHR30328:SF16 3 221 2.5E-96 T 23-04-2016 LT40_RS05150 5e29492bb0c08274fa0e85b087a5eb90 321 Pfam PF09084 NMT1/THI5 like 58 254 1.9E-12 T 23-04-2016 IPR015168 SsuA/THI5-like LT40_RS05150 5e29492bb0c08274fa0e85b087a5eb90 321 SMART SM00062 32 250 6.9E-20 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS05150 5e29492bb0c08274fa0e85b087a5eb90 321 SUPERFAMILY SSF53850 31 271 1.55E-42 T 23-04-2016 LT40_RS05150 5e29492bb0c08274fa0e85b087a5eb90 321 PANTHER PTHR30024 10 319 3.6E-110 T 23-04-2016 LT40_RS05150 5e29492bb0c08274fa0e85b087a5eb90 321 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 33 311 1.1E-59 T 23-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 LT40_RS05150 5e29492bb0c08274fa0e85b087a5eb90 321 PANTHER PTHR30024:SF11 10 319 3.6E-110 T 23-04-2016 LT40_RS05150 5e29492bb0c08274fa0e85b087a5eb90 321 Gene3D G3DSA:3.40.190.10 115 238 6.3E-26 T 23-04-2016 LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 324 3.6E-118 T 23-04-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 185 302 7.7E-22 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 PANTHER PTHR11811:SF28 1 325 2.0E-154 T 23-04-2016 LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 Gene3D G3DSA:3.40.50.720 1 186 7.3E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 SUPERFAMILY SSF51735 1 160 5.77E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 SUPERFAMILY SSF48179 183 306 9.52E-39 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 PANTHER PTHR11811 1 325 2.0E-154 T 23-04-2016 LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 153 2.2E-41 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 174 202 1.5E-17 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 258 285 1.5E-17 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 1.5E-17 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 SMART SM01350 185 324 1.8E-5 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 LT40_RS11030 783289c94f3ccfafc7783a3a80392c2e 325 Gene3D G3DSA:1.10.1040.10 187 303 4.5E-35 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS00680 7dcbc96205d5a99639ca90e6ea30de66 332 SUPERFAMILY SSF52096 76 190 8.8E-39 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS00680 7dcbc96205d5a99639ca90e6ea30de66 332 SUPERFAMILY SSF52096 219 281 8.8E-39 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS00680 7dcbc96205d5a99639ca90e6ea30de66 332 Gene3D G3DSA:3.90.226.10 50 182 6.2E-46 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS00680 7dcbc96205d5a99639ca90e6ea30de66 332 Gene3D G3DSA:3.90.226.10 220 307 6.2E-46 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS00680 7dcbc96205d5a99639ca90e6ea30de66 332 PANTHER PTHR30341 2 329 9.0E-126 T 23-04-2016 LT40_RS00680 7dcbc96205d5a99639ca90e6ea30de66 332 Pfam PF01343 Peptidase family S49 147 286 1.8E-29 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 LT40_RS00680 7dcbc96205d5a99639ca90e6ea30de66 332 PANTHER PTHR30341:SF1 2 329 9.0E-126 T 23-04-2016 LT40_RS11480 0680cdc1fa8f2b2a8094f391c475f702 416 Pfam PF07690 Major Facilitator Superfamily 34 346 5.2E-29 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS11480 0680cdc1fa8f2b2a8094f391c475f702 416 SUPERFAMILY SSF103473 22 405 9.55E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS11480 0680cdc1fa8f2b2a8094f391c475f702 416 Gene3D G3DSA:1.20.1250.20 226 397 6.7E-11 T 23-04-2016 LT40_RS11480 0680cdc1fa8f2b2a8094f391c475f702 416 Gene3D G3DSA:1.20.1250.20 30 208 2.2E-25 T 23-04-2016 LT40_RS11480 0680cdc1fa8f2b2a8094f391c475f702 416 PANTHER PTHR23501:SF28 16 400 1.3E-97 T 23-04-2016 LT40_RS11480 0680cdc1fa8f2b2a8094f391c475f702 416 PANTHER PTHR23501 16 400 1.3E-97 T 23-04-2016 LT40_RS02305 c48fc80df15eb73ffa6caff2ad78823b 233 Pfam PF13860 FlgD Ig-like domain 118 186 4.0E-22 T 23-04-2016 IPR025965 FlgD Ig-like domain LT40_RS02305 c48fc80df15eb73ffa6caff2ad78823b 233 PANTHER PTHR30435:SF15 17 219 1.2E-50 T 23-04-2016 LT40_RS02305 c48fc80df15eb73ffa6caff2ad78823b 233 Pfam PF03963 Flagellar hook capping protein - N-terminal region 17 84 2.3E-21 T 23-04-2016 IPR005648 Flagellar hook capping protein LT40_RS02305 c48fc80df15eb73ffa6caff2ad78823b 233 PANTHER PTHR30435 17 219 1.2E-50 T 23-04-2016 LT40_RS02305 c48fc80df15eb73ffa6caff2ad78823b 233 Pfam PF13861 FlgD Tudor-like domain 93 229 3.3E-18 T 23-04-2016 IPR025963 FlgD Tudor-like domain LT40_RS00930 9a8e123e60f472cf35dde1957986fe0d 823 PANTHER PTHR30489:SF6 3 188 6.5E-172 T 23-04-2016 LT40_RS00930 9a8e123e60f472cf35dde1957986fe0d 823 Pfam PF02687 FtsX-like permease family 694 812 6.6E-9 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LT40_RS00930 9a8e123e60f472cf35dde1957986fe0d 823 Pfam PF02687 FtsX-like permease family 245 367 3.5E-8 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LT40_RS00930 9a8e123e60f472cf35dde1957986fe0d 823 Pfam PF12704 MacB-like periplasmic core domain 464 660 2.9E-9 T 23-04-2016 IPR025857 MacB-like periplasmic core domain LT40_RS00930 9a8e123e60f472cf35dde1957986fe0d 823 PANTHER PTHR30489 216 819 6.5E-172 T 23-04-2016 LT40_RS00930 9a8e123e60f472cf35dde1957986fe0d 823 PANTHER PTHR30489 3 188 6.5E-172 T 23-04-2016 LT40_RS00930 9a8e123e60f472cf35dde1957986fe0d 823 PANTHER PTHR30489:SF6 216 819 6.5E-172 T 23-04-2016 LT40_RS10565 d8858c7810803c525107f3f769ee342e 358 SUPERFAMILY SSF51658 13 327 7.88E-62 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS10565 d8858c7810803c525107f3f769ee342e 358 PANTHER PTHR12110:SF17 104 307 6.1E-28 T 23-04-2016 LT40_RS10565 d8858c7810803c525107f3f769ee342e 358 PANTHER PTHR12110:SF17 13 85 6.1E-28 T 23-04-2016 LT40_RS10565 d8858c7810803c525107f3f769ee342e 358 Pfam PF07582 AP endonuclease family 2 C terminus 285 339 1.9E-20 T 23-04-2016 IPR011418 AP endonuclease, family 2, C-terminal LT40_RS10565 d8858c7810803c525107f3f769ee342e 358 PANTHER PTHR12110 104 307 6.1E-28 T 23-04-2016 LT40_RS10565 d8858c7810803c525107f3f769ee342e 358 PANTHER PTHR12110 13 85 6.1E-28 T 23-04-2016 LT40_RS10565 d8858c7810803c525107f3f769ee342e 358 Pfam PF01261 Xylose isomerase-like TIM barrel 34 284 2.6E-37 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS10565 d8858c7810803c525107f3f769ee342e 358 Gene3D G3DSA:3.20.20.150 14 328 1.3E-68 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS16495 147f2fedbc698e2eae2d1c8f3340d7bb 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 9.0E-40 T 23-04-2016 IPR013527 YicC-like, N-terminal LT40_RS16495 147f2fedbc698e2eae2d1c8f3340d7bb 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 1.4E-34 T 23-04-2016 IPR013551 Domain of unknown function DUF1732 LT40_RS16495 147f2fedbc698e2eae2d1c8f3340d7bb 287 PANTHER PTHR30636 1 287 4.5E-101 T 23-04-2016 LT40_RS16495 147f2fedbc698e2eae2d1c8f3340d7bb 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 3.2E-89 T 23-04-2016 IPR005229 Conserved hypothetical protein CHP00255 LT40_RS00955 623a87224b82f877eacb000422b3873a 335 SUPERFAMILY SSF55347 132 318 1.09E-47 T 23-04-2016 LT40_RS00955 623a87224b82f877eacb000422b3873a 335 Gene3D G3DSA:3.30.360.10 145 313 1.6E-49 T 23-04-2016 LT40_RS00955 623a87224b82f877eacb000422b3873a 335 SUPERFAMILY SSF51735 5 155 1.1E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS00955 623a87224b82f877eacb000422b3873a 335 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 117 2.6E-25 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LT40_RS00955 623a87224b82f877eacb000422b3873a 335 PANTHER PTHR10174:SF2 58 332 9.5E-32 T 23-04-2016 LT40_RS00955 623a87224b82f877eacb000422b3873a 335 PANTHER PTHR10174 58 332 9.5E-32 T 23-04-2016 LT40_RS00955 623a87224b82f877eacb000422b3873a 335 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 317 8.4E-38 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS00955 623a87224b82f877eacb000422b3873a 335 SMART SM00859 6 120 6.8E-27 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LT40_RS00955 623a87224b82f877eacb000422b3873a 335 PIRSF PIRSF000148 4 335 3.6E-86 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS00955 623a87224b82f877eacb000422b3873a 335 Gene3D G3DSA:3.40.50.720 3 144 1.3E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS00760 bfa51e9c83e507030396b0e8236218c9 200 Pfam PF16105 Domain of unknown function (DUF4823) 48 195 1.8E-56 T 23-04-2016 IPR032248 Protein of unknown function DUF4823 LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 663 0.0 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 Pfam PF02780 Transketolase, C-terminal domain 540 655 1.9E-17 T 23-04-2016 IPR033248 Transketolase, C-terminal domain LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 SUPERFAMILY SSF52518 347 526 1.49E-68 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 Gene3D G3DSA:3.40.50.920 538 664 2.1E-49 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 Gene3D G3DSA:3.40.50.970 326 531 2.8E-80 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 SUPERFAMILY SSF52518 5 328 2.41E-119 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 SUPERFAMILY SSF52922 533 664 8.51E-43 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 Gene3D G3DSA:3.40.50.970 5 321 1.8E-129 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 PANTHER PTHR11624 1 309 0.0 T 23-04-2016 IPR033247 Transketolase family LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 PANTHER PTHR11624 328 664 0.0 T 23-04-2016 IPR033247 Transketolase family LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 PANTHER PTHR11624:SF1 1 309 0.0 T 23-04-2016 LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 PANTHER PTHR11624:SF1 328 664 0.0 T 23-04-2016 LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 333 3.0E-161 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 SMART SM00861 354 525 6.1E-71 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS17330 f02d0e2eed152995ba0a86f876c9fb63 665 Pfam PF02779 Transketolase, pyrimidine binding domain 353 525 1.2E-46 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 SUPERFAMILY SSF46894 141 205 2.58E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 SMART SM00448 2 114 1.4E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 SUPERFAMILY SSF52172 1 118 2.28E-29 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 Gene3D G3DSA:1.10.10.10 148 207 4.6E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.8E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.8E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.8E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 SMART SM00421 145 202 9.9E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 Gene3D G3DSA:3.40.50.2300 3 147 9.7E-31 T 23-04-2016 LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 PANTHER PTHR26402:SF151 2 205 1.1E-52 T 23-04-2016 LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 Pfam PF00072 Response regulator receiver domain 5 114 4.2E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 PANTHER PTHR26402 2 205 1.1E-52 T 23-04-2016 LT40_RS10845 f13a989c4615255942e2e5c4b453316e 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 1.5E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS07165 ce050cd7d7867f7a3daba11f1a467485 321 PANTHER PTHR33607 47 231 1.2E-30 T 23-04-2016 LT40_RS07165 ce050cd7d7867f7a3daba11f1a467485 321 SUPERFAMILY SSF54060 22 233 3.41E-79 T 23-04-2016 LT40_RS07165 ce050cd7d7867f7a3daba11f1a467485 321 Pfam PF04231 Endonuclease I 25 232 6.7E-48 T 23-04-2016 IPR007346 Endonuclease I GO:0004518 LT40_RS07165 ce050cd7d7867f7a3daba11f1a467485 321 Gene3D G3DSA:3.40.10.10 270 321 1.5E-6 T 23-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LT40_RS07165 ce050cd7d7867f7a3daba11f1a467485 321 SUPERFAMILY SSF57884 273 321 1.96E-6 T 23-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PANTHER PTHR24423:SF485 187 295 1.2E-81 T 23-04-2016 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PIRSF PIRSF036431 1 584 2.3E-172 T 23-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PANTHER PTHR24423 358 583 1.2E-81 T 23-04-2016 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PANTHER PTHR24423 187 295 1.2E-81 T 23-04-2016 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 SUPERFAMILY SSF55874 433 579 4.85E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 SMART SM00388 362 430 0.0068 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PANTHER PTHR24423:SF485 83 102 1.2E-81 T 23-04-2016 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PANTHER PTHR24423:SF485 4 16 1.2E-81 T 23-04-2016 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PANTHER PTHR24423:SF485 358 583 1.2E-81 T 23-04-2016 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 472 580 6.2E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 SUPERFAMILY SSF103190 108 192 1.28E-13 T 23-04-2016 IPR029151 Periplasmic sensor domain-like LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PANTHER PTHR24423 83 102 1.2E-81 T 23-04-2016 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PANTHER PTHR24423 4 16 1.2E-81 T 23-04-2016 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 SUPERFAMILY SSF47384 358 427 3.73E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PANTHER PTHR24423 321 337 1.2E-81 T 23-04-2016 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 SMART SM00387 472 581 6.6E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 Gene3D G3DSA:3.30.565.10 434 579 4.2E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PANTHER PTHR24423:SF485 321 337 1.2E-81 T 23-04-2016 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 560 5.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 539 5.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 5.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04435 6a78316bcf3b6d63345c213551c49404 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 5.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS18830 47e8cac5560bfbc865c795eed9e4795e 91 Gene3D G3DSA:3.30.70.1460 5 91 1.3E-24 T 23-04-2016 IPR027471 YbeD-like domain LT40_RS18830 47e8cac5560bfbc865c795eed9e4795e 91 PANTHER PTHR38036:SF1 1 91 5.0E-21 T 23-04-2016 LT40_RS18830 47e8cac5560bfbc865c795eed9e4795e 91 SUPERFAMILY SSF117991 5 91 3.79E-21 T 23-04-2016 IPR027471 YbeD-like domain LT40_RS18830 47e8cac5560bfbc865c795eed9e4795e 91 Pfam PF04359 Protein of unknown function (DUF493) 9 91 2.3E-22 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 LT40_RS18830 47e8cac5560bfbc865c795eed9e4795e 91 PANTHER PTHR38036 1 91 5.0E-21 T 23-04-2016 LT40_RS18830 47e8cac5560bfbc865c795eed9e4795e 91 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 3 91 20.642 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 SMART SM01008 18 132 5.4E-36 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 Gene3D G3DSA:3.30.365.10 347 436 2.0E-57 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 Gene3D G3DSA:3.30.365.10 599 728 2.0E-57 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 SUPERFAMILY SSF56003 144 728 7.2E-160 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 SUPERFAMILY SSF54665 3 140 9.03E-36 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 130 4.5E-21 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 Gene3D G3DSA:3.30.365.10 437 598 1.6E-28 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 PANTHER PTHR11908 4 729 3.0E-294 T 23-04-2016 LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 Gene3D G3DSA:3.90.1170.50 2 119 8.4E-34 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 154 671 2.8E-109 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 Gene3D G3DSA:3.30.365.10 274 297 1.6E-4 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 Gene3D G3DSA:3.30.365.10 120 166 1.6E-4 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 Gene3D G3DSA:3.30.365.10 167 272 1.3E-32 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS19260 84d61bc69dbafdcadf25109b28076308 729 PANTHER PTHR11908:SF71 4 729 3.0E-294 T 23-04-2016 LT40_RS08440 3c753562fac6726c4c3508f49209a50a 315 PANTHER PTHR22916:SF35 88 167 6.2E-44 T 23-04-2016 LT40_RS08440 3c753562fac6726c4c3508f49209a50a 315 PANTHER PTHR22916:SF35 11 68 6.2E-44 T 23-04-2016 LT40_RS08440 3c753562fac6726c4c3508f49209a50a 315 PANTHER PTHR22916:SF35 184 266 6.2E-44 T 23-04-2016 LT40_RS08440 3c753562fac6726c4c3508f49209a50a 315 Pfam PF00535 Glycosyl transferase family 2 11 150 2.5E-8 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS08440 3c753562fac6726c4c3508f49209a50a 315 SUPERFAMILY SSF53448 6 267 4.5E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS08440 3c753562fac6726c4c3508f49209a50a 315 PANTHER PTHR22916 88 167 6.2E-44 T 23-04-2016 LT40_RS08440 3c753562fac6726c4c3508f49209a50a 315 PANTHER PTHR22916 11 68 6.2E-44 T 23-04-2016 LT40_RS08440 3c753562fac6726c4c3508f49209a50a 315 PANTHER PTHR22916 184 266 6.2E-44 T 23-04-2016 LT40_RS08440 3c753562fac6726c4c3508f49209a50a 315 Gene3D G3DSA:3.90.550.10 11 266 5.8E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS01535 cca54d78ae45c3399c7a711b666b7abf 195 PANTHER PTHR30086 1 185 4.2E-45 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS01535 cca54d78ae45c3399c7a711b666b7abf 195 Pfam PF01810 LysE type translocator 15 194 1.4E-25 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS01535 cca54d78ae45c3399c7a711b666b7abf 195 PANTHER PTHR30086:SF12 1 185 4.2E-45 T 23-04-2016 LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 SUPERFAMILY SSF51735 5 256 1.04E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 6.9E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 PANTHER PTHR24322 11 137 5.8E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 PANTHER PTHR24322 153 184 5.8E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 Gene3D G3DSA:3.40.50.720 1 255 1.5E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 4.3E-52 T 23-04-2016 LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.9E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 5.9E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10595 d14b67ba8c2fcd6387cdabcfaa8bc265 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.9E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 276 366 1.5E-24 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 SUPERFAMILY SSF56601 8 276 4.13E-90 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 SUPERFAMILY SSF69189 276 368 8.63E-25 T 23-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 Gene3D G3DSA:2.60.410.10 276 366 1.7E-27 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 255 3.5E-86 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 PANTHER PTHR21581 16 377 8.7E-129 T 23-04-2016 LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 SMART SM00936 276 366 3.8E-33 T 23-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 Gene3D G3DSA:3.40.710.10 29 275 2.8E-103 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 1.3E-16 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 1.3E-16 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 1.3E-16 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LT40_RS18825 56ae5302ec103fd89aaf18ab17d25010 386 PANTHER PTHR21581:SF4 16 377 8.7E-129 T 23-04-2016 LT40_RS07855 9cf450677746596e310ad81847e24312 227 Pfam PF03737 Demethylmenaquinone methyltransferase 28 174 2.3E-45 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS07855 9cf450677746596e310ad81847e24312 227 PANTHER PTHR33254:SF5 1 212 4.8E-66 T 23-04-2016 LT40_RS07855 9cf450677746596e310ad81847e24312 227 SUPERFAMILY SSF89562 24 185 2.09E-48 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS07855 9cf450677746596e310ad81847e24312 227 PANTHER PTHR33254 1 212 4.8E-66 T 23-04-2016 LT40_RS07855 9cf450677746596e310ad81847e24312 227 Gene3D G3DSA:3.50.30.40 24 184 1.2E-52 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS14745 2600c5b38a64c19c645f8fb8a93a90e0 170 Pfam PF00186 Dihydrofolate reductase 7 169 8.8E-56 T 23-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LT40_RS14745 2600c5b38a64c19c645f8fb8a93a90e0 170 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 18 40 - T 23-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LT40_RS14745 2600c5b38a64c19c645f8fb8a93a90e0 170 Gene3D G3DSA:3.40.430.10 3 170 3.5E-59 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain LT40_RS14745 2600c5b38a64c19c645f8fb8a93a90e0 170 PANTHER PTHR22778 1 170 9.4E-47 T 23-04-2016 LT40_RS14745 2600c5b38a64c19c645f8fb8a93a90e0 170 SUPERFAMILY SSF53597 6 170 3.37E-57 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain LT40_RS14745 2600c5b38a64c19c645f8fb8a93a90e0 170 PANTHER PTHR22778:SF16 1 170 9.4E-47 T 23-04-2016 LT40_RS14745 2600c5b38a64c19c645f8fb8a93a90e0 170 PRINTS PR00070 Dihydrofolate reductase signature 18 28 1.5E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LT40_RS14745 2600c5b38a64c19c645f8fb8a93a90e0 170 PRINTS PR00070 Dihydrofolate reductase signature 32 40 1.5E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LT40_RS14745 2600c5b38a64c19c645f8fb8a93a90e0 170 PRINTS PR00070 Dihydrofolate reductase signature 45 56 1.5E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LT40_RS14745 2600c5b38a64c19c645f8fb8a93a90e0 170 PRINTS PR00070 Dihydrofolate reductase signature 102 116 1.5E-14 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LT40_RS14745 2600c5b38a64c19c645f8fb8a93a90e0 170 PIRSF PIRSF000194 1 170 2.6E-61 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 Pfam PF00591 Glycosyl transferase family, a/b domain 263 493 5.6E-15 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 SMART SM00941 525 592 2.3E-12 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 SUPERFAMILY SSF52418 257 512 4.06E-62 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 SUPERFAMILY SSF52540 4 192 7.02E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 Gene3D G3DSA:3.40.50.300 3 26 7.1E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 Gene3D G3DSA:3.40.50.300 76 147 7.1E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 SUPERFAMILY SSF54680 514 584 8.37E-13 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 PANTHER PTHR10515:SF0 167 586 3.4E-91 T 23-04-2016 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 4 179 2.3E-50 T 23-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 SMART SM00072 3 183 2.6E-4 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 SUPERFAMILY SSF47648 191 250 1.19E-7 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 Gene3D G3DSA:3.90.1170.30 513 585 3.1E-11 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 Pfam PF00625 Guanylate kinase 9 146 9.3E-6 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 297 312 - T 23-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 PANTHER PTHR10515 167 586 3.4E-91 T 23-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 Gene3D G3DSA:3.40.1030.10 257 512 2.3E-65 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 Pfam PF02885 Glycosyl transferase family, helical bundle domain 194 248 1.9E-6 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 3 180 32.107 T 23-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 Gene3D G3DSA:1.20.970.10 194 234 1.2E-6 T 23-04-2016 LT40_RS12355 c002a258bc4492a17a7c512b3b9cea4e 597 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 530 589 5.2E-7 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 PANTHER PTHR30376 3 279 1.4E-114 T 23-04-2016 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 PRINTS PR00046 Major sigma-70 factor signature 78 91 1.31E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 PRINTS PR00046 Major sigma-70 factor signature 233 245 1.31E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 1.31E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 1.31E-17 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 SUPERFAMILY SSF88659 197 282 1.7E-17 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 Pfam PF00140 Sigma-70 factor, region 1.2 17 40 1.2E-5 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 SUPERFAMILY SSF88946 15 123 1.44E-38 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 280 3.4E-31 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 283 9.7E-124 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 Gene3D G3DSA:1.10.10.10 225 280 4.7E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 Pfam PF04542 Sigma-70 region 2 55 123 2.4E-16 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 Gene3D G3DSA:1.10.601.10 16 123 2.7E-34 T 23-04-2016 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 Pfam PF04545 Sigma-70, region 4 229 279 2.5E-16 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS14665 f3fce82f29ff55b233ef18aecc4402b1 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 53.234 T 23-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 LT40_RS15755 8112bd62259b3626e8829db060d019c9 210 SUPERFAMILY SSF52833 50 206 1.63E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS15755 8112bd62259b3626e8829db060d019c9 210 PANTHER PTHR12151:SF0 5 207 1.8E-54 T 23-04-2016 LT40_RS15755 8112bd62259b3626e8829db060d019c9 210 Pfam PF02630 SCO1/SenC 54 185 1.5E-33 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC LT40_RS15755 8112bd62259b3626e8829db060d019c9 210 Gene3D G3DSA:3.40.30.10 12 208 6.1E-49 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS15755 8112bd62259b3626e8829db060d019c9 210 PANTHER PTHR12151 5 207 1.8E-54 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC LT40_RS20595 670700694cc5aa489217397ed7658e21 383 Pfam PF07687 Peptidase dimerisation domain 183 289 4.4E-27 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS20595 670700694cc5aa489217397ed7658e21 383 SUPERFAMILY SSF53187 300 382 7.93E-64 T 23-04-2016 LT40_RS20595 670700694cc5aa489217397ed7658e21 383 SUPERFAMILY SSF53187 6 186 7.93E-64 T 23-04-2016 LT40_RS20595 670700694cc5aa489217397ed7658e21 383 Gene3D G3DSA:3.30.70.360 196 296 2.8E-34 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS20595 670700694cc5aa489217397ed7658e21 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 143 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LT40_RS20595 670700694cc5aa489217397ed7658e21 383 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 11 381 2.4E-162 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 LT40_RS20595 670700694cc5aa489217397ed7658e21 383 Gene3D G3DSA:3.40.630.10 324 382 8.7E-69 T 23-04-2016 LT40_RS20595 670700694cc5aa489217397ed7658e21 383 Gene3D G3DSA:3.40.630.10 9 195 8.7E-69 T 23-04-2016 LT40_RS20595 670700694cc5aa489217397ed7658e21 383 PANTHER PTHR11014 9 382 9.1E-93 T 23-04-2016 LT40_RS20595 670700694cc5aa489217397ed7658e21 383 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 8 383 51.536 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 LT40_RS20595 670700694cc5aa489217397ed7658e21 383 PANTHER PTHR11014:SF106 9 382 9.1E-93 T 23-04-2016 LT40_RS20595 670700694cc5aa489217397ed7658e21 383 Pfam PF01546 Peptidase family M20/M25/M40 69 379 1.7E-42 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LT40_RS20595 670700694cc5aa489217397ed7658e21 383 SUPERFAMILY SSF55031 187 296 1.64E-29 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS01650 218ab79095d651ae8baf0f81e58cd60e 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 316 4.9E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS01650 218ab79095d651ae8baf0f81e58cd60e 341 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 332 4.9E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS01650 218ab79095d651ae8baf0f81e58cd60e 341 Pfam PF12833 Helix-turn-helix domain 256 333 2.0E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS01650 218ab79095d651ae8baf0f81e58cd60e 341 Gene3D G3DSA:1.10.10.60 285 335 3.0E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01650 218ab79095d651ae8baf0f81e58cd60e 341 PANTHER PTHR11019:SF52 248 340 1.5E-31 T 23-04-2016 LT40_RS01650 218ab79095d651ae8baf0f81e58cd60e 341 SMART SM00342 249 332 5.9E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS01650 218ab79095d651ae8baf0f81e58cd60e 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 26 205 5.5E-39 T 23-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal LT40_RS01650 218ab79095d651ae8baf0f81e58cd60e 341 SUPERFAMILY SSF46689 285 334 4.93E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01650 218ab79095d651ae8baf0f81e58cd60e 341 PANTHER PTHR11019 248 340 1.5E-31 T 23-04-2016 LT40_RS05495 f559146eef75b1a554fc51f46132804f 142 Gene3D G3DSA:3.10.450.50 24 141 9.0E-37 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS05495 f559146eef75b1a554fc51f46132804f 142 SUPERFAMILY SSF54427 24 139 4.85E-26 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS05495 f559146eef75b1a554fc51f46132804f 142 Pfam PF14534 Domain of unknown function (DUF4440) 28 133 6.7E-18 T 23-04-2016 IPR027843 Domain of unknown function DUF4440 LT40_RS18200 274186686db39f0e05f582fd2033eead 112 PRINTS PR00332 Histidine triad family signature 92 102 7.2E-21 T 23-04-2016 IPR001310 Histidine triad (HIT) protein LT40_RS18200 274186686db39f0e05f582fd2033eead 112 PRINTS PR00332 Histidine triad family signature 25 43 7.2E-21 T 23-04-2016 IPR001310 Histidine triad (HIT) protein LT40_RS18200 274186686db39f0e05f582fd2033eead 112 PRINTS PR00332 Histidine triad family signature 4 20 7.2E-21 T 23-04-2016 IPR001310 Histidine triad (HIT) protein LT40_RS18200 274186686db39f0e05f582fd2033eead 112 Pfam PF01230 HIT domain 11 106 1.2E-28 T 23-04-2016 IPR001310 Histidine triad (HIT) protein LT40_RS18200 274186686db39f0e05f582fd2033eead 112 PANTHER PTHR23089:SF3 2 112 2.3E-57 T 23-04-2016 LT40_RS18200 274186686db39f0e05f582fd2033eead 112 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 23-04-2016 IPR019808 Histidine triad, conserved site LT40_RS18200 274186686db39f0e05f582fd2033eead 112 PANTHER PTHR23089 2 112 2.3E-57 T 23-04-2016 IPR001310 Histidine triad (HIT) protein LT40_RS18200 274186686db39f0e05f582fd2033eead 112 SUPERFAMILY SSF54197 2 111 7.73E-39 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 LT40_RS18200 274186686db39f0e05f582fd2033eead 112 Gene3D G3DSA:3.30.428.10 2 112 2.2E-42 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 LT40_RS13305 c21bd843d2689b005dd3c5d8c7e767d9 231 SMART SM00418 9 88 1.3E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS13305 c21bd843d2689b005dd3c5d8c7e767d9 231 PANTHER PTHR39168 1 229 2.7E-50 T 23-04-2016 LT40_RS13305 c21bd843d2689b005dd3c5d8c7e767d9 231 PANTHER PTHR39168:SF1 1 229 2.7E-50 T 23-04-2016 LT40_RS13305 c21bd843d2689b005dd3c5d8c7e767d9 231 Gene3D G3DSA:1.10.10.10 7 88 2.0E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13305 c21bd843d2689b005dd3c5d8c7e767d9 231 SUPERFAMILY SSF46785 7 87 6.45E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13305 c21bd843d2689b005dd3c5d8c7e767d9 231 Pfam PF12840 Helix-turn-helix domain 9 68 7.1E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01715 62e56b98ed457ce85dba2e154c9c4c1b 436 Pfam PF07690 Major Facilitator Superfamily 19 381 2.1E-42 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS01715 62e56b98ed457ce85dba2e154c9c4c1b 436 Gene3D G3DSA:1.20.1250.20 11 210 7.2E-40 T 23-04-2016 LT40_RS01715 62e56b98ed457ce85dba2e154c9c4c1b 436 SUPERFAMILY SSF103473 7 418 7.19E-81 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS01715 62e56b98ed457ce85dba2e154c9c4c1b 436 PANTHER PTHR11662 7 423 1.4E-136 T 23-04-2016 LT40_RS01715 62e56b98ed457ce85dba2e154c9c4c1b 436 PANTHER PTHR11662:SF3 7 423 1.4E-136 T 23-04-2016 LT40_RS01715 62e56b98ed457ce85dba2e154c9c4c1b 436 Gene3D G3DSA:1.20.1250.20 235 416 9.3E-20 T 23-04-2016 LT40_RS17640 9e02e5094b5b766da8b22c97815689bc 495 PANTHER PTHR11819 4 478 1.4E-193 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS17640 9e02e5094b5b766da8b22c97815689bc 495 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 7 489 7.8E-220 T 23-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 LT40_RS17640 9e02e5094b5b766da8b22c97815689bc 495 PANTHER PTHR11819:SF148 4 478 1.4E-193 T 23-04-2016 LT40_RS17640 9e02e5094b5b766da8b22c97815689bc 495 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 23-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LT40_RS17640 9e02e5094b5b766da8b22c97815689bc 495 Pfam PF00474 Sodium:solute symporter family 35 437 7.7E-134 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS17640 9e02e5094b5b766da8b22c97815689bc 495 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 3.7E-116 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS17900 27db78803714bd5b746ff999b1b54eeb 334 Gene3D G3DSA:3.90.550.10 6 136 1.2E-15 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS17900 27db78803714bd5b746ff999b1b54eeb 334 Gene3D G3DSA:3.90.550.10 173 243 1.2E-15 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS17900 27db78803714bd5b746ff999b1b54eeb 334 Pfam PF00535 Glycosyl transferase family 2 11 117 3.4E-9 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS17900 27db78803714bd5b746ff999b1b54eeb 334 SUPERFAMILY SSF53448 176 269 4.42E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS17900 27db78803714bd5b746ff999b1b54eeb 334 SUPERFAMILY SSF53448 2 133 4.42E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS13560 bcd26e4c9b263614bee1bf0d27ecb6bb 232 PANTHER PTHR24220 3 232 5.7E-135 T 23-04-2016 LT40_RS13560 bcd26e4c9b263614bee1bf0d27ecb6bb 232 Gene3D G3DSA:3.40.50.300 1 221 1.0E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13560 bcd26e4c9b263614bee1bf0d27ecb6bb 232 Pfam PF00005 ABC transporter 17 161 2.6E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS13560 bcd26e4c9b263614bee1bf0d27ecb6bb 232 SUPERFAMILY SSF52540 2 221 8.1E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13560 bcd26e4c9b263614bee1bf0d27ecb6bb 232 PANTHER PTHR24220:SF404 3 232 5.7E-135 T 23-04-2016 LT40_RS13560 bcd26e4c9b263614bee1bf0d27ecb6bb 232 SMART SM00382 26 211 1.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS13560 bcd26e4c9b263614bee1bf0d27ecb6bb 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 6.7E-106 T 23-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 PANTHER PTHR24423:SF477 164 437 8.4E-56 T 23-04-2016 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 SUPERFAMILY SSF158472 171 224 2.48E-7 T 23-04-2016 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 PANTHER PTHR24423:SF477 50 72 8.4E-56 T 23-04-2016 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 SMART SM00304 170 225 3.2E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 SMART SM00387 331 440 1.5E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 Gene3D G3DSA:3.30.565.10 293 437 3.1E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 Gene3D G3DSA:1.10.287.130 218 286 8.3E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 PANTHER PTHR24423 164 437 8.4E-56 T 23-04-2016 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 289 5.9E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 SUPERFAMILY SSF55874 280 438 7.73E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 Pfam PF00672 HAMP domain 153 221 2.0E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 SMART SM00388 226 290 4.5E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 PANTHER PTHR24423 50 72 8.4E-56 T 23-04-2016 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 438 1.7E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 1.3E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 1.3E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.3E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05775 c060f6d4b739cce349b2a49a146bb10d 444 SUPERFAMILY SSF47384 209 290 8.63E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 1.3E-6 T 23-04-2016 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 527 542 1.3E-6 T 23-04-2016 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 Pfam PF00890 FAD binding domain 14 552 8.3E-108 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 Gene3D G3DSA:3.50.50.60 215 324 3.5E-65 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 Gene3D G3DSA:3.50.50.60 507 568 3.5E-65 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 Gene3D G3DSA:3.50.50.60 11 146 3.5E-65 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 SUPERFAMILY SSF56425 331 503 1.67E-29 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 SUPERFAMILY SSF51905 11 154 1.7E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 SUPERFAMILY SSF51905 225 321 1.7E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 SUPERFAMILY SSF51905 505 571 1.7E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 PANTHER PTHR11632:SF59 208 567 4.2E-194 T 23-04-2016 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 PANTHER PTHR11632:SF59 12 137 4.2E-194 T 23-04-2016 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 Gene3D G3DSA:3.90.700.10 349 501 1.9E-28 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 PANTHER PTHR11632 208 567 4.2E-194 T 23-04-2016 LT40_RS19200 28e08abd81bec6c7f2a1a26715e430de 573 PANTHER PTHR11632 12 137 4.2E-194 T 23-04-2016 LT40_RS15770 acbdb4b488388120b005fbf83f10e19b 235 Gene3D G3DSA:3.40.1050.10 5 222 7.5E-74 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS15770 acbdb4b488388120b005fbf83f10e19b 235 PANTHER PTHR11002 13 226 4.7E-87 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS15770 acbdb4b488388120b005fbf83f10e19b 235 SUPERFAMILY SSF53056 13 225 3.79E-68 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS15770 acbdb4b488388120b005fbf83f10e19b 235 PANTHER PTHR11002:SF13 13 226 4.7E-87 T 23-04-2016 LT40_RS15770 acbdb4b488388120b005fbf83f10e19b 235 SMART SM00947 44 211 1.6E-64 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS15770 acbdb4b488388120b005fbf83f10e19b 235 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 56 63 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS15770 acbdb4b488388120b005fbf83f10e19b 235 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 99 119 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS15770 acbdb4b488388120b005fbf83f10e19b 235 Pfam PF00484 Carbonic anhydrase 51 206 6.7E-51 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 Gene3D G3DSA:2.40.100.10 80 200 6.1E-46 T 23-04-2016 IPR029000 Cyclophilin-like domain LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 Gene3D G3DSA:2.40.100.10 404 518 7.3E-15 T 23-04-2016 IPR029000 Cyclophilin-like domain LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 SMART SM00797 247 532 3.9E-117 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 Gene3D G3DSA:3.30.1360.40 2 69 9.9E-10 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 SUPERFAMILY SSF50891 80 200 1.18E-37 T 23-04-2016 IPR029000 Cyclophilin-like domain LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 Pfam PF02626 Allophanate hydrolase subunit 2 249 514 4.3E-82 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 Pfam PF02682 Allophanate hydrolase subunit 1 2 190 1.8E-63 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 SMART SM00796 1 190 3.3E-95 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 SUPERFAMILY SSF160467 2 84 1.96E-13 T 23-04-2016 LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 PANTHER PTHR34698:SF2 1 199 2.8E-71 T 23-04-2016 LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 SUPERFAMILY SSF50891 404 517 4.93E-18 T 23-04-2016 IPR029000 Cyclophilin-like domain LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 226 519 4.1E-73 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B LT40_RS19140 31d9ebdff077e7aaf60b35600ab505c7 539 PANTHER PTHR34698 1 199 2.8E-71 T 23-04-2016 LT40_RS02325 ca377a542474062ffcd9fe5a7533ac05 261 PANTHER PTHR30435:SF19 1 261 1.2E-129 T 23-04-2016 LT40_RS02325 ca377a542474062ffcd9fe5a7533ac05 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 8.1E-115 T 23-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 LT40_RS02325 ca377a542474062ffcd9fe5a7533ac05 261 PANTHER PTHR30435 1 261 1.2E-129 T 23-04-2016 LT40_RS02325 ca377a542474062ffcd9fe5a7533ac05 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 3.8E-26 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LT40_RS02325 ca377a542474062ffcd9fe5a7533ac05 261 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-11 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LT40_RS02325 ca377a542474062ffcd9fe5a7533ac05 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site LT40_RS02325 ca377a542474062ffcd9fe5a7533ac05 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 2.9E-49 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LT40_RS02325 ca377a542474062ffcd9fe5a7533ac05 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 2.8E-30 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LT40_RS02325 ca377a542474062ffcd9fe5a7533ac05 261 SUPERFAMILY SSF117143 92 222 1.83E-36 T 23-04-2016 LT40_RS19045 e43aa6d39b59163488a361c43c57592d 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 14 280 1.2E-37 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS19045 e43aa6d39b59163488a361c43c57592d 308 PANTHER PTHR32196 15 305 1.2E-69 T 23-04-2016 LT40_RS19045 e43aa6d39b59163488a361c43c57592d 308 PANTHER PTHR32196:SF33 15 305 1.2E-69 T 23-04-2016 LT40_RS16475 37ec49f5bc66131902145a000bd742e3 126 SUPERFAMILY SSF55298 1 125 2.2E-47 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS16475 37ec49f5bc66131902145a000bd742e3 126 Pfam PF01042 Endoribonuclease L-PSP 10 124 7.1E-44 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS16475 37ec49f5bc66131902145a000bd742e3 126 PANTHER PTHR11803 1 122 1.2E-53 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS16475 37ec49f5bc66131902145a000bd742e3 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 23-04-2016 IPR019897 RidA, conserved site LT40_RS16475 37ec49f5bc66131902145a000bd742e3 126 Gene3D G3DSA:3.30.1330.40 2 122 3.0E-51 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS16475 37ec49f5bc66131902145a000bd742e3 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 4.8E-54 T 23-04-2016 IPR006056 RidA family LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 SUPERFAMILY SSF55785 29 139 1.03E-26 T 23-04-2016 IPR000014 PAS domain LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 Gene3D G3DSA:3.30.565.10 221 387 7.4E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 365 7.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 7.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 384 7.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 344 7.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 24 144 7.3E-16 T 23-04-2016 IPR000014 PAS domain LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 Gene3D G3DSA:1.10.287.130 147 220 1.1E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 386 3.7E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 Pfam PF00512 His Kinase A (phospho-acceptor) domain 154 222 1.5E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 SUPERFAMILY SSF52172 407 523 2.13E-27 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 PANTHER PTHR24423:SF438 28 524 2.3E-168 T 23-04-2016 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 PANTHER PTHR24423 28 524 2.3E-168 T 23-04-2016 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 SMART SM00086 97 139 1.4E-7 T 23-04-2016 IPR001610 PAC motif LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 Pfam PF13426 PAS domain 42 137 2.6E-21 T 23-04-2016 IPR000014 PAS domain LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 Gene3D G3DSA:3.30.450.20 35 139 8.1E-33 T 23-04-2016 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 SUPERFAMILY SSF55874 214 385 8.12E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 Gene3D G3DSA:3.40.50.2300 405 523 1.3E-33 T 23-04-2016 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 SUPERFAMILY SSF47384 147 221 4.12E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 SMART SM00388 154 224 2.6E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 SMART SM00448 406 518 2.1E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 SMART SM00387 264 387 4.7E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 SMART SM00091 22 95 3.1E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS08840 c4be60e653f64c15b16797d53526db3a 529 Pfam PF00072 Response regulator receiver domain 408 518 5.6E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS06040 0051312e529a644b7582dbdf9a9a880c 380 PANTHER PTHR10996 1 330 5.3E-133 T 23-04-2016 LT40_RS06040 0051312e529a644b7582dbdf9a9a880c 380 Gene3D G3DSA:3.40.50.720 1 107 3.9E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06040 0051312e529a644b7582dbdf9a9a880c 380 Pfam PF11890 Domain of unknown function (DUF3410) 288 376 2.2E-21 T 23-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 LT40_RS06040 0051312e529a644b7582dbdf9a9a880c 380 PANTHER PTHR10996:SF111 1 330 5.3E-133 T 23-04-2016 LT40_RS06040 0051312e529a644b7582dbdf9a9a880c 380 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 362 43.9 T 23-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 LT40_RS06040 0051312e529a644b7582dbdf9a9a880c 380 SUPERFAMILY SSF51735 91 257 5.33E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06040 0051312e529a644b7582dbdf9a9a880c 380 SUPERFAMILY SSF52283 3 103 2.06E-18 T 23-04-2016 LT40_RS06040 0051312e529a644b7582dbdf9a9a880c 380 Gene3D G3DSA:3.40.50.720 111 258 1.8E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06040 0051312e529a644b7582dbdf9a9a880c 380 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 196 212 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LT40_RS06040 0051312e529a644b7582dbdf9a9a880c 380 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 255 2.2E-31 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LT40_RS06040 0051312e529a644b7582dbdf9a9a880c 380 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 279 2.6E-16 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LT40_RS16945 8abdfa12c16b43853de6ed67800ee15d 333 SUPERFAMILY SSF53850 25 329 2.01E-77 T 23-04-2016 LT40_RS16945 8abdfa12c16b43853de6ed67800ee15d 333 PANTHER PTHR30006 1 328 2.9E-150 T 23-04-2016 LT40_RS16945 8abdfa12c16b43853de6ed67800ee15d 333 PANTHER PTHR30006:SF4 1 328 2.9E-150 T 23-04-2016 LT40_RS16945 8abdfa12c16b43853de6ed67800ee15d 333 Gene3D G3DSA:3.40.190.10 8 121 2.2E-30 T 23-04-2016 LT40_RS16945 8abdfa12c16b43853de6ed67800ee15d 333 Gene3D G3DSA:3.40.190.10 265 302 2.2E-30 T 23-04-2016 LT40_RS16945 8abdfa12c16b43853de6ed67800ee15d 333 Gene3D G3DSA:3.40.190.10 125 264 6.4E-50 T 23-04-2016 LT40_RS16945 8abdfa12c16b43853de6ed67800ee15d 333 PIRSF PIRSF002825 2 333 6.9E-99 T 23-04-2016 IPR026045 Ferric binding protein LT40_RS16945 8abdfa12c16b43853de6ed67800ee15d 333 Pfam PF13343 Bacterial extracellular solute-binding protein 72 298 7.6E-20 T 23-04-2016 LT40_RS03570 a6978519590df1c70442b6f847ed408f 381 PANTHER PTHR11751:SF301 4 381 2.2E-140 T 23-04-2016 LT40_RS03570 a6978519590df1c70442b6f847ed408f 381 Pfam PF00155 Aminotransferase class I and II 26 378 1.8E-61 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS03570 a6978519590df1c70442b6f847ed408f 381 Gene3D G3DSA:3.90.1150.10 267 378 1.9E-17 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS03570 a6978519590df1c70442b6f847ed408f 381 PANTHER PTHR11751 4 381 2.2E-140 T 23-04-2016 LT40_RS03570 a6978519590df1c70442b6f847ed408f 381 Gene3D G3DSA:3.40.640.10 38 266 1.0E-77 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS03570 a6978519590df1c70442b6f847ed408f 381 SUPERFAMILY SSF53383 3 380 8.7E-100 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS08225 b8f858856a4814e082ab8d208e811adf 172 SUPERFAMILY SSF88946 12 92 9.02E-13 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS08225 b8f858856a4814e082ab8d208e811adf 172 SUPERFAMILY SSF88659 89 168 4.49E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS08225 b8f858856a4814e082ab8d208e811adf 172 Pfam PF08281 Sigma-70, region 4 110 162 3.7E-14 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS08225 b8f858856a4814e082ab8d208e811adf 172 PANTHER PTHR30173 10 170 6.4E-44 T 23-04-2016 LT40_RS08225 b8f858856a4814e082ab8d208e811adf 172 PANTHER PTHR30173:SF30 10 170 6.4E-44 T 23-04-2016 LT40_RS08225 b8f858856a4814e082ab8d208e811adf 172 Gene3D G3DSA:1.10.10.10 105 167 9.9E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08225 b8f858856a4814e082ab8d208e811adf 172 Pfam PF04542 Sigma-70 region 2 14 79 2.5E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS08225 b8f858856a4814e082ab8d208e811adf 172 Gene3D G3DSA:1.10.1740.10 13 79 4.5E-12 T 23-04-2016 LT40_RS08225 b8f858856a4814e082ab8d208e811adf 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 164 7.2E-23 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS03775 f6d8ad77535ec71b23fca7ba4891e0f3 285 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 285 39.059 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 LT40_RS03775 f6d8ad77535ec71b23fca7ba4891e0f3 285 Gene3D G3DSA:3.40.50.300 1 154 1.6E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03775 f6d8ad77535ec71b23fca7ba4891e0f3 285 Pfam PF03668 P-loop ATPase protein family 1 284 3.2E-93 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 LT40_RS03775 f6d8ad77535ec71b23fca7ba4891e0f3 285 PIRSF PIRSF005052 1 285 1.2E-112 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 LT40_RS03775 f6d8ad77535ec71b23fca7ba4891e0f3 285 PANTHER PTHR30448:SF0 1 284 9.0E-133 T 23-04-2016 LT40_RS03775 f6d8ad77535ec71b23fca7ba4891e0f3 285 SUPERFAMILY SSF52540 1 158 1.13E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03775 f6d8ad77535ec71b23fca7ba4891e0f3 285 PANTHER PTHR30448 1 284 9.0E-133 T 23-04-2016 LT40_RS03370 b50fe47e1ecb9371b4e3a6be5d09d05a 205 Pfam PF01810 LysE type translocator 14 200 4.3E-33 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS03370 b50fe47e1ecb9371b4e3a6be5d09d05a 205 PANTHER PTHR30086 1 195 2.4E-57 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS03370 b50fe47e1ecb9371b4e3a6be5d09d05a 205 PANTHER PTHR30086:SF2 1 195 2.4E-57 T 23-04-2016 LT40_RS03370 b50fe47e1ecb9371b4e3a6be5d09d05a 205 PIRSF PIRSF006324 1 202 5.8E-46 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 SMART SM00387 348 459 7.3E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 PANTHER PTHR24423:SF354 70 128 3.2E-82 T 23-04-2016 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 PANTHER PTHR24423:SF354 3 10 3.2E-82 T 23-04-2016 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 PANTHER PTHR24423:SF354 179 457 3.2E-82 T 23-04-2016 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 PANTHER PTHR24423 70 128 3.2E-82 T 23-04-2016 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 PANTHER PTHR24423 3 10 3.2E-82 T 23-04-2016 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 PANTHER PTHR24423 179 457 3.2E-82 T 23-04-2016 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 SUPERFAMILY SSF55874 294 457 4.32E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 Gene3D G3DSA:3.30.565.10 293 457 3.1E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 SMART SM00388 239 305 1.8E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 6.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 6.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 6.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 6.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 6 456 4.8E-122 T 23-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 457 3.8E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 SUPERFAMILY SSF47384 223 306 1.31E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 Gene3D G3DSA:1.10.287.130 229 292 8.5E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09705 9b4aa89d02496ec5cd471f4d95090367 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 305 3.0E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 Gene3D G3DSA:3.30.70.260 324 408 1.7E-25 T 23-04-2016 LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 119 294 7.7E-49 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 Gene3D G3DSA:3.40.50.720 120 297 5.8E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 PANTHER PTHR10996 1 369 6.5E-238 T 23-04-2016 LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 PANTHER PTHR10996:SF18 1 369 6.5E-238 T 23-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 SUPERFAMILY SSF51735 108 295 4.19E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 2.0E-38 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 SUPERFAMILY SSF52283 7 136 1.23E-49 T 23-04-2016 LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 Gene3D G3DSA:3.40.50.720 8 119 1.8E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17075 2a35e71e37ac69f4aa2a77fa46c64154 409 SUPERFAMILY SSF55021 332 408 2.25E-16 T 23-04-2016 LT40_RS00750 cd62292a65cf4a56437d275b78eec5be 263 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LT40_RS00750 cd62292a65cf4a56437d275b78eec5be 263 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LT40_RS00750 cd62292a65cf4a56437d275b78eec5be 263 SUPERFAMILY SSF51556 2 256 1.8E-83 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS00750 cd62292a65cf4a56437d275b78eec5be 263 Pfam PF01026 TatD related DNase 3 254 1.1E-74 T 23-04-2016 IPR001130 TatD family GO:0016788 LT40_RS00750 cd62292a65cf4a56437d275b78eec5be 263 PIRSF PIRSF005902 1 258 7.9E-73 T 23-04-2016 IPR001130 TatD family GO:0016788 LT40_RS00750 cd62292a65cf4a56437d275b78eec5be 263 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 2.9E-81 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 LT40_RS00750 cd62292a65cf4a56437d275b78eec5be 263 PANTHER PTHR10060:SF20 1 258 4.2E-122 T 23-04-2016 LT40_RS00750 cd62292a65cf4a56437d275b78eec5be 263 Gene3D G3DSA:3.20.20.140 1 256 8.3E-81 T 23-04-2016 LT40_RS00750 cd62292a65cf4a56437d275b78eec5be 263 PANTHER PTHR10060 1 258 4.2E-122 T 23-04-2016 IPR001130 TatD family GO:0016788 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 911 0.0 T 23-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 ProSitePatterns PS00450 Aconitase family signature 1. 446 462 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 Gene3D G3DSA:3.30.499.10 369 393 7.3E-64 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 Gene3D G3DSA:3.30.499.10 438 594 7.3E-64 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 Gene3D G3DSA:3.20.19.10 655 910 2.2E-81 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PANTHER PTHR11670:SF1 769 914 0.0 T 23-04-2016 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PANTHER PTHR11670:SF1 8 393 0.0 T 23-04-2016 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PANTHER PTHR11670:SF1 435 669 0.0 T 23-04-2016 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PANTHER PTHR11670:SF1 685 730 0.0 T 23-04-2016 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 Pfam PF00330 Aconitase family (aconitate hydratase) 75 581 6.3E-185 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PANTHER PTHR11670 769 914 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PANTHER PTHR11670 8 393 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PANTHER PTHR11670 435 669 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PANTHER PTHR11670 685 730 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 SUPERFAMILY SSF52016 649 910 4.71E-86 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 Gene3D G3DSA:3.30.499.10 28 249 1.6E-78 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PRINTS PR00415 Aconitase family signature 279 292 3.7E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PRINTS PR00415 Aconitase family signature 146 159 3.7E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PRINTS PR00415 Aconitase family signature 293 306 3.7E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PRINTS PR00415 Aconitase family signature 217 232 3.7E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PRINTS PR00415 Aconitase family signature 512 525 3.7E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PRINTS PR00415 Aconitase family signature 372 386 3.7E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PRINTS PR00415 Aconitase family signature 203 216 3.7E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PRINTS PR00415 Aconitase family signature 170 178 3.7E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 PRINTS PR00415 Aconitase family signature 450 461 3.7E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 SUPERFAMILY SSF53732 4 645 7.72E-226 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 ProSitePatterns PS01244 Aconitase family signature 2. 512 525 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 Pfam PF00694 Aconitase C-terminal domain 710 837 1.8E-48 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06840 f1ec1154e12c47738a6f882517ed1fad 916 Gene3D G3DSA:3.40.1060.10 250 366 1.5E-35 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS10670 8a4e0d793c12666df6552fbef48030d5 802 Pfam PF00924 Mechanosensitive ion channel 579 775 7.7E-41 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LT40_RS10670 8a4e0d793c12666df6552fbef48030d5 802 SUPERFAMILY SSF82689 694 786 1.83E-12 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LT40_RS10670 8a4e0d793c12666df6552fbef48030d5 802 PANTHER PTHR30347 101 802 2.2E-194 T 23-04-2016 LT40_RS10670 8a4e0d793c12666df6552fbef48030d5 802 SUPERFAMILY SSF82861 536 619 1.44E-11 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LT40_RS10670 8a4e0d793c12666df6552fbef48030d5 802 Gene3D G3DSA:3.30.70.100 697 774 3.2E-8 T 23-04-2016 LT40_RS10670 8a4e0d793c12666df6552fbef48030d5 802 Pfam PF12607 Protein of unknown function (DUF3772) 138 196 3.1E-16 T 23-04-2016 IPR022249 Domain of unknown function DUF3772 LT40_RS10670 8a4e0d793c12666df6552fbef48030d5 802 SUPERFAMILY SSF50182 621 686 2.39E-15 T 23-04-2016 IPR010920 LSM domain LT40_RS10670 8a4e0d793c12666df6552fbef48030d5 802 PANTHER PTHR30347:SF3 101 802 2.2E-194 T 23-04-2016 LT40_RS10670 8a4e0d793c12666df6552fbef48030d5 802 Gene3D G3DSA:2.30.30.60 636 685 3.9E-16 T 23-04-2016 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 PANTHER PTHR11615 274 783 1.3E-200 T 23-04-2016 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 PANTHER PTHR11615 55 255 1.3E-200 T 23-04-2016 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 Pfam PF01568 Molydopterin dinucleotide binding domain 652 707 2.0E-5 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 17 764 1.7E-281 T 23-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 Pfam PF00384 Molybdopterin oxidoreductase 113 415 2.6E-26 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 PIRSF PIRSF000144 2 770 0.0 T 23-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 PANTHER PTHR11615:SF114 274 783 1.3E-200 T 23-04-2016 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 PANTHER PTHR11615:SF114 55 255 1.3E-200 T 23-04-2016 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 Gene3D G3DSA:3.40.228.10 186 397 8.2E-56 T 23-04-2016 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 SUPERFAMILY SSF53706 51 633 1.7E-130 T 23-04-2016 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 Gene3D G3DSA:3.40.50.740 113 185 1.1E-49 T 23-04-2016 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 Gene3D G3DSA:3.40.50.740 398 631 1.1E-49 T 23-04-2016 LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 SUPERFAMILY SSF50692 647 770 7.01E-14 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain LT40_RS09940 9090b9ff894aae914926ffa27429090f 784 Gene3D G3DSA:2.40.40.20 646 770 2.0E-6 T 23-04-2016 LT40_RS14050 27a2e34ce8bd28cee7fc3c3fab48d6db 226 Pfam PF13500 AAA domain 4 213 4.8E-38 T 23-04-2016 LT40_RS14050 27a2e34ce8bd28cee7fc3c3fab48d6db 226 PANTHER PTHR21343 1 223 3.9E-107 T 23-04-2016 LT40_RS14050 27a2e34ce8bd28cee7fc3c3fab48d6db 226 PANTHER PTHR21343:SF13 1 223 3.9E-107 T 23-04-2016 LT40_RS14050 27a2e34ce8bd28cee7fc3c3fab48d6db 226 SUPERFAMILY SSF52540 2 220 5.1E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14050 27a2e34ce8bd28cee7fc3c3fab48d6db 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 177 3.0E-43 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LT40_RS14050 27a2e34ce8bd28cee7fc3c3fab48d6db 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 28.816 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LT40_RS14050 27a2e34ce8bd28cee7fc3c3fab48d6db 226 Gene3D G3DSA:3.40.50.300 2 221 2.6E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14050 27a2e34ce8bd28cee7fc3c3fab48d6db 226 PIRSF PIRSF006755 1 225 9.4E-74 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 LT40_RS20750 3fd0f7ee1c00be23ebe431b05931192e 287 PIRSF PIRSF035875 1 287 9.5E-86 T 23-04-2016 IPR017039 Virulence factor BrkB LT40_RS20750 3fd0f7ee1c00be23ebe431b05931192e 287 Pfam PF03631 Virulence factor BrkB 24 277 1.7E-69 T 23-04-2016 IPR017039 Virulence factor BrkB LT40_RS20750 3fd0f7ee1c00be23ebe431b05931192e 287 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 17 275 1.9E-44 T 23-04-2016 IPR017039 Virulence factor BrkB LT40_RS20750 3fd0f7ee1c00be23ebe431b05931192e 287 PANTHER PTHR30213:SF1 6 278 9.9E-70 T 23-04-2016 LT40_RS20750 3fd0f7ee1c00be23ebe431b05931192e 287 PANTHER PTHR30213 6 278 9.9E-70 T 23-04-2016 LT40_RS00895 087c3f9faf708bb2ad09c0052be74a67 364 SUPERFAMILY SSF117916 5 85 1.63E-13 T 23-04-2016 LT40_RS00895 087c3f9faf708bb2ad09c0052be74a67 364 PANTHER PTHR23264 1 355 2.2E-157 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein LT40_RS00895 087c3f9faf708bb2ad09c0052be74a67 364 Hamap MF_02040 Iron-sulfur cluster carrier protein. 93 343 37.002 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein LT40_RS00895 087c3f9faf708bb2ad09c0052be74a67 364 PANTHER PTHR23264:SF19 1 355 2.2E-157 T 23-04-2016 LT40_RS00895 087c3f9faf708bb2ad09c0052be74a67 364 ProSitePatterns PS01215 Mrp family signature. 206 222 - T 23-04-2016 IPR000808 Mrp, conserved site GO:0005524 LT40_RS00895 087c3f9faf708bb2ad09c0052be74a67 364 Gene3D G3DSA:3.40.50.300 90 341 3.8E-105 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00895 087c3f9faf708bb2ad09c0052be74a67 364 Pfam PF01883 Domain of unknown function DUF59 6 79 8.2E-16 T 23-04-2016 IPR002744 Domain of unknown function DUF59 LT40_RS00895 087c3f9faf708bb2ad09c0052be74a67 364 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 97 342 3.2E-100 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein LT40_RS00895 087c3f9faf708bb2ad09c0052be74a67 364 SUPERFAMILY SSF52540 100 348 1.54E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03050 75b128843bc3a362de5b615a7e677604 80 PANTHER PTHR33359 1 80 1.8E-17 T 23-04-2016 LT40_RS03050 75b128843bc3a362de5b615a7e677604 80 SUPERFAMILY SSF54285 4 80 3.92E-18 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LT40_RS03050 75b128843bc3a362de5b615a7e677604 80 Pfam PF02597 ThiS family 5 80 1.3E-16 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 LT40_RS03050 75b128843bc3a362de5b615a7e677604 80 Gene3D G3DSA:3.10.20.30 1 80 9.4E-19 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 SUPERFAMILY SSF52540 346 623 1.94E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 41 236 4.9E-23 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 Hamap MF_01973 Lon protease [lon]. 41 805 57.876 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 711 719 - T 23-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 388 526 1.1E-22 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 Gene3D G3DSA:3.40.50.300 346 525 6.6E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 SMART SM00382 384 529 9.7E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 Gene3D G3DSA:3.30.230.10 630 806 8.8E-64 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 608 805 6.8E-75 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 SUPERFAMILY SSF54211 630 805 1.71E-45 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 PANTHER PTHR10046 14 806 0.0 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 629 645 6.2E-47 T 23-04-2016 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 738 757 6.2E-47 T 23-04-2016 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 761 779 6.2E-47 T 23-04-2016 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 708 727 6.2E-47 T 23-04-2016 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 392 411 6.2E-47 T 23-04-2016 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 SMART SM00464 40 237 8.3E-20 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 TIGRFAM TIGR00763 lon: endopeptidase La 43 806 8.6E-273 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 SUPERFAMILY SSF88697 43 236 1.84E-17 T 23-04-2016 IPR015947 PUA-like domain LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 PIRSF PIRSF001174 21 806 4.0E-270 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 LT40_RS00085 ea71d3ad06fa1e0dd1e9b172e8b54c70 806 Gene3D G3DSA:1.10.8.60 528 620 4.0E-28 T 23-04-2016 LT40_RS06585 4dffd8d6ab1ca2ff55efe9d99aa13901 146 PANTHER PTHR11911 16 146 3.4E-39 T 23-04-2016 LT40_RS06585 4dffd8d6ab1ca2ff55efe9d99aa13901 146 Gene3D G3DSA:3.10.580.10 15 128 4.9E-33 T 23-04-2016 LT40_RS06585 4dffd8d6ab1ca2ff55efe9d99aa13901 146 SMART SM00116 82 129 5.0E-7 T 23-04-2016 IPR000644 CBS domain LT40_RS06585 4dffd8d6ab1ca2ff55efe9d99aa13901 146 SMART SM00116 17 64 6.3E-5 T 23-04-2016 IPR000644 CBS domain LT40_RS06585 4dffd8d6ab1ca2ff55efe9d99aa13901 146 Pfam PF00571 CBS domain 16 63 6.0E-10 T 23-04-2016 IPR000644 CBS domain LT40_RS06585 4dffd8d6ab1ca2ff55efe9d99aa13901 146 Pfam PF00571 CBS domain 75 126 4.5E-12 T 23-04-2016 IPR000644 CBS domain LT40_RS06585 4dffd8d6ab1ca2ff55efe9d99aa13901 146 SUPERFAMILY SSF54631 15 144 8.84E-33 T 23-04-2016 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 Pfam PF03144 Elongation factor Tu domain 2 311 376 6.0E-11 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 1.1E-16 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 SUPERFAMILY SSF50447 259 390 7.78E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 PANTHER PTHR23115:SF69 248 465 1.2E-238 T 23-04-2016 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 PANTHER PTHR23115:SF69 1 182 1.2E-238 T 23-04-2016 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 Pfam PF00009 Elongation factor Tu GTP binding domain 11 274 2.9E-46 T 23-04-2016 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 524 51.223 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 526 1.1E-258 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 SUPERFAMILY SSF54980 390 465 1.62E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 PRINTS PR00315 GTP-binding elongation factor signature 13 26 7.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 PRINTS PR00315 GTP-binding elongation factor signature 99 110 7.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 PRINTS PR00315 GTP-binding elongation factor signature 135 144 7.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 PRINTS PR00315 GTP-binding elongation factor signature 83 93 7.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 PRINTS PR00315 GTP-binding elongation factor signature 63 71 7.6E-12 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 SUPERFAMILY SSF52540 8 274 6.0E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 Gene3D G3DSA:3.40.50.300 7 278 7.9E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 Gene3D G3DSA:2.40.30.10 289 391 2.5E-25 T 23-04-2016 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 PANTHER PTHR23115 248 465 1.2E-238 T 23-04-2016 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 PANTHER PTHR23115 1 182 1.2E-238 T 23-04-2016 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 Gene3D G3DSA:3.30.70.870 392 461 6.5E-16 T 23-04-2016 LT40_RS03005 fb35fa2c2d265baebe7ca83ef17d709f 527 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 511 2.7E-46 T 23-04-2016 IPR032090 Peptide chain release factor 3, C-terminal LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 3.9E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 422 3.9E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 476 3.9E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 436 3.9E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 276 329 5.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 Gene3D G3DSA:1.10.287.130 265 323 2.3E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 478 6.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 Pfam PF00672 HAMP domain 202 270 1.1E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 SUPERFAMILY SSF158472 223 271 1.7E-5 T 23-04-2016 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 Gene3D G3DSA:3.30.565.10 336 478 2.8E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 SUPERFAMILY SSF55874 334 477 5.37E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 PANTHER PTHR24423 1 7 2.4E-42 T 23-04-2016 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 PANTHER PTHR24423 215 477 2.4E-42 T 23-04-2016 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 SMART SM00388 275 340 3.6E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 SMART SM00387 374 479 2.8E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 SUPERFAMILY SSF47384 259 317 8.24E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS03225 133644fae815f80be420673b8ca10dd4 480 SMART SM00304 221 274 2.3E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS09815 c3abd6c664f4e7b88fdd28e2567a1c15 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 32 324 9.7E-50 T 23-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain LT40_RS09815 c3abd6c664f4e7b88fdd28e2567a1c15 333 PIRSF PIRSF002816 1 331 4.1E-152 T 23-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 LT40_RS09815 c3abd6c664f4e7b88fdd28e2567a1c15 333 PANTHER PTHR30036 12 331 6.9E-70 T 23-04-2016 LT40_RS09815 c3abd6c664f4e7b88fdd28e2567a1c15 333 PANTHER PTHR30036:SF1 12 331 6.9E-70 T 23-04-2016 LT40_RS09815 c3abd6c664f4e7b88fdd28e2567a1c15 333 Gene3D G3DSA:3.40.50.2300 154 302 3.8E-40 T 23-04-2016 LT40_RS09815 c3abd6c664f4e7b88fdd28e2567a1c15 333 Gene3D G3DSA:3.40.50.2300 30 153 2.7E-38 T 23-04-2016 LT40_RS09815 c3abd6c664f4e7b88fdd28e2567a1c15 333 SUPERFAMILY SSF53822 30 332 6.09E-60 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS10535 8912392b32b86a3450dac2e241a20a93 308 SUPERFAMILY SSF82282 4 296 5.76E-79 T 23-04-2016 IPR003726 Homocysteine-binding domain LT40_RS10535 8912392b32b86a3450dac2e241a20a93 308 PANTHER PTHR11103 2 293 1.1E-47 T 23-04-2016 LT40_RS10535 8912392b32b86a3450dac2e241a20a93 308 PANTHER PTHR11103:SF7 2 293 1.1E-47 T 23-04-2016 LT40_RS10535 8912392b32b86a3450dac2e241a20a93 308 Gene3D G3DSA:3.20.20.330 2 295 4.0E-76 T 23-04-2016 IPR003726 Homocysteine-binding domain LT40_RS10535 8912392b32b86a3450dac2e241a20a93 308 Pfam PF02574 Homocysteine S-methyltransferase 7 292 1.2E-57 T 23-04-2016 IPR003726 Homocysteine-binding domain LT40_RS10535 8912392b32b86a3450dac2e241a20a93 308 PIRSF PIRSF037505 2 306 2.6E-15 T 23-04-2016 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 UniPathway: UPA00051 LT40_RS12515 0fd44ad3fcfd7b713ca395e424c21055 224 PANTHER PTHR11908:SF66 67 214 1.6E-32 T 23-04-2016 LT40_RS12515 0fd44ad3fcfd7b713ca395e424c21055 224 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 106 114 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LT40_RS12515 0fd44ad3fcfd7b713ca395e424c21055 224 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 73 126 1.3E-7 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS12515 0fd44ad3fcfd7b713ca395e424c21055 224 Pfam PF01799 [2Fe-2S] binding domain 140 213 1.1E-28 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS12515 0fd44ad3fcfd7b713ca395e424c21055 224 Gene3D G3DSA:3.10.20.30 68 141 6.7E-31 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS12515 0fd44ad3fcfd7b713ca395e424c21055 224 SUPERFAMILY SSF54292 67 154 1.7E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS12515 0fd44ad3fcfd7b713ca395e424c21055 224 SUPERFAMILY SSF47741 151 221 1.44E-27 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS12515 0fd44ad3fcfd7b713ca395e424c21055 224 Gene3D G3DSA:1.10.150.120 142 219 1.3E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS12515 0fd44ad3fcfd7b713ca395e424c21055 224 PANTHER PTHR11908 67 214 1.6E-32 T 23-04-2016 LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 243 287 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 275 291 1.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 275 1.5E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 Gene3D G3DSA:1.10.10.60 245 291 6.7E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 SUPERFAMILY SSF46689 244 292 9.68E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 SMART SM00342 208 291 2.0E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 Pfam PF06719 AraC-type transcriptional regulator N-terminus 31 179 5.4E-37 T 23-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 PANTHER PTHR11019:SF134 7 290 2.5E-69 T 23-04-2016 LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 Pfam PF12833 Helix-turn-helix domain 214 291 3.3E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 PANTHER PTHR11019 7 290 2.5E-69 T 23-04-2016 LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 SUPERFAMILY SSF46689 192 242 9.98E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS09845 ab5307adac0d6b1f03991ddec95d4134 294 Gene3D G3DSA:1.10.10.60 192 244 4.5E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10490 7a2c0b18eb258a2bbee36ee0c79c6dd4 322 Gene3D G3DSA:3.40.50.720 166 250 2.3E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10490 7a2c0b18eb258a2bbee36ee0c79c6dd4 322 Pfam PF02625 XdhC and CoxI family 15 67 1.6E-17 T 23-04-2016 IPR003777 XdhC- CoxI LT40_RS10490 7a2c0b18eb258a2bbee36ee0c79c6dd4 322 SUPERFAMILY SSF51735 161 212 2.36E-5 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10490 7a2c0b18eb258a2bbee36ee0c79c6dd4 322 PANTHER PTHR30388:SF4 5 316 5.7E-80 T 23-04-2016 LT40_RS10490 7a2c0b18eb258a2bbee36ee0c79c6dd4 322 PANTHER PTHR30388 5 316 5.7E-80 T 23-04-2016 LT40_RS10490 7a2c0b18eb258a2bbee36ee0c79c6dd4 322 Pfam PF13478 XdhC Rossmann domain 168 310 6.2E-33 T 23-04-2016 IPR027051 XdhC Rossmann domain LT40_RS09825 0642b144d37b79b08ec752a8e3fdb6d1 321 PANTHER PTHR32196:SF37 14 321 9.4E-136 T 23-04-2016 LT40_RS09825 0642b144d37b79b08ec752a8e3fdb6d1 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 313 5.2E-40 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS09825 0642b144d37b79b08ec752a8e3fdb6d1 321 PANTHER PTHR32196 14 321 9.4E-136 T 23-04-2016 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 203 654 8.8E-205 T 23-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 SUPERFAMILY SSF52777 413 654 7.56E-82 T 23-04-2016 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 PANTHER PTHR23151:SF68 21 116 2.2E-239 T 23-04-2016 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 PANTHER PTHR23151:SF68 408 654 2.2E-239 T 23-04-2016 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 139 168 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 SUPERFAMILY SSF51230 5 91 3.01E-21 T 23-04-2016 IPR011053 Single hybrid motif LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 250 279 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 PANTHER PTHR23151:SF68 225 392 2.2E-239 T 23-04-2016 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 425 654 2.6E-78 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 Gene3D G3DSA:3.30.559.10 417 654 1.3E-83 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 SUPERFAMILY SSF51230 226 319 4.06E-22 T 23-04-2016 IPR011053 Single hybrid motif LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 PANTHER PTHR23151 21 116 2.2E-239 T 23-04-2016 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 Pfam PF02817 e3 binding domain 351 386 5.0E-15 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 SUPERFAMILY SSF51230 115 208 2.75E-22 T 23-04-2016 IPR011053 Single hybrid motif LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 Gene3D G3DSA:4.10.320.10 348 396 2.0E-19 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 PANTHER PTHR23151 408 654 2.2E-239 T 23-04-2016 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 PANTHER PTHR23151 225 392 2.2E-239 T 23-04-2016 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 Gene3D G3DSA:2.40.50.100 228 303 5.0E-22 T 23-04-2016 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 Gene3D G3DSA:2.40.50.100 5 78 2.4E-23 T 23-04-2016 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 Gene3D G3DSA:2.40.50.100 117 192 4.7E-22 T 23-04-2016 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 SUPERFAMILY SSF47005 346 390 6.28E-12 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 Pfam PF00364 Biotin-requiring enzyme 117 188 3.3E-22 T 23-04-2016 IPR000089 Biotin/lipoyl attachment LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 Pfam PF00364 Biotin-requiring enzyme 5 74 1.0E-21 T 23-04-2016 IPR000089 Biotin/lipoyl attachment LT40_RS17655 59ddb612c312288e8b89d9944e44e543 654 Pfam PF00364 Biotin-requiring enzyme 228 299 3.9E-22 T 23-04-2016 IPR000089 Biotin/lipoyl attachment LT40_RS12785 415a8b3559815cdf21c82e546e820b4a 235 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 5 227 3.6E-65 T 23-04-2016 IPR005224 Sugar fermentation stimulation protein LT40_RS12785 415a8b3559815cdf21c82e546e820b4a 235 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 235 55.247 T 23-04-2016 IPR005224 Sugar fermentation stimulation protein LT40_RS12785 415a8b3559815cdf21c82e546e820b4a 235 PANTHER PTHR30545:SF2 1 235 4.8E-82 T 23-04-2016 LT40_RS12785 415a8b3559815cdf21c82e546e820b4a 235 Pfam PF03749 Sugar fermentation stimulation protein 13 225 3.7E-69 T 23-04-2016 IPR005224 Sugar fermentation stimulation protein LT40_RS12785 415a8b3559815cdf21c82e546e820b4a 235 PANTHER PTHR30545 1 235 4.8E-82 T 23-04-2016 LT40_RS19730 17490637258b1a64bb39d3817d0aae0b 313 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 4 307 3.5E-103 T 23-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 LT40_RS19730 17490637258b1a64bb39d3817d0aae0b 313 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 307 2.2E-102 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LT40_RS19730 17490637258b1a64bb39d3817d0aae0b 313 PANTHER PTHR10584:SF170 3 302 4.3E-106 T 23-04-2016 LT40_RS19730 17490637258b1a64bb39d3817d0aae0b 313 Pfam PF00294 pfkB family carbohydrate kinase 10 291 3.9E-48 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB LT40_RS19730 17490637258b1a64bb39d3817d0aae0b 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LT40_RS19730 17490637258b1a64bb39d3817d0aae0b 313 PIRSF PIRSF000535 1 310 2.1E-88 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LT40_RS19730 17490637258b1a64bb39d3817d0aae0b 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LT40_RS19730 17490637258b1a64bb39d3817d0aae0b 313 SUPERFAMILY SSF53613 4 291 2.34E-67 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS19730 17490637258b1a64bb39d3817d0aae0b 313 Gene3D G3DSA:3.40.1190.20 34 309 1.7E-78 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS19730 17490637258b1a64bb39d3817d0aae0b 313 PANTHER PTHR10584 3 302 4.3E-106 T 23-04-2016 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 417 432 3.1E-18 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 375 392 3.1E-18 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 292 310 3.1E-18 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 319 335 3.1E-18 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 256 269 3.1E-18 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 Gene3D G3DSA:3.40.50.720 138 306 8.5E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 Gene3D G3DSA:3.30.360.10 307 462 7.3E-57 T 23-04-2016 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 PANTHER PTHR10836:SF35 125 485 2.1E-233 T 23-04-2016 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 SMART SM00846 137 298 2.1E-48 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 SUPERFAMILY SSF51735 138 314 6.25E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 138 298 2.8E-36 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 296 303 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 PANTHER PTHR10836 125 485 2.1E-233 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 303 460 1.7E-47 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS07385 b043f594353ff7fe47fcaebf61d55bac 487 SUPERFAMILY SSF55347 298 461 1.43E-54 T 23-04-2016 LT40_RS11620 8889c65840c8f3c4f8c93471e2d6733f 187 Pfam PF14803 Nudix N-terminal 5 38 3.0E-13 T 23-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- LT40_RS11620 8889c65840c8f3c4f8c93471e2d6733f 187 Gene3D G3DSA:3.90.79.10 40 171 9.5E-34 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS11620 8889c65840c8f3c4f8c93471e2d6733f 187 SUPERFAMILY SSF55811 5 166 3.25E-39 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS11620 8889c65840c8f3c4f8c93471e2d6733f 187 Pfam PF00293 NUDIX domain 46 152 2.3E-16 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LT40_RS11620 8889c65840c8f3c4f8c93471e2d6733f 187 PRINTS PR00502 NUDIX hydrolase family signature 83 98 1.8E-7 T 23-04-2016 IPR020476 NUDIX hydrolase LT40_RS11620 8889c65840c8f3c4f8c93471e2d6733f 187 PRINTS PR00502 NUDIX hydrolase family signature 69 83 1.8E-7 T 23-04-2016 IPR020476 NUDIX hydrolase LT40_RS11620 8889c65840c8f3c4f8c93471e2d6733f 187 ProSitePatterns PS00893 Nudix box signature. 74 95 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LT40_RS11620 8889c65840c8f3c4f8c93471e2d6733f 187 Gene3D G3DSA:2.20.70.10 4 38 9.9E-13 T 23-04-2016 LT40_RS11620 8889c65840c8f3c4f8c93471e2d6733f 187 PANTHER PTHR22769 1 169 8.9E-46 T 23-04-2016 LT40_RS11620 8889c65840c8f3c4f8c93471e2d6733f 187 PANTHER PTHR22769:SF17 1 169 8.9E-46 T 23-04-2016 LT40_RS13090 bca0766c9d0d052d57e5ddf5153e9f8c 328 PANTHER PTHR24220 8 18 3.1E-154 T 23-04-2016 LT40_RS13090 bca0766c9d0d052d57e5ddf5153e9f8c 328 PANTHER PTHR24220 34 325 3.1E-154 T 23-04-2016 LT40_RS13090 bca0766c9d0d052d57e5ddf5153e9f8c 328 SMART SM00382 46 239 1.7E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS13090 bca0766c9d0d052d57e5ddf5153e9f8c 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 5.2E-18 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS13090 bca0766c9d0d052d57e5ddf5153e9f8c 328 Gene3D G3DSA:3.40.50.300 5 263 2.1E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13090 bca0766c9d0d052d57e5ddf5153e9f8c 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 325 1.8E-26 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS13090 bca0766c9d0d052d57e5ddf5153e9f8c 328 SUPERFAMILY SSF52540 27 260 3.77E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13090 bca0766c9d0d052d57e5ddf5153e9f8c 328 PANTHER PTHR24220:SF336 8 18 3.1E-154 T 23-04-2016 LT40_RS13090 bca0766c9d0d052d57e5ddf5153e9f8c 328 PANTHER PTHR24220:SF336 34 325 3.1E-154 T 23-04-2016 LT40_RS13090 bca0766c9d0d052d57e5ddf5153e9f8c 328 Pfam PF00005 ABC transporter 38 189 8.3E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS13090 bca0766c9d0d052d57e5ddf5153e9f8c 328 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 Pfam PF01645 Conserved region in glutamate synthase 793 1157 1.5E-147 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 Pfam PF04898 Glutamate synthase central domain 459 737 5.5E-103 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 Gene3D G3DSA:3.20.20.70 809 1188 1.2E-161 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 Gene3D G3DSA:2.160.20.60 1212 1467 5.8E-93 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 Gene3D G3DSA:3.60.20.10 15 437 7.9E-164 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 SUPERFAMILY SSF51395 444 1188 3.7E-250 T 23-04-2016 LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 PANTHER PTHR11938:SF1 4 1479 0.0 T 23-04-2016 LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 Gene3D G3DSA:3.20.20.70 439 777 6.2E-96 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 SUPERFAMILY SSF69336 1212 1467 1.07E-87 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 SUPERFAMILY SSF56235 15 431 1.54E-143 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 Pfam PF00310 Glutamine amidotransferases class-II 15 428 4.8E-172 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 Pfam PF01493 GXGXG motif 1236 1423 7.6E-77 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 LT40_RS14195 4f2dc4554ff40ecbea2d71d33886b3c3 1482 PANTHER PTHR11938 4 1479 0.0 T 23-04-2016 LT40_RS08150 e8aae016316969e156621ea33fa301dc 157 PANTHER PTHR31757:SF0 1 157 1.8E-89 T 23-04-2016 LT40_RS08150 e8aae016316969e156621ea33fa301dc 157 PANTHER PTHR31757 1 157 1.8E-89 T 23-04-2016 LT40_RS08150 e8aae016316969e156621ea33fa301dc 157 SUPERFAMILY SSF54427 4 157 2.24E-79 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS08150 e8aae016316969e156621ea33fa301dc 157 Pfam PF07080 Protein of unknown function (DUF1348) 6 147 1.9E-72 T 23-04-2016 IPR009783 Protein of unknown function DUF1348 LT40_RS08150 e8aae016316969e156621ea33fa301dc 157 Gene3D G3DSA:3.10.450.50 14 156 6.1E-75 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS14280 0ac45814d5e8a7632d95c339c6058a50 176 SUPERFAMILY SSF56235 2 170 3.66E-56 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS14280 0ac45814d5e8a7632d95c339c6058a50 176 Pfam PF00227 Proteasome subunit 2 169 1.6E-19 T 23-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 LT40_RS14280 0ac45814d5e8a7632d95c339c6058a50 176 PANTHER PTHR32194 2 171 1.9E-120 T 23-04-2016 LT40_RS14280 0ac45814d5e8a7632d95c339c6058a50 176 PIRSF PIRSF039093 1 175 4.1E-84 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 LT40_RS14280 0ac45814d5e8a7632d95c339c6058a50 176 Gene3D G3DSA:3.60.20.10 2 171 4.9E-82 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS14280 0ac45814d5e8a7632d95c339c6058a50 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 171 3.1E-84 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 LT40_RS14280 0ac45814d5e8a7632d95c339c6058a50 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 40.966 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 Pfam PF00691 OmpA family 130 226 3.0E-23 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 Gene3D G3DSA:4.10.1080.10 72 99 1.1E-4 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 SUPERFAMILY SSF103647 70 104 1.02E-8 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 PANTHER PTHR30128 73 233 6.5E-41 T 23-04-2016 LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 176 193 6.6E-5 T 23-04-2016 LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 117 144 6.6E-5 T 23-04-2016 LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 215 234 6.6E-5 T 23-04-2016 LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 SUPERFAMILY SSF103088 102 232 4.05E-35 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 Gene3D G3DSA:3.30.1330.60 120 232 2.2E-38 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 PRINTS PR01021 OMPA domain signature 130 152 1.3E-18 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 PRINTS PR01021 OMPA domain signature 161 176 1.3E-18 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 PRINTS PR01021 OMPA domain signature 176 192 1.3E-18 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS00800 9396101feba83e2dbf9217930ab8de8c 234 PANTHER PTHR30128:SF10 73 233 6.5E-41 T 23-04-2016 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 SUPERFAMILY SSF51905 202 331 2.54E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 SUPERFAMILY SSF51905 4 165 2.54E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 2.0E-10 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 2.0E-10 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 295 313 2.0E-10 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 319 7.5E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 PANTHER PTHR22912 1 179 4.7E-42 T 23-04-2016 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 PANTHER PTHR22912 200 323 4.7E-42 T 23-04-2016 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 PIRSF PIRSF037495 1 458 5.4E-153 T 23-04-2016 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 Gene3D G3DSA:3.50.50.60 261 331 2.6E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 Gene3D G3DSA:3.50.50.60 4 123 2.6E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 Pfam PF04324 BFD-like [2Fe-2S] binding domain 377 429 4.0E-7 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 PANTHER PTHR22912:SF141 1 179 4.7E-42 T 23-04-2016 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 PANTHER PTHR22912:SF141 200 323 4.7E-42 T 23-04-2016 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.4E-9 T 23-04-2016 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 1.4E-9 T 23-04-2016 LT40_RS09900 1b2127301d0e12be138d60ce04d3b102 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 1.4E-9 T 23-04-2016 LT40_RS02330 431ac587c9ac38d14f4bd587e1b274a7 231 PANTHER PTHR34933 1 231 1.1E-105 T 23-04-2016 LT40_RS02330 431ac587c9ac38d14f4bd587e1b274a7 231 Pfam PF02107 Flagellar L-ring protein 44 228 2.2E-59 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LT40_RS02330 431ac587c9ac38d14f4bd587e1b274a7 231 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 228 30.107 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LT40_RS02330 431ac587c9ac38d14f4bd587e1b274a7 231 PRINTS PR01008 Flagellar L-ring protein signature 191 205 1.7E-25 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LT40_RS02330 431ac587c9ac38d14f4bd587e1b274a7 231 PRINTS PR01008 Flagellar L-ring protein signature 66 78 1.7E-25 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LT40_RS02330 431ac587c9ac38d14f4bd587e1b274a7 231 PRINTS PR01008 Flagellar L-ring protein signature 207 221 1.7E-25 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LT40_RS02330 431ac587c9ac38d14f4bd587e1b274a7 231 PRINTS PR01008 Flagellar L-ring protein signature 170 186 1.7E-25 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LT40_RS02330 431ac587c9ac38d14f4bd587e1b274a7 231 PRINTS PR01008 Flagellar L-ring protein signature 144 159 1.7E-25 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 LT40_RS02330 431ac587c9ac38d14f4bd587e1b274a7 231 PANTHER PTHR34933:SF2 1 231 1.1E-105 T 23-04-2016 LT40_RS03200 1f5789dd15130aeebecb94921e325eb0 173 Gene3D G3DSA:1.10.1740.10 6 74 1.6E-13 T 23-04-2016 LT40_RS03200 1f5789dd15130aeebecb94921e325eb0 173 SUPERFAMILY SSF88946 10 87 1.45E-14 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS03200 1f5789dd15130aeebecb94921e325eb0 173 Gene3D G3DSA:1.10.10.10 106 155 8.6E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03200 1f5789dd15130aeebecb94921e325eb0 173 Pfam PF08281 Sigma-70, region 4 112 157 2.4E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS03200 1f5789dd15130aeebecb94921e325eb0 173 PANTHER PTHR30173 17 162 1.7E-24 T 23-04-2016 LT40_RS03200 1f5789dd15130aeebecb94921e325eb0 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 160 5.0E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS03200 1f5789dd15130aeebecb94921e325eb0 173 Pfam PF04542 Sigma-70 region 2 17 74 1.7E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS03200 1f5789dd15130aeebecb94921e325eb0 173 SUPERFAMILY SSF88659 95 160 3.66E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS02465 2d8e67dd42697742f678ba01293d9f2a 147 Pfam PF04347 Flagellar biosynthesis protein, FliO 59 139 1.3E-20 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 LT40_RS02465 2d8e67dd42697742f678ba01293d9f2a 147 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 47 113 4.8E-21 T 23-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 LT40_RS02465 2d8e67dd42697742f678ba01293d9f2a 147 PANTHER PTHR38766:SF1 4 147 1.4E-26 T 23-04-2016 LT40_RS02465 2d8e67dd42697742f678ba01293d9f2a 147 PANTHER PTHR38766 4 147 1.4E-26 T 23-04-2016 LT40_RS09925 ce5889cd601373ef9bf691288e362ad4 357 PANTHER PTHR24220 5 287 2.1E-124 T 23-04-2016 LT40_RS09925 ce5889cd601373ef9bf691288e362ad4 357 SUPERFAMILY SSF52540 4 240 8.49E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09925 ce5889cd601373ef9bf691288e362ad4 357 SUPERFAMILY SSF50331 237 349 7.37E-12 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS09925 ce5889cd601373ef9bf691288e362ad4 357 Pfam PF08402 TOBE domain 277 348 1.4E-9 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LT40_RS09925 ce5889cd601373ef9bf691288e362ad4 357 Pfam PF00005 ABC transporter 20 161 1.6E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS09925 ce5889cd601373ef9bf691288e362ad4 357 Gene3D G3DSA:3.40.50.300 4 234 1.1E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09925 ce5889cd601373ef9bf691288e362ad4 357 SMART SM00382 28 211 1.1E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS09925 ce5889cd601373ef9bf691288e362ad4 357 PANTHER PTHR24220:SF481 5 287 2.1E-124 T 23-04-2016 LT40_RS09925 ce5889cd601373ef9bf691288e362ad4 357 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS19170 5a29738b19d0faf20fb4b6ddb32da3cf 289 Gene3D G3DSA:3.10.129.10 5 115 1.7E-47 T 23-04-2016 IPR029069 HotDog domain LT40_RS19170 5a29738b19d0faf20fb4b6ddb32da3cf 289 Pfam PF13622 Thioesterase-like superfamily 33 282 1.8E-57 T 23-04-2016 LT40_RS19170 5a29738b19d0faf20fb4b6ddb32da3cf 289 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 5.3E-88 T 23-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 LT40_RS19170 5a29738b19d0faf20fb4b6ddb32da3cf 289 PANTHER PTHR11066 5 287 2.3E-112 T 23-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 LT40_RS19170 5a29738b19d0faf20fb4b6ddb32da3cf 289 SUPERFAMILY SSF54637 117 283 1.23E-54 T 23-04-2016 IPR029069 HotDog domain LT40_RS19170 5a29738b19d0faf20fb4b6ddb32da3cf 289 SUPERFAMILY SSF54637 4 114 5.97E-40 T 23-04-2016 IPR029069 HotDog domain LT40_RS19170 5a29738b19d0faf20fb4b6ddb32da3cf 289 PANTHER PTHR11066:SF34 5 287 2.3E-112 T 23-04-2016 LT40_RS19170 5a29738b19d0faf20fb4b6ddb32da3cf 289 Gene3D G3DSA:3.10.129.10 126 285 5.0E-53 T 23-04-2016 IPR029069 HotDog domain LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 SUPERFAMILY SSF118215 11 403 8.24E-120 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 Gene3D G3DSA:1.10.3860.10 8 409 6.5E-119 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 4 430 37.744 T 23-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 38 53 - T 23-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 23-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 PANTHER PTHR11958 7 439 1.6E-250 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 PANTHER PTHR11958:SF49 7 439 1.6E-250 T 23-04-2016 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 Pfam PF00375 Sodium:dicarboxylate symporter family 11 403 2.0E-113 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 3.5E-36 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 3.5E-36 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 3.5E-36 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 3.5E-36 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 3.5E-36 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 3.5E-36 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS06630 6af7698eaea074208c7cea32e3ea2294 452 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 3.5E-36 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS09980 29637aee2aa8d5c29fa16819f9da83d4 300 PANTHER PTHR30293:SF2 2 284 4.9E-78 T 23-04-2016 LT40_RS09980 29637aee2aa8d5c29fa16819f9da83d4 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.7E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS09980 29637aee2aa8d5c29fa16819f9da83d4 300 Pfam PF03466 LysR substrate binding domain 93 282 3.6E-13 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS09980 29637aee2aa8d5c29fa16819f9da83d4 300 Gene3D G3DSA:1.10.10.10 2 78 1.3E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09980 29637aee2aa8d5c29fa16819f9da83d4 300 SUPERFAMILY SSF46785 2 85 2.94E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09980 29637aee2aa8d5c29fa16819f9da83d4 300 SUPERFAMILY SSF53850 87 291 2.71E-29 T 23-04-2016 LT40_RS09980 29637aee2aa8d5c29fa16819f9da83d4 300 Gene3D G3DSA:3.40.190.10 79 200 1.9E-4 T 23-04-2016 LT40_RS09980 29637aee2aa8d5c29fa16819f9da83d4 300 Gene3D G3DSA:3.40.190.10 201 252 3.1E-7 T 23-04-2016 LT40_RS09980 29637aee2aa8d5c29fa16819f9da83d4 300 PANTHER PTHR30293 2 284 4.9E-78 T 23-04-2016 LT40_RS04920 c092451b038f37c7878f24df40adb43c 156 Pfam PF00210 Ferritin-like domain 17 155 8.6E-28 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LT40_RS04920 c092451b038f37c7878f24df40adb43c 156 Gene3D G3DSA:1.20.1260.10 2 155 4.4E-66 T 23-04-2016 IPR012347 Ferritin-related LT40_RS04920 c092451b038f37c7878f24df40adb43c 156 PANTHER PTHR30295 5 156 4.2E-68 T 23-04-2016 LT40_RS04920 c092451b038f37c7878f24df40adb43c 156 SUPERFAMILY SSF47240 5 155 1.46E-47 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS04920 c092451b038f37c7878f24df40adb43c 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 132 150 9.1E-12 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LT40_RS04920 c092451b038f37c7878f24df40adb43c 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 61 77 9.1E-12 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LT40_RS04920 c092451b038f37c7878f24df40adb43c 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 37 53 9.1E-12 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LT40_RS04920 c092451b038f37c7878f24df40adb43c 156 PANTHER PTHR30295:SF6 5 156 4.2E-68 T 23-04-2016 LT40_RS04920 c092451b038f37c7878f24df40adb43c 156 PIRSF PIRSF005900 1 156 2.4E-47 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LT40_RS04920 c092451b038f37c7878f24df40adb43c 156 ProSitePatterns PS00819 Dps protein family signature 2. 63 77 - T 23-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 LT40_RS04920 c092451b038f37c7878f24df40adb43c 156 ProSitePatterns PS00818 Dps protein family signature 1. 37 53 - T 23-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 LT40_RS19160 79c3bac8e2b432cf048b377d3090ecd2 221 PANTHER PTHR11751 14 100 3.3E-24 T 23-04-2016 LT40_RS19160 79c3bac8e2b432cf048b377d3090ecd2 221 Gene3D G3DSA:1.10.10.10 8 75 1.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS19160 79c3bac8e2b432cf048b377d3090ecd2 221 SUPERFAMILY SSF46785 8 92 3.02E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS19160 79c3bac8e2b432cf048b377d3090ecd2 221 SUPERFAMILY SSF48008 81 215 4.71E-23 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS19160 79c3bac8e2b432cf048b377d3090ecd2 221 SMART SM00895 84 206 2.2E-11 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS19160 79c3bac8e2b432cf048b377d3090ecd2 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 74 1.5E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS19160 79c3bac8e2b432cf048b377d3090ecd2 221 Gene3D G3DSA:1.20.120.530 77 217 1.8E-35 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS19160 79c3bac8e2b432cf048b377d3090ecd2 221 Pfam PF07729 FCD domain 84 204 3.7E-12 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS19160 79c3bac8e2b432cf048b377d3090ecd2 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 9.41E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS19160 79c3bac8e2b432cf048b377d3090ecd2 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 9.41E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS19160 79c3bac8e2b432cf048b377d3090ecd2 221 SMART SM00345 16 74 4.6E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS08485 0fc8df13bad76adf191e3df3c120186a 468 Gene3D G3DSA:2.20.200.10 94 138 5.3E-19 T 23-04-2016 LT40_RS08485 0fc8df13bad76adf191e3df3c120186a 468 Gene3D G3DSA:2.20.200.10 313 348 5.3E-19 T 23-04-2016 LT40_RS08485 0fc8df13bad76adf191e3df3c120186a 468 PANTHER PTHR30203:SF3 4 464 5.5E-135 T 23-04-2016 LT40_RS08485 0fc8df13bad76adf191e3df3c120186a 468 PANTHER PTHR30203 4 464 5.5E-135 T 23-04-2016 LT40_RS08485 0fc8df13bad76adf191e3df3c120186a 468 Gene3D G3DSA:1.20.1600.10 46 84 3.8E-90 T 23-04-2016 LT40_RS08485 0fc8df13bad76adf191e3df3c120186a 468 Gene3D G3DSA:1.20.1600.10 139 312 3.8E-90 T 23-04-2016 LT40_RS08485 0fc8df13bad76adf191e3df3c120186a 468 Gene3D G3DSA:1.20.1600.10 350 464 3.8E-90 T 23-04-2016 LT40_RS08485 0fc8df13bad76adf191e3df3c120186a 468 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 463 4.4E-103 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LT40_RS08485 0fc8df13bad76adf191e3df3c120186a 468 SUPERFAMILY SSF56954 1 466 1.11E-103 T 23-04-2016 LT40_RS08485 0fc8df13bad76adf191e3df3c120186a 468 Pfam PF02321 Outer membrane efflux protein 59 250 9.4E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS08485 0fc8df13bad76adf191e3df3c120186a 468 Pfam PF02321 Outer membrane efflux protein 280 461 8.6E-23 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 SUPERFAMILY SSF54791 556 641 6.13E-24 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Gene3D G3DSA:3.30.230.70 314 543 2.2E-90 T 23-04-2016 IPR027408 PNPase/RNase PH domain LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Gene3D G3DSA:3.30.230.70 3 226 4.9E-79 T 23-04-2016 IPR027408 PNPase/RNase PH domain LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 SUPERFAMILY SSF55666 451 550 1.68E-28 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Pfam PF00575 S1 RNA binding domain 620 691 2.3E-16 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 SUPERFAMILY SSF55666 145 237 3.4E-26 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Pfam PF03725 3' exoribonuclease family, domain 2 460 529 1.0E-5 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Pfam PF03725 3' exoribonuclease family, domain 2 147 211 1.2E-11 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Gene3D G3DSA:1.10.10.400 240 313 4.8E-22 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 SUPERFAMILY SSF54211 4 144 1.72E-47 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 SUPERFAMILY SSF50249 615 693 1.36E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 PANTHER PTHR11252 2 693 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 321 1.1E-22 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 692 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 SUPERFAMILY SSF54211 294 489 9.11E-51 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.227 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 PIRSF PIRSF005499 1 700 6.9E-287 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Gene3D G3DSA:2.40.50.140 624 693 5.4E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 3.5E-20 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 5.6E-23 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Pfam PF00013 KH domain 559 613 7.5E-13 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 PANTHER PTHR11252:SF0 2 693 0.0 T 23-04-2016 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 SMART SM00316 621 691 6.9E-24 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 Gene3D G3DSA:3.30.1370.10 553 623 3.8E-24 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 LT40_RS12865 f97bfc19c336d08b754409de0a634c8b 701 SMART SM00322 553 618 1.1E-13 T 23-04-2016 IPR004087 K Homology domain GO:0003676 LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 PANTHER PTHR30537:SF26 2 296 3.4E-78 T 23-04-2016 LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 Gene3D G3DSA:1.10.10.10 6 86 3.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 SUPERFAMILY SSF53850 86 295 7.24E-34 T 23-04-2016 LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 Gene3D G3DSA:3.40.190.10 98 182 5.6E-22 T 23-04-2016 LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 Gene3D G3DSA:3.40.190.10 183 265 1.5E-22 T 23-04-2016 LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 PANTHER PTHR30537 2 296 3.4E-78 T 23-04-2016 LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 2.2E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 SUPERFAMILY SSF46785 7 85 5.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 Pfam PF03466 LysR substrate binding domain 94 294 1.3E-31 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 4.9E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 4.9E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS06280 7c225d0a8551a1770580938161f12ffa 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 4.9E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS19005 762dc1a5ee444367a089b46897b8376d 176 Pfam PF00583 Acetyltransferase (GNAT) family 68 152 4.6E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS19005 762dc1a5ee444367a089b46897b8376d 176 PANTHER PTHR23091:SF258 3 156 1.8E-22 T 23-04-2016 LT40_RS19005 762dc1a5ee444367a089b46897b8376d 176 Gene3D G3DSA:3.40.630.30 6 167 1.2E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS19005 762dc1a5ee444367a089b46897b8376d 176 PANTHER PTHR23091 3 156 1.8E-22 T 23-04-2016 LT40_RS19005 762dc1a5ee444367a089b46897b8376d 176 SUPERFAMILY SSF55729 7 158 2.09E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 PANTHER PTHR10283:SF21 1 427 7.5E-153 T 23-04-2016 LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 Pfam PF02040 Arsenical pump membrane protein 4 423 1.7E-159 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 8.8E-112 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 8.8E-112 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 8.8E-112 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 8.8E-112 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 8.8E-112 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 8.8E-112 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 8.8E-112 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 8.8E-112 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 427 3.3E-209 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS04690 0bbfb55a00fa74713e51b1061010de64 429 PANTHER PTHR10283 1 427 7.5E-153 T 23-04-2016 LT40_RS07355 b8eebd20bbe62ebbefce9690262c8498 291 PANTHER PTHR30151:SF7 24 287 2.4E-109 T 23-04-2016 LT40_RS07355 b8eebd20bbe62ebbefce9690262c8498 291 SUPERFAMILY SSF161098 92 276 3.53E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS07355 b8eebd20bbe62ebbefce9690262c8498 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 284 6.3E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS07355 b8eebd20bbe62ebbefce9690262c8498 291 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 79 280 4.0E-97 T 23-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 LT40_RS07355 b8eebd20bbe62ebbefce9690262c8498 291 Gene3D G3DSA:1.10.3720.10 89 279 6.5E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS07355 b8eebd20bbe62ebbefce9690262c8498 291 PANTHER PTHR30151 24 287 2.4E-109 T 23-04-2016 LT40_RS15455 093466227c2c372a997080e6d143feb7 479 PANTHER PTHR30203 1 470 8.9E-145 T 23-04-2016 LT40_RS15455 093466227c2c372a997080e6d143feb7 479 PANTHER PTHR30203:SF5 1 470 8.9E-145 T 23-04-2016 LT40_RS15455 093466227c2c372a997080e6d143feb7 479 SUPERFAMILY SSF56954 59 470 8.76E-88 T 23-04-2016 LT40_RS15455 093466227c2c372a997080e6d143feb7 479 SUPERFAMILY SSF56954 4 29 8.76E-88 T 23-04-2016 LT40_RS15455 093466227c2c372a997080e6d143feb7 479 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 468 1.4E-85 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LT40_RS15455 093466227c2c372a997080e6d143feb7 479 Pfam PF02321 Outer membrane efflux protein 68 257 1.2E-21 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS15455 093466227c2c372a997080e6d143feb7 479 Pfam PF02321 Outer membrane efflux protein 288 466 1.1E-20 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS15455 093466227c2c372a997080e6d143feb7 479 Gene3D G3DSA:1.20.1600.10 57 471 5.2E-89 T 23-04-2016 LT40_RS08200 938ae61f1a5401462e379c263e3d5cad 371 PANTHER PTHR13847:SF189 2 365 3.0E-87 T 23-04-2016 LT40_RS08200 938ae61f1a5401462e379c263e3d5cad 371 SUPERFAMILY SSF54373 227 305 1.7E-11 T 23-04-2016 LT40_RS08200 938ae61f1a5401462e379c263e3d5cad 371 Gene3D G3DSA:3.30.9.10 86 138 6.4E-11 T 23-04-2016 LT40_RS08200 938ae61f1a5401462e379c263e3d5cad 371 Gene3D G3DSA:3.30.9.10 208 304 6.4E-11 T 23-04-2016 LT40_RS08200 938ae61f1a5401462e379c263e3d5cad 371 PANTHER PTHR13847 2 365 3.0E-87 T 23-04-2016 LT40_RS08200 938ae61f1a5401462e379c263e3d5cad 371 SUPERFAMILY SSF51905 307 366 4.66E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08200 938ae61f1a5401462e379c263e3d5cad 371 SUPERFAMILY SSF51905 8 210 4.66E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08200 938ae61f1a5401462e379c263e3d5cad 371 Gene3D G3DSA:3.50.50.60 4 81 1.0E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08200 938ae61f1a5401462e379c263e3d5cad 371 Gene3D G3DSA:3.50.50.60 307 364 1.0E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08200 938ae61f1a5401462e379c263e3d5cad 371 Gene3D G3DSA:3.50.50.60 139 207 1.0E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08200 938ae61f1a5401462e379c263e3d5cad 371 Pfam PF01266 FAD dependent oxidoreductase 8 344 9.3E-53 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 928 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 SUPERFAMILY SSF50677 188 362 7.19E-59 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 Pfam PF08264 Anticodon-binding domain of tRNA 669 820 1.5E-44 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PANTHER PTHR11946:SF5 877 941 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PANTHER PTHR11946:SF5 330 567 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PANTHER PTHR11946:SF5 1 311 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PANTHER PTHR11946:SF5 605 857 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 Gene3D G3DSA:3.40.50.620 361 568 3.3E-140 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 Gene3D G3DSA:3.40.50.620 606 627 3.3E-140 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 Gene3D G3DSA:3.40.50.620 3 190 3.3E-140 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 881 944 3.5E-18 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PRINTS PR00986 Valyl-tRNA synthetase signature 466 487 1.6E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PRINTS PR00986 Valyl-tRNA synthetase signature 366 379 1.6E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PRINTS PR00986 Valyl-tRNA synthetase signature 497 515 1.6E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 1.6E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 1.6E-34 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 SUPERFAMILY SSF52374 606 638 4.86E-136 T 23-04-2016 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 SUPERFAMILY SSF52374 1 189 4.86E-136 T 23-04-2016 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 SUPERFAMILY SSF52374 361 568 4.86E-136 T 23-04-2016 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 946 16.116 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 Gene3D G3DSA:1.10.730.10 628 813 1.3E-67 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 Gene3D G3DSA:3.90.740.10 191 356 3.9E-46 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 SUPERFAMILY SSF46589 881 945 4.24E-17 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 SUPERFAMILY SSF47323 639 896 3.18E-71 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PANTHER PTHR11946 877 941 0.0 T 23-04-2016 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PANTHER PTHR11946 330 567 0.0 T 23-04-2016 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PANTHER PTHR11946 1 311 0.0 T 23-04-2016 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 PANTHER PTHR11946 605 857 0.0 T 23-04-2016 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 Gene3D G3DSA:1.10.287.380 875 945 1.3E-8 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 LT40_RS03120 bdc6ecdda22d10f06556023698f51904 948 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 628 9.9E-212 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04335 9e645cb324f0fcab4b290af7676706c5 286 SUPERFAMILY SSF100950 4 278 5.68E-77 T 23-04-2016 LT40_RS04335 9e645cb324f0fcab4b290af7676706c5 286 SMART SM00882 4 224 1.1E-43 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 LT40_RS04335 9e645cb324f0fcab4b290af7676706c5 286 PANTHER PTHR13707:SF33 1 265 1.6E-135 T 23-04-2016 LT40_RS04335 9e645cb324f0fcab4b290af7676706c5 286 Gene3D G3DSA:3.40.1080.10 4 120 5.3E-85 T 23-04-2016 LT40_RS04335 9e645cb324f0fcab4b290af7676706c5 286 Gene3D G3DSA:3.40.1080.10 158 280 5.3E-85 T 23-04-2016 LT40_RS04335 9e645cb324f0fcab4b290af7676706c5 286 PANTHER PTHR13707 1 265 1.6E-135 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 LT40_RS04335 9e645cb324f0fcab4b290af7676706c5 286 Pfam PF01144 Coenzyme A transferase 6 214 8.2E-24 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.2E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.2E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.2E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.2E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 2.2E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 2.2E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.2E-79 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 2.0E-37 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 Gene3D G3DSA:3.40.192.10 7 140 2.2E-49 T 23-04-2016 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 7.8E-66 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 SUPERFAMILY SSF53223 1 122 1.82E-38 T 23-04-2016 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.14 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 PANTHER PTHR10025 1 284 2.1E-167 T 23-04-2016 LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 SUPERFAMILY SSF51735 123 282 9.83E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02070 c63f3a242b415aebb0907159faaab70c 284 Gene3D G3DSA:3.40.50.720 141 264 2.4E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11555 68a544b6ca11dfcb2315a483c79d031b 299 Pfam PF03466 LysR substrate binding domain 89 280 4.7E-35 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS11555 68a544b6ca11dfcb2315a483c79d031b 299 SUPERFAMILY SSF46785 1 111 1.17E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11555 68a544b6ca11dfcb2315a483c79d031b 299 SUPERFAMILY SSF53850 90 291 1.9E-36 T 23-04-2016 LT40_RS11555 68a544b6ca11dfcb2315a483c79d031b 299 PANTHER PTHR30126 1 276 1.3E-54 T 23-04-2016 LT40_RS11555 68a544b6ca11dfcb2315a483c79d031b 299 Gene3D G3DSA:3.40.190.10 91 187 1.3E-14 T 23-04-2016 LT40_RS11555 68a544b6ca11dfcb2315a483c79d031b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 8.7E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11555 68a544b6ca11dfcb2315a483c79d031b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.8E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11555 68a544b6ca11dfcb2315a483c79d031b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.8E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11555 68a544b6ca11dfcb2315a483c79d031b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.8E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11555 68a544b6ca11dfcb2315a483c79d031b 299 Gene3D G3DSA:1.10.10.10 1 80 4.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11555 68a544b6ca11dfcb2315a483c79d031b 299 Gene3D G3DSA:3.40.190.10 188 261 3.2E-11 T 23-04-2016 LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 SUPERFAMILY SSF52540 8 231 3.27E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 SMART SM00382 46 182 3.9E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 PANTHER PTHR13779 11 441 2.5E-193 T 23-04-2016 LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 Gene3D G3DSA:3.40.50.300 10 151 8.2E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 Pfam PF12002 MgsA AAA+ ATPase C terminal 261 427 2.5E-66 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 Gene3D G3DSA:1.20.272.10 242 340 2.7E-43 T 23-04-2016 LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 Pfam PF16193 AAA C-terminal domain 184 260 5.1E-21 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 Gene3D G3DSA:1.10.3710.10 341 437 1.8E-33 T 23-04-2016 LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 PANTHER PTHR13779:SF7 11 441 2.5E-193 T 23-04-2016 LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 Gene3D G3DSA:1.10.8.60 152 235 9.2E-11 T 23-04-2016 LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 157 4.0E-15 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS11265 99182e68aec017451ddac19e47c9c0eb 441 SUPERFAMILY SSF48019 245 427 2.68E-74 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 LT40_RS12090 90ba3ab11ef933f8c72601b9f5d94b8f 232 PANTHER PTHR24220 13 229 1.0E-116 T 23-04-2016 LT40_RS12090 90ba3ab11ef933f8c72601b9f5d94b8f 232 Gene3D G3DSA:3.40.50.300 11 230 3.9E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12090 90ba3ab11ef933f8c72601b9f5d94b8f 232 SMART SM00382 40 228 2.7E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS12090 90ba3ab11ef933f8c72601b9f5d94b8f 232 SUPERFAMILY SSF52540 11 231 6.05E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12090 90ba3ab11ef933f8c72601b9f5d94b8f 232 Pfam PF00005 ABC transporter 31 179 8.3E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS12090 90ba3ab11ef933f8c72601b9f5d94b8f 232 PANTHER PTHR24220:SF111 13 229 1.0E-116 T 23-04-2016 LT40_RS12090 90ba3ab11ef933f8c72601b9f5d94b8f 232 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 11 230 2.2E-98 T 23-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 LT40_RS12090 90ba3ab11ef933f8c72601b9f5d94b8f 232 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 SUPERFAMILY SSF53738 636 741 5.89E-34 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 389 509 5.7E-31 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 Gene3D G3DSA:3.30.310.50 748 837 2.6E-27 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 PANTHER PTHR22573 367 838 1.7E-197 T 23-04-2016 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 611 626 2.0E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 582 595 2.0E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 477 491 2.0E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 548 567 2.0E-22 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 SUPERFAMILY SSF53738 532 633 2.94E-32 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 478 487 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 Gene3D G3DSA:3.40.120.10 389 527 5.7E-32 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 535 631 1.9E-28 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 SUPERFAMILY SSF53738 389 525 7.85E-37 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 751 821 2.9E-10 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 SUPERFAMILY SSF55957 746 839 5.93E-23 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 Gene3D G3DSA:3.40.120.10 629 743 3.1E-45 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 PANTHER PTHR22573:SF28 367 838 1.7E-197 T 23-04-2016 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 636 742 1.3E-22 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS16525 2758c1bf64c23e0ddb6760a9b8f45c7c 839 Gene3D G3DSA:3.40.120.10 550 627 1.0E-34 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS02200 5fda5f098bc74ab7f0758bd80ded50c1 234 Gene3D G3DSA:3.30.70.980 129 199 4.7E-18 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 LT40_RS02200 5fda5f098bc74ab7f0758bd80ded50c1 234 PANTHER PTHR12532 8 229 1.8E-68 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like LT40_RS02200 5fda5f098bc74ab7f0758bd80ded50c1 234 Gene3D G3DSA:3.30.1270.10 207 230 3.2E-24 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 LT40_RS02200 5fda5f098bc74ab7f0758bd80ded50c1 234 Gene3D G3DSA:3.30.1270.10 79 128 3.2E-24 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 LT40_RS02200 5fda5f098bc74ab7f0758bd80ded50c1 234 Pfam PF01709 Transcriptional regulator 8 229 2.2E-66 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like LT40_RS02200 5fda5f098bc74ab7f0758bd80ded50c1 234 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 234 24.541 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like LT40_RS02200 5fda5f098bc74ab7f0758bd80ded50c1 234 Gene3D G3DSA:1.10.10.200 19 73 1.2E-20 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like LT40_RS02200 5fda5f098bc74ab7f0758bd80ded50c1 234 SUPERFAMILY SSF75625 2 232 5.1E-67 T 23-04-2016 IPR029072 YebC-like LT40_RS13510 a80fc9989e11843ff90b1225b4a839a7 402 PANTHER PTHR14741 180 359 6.3E-51 T 23-04-2016 LT40_RS13510 a80fc9989e11843ff90b1225b4a839a7 402 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 7 189 1.2E-43 T 23-04-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 LT40_RS13510 a80fc9989e11843ff90b1225b4a839a7 402 Gene3D G3DSA:3.30.950.10 107 206 8.7E-26 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 LT40_RS13510 a80fc9989e11843ff90b1225b4a839a7 402 PIRSF PIRSF036428 1 399 3.2E-141 T 23-04-2016 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|KEGG: 00860+2.1.1.132|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00148 LT40_RS13510 a80fc9989e11843ff90b1225b4a839a7 402 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 229 350 6.1E-35 T 23-04-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 LT40_RS13510 a80fc9989e11843ff90b1225b4a839a7 402 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 184 1.3E-17 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS13510 a80fc9989e11843ff90b1225b4a839a7 402 SUPERFAMILY SSF53335 203 375 9.97E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS13510 a80fc9989e11843ff90b1225b4a839a7 402 PANTHER PTHR14741:SF34 180 359 6.3E-51 T 23-04-2016 LT40_RS13510 a80fc9989e11843ff90b1225b4a839a7 402 SUPERFAMILY SSF53790 4 202 1.05E-36 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS13510 a80fc9989e11843ff90b1225b4a839a7 402 Gene3D G3DSA:3.40.1010.10 2 106 9.9E-21 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LT40_RS13510 a80fc9989e11843ff90b1225b4a839a7 402 Gene3D G3DSA:3.40.50.150 239 357 1.7E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS15570 628ed6caa15e5b475bc637dcacc3034b 477 Gene3D G3DSA:3.40.50.1220 302 477 1.5E-85 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS15570 628ed6caa15e5b475bc637dcacc3034b 477 PIRSF PIRSF000204 1 477 8.3E-212 T 23-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 LT40_RS15570 628ed6caa15e5b475bc637dcacc3034b 477 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 474 4.0E-184 T 23-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 LT40_RS15570 628ed6caa15e5b475bc637dcacc3034b 477 PANTHER PTHR10160 3 476 4.3E-222 T 23-04-2016 LT40_RS15570 628ed6caa15e5b475bc637dcacc3034b 477 PANTHER PTHR10160:SF24 3 476 4.3E-222 T 23-04-2016 LT40_RS15570 628ed6caa15e5b475bc637dcacc3034b 477 SUPERFAMILY SSF52467 305 477 9.56E-74 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS06130 b81fc5c96113f7c848c4627e7dc512a2 442 Gene3D G3DSA:2.30.40.10 373 411 1.4E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS06130 b81fc5c96113f7c848c4627e7dc512a2 442 Gene3D G3DSA:2.30.40.10 24 68 1.4E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS06130 b81fc5c96113f7c848c4627e7dc512a2 442 SUPERFAMILY SSF51556 66 365 1.45E-91 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS06130 b81fc5c96113f7c848c4627e7dc512a2 442 PANTHER PTHR11271 1 440 2.0E-185 T 23-04-2016 LT40_RS06130 b81fc5c96113f7c848c4627e7dc512a2 442 SUPERFAMILY SSF51338 9 66 3.73E-24 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS06130 b81fc5c96113f7c848c4627e7dc512a2 442 SUPERFAMILY SSF51338 364 438 3.73E-24 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS06130 b81fc5c96113f7c848c4627e7dc512a2 442 Gene3D G3DSA:3.20.20.140 69 372 4.0E-95 T 23-04-2016 LT40_RS06130 b81fc5c96113f7c848c4627e7dc512a2 442 Pfam PF01979 Amidohydrolase family 64 412 5.2E-70 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LT40_RS06130 b81fc5c96113f7c848c4627e7dc512a2 442 PANTHER PTHR11271:SF7 1 440 2.0E-185 T 23-04-2016 LT40_RS01910 d5f235fd2363aee267bd03c9c053af22 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 2.1E-42 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS01910 d5f235fd2363aee267bd03c9c053af22 161 Gene3D G3DSA:3.50.30.40 2 157 6.2E-52 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS01910 d5f235fd2363aee267bd03c9c053af22 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 2.3E-68 T 23-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 LT40_RS01910 d5f235fd2363aee267bd03c9c053af22 161 PANTHER PTHR33254 1 159 3.7E-91 T 23-04-2016 LT40_RS01910 d5f235fd2363aee267bd03c9c053af22 161 PANTHER PTHR33254:SF7 1 159 3.7E-91 T 23-04-2016 LT40_RS01910 d5f235fd2363aee267bd03c9c053af22 161 SUPERFAMILY SSF89562 1 157 8.89E-50 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 SMART SM00086 236 272 2.9E-4 T 23-04-2016 IPR001610 PAC motif LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 SUPERFAMILY SSF52172 546 666 1.24E-23 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 Gene3D G3DSA:3.40.50.2300 545 667 2.0E-30 T 23-04-2016 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 Pfam PF00512 His Kinase A (phospho-acceptor) domain 295 360 2.7E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 SMART SM00387 403 525 7.4E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 Gene3D G3DSA:3.30.450.20 173 288 1.6E-21 T 23-04-2016 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 PANTHER PTHR24423:SF438 35 667 2.8E-181 T 23-04-2016 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 SUPERFAMILY SSF55785 170 274 1.12E-22 T 23-04-2016 IPR000014 PAS domain LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 PANTHER PTHR24423 35 667 2.8E-181 T 23-04-2016 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 Gene3D G3DSA:3.30.450.20 46 151 7.2E-7 T 23-04-2016 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 Pfam PF00072 Response regulator receiver domain 549 657 3.3E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 SMART SM00448 547 660 5.5E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 SUPERFAMILY SSF47384 287 359 8.63E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 SMART SM00091 164 230 2.5E-8 T 23-04-2016 IPR000014 PAS domain LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 Gene3D G3DSA:3.30.565.10 362 524 4.6E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 3.7E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 522 3.7E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 3.7E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 503 3.7E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 166 275 3.0E-15 T 23-04-2016 IPR000014 PAS domain LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 Pfam PF08448 PAS fold 47 140 3.5E-5 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 Gene3D G3DSA:1.10.287.130 292 358 1.2E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 523 4.8E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 Pfam PF08447 PAS fold 188 261 8.9E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 SUPERFAMILY SSF55874 353 528 6.02E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS11530 f0fca9cda8671c145a290c5db5071b96 667 SMART SM00388 294 362 4.9E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.806 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.0E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.0E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.0E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.0E-39 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 PANTHER PTHR12220 1 137 1.0E-71 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.0E-47 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 SUPERFAMILY SSF54686 1 134 8.77E-52 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 Gene3D G3DSA:3.90.1170.10 23 134 2.1E-51 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18390 c8000b112b68fb159e885dc78666d58d 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.7E-59 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 Pfam PF00012 Hsp70 protein 299 395 7.0E-10 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 Pfam PF00012 Hsp70 protein 10 86 1.1E-4 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 Pfam PF00012 Hsp70 protein 100 230 5.5E-9 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 Gene3D G3DSA:3.30.420.40 185 225 1.5E-14 T 23-04-2016 LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 Gene3D G3DSA:3.30.420.40 356 396 1.5E-14 T 23-04-2016 LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 PANTHER PTHR19375:SF182 290 414 5.1E-116 T 23-04-2016 LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 PANTHER PTHR19375:SF182 7 240 5.1E-116 T 23-04-2016 LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 PRINTS PR00301 70kDa heat shock protein signature 36 48 2.2E-6 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 PRINTS PR00301 70kDa heat shock protein signature 190 200 2.2E-6 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 PRINTS PR00301 70kDa heat shock protein signature 8 21 2.2E-6 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 PRINTS PR00301 70kDa heat shock protein signature 124 144 2.2E-6 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 Gene3D G3DSA:3.30.420.40 9 72 1.2E-30 T 23-04-2016 LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 Gene3D G3DSA:3.30.420.40 105 184 1.2E-30 T 23-04-2016 LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 184 197 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 SUPERFAMILY SSF53067 179 247 3.24E-35 T 23-04-2016 LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 SUPERFAMILY SSF53067 296 416 3.24E-35 T 23-04-2016 LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 SUPERFAMILY SSF53067 10 175 4.14E-29 T 23-04-2016 LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 PANTHER PTHR19375 290 414 5.1E-116 T 23-04-2016 LT40_RS13600 3682c8301127e81dcac33d2e8acbfd2d 423 PANTHER PTHR19375 7 240 5.1E-116 T 23-04-2016 LT40_RS01660 89d52b16a8befda0a89c2e86e960fa17 311 PANTHER PTHR30537 4 306 1.2E-100 T 23-04-2016 LT40_RS01660 89d52b16a8befda0a89c2e86e960fa17 311 Gene3D G3DSA:3.40.190.10 97 173 2.1E-4 T 23-04-2016 LT40_RS01660 89d52b16a8befda0a89c2e86e960fa17 311 Pfam PF03466 LysR substrate binding domain 96 300 1.1E-40 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS01660 89d52b16a8befda0a89c2e86e960fa17 311 SUPERFAMILY SSF53850 96 302 7.78E-43 T 23-04-2016 LT40_RS01660 89d52b16a8befda0a89c2e86e960fa17 311 SUPERFAMILY SSF46785 13 119 6.53E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01660 89d52b16a8befda0a89c2e86e960fa17 311 PANTHER PTHR30537:SF5 4 306 1.2E-100 T 23-04-2016 LT40_RS01660 89d52b16a8befda0a89c2e86e960fa17 311 Gene3D G3DSA:1.10.10.10 13 91 3.6E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01660 89d52b16a8befda0a89c2e86e960fa17 311 Gene3D G3DSA:3.40.190.10 174 267 1.0E-25 T 23-04-2016 LT40_RS01660 89d52b16a8befda0a89c2e86e960fa17 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 69 1.0E-13 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01235 976a2c5eddcc29eb144e088af10f716b 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 225 9.4E-52 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS01235 976a2c5eddcc29eb144e088af10f716b 233 PANTHER PTHR32119 7 233 2.4E-107 T 23-04-2016 LT40_RS01235 976a2c5eddcc29eb144e088af10f716b 233 Gene3D G3DSA:3.20.20.70 5 231 4.8E-86 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS01235 976a2c5eddcc29eb144e088af10f716b 233 SMART SM00934 7 227 6.4E-96 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS01235 976a2c5eddcc29eb144e088af10f716b 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 59 72 - T 23-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS01235 976a2c5eddcc29eb144e088af10f716b 233 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 5 232 38.658 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS01235 976a2c5eddcc29eb144e088af10f716b 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 9 225 2.3E-57 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS01235 976a2c5eddcc29eb144e088af10f716b 233 PANTHER PTHR32119:SF2 7 233 2.4E-107 T 23-04-2016 LT40_RS01235 976a2c5eddcc29eb144e088af10f716b 233 SUPERFAMILY SSF51366 3 232 2.51E-71 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LT40_RS02575 e10d645c42bc907d2f870ed7c43ef58a 210 SMART SM00382 29 209 5.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02575 e10d645c42bc907d2f870ed7c43ef58a 210 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS02575 e10d645c42bc907d2f870ed7c43ef58a 210 PANTHER PTHR24220 6 191 5.4E-83 T 23-04-2016 LT40_RS02575 e10d645c42bc907d2f870ed7c43ef58a 210 SUPERFAMILY SSF52540 3 192 1.2E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02575 e10d645c42bc907d2f870ed7c43ef58a 210 Gene3D G3DSA:3.40.50.300 5 192 2.8E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02575 e10d645c42bc907d2f870ed7c43ef58a 210 PANTHER PTHR24220:SF508 6 191 5.4E-83 T 23-04-2016 LT40_RS02575 e10d645c42bc907d2f870ed7c43ef58a 210 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 5 203 1.0E-74 T 23-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 LT40_RS02575 e10d645c42bc907d2f870ed7c43ef58a 210 Pfam PF00005 ABC transporter 22 160 6.6E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 Gene3D G3DSA:2.70.20.10 213 245 2.8E-33 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 Gene3D G3DSA:2.70.20.10 361 478 2.8E-33 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 2.1E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 2.1E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 2.1E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 96 109 2.1E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 518 532 2.1E-26 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 SMART SM00493 1 122 1.8E-21 T 23-04-2016 IPR006171 Toprim domain LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 SMART SM00437 271 555 1.8E-72 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 Gene3D G3DSA:1.10.460.10 479 602 3.4E-50 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 Gene3D G3DSA:1.10.460.10 152 211 3.4E-50 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 SMART SM00436 122 217 1.6E-28 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 Pfam PF01751 Toprim domain 2 129 2.7E-18 T 23-04-2016 IPR006171 Toprim domain LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 620 1.1E-210 T 23-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 323 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 Pfam PF01131 DNA topoisomerase 149 589 4.9E-117 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 SUPERFAMILY SSF56712 1 602 1.31E-181 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 PANTHER PTHR11390 1 500 5.5E-153 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 PANTHER PTHR11390 518 602 5.5E-153 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS12145 22a7eb1309dddad2e312c51fdbcbaef4 633 Gene3D G3DSA:3.40.50.140 1 147 2.5E-48 T 23-04-2016 IPR006171 Toprim domain LT40_RS19535 937de523d8972e84bed023b9478cc36d 245 PANTHER PTHR30616 8 245 6.9E-128 T 23-04-2016 LT40_RS19535 937de523d8972e84bed023b9478cc36d 245 SUPERFAMILY SSF64438 8 244 1.15E-82 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic LT40_RS19535 937de523d8972e84bed023b9478cc36d 245 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 24 242 7.6E-72 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase LT40_RS19535 937de523d8972e84bed023b9478cc36d 245 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 243 6.5E-59 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase LT40_RS19535 937de523d8972e84bed023b9478cc36d 245 PANTHER PTHR30616:SF3 8 245 6.9E-128 T 23-04-2016 LT40_RS19535 937de523d8972e84bed023b9478cc36d 245 Gene3D G3DSA:3.60.140.10 8 244 5.5E-95 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase LT40_RS18790 bcbd2d3746d9f8beee70896335a23a15 229 PANTHER PTHR12039 18 229 1.3E-51 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 LT40_RS18790 bcbd2d3746d9f8beee70896335a23a15 229 Pfam PF01467 Cytidylyltransferase-like 23 199 4.1E-28 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LT40_RS18790 bcbd2d3746d9f8beee70896335a23a15 229 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 20 81 1.0E-8 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LT40_RS18790 bcbd2d3746d9f8beee70896335a23a15 229 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 22 225 2.6E-49 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 LT40_RS18790 bcbd2d3746d9f8beee70896335a23a15 229 Gene3D G3DSA:3.40.50.620 18 227 1.1E-65 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS18790 bcbd2d3746d9f8beee70896335a23a15 229 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 18 226 31.111 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 LT40_RS18790 bcbd2d3746d9f8beee70896335a23a15 229 SUPERFAMILY SSF52374 18 228 1.13E-50 T 23-04-2016 LT40_RS20425 6c07092318ca2bedd0c141774d45d5e2 537 SUPERFAMILY SSF81296 416 529 1.4E-26 T 23-04-2016 IPR014756 Immunoglobulin E-set LT40_RS20425 6c07092318ca2bedd0c141774d45d5e2 537 SUPERFAMILY SSF74650 41 413 8.16E-149 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LT40_RS20425 6c07092318ca2bedd0c141774d45d5e2 537 Gene3D G3DSA:2.60.40.10 416 536 1.9E-32 T 23-04-2016 IPR013783 Immunoglobulin-like fold LT40_RS20425 6c07092318ca2bedd0c141774d45d5e2 537 PIRSF PIRSF006281 1 530 3.6E-197 T 23-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 LT40_RS20425 6c07092318ca2bedd0c141774d45d5e2 537 PANTHER PTHR30504:SF3 1 537 2.9E-301 T 23-04-2016 LT40_RS20425 6c07092318ca2bedd0c141774d45d5e2 537 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 41 526 8.2E-182 T 23-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 LT40_RS20425 6c07092318ca2bedd0c141774d45d5e2 537 Gene3D G3DSA:2.70.98.10 40 413 4.1E-158 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 LT40_RS20425 6c07092318ca2bedd0c141774d45d5e2 537 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 536 58.882 T 23-04-2016 IPR023724 Glucan biosynthesis, MdoD UniPathway: UPA00637 LT40_RS20425 6c07092318ca2bedd0c141774d45d5e2 537 PANTHER PTHR30504 1 537 2.9E-301 T 23-04-2016 LT40_RS17610 cd4f03b55dd3b5c222f9a78fcf502c4f 114 SUPERFAMILY SSF143100 1 75 1.49E-6 T 23-04-2016 LT40_RS17610 cd4f03b55dd3b5c222f9a78fcf502c4f 114 Pfam PF05534 HicB family 56 105 6.9E-20 T 23-04-2016 IPR008651 Uncharacterised protein family HicB LT40_RS17610 cd4f03b55dd3b5c222f9a78fcf502c4f 114 SUPERFAMILY SSF47598 69 110 4.77E-9 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LT40_RS17610 cd4f03b55dd3b5c222f9a78fcf502c4f 114 Gene3D G3DSA:1.10.1220.10 73 110 5.9E-7 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 LT40_RS14320 c602e376e706a154e524092b3d99621a 111 PANTHER PTHR21256 3 109 5.6E-41 T 23-04-2016 LT40_RS14320 c602e376e706a154e524092b3d99621a 111 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 11 95 9.3E-14 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 LT40_RS14320 c602e376e706a154e524092b3d99621a 111 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 92 19.756 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 LT40_RS14320 c602e376e706a154e524092b3d99621a 111 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 5 92 4.4E-27 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 LT40_RS14320 c602e376e706a154e524092b3d99621a 111 SUPERFAMILY SSF101386 4 98 7.41E-23 T 23-04-2016 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 101 351 2.4E-46 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01180 Arginine decarboxylase signature 330 347 3.3E-69 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01180 Arginine decarboxylase signature 153 168 3.3E-69 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01180 Arginine decarboxylase signature 546 567 3.3E-69 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01180 Arginine decarboxylase signature 75 90 3.3E-69 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01180 Arginine decarboxylase signature 179 200 3.3E-69 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01180 Arginine decarboxylase signature 203 225 3.3E-69 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01180 Arginine decarboxylase signature 468 489 3.3E-69 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01180 Arginine decarboxylase signature 493 518 3.3E-69 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01180 Arginine decarboxylase signature 99 113 3.3E-69 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PANTHER PTHR11482 443 601 2.4E-252 T 23-04-2016 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PANTHER PTHR11482 1 373 2.4E-252 T 23-04-2016 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 374 565 8.1E-26 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 Gene3D G3DSA:2.40.37.10 459 589 2.1E-14 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 Gene3D G3DSA:2.40.37.10 339 363 2.1E-14 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 130 142 1.3E-15 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 546 559 1.3E-15 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 246 259 1.3E-15 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 107 125 1.3E-15 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 340 359 1.3E-15 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 12 637 42.355 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 282 297 - T 23-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 107 125 - T 23-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 SUPERFAMILY SSF51419 75 352 1.1E-66 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 SUPERFAMILY SSF50621 459 567 2.44E-6 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PANTHER PTHR11482:SF36 443 601 2.4E-252 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PANTHER PTHR11482:SF36 1 373 2.4E-252 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 PIRSF PIRSF001336 1 637 2.1E-250 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 TIGRFAM TIGR01273 speA: arginine decarboxylase 14 636 7.7E-269 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 LT40_RS13415 f4912a4136704750c48455b1e08cee51 637 Gene3D G3DSA:3.20.20.10 77 338 5.0E-59 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS11335 b3dc5c6f5d40abb06e3129d8be0893c8 389 Gene3D G3DSA:2.60.120.650 8 215 5.3E-42 T 23-04-2016 LT40_RS11335 b3dc5c6f5d40abb06e3129d8be0893c8 389 SUPERFAMILY SSF51197 6 295 1.65E-76 T 23-04-2016 LT40_RS11335 b3dc5c6f5d40abb06e3129d8be0893c8 389 PANTHER PTHR13096 9 365 1.6E-67 T 23-04-2016 LT40_RS11335 b3dc5c6f5d40abb06e3129d8be0893c8 389 Pfam PF08007 Cupin superfamily protein 16 318 8.0E-102 T 23-04-2016 IPR003347 JmjC domain LT40_RS11335 b3dc5c6f5d40abb06e3129d8be0893c8 389 SMART SM00558 101 229 6.5E-4 T 23-04-2016 IPR003347 JmjC domain LT40_RS06940 5b1052e9a9ea485ecaddd23f6ce491c9 215 Pfam PF00702 haloacid dehalogenase-like hydrolase 60 174 1.5E-6 T 23-04-2016 LT40_RS06940 5b1052e9a9ea485ecaddd23f6ce491c9 215 Gene3D G3DSA:3.40.50.1000 1 201 2.9E-22 T 23-04-2016 IPR023214 HAD-like domain LT40_RS06940 5b1052e9a9ea485ecaddd23f6ce491c9 215 SUPERFAMILY SSF56784 1 198 1.36E-21 T 23-04-2016 IPR023214 HAD-like domain LT40_RS18910 4c725d4389e0349868c34bd3488f3788 184 SUPERFAMILY SSF81901 35 135 4.32E-21 T 23-04-2016 LT40_RS18910 4c725d4389e0349868c34bd3488f3788 184 Gene3D G3DSA:1.25.40.10 43 136 7.1E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS18910 4c725d4389e0349868c34bd3488f3788 184 SMART SM00671 61 96 1.6E-9 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS18910 4c725d4389e0349868c34bd3488f3788 184 SMART SM00671 97 132 4.6E-6 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS18910 4c725d4389e0349868c34bd3488f3788 184 Pfam PF08238 Sel1 repeat 61 96 1.1E-7 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS18910 4c725d4389e0349868c34bd3488f3788 184 Pfam PF08238 Sel1 repeat 97 128 0.0011 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS18910 4c725d4389e0349868c34bd3488f3788 184 PANTHER PTHR11102:SF88 53 136 1.7E-17 T 23-04-2016 LT40_RS18910 4c725d4389e0349868c34bd3488f3788 184 PANTHER PTHR11102 53 136 1.7E-17 T 23-04-2016 LT40_RS14400 9cef85239e382d16b1e9e0261cc7c670 322 Gene3D G3DSA:3.40.190.100 116 253 3.1E-40 T 23-04-2016 LT40_RS14400 9cef85239e382d16b1e9e0261cc7c670 322 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 33 301 7.2E-60 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LT40_RS14400 9cef85239e382d16b1e9e0261cc7c670 322 Gene3D G3DSA:3.40.190.10 254 315 2.0E-15 T 23-04-2016 LT40_RS14400 9cef85239e382d16b1e9e0261cc7c670 322 Gene3D G3DSA:3.40.190.10 31 115 2.0E-15 T 23-04-2016 LT40_RS14400 9cef85239e382d16b1e9e0261cc7c670 322 SUPERFAMILY SSF53850 28 317 1.95E-67 T 23-04-2016 LT40_RS14400 9cef85239e382d16b1e9e0261cc7c670 322 PANTHER PTHR30177 7 305 3.4E-169 T 23-04-2016 LT40_RS14400 9cef85239e382d16b1e9e0261cc7c670 322 PANTHER PTHR30177:SF14 7 305 3.4E-169 T 23-04-2016 LT40_RS01635 3895166f032446ff39c7c5096ce0fa94 550 Gene3D G3DSA:3.40.50.980 198 334 5.8E-25 T 23-04-2016 LT40_RS01635 3895166f032446ff39c7c5096ce0fa94 550 Gene3D G3DSA:3.30.300.30 440 538 8.0E-30 T 23-04-2016 LT40_RS01635 3895166f032446ff39c7c5096ce0fa94 550 SUPERFAMILY SSF56801 12 537 1.44E-132 T 23-04-2016 LT40_RS01635 3895166f032446ff39c7c5096ce0fa94 550 Pfam PF00501 AMP-binding enzyme 27 443 1.1E-86 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LT40_RS01635 3895166f032446ff39c7c5096ce0fa94 550 Gene3D G3DSA:3.40.50.980 173 197 1.6E-30 T 23-04-2016 LT40_RS01635 3895166f032446ff39c7c5096ce0fa94 550 Gene3D G3DSA:3.40.50.980 24 133 1.6E-30 T 23-04-2016 LT40_RS01635 3895166f032446ff39c7c5096ce0fa94 550 PANTHER PTHR24095:SF169 7 537 1.3E-230 T 23-04-2016 LT40_RS01635 3895166f032446ff39c7c5096ce0fa94 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 188 199 - T 23-04-2016 IPR020845 AMP-binding, conserved site LT40_RS01635 3895166f032446ff39c7c5096ce0fa94 550 Gene3D G3DSA:2.30.38.10 369 437 1.9E-18 T 23-04-2016 LT40_RS01635 3895166f032446ff39c7c5096ce0fa94 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 527 1.2E-19 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LT40_RS01635 3895166f032446ff39c7c5096ce0fa94 550 PANTHER PTHR24095 7 537 1.3E-230 T 23-04-2016 LT40_RS04005 833af9a07f29aa798ecfab5d74f1cef1 300 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 25 296 1.1E-86 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS04005 833af9a07f29aa798ecfab5d74f1cef1 300 PANTHER PTHR21091:SF18 13 245 7.0E-82 T 23-04-2016 LT40_RS04005 833af9a07f29aa798ecfab5d74f1cef1 300 SUPERFAMILY SSF53790 23 243 6.54E-81 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS04005 833af9a07f29aa798ecfab5d74f1cef1 300 Gene3D G3DSA:3.30.950.10 132 245 1.4E-41 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 LT40_RS04005 833af9a07f29aa798ecfab5d74f1cef1 300 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 24 224 5.6E-28 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS04005 833af9a07f29aa798ecfab5d74f1cef1 300 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 24 245 36.146 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS04005 833af9a07f29aa798ecfab5d74f1cef1 300 Gene3D G3DSA:3.40.1010.10 23 131 8.3E-14 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LT40_RS04005 833af9a07f29aa798ecfab5d74f1cef1 300 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 102 113 - T 23-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS04005 833af9a07f29aa798ecfab5d74f1cef1 300 PANTHER PTHR21091 13 245 7.0E-82 T 23-04-2016 LT40_RS04005 833af9a07f29aa798ecfab5d74f1cef1 300 PIRSF PIRSF005917 13 300 1.7E-100 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 Gene3D G3DSA:3.40.190.10 195 262 9.7E-9 T 23-04-2016 LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 PANTHER PTHR30126:SF2 2 298 3.8E-136 T 23-04-2016 LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 2.3E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 Gene3D G3DSA:3.40.190.10 85 193 2.6E-8 T 23-04-2016 LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 Gene3D G3DSA:1.10.10.10 5 84 2.0E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 SUPERFAMILY SSF46785 5 89 1.7E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 PANTHER PTHR30126 2 298 3.8E-136 T 23-04-2016 LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 Pfam PF03466 LysR substrate binding domain 91 294 3.1E-27 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS16315 1683fc21eebb05a9efa073294f1d5981 302 SUPERFAMILY SSF53850 89 296 6.33E-23 T 23-04-2016 LT40_RS01550 9915dea9cf73763fcef5d2eaccf2e177 577 Gene3D G3DSA:3.40.50.300 243 345 9.8E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01550 9915dea9cf73763fcef5d2eaccf2e177 577 Gene3D G3DSA:3.40.50.300 470 552 9.8E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01550 9915dea9cf73763fcef5d2eaccf2e177 577 Pfam PF00580 UvrD/REP helicase N-terminal domain 27 93 1.5E-5 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LT40_RS01550 9915dea9cf73763fcef5d2eaccf2e177 577 Pfam PF00580 UvrD/REP helicase N-terminal domain 125 220 5.7E-8 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LT40_RS01550 9915dea9cf73763fcef5d2eaccf2e177 577 SUPERFAMILY SSF52540 14 553 1.87E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01550 9915dea9cf73763fcef5d2eaccf2e177 577 Gene3D G3DSA:3.40.50.300 12 115 4.7E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01550 9915dea9cf73763fcef5d2eaccf2e177 577 Gene3D G3DSA:3.40.50.300 152 242 4.7E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02310 8779923523f3cc9754d6aabd77ee85ac 435 SUPERFAMILY SSF117143 275 396 1.03E-72 T 23-04-2016 LT40_RS02310 8779923523f3cc9754d6aabd77ee85ac 435 SUPERFAMILY SSF117143 80 247 1.03E-72 T 23-04-2016 LT40_RS02310 8779923523f3cc9754d6aabd77ee85ac 435 Pfam PF00460 Flagella basal body rod protein 3 33 6.0E-10 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LT40_RS02310 8779923523f3cc9754d6aabd77ee85ac 435 Pfam PF07559 Flagellar basal body protein FlaE 176 316 6.1E-23 T 23-04-2016 IPR011491 Flagellar hook protein FlgE LT40_RS02310 8779923523f3cc9754d6aabd77ee85ac 435 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site LT40_RS02310 8779923523f3cc9754d6aabd77ee85ac 435 PANTHER PTHR30435 313 434 3.2E-84 T 23-04-2016 LT40_RS02310 8779923523f3cc9754d6aabd77ee85ac 435 PANTHER PTHR30435 1 124 3.2E-84 T 23-04-2016 LT40_RS02310 8779923523f3cc9754d6aabd77ee85ac 435 PANTHER PTHR30435:SF1 313 434 3.2E-84 T 23-04-2016 LT40_RS02310 8779923523f3cc9754d6aabd77ee85ac 435 PANTHER PTHR30435:SF1 1 124 3.2E-84 T 23-04-2016 LT40_RS02310 8779923523f3cc9754d6aabd77ee85ac 435 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 417 2.3E-94 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LT40_RS02310 8779923523f3cc9754d6aabd77ee85ac 435 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 370 434 4.4E-16 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LT40_RS02425 71ab29d058f2e6a7dc9d0e322399daa7 149 PIRSF PIRSF019404 3 148 2.8E-40 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LT40_RS02425 71ab29d058f2e6a7dc9d0e322399daa7 149 PANTHER PTHR38786 3 145 1.6E-35 T 23-04-2016 LT40_RS02425 71ab29d058f2e6a7dc9d0e322399daa7 149 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 7 145 7.6E-35 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 LT40_RS02425 71ab29d058f2e6a7dc9d0e322399daa7 149 Pfam PF02050 Flagellar FliJ protein 22 143 2.9E-35 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 LT40_RS02425 71ab29d058f2e6a7dc9d0e322399daa7 149 PRINTS PR01004 Flagellar FliJ protein signature 6 28 6.0E-7 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LT40_RS02425 71ab29d058f2e6a7dc9d0e322399daa7 149 PRINTS PR01004 Flagellar FliJ protein signature 128 148 6.0E-7 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LT40_RS02425 71ab29d058f2e6a7dc9d0e322399daa7 149 PRINTS PR01004 Flagellar FliJ protein signature 65 86 6.0E-7 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LT40_RS02425 71ab29d058f2e6a7dc9d0e322399daa7 149 PRINTS PR01004 Flagellar FliJ protein signature 46 63 6.0E-7 T 23-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 SMART SM00387 33 177 9.9E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 Pfam PF00204 DNA gyrase B 222 391 1.9E-56 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 SMART SM00433 37 798 2.9E-273 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 SUPERFAMILY SSF54211 222 393 1.14E-58 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 805 101.299 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 7.7E-76 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 7.7E-76 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR01159 DNA gyrase subunit B signature 221 243 7.7E-76 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 7.7E-76 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 7.7E-76 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR01159 DNA gyrase subunit B signature 197 210 7.7E-76 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR01159 DNA gyrase subunit B signature 182 197 7.7E-76 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 7.7E-76 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR01159 DNA gyrase subunit B signature 7 17 7.7E-76 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 7.7E-76 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PANTHER PTHR10169 725 804 0.0 T 23-04-2016 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PANTHER PTHR10169 4 554 0.0 T 23-04-2016 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 SUPERFAMILY SSF56719 395 561 8.89E-88 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 SUPERFAMILY SSF56719 731 795 8.89E-88 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 Gene3D G3DSA:3.30.230.10 221 393 5.4E-73 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 176 2.5E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 804 1.1E-301 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 794 7.3E-30 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 1.7E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 1.7E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 1.7E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 1.7E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 1.7E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR00418 DNA topoisomerase II family signature 115 129 1.7E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR00418 DNA topoisomerase II family signature 72 85 1.7E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR00418 DNA topoisomerase II family signature 37 52 1.7E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 1.7E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 Gene3D G3DSA:3.30.565.10 7 219 4.6E-91 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 Gene3D G3DSA:3.40.50.670 405 551 5.7E-101 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 Gene3D G3DSA:3.40.50.670 719 787 5.7E-101 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 Pfam PF01751 Toprim domain 420 531 1.6E-17 T 23-04-2016 IPR006171 Toprim domain LT40_RS16030 7e6f65be9e99632f136f177b4c3adc8d 805 SUPERFAMILY SSF55874 7 219 2.36E-74 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20350 67fbd9b3ae35d74d72690cd0ee270d59 179 Gene3D G3DSA:2.40.30.60 4 99 1.1E-30 T 23-04-2016 IPR002676 RimM protein GO:0006364 LT40_RS20350 67fbd9b3ae35d74d72690cd0ee270d59 179 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 11 178 1.7E-52 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 LT40_RS20350 67fbd9b3ae35d74d72690cd0ee270d59 179 Pfam PF01782 RimM N-terminal domain 13 95 8.1E-26 T 23-04-2016 IPR002676 RimM protein GO:0006364 LT40_RS20350 67fbd9b3ae35d74d72690cd0ee270d59 179 Gene3D G3DSA:2.30.30.240 105 179 2.0E-30 T 23-04-2016 LT40_RS20350 67fbd9b3ae35d74d72690cd0ee270d59 179 Pfam PF05239 PRC-barrel domain 103 174 7.9E-6 T 23-04-2016 IPR027275 PRC-barrel domain LT40_RS20350 67fbd9b3ae35d74d72690cd0ee270d59 179 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 11 179 24.07 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 LT40_RS20350 67fbd9b3ae35d74d72690cd0ee270d59 179 SUPERFAMILY SSF50447 10 99 2.93E-22 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain LT40_RS20350 67fbd9b3ae35d74d72690cd0ee270d59 179 SUPERFAMILY SSF50346 105 179 5.49E-21 T 23-04-2016 IPR011033 PRC-barrel-like LT40_RS20350 67fbd9b3ae35d74d72690cd0ee270d59 179 PANTHER PTHR33692 9 179 4.8E-50 T 23-04-2016 LT40_RS20350 67fbd9b3ae35d74d72690cd0ee270d59 179 PANTHER PTHR33692:SF1 9 179 4.8E-50 T 23-04-2016 LT40_RS17780 40a396a77eb201335935088e6d0e2a43 467 SUPERFAMILY SSF102588 180 261 1.01E-30 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain LT40_RS17780 40a396a77eb201335935088e6d0e2a43 467 SUPERFAMILY SSF102588 301 463 1.01E-30 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain LT40_RS17780 40a396a77eb201335935088e6d0e2a43 467 Pfam PF02585 GlcNAc-PI de-N-acetylase 182 350 2.1E-13 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related LT40_RS17780 40a396a77eb201335935088e6d0e2a43 467 PANTHER PTHR12993 308 395 8.0E-49 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related LT40_RS17780 40a396a77eb201335935088e6d0e2a43 467 PANTHER PTHR12993 134 279 8.0E-49 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related LT40_RS17780 40a396a77eb201335935088e6d0e2a43 467 PANTHER PTHR12993:SF10 308 395 8.0E-49 T 23-04-2016 LT40_RS17780 40a396a77eb201335935088e6d0e2a43 467 PANTHER PTHR12993:SF10 134 279 8.0E-49 T 23-04-2016 LT40_RS17780 40a396a77eb201335935088e6d0e2a43 467 Gene3D G3DSA:3.40.50.10320 306 395 1.5E-19 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain LT40_RS17780 40a396a77eb201335935088e6d0e2a43 467 Gene3D G3DSA:3.40.50.10320 179 266 1.5E-19 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain LT40_RS15665 8f62e348fb7d803678c2906a0c111202 539 SMART SM00052 275 519 1.9E-80 T 23-04-2016 IPR001633 EAL domain LT40_RS15665 8f62e348fb7d803678c2906a0c111202 539 Pfam PF12792 CSS motif domain associated with EAL 46 241 2.7E-21 T 23-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LT40_RS15665 8f62e348fb7d803678c2906a0c111202 539 Gene3D G3DSA:3.20.20.450 281 526 1.1E-79 T 23-04-2016 IPR001633 EAL domain LT40_RS15665 8f62e348fb7d803678c2906a0c111202 539 SUPERFAMILY SSF141868 282 526 8.63E-74 T 23-04-2016 IPR001633 EAL domain LT40_RS15665 8f62e348fb7d803678c2906a0c111202 539 PANTHER PTHR33121:SF16 251 520 5.6E-92 T 23-04-2016 LT40_RS15665 8f62e348fb7d803678c2906a0c111202 539 Pfam PF00563 EAL domain 282 513 5.6E-62 T 23-04-2016 IPR001633 EAL domain LT40_RS15665 8f62e348fb7d803678c2906a0c111202 539 PANTHER PTHR33121 251 520 5.6E-92 T 23-04-2016 LT40_RS11275 0dc667b7bfa97d5eff2805e2fc7b6e26 822 Gene3D G3DSA:3.40.50.300 409 714 1.9E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11275 0dc667b7bfa97d5eff2805e2fc7b6e26 822 PANTHER PTHR22683:SF41 197 817 5.8E-265 T 23-04-2016 LT40_RS11275 0dc667b7bfa97d5eff2805e2fc7b6e26 822 Pfam PF09397 Ftsk gamma domain 756 816 6.4E-26 T 23-04-2016 IPR018541 FtsK gamma domain LT40_RS11275 0dc667b7bfa97d5eff2805e2fc7b6e26 822 SUPERFAMILY SSF52540 407 720 1.73E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11275 0dc667b7bfa97d5eff2805e2fc7b6e26 822 SUPERFAMILY SSF46785 754 817 5.53E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11275 0dc667b7bfa97d5eff2805e2fc7b6e26 822 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 4 176 6.0E-40 T 23-04-2016 IPR025199 DNA translocase FtsK, 4TM region LT40_RS11275 0dc667b7bfa97d5eff2805e2fc7b6e26 822 SMART SM00843 754 819 4.2E-36 T 23-04-2016 IPR018541 FtsK gamma domain LT40_RS11275 0dc667b7bfa97d5eff2805e2fc7b6e26 822 PANTHER PTHR22683 197 817 5.8E-265 T 23-04-2016 LT40_RS11275 0dc667b7bfa97d5eff2805e2fc7b6e26 822 Pfam PF01580 FtsK/SpoIIIE family 437 647 4.5E-64 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 LT40_RS13670 edc3b821a3422f6e4e3a513b4f41954d 291 Pfam PF00005 ABC transporter 22 212 4.3E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS13670 edc3b821a3422f6e4e3a513b4f41954d 291 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 263 284 1.4E-10 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LT40_RS13670 edc3b821a3422f6e4e3a513b4f41954d 291 SMART SM00382 31 262 1.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS13670 edc3b821a3422f6e4e3a513b4f41954d 291 ProSitePatterns PS00211 ABC transporters family signature. 185 199 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS13670 edc3b821a3422f6e4e3a513b4f41954d 291 PANTHER PTHR24220:SF358 103 289 2.1E-112 T 23-04-2016 LT40_RS13670 edc3b821a3422f6e4e3a513b4f41954d 291 PANTHER PTHR24220:SF358 8 74 2.1E-112 T 23-04-2016 LT40_RS13670 edc3b821a3422f6e4e3a513b4f41954d 291 PANTHER PTHR24220 103 289 2.1E-112 T 23-04-2016 LT40_RS13670 edc3b821a3422f6e4e3a513b4f41954d 291 PANTHER PTHR24220 8 74 2.1E-112 T 23-04-2016 LT40_RS13670 edc3b821a3422f6e4e3a513b4f41954d 291 Gene3D G3DSA:3.40.50.300 2 283 1.4E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13670 edc3b821a3422f6e4e3a513b4f41954d 291 SUPERFAMILY SSF52540 3 67 1.28E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13670 edc3b821a3422f6e4e3a513b4f41954d 291 SUPERFAMILY SSF52540 100 284 1.28E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01350 90e79b08a5790c6e6530e5a65e726e13 277 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 79 8.7E-22 T 23-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal LT40_RS01350 90e79b08a5790c6e6530e5a65e726e13 277 SMART SM00460 153 215 7.2E-19 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS01350 90e79b08a5790c6e6530e5a65e726e13 277 Gene3D G3DSA:3.90.260.10 134 245 3.1E-13 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS01350 90e79b08a5790c6e6530e5a65e726e13 277 SUPERFAMILY SSF54001 51 259 5.79E-49 T 23-04-2016 LT40_RS01350 90e79b08a5790c6e6530e5a65e726e13 277 PANTHER PTHR33490 1 256 6.0E-113 T 23-04-2016 LT40_RS01350 90e79b08a5790c6e6530e5a65e726e13 277 Pfam PF01841 Transglutaminase-like superfamily 120 212 2.1E-23 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS01350 90e79b08a5790c6e6530e5a65e726e13 277 PANTHER PTHR33490:SF5 1 256 6.0E-113 T 23-04-2016 LT40_RS10975 614606cebd65d23377805548022b89db 306 PANTHER PTHR11732 34 294 1.5E-42 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS10975 614606cebd65d23377805548022b89db 306 Gene3D G3DSA:3.20.20.100 36 295 1.0E-45 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS10975 614606cebd65d23377805548022b89db 306 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 30 1.5E-4 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LT40_RS10975 614606cebd65d23377805548022b89db 306 Pfam PF00248 Aldo/keto reductase family 49 294 1.4E-32 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS10975 614606cebd65d23377805548022b89db 306 SUPERFAMILY SSF51430 36 295 3.01E-51 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS00985 de49e35ba572a9242b7248c3b64626d8 213 Pfam PF05036 Sporulation related domain 138 207 1.1E-15 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS00985 de49e35ba572a9242b7248c3b64626d8 213 PANTHER PTHR38687:SF1 5 213 1.8E-31 T 23-04-2016 LT40_RS00985 de49e35ba572a9242b7248c3b64626d8 213 SUPERFAMILY SSF110997 138 209 1.09E-16 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS00985 de49e35ba572a9242b7248c3b64626d8 213 PANTHER PTHR38687 5 213 1.8E-31 T 23-04-2016 LT40_RS00985 de49e35ba572a9242b7248c3b64626d8 213 Gene3D G3DSA:3.30.70.1070 137 210 1.5E-20 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS18105 d1215a2f48d913122705ee846833f84b 219 Pfam PF00483 Nucleotidyl transferase 2 117 1.0E-21 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LT40_RS18105 d1215a2f48d913122705ee846833f84b 219 Gene3D G3DSA:3.90.550.10 1 218 4.2E-52 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS18105 d1215a2f48d913122705ee846833f84b 219 SUPERFAMILY SSF53448 1 215 5.41E-52 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS18105 d1215a2f48d913122705ee846833f84b 219 PANTHER PTHR22572 2 218 1.9E-48 T 23-04-2016 LT40_RS18105 d1215a2f48d913122705ee846833f84b 219 PANTHER PTHR22572:SF15 2 218 1.9E-48 T 23-04-2016 LT40_RS07650 4441d7f9b352f090e09526ea225452ee 677 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 160 1.3E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS07650 4441d7f9b352f090e09526ea225452ee 677 PANTHER PTHR32552 47 677 7.3E-34 T 23-04-2016 LT40_RS07650 4441d7f9b352f090e09526ea225452ee 677 Pfam PF00593 TonB dependent receptor 429 675 2.8E-19 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS07650 4441d7f9b352f090e09526ea225452ee 677 SUPERFAMILY SSF56935 13 677 3.14E-88 T 23-04-2016 LT40_RS07650 4441d7f9b352f090e09526ea225452ee 677 Gene3D G3DSA:2.170.130.10 43 165 1.3E-24 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS07650 4441d7f9b352f090e09526ea225452ee 677 Gene3D G3DSA:2.40.170.20 166 676 7.1E-61 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 Pfam PF00012 Hsp70 protein 21 601 4.0E-181 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 PANTHER PTHR19375:SF176 19 571 9.1E-301 T 23-04-2016 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 617 5.0E-273 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 SUPERFAMILY SSF100920 383 535 2.35E-48 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 Gene3D G3DSA:2.60.34.10 388 528 2.5E-52 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 PANTHER PTHR19375 19 571 9.1E-301 T 23-04-2016 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 Gene3D G3DSA:3.30.420.40 19 87 1.3E-54 T 23-04-2016 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 Gene3D G3DSA:3.30.420.40 128 201 1.3E-54 T 23-04-2016 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 Gene3D G3DSA:3.30.420.40 202 238 1.3E-30 T 23-04-2016 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 Gene3D G3DSA:3.30.420.40 314 356 1.3E-30 T 23-04-2016 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 618 44.792 T 23-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 Gene3D G3DSA:3.90.640.10 239 310 9.0E-8 T 23-04-2016 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 SUPERFAMILY SSF100934 505 617 6.87E-32 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 105 119 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 PRINTS PR00301 70kDa heat shock protein signature 386 405 2.4E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.4E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.4E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 PRINTS PR00301 70kDa heat shock protein signature 467 483 2.4E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.4E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.4E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 PRINTS PR00301 70kDa heat shock protein signature 70 78 2.4E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.4E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.4E-56 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 SUPERFAMILY SSF53067 19 197 5.18E-51 T 23-04-2016 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 Gene3D G3DSA:1.20.1270.10 529 617 9.9E-27 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 SUPERFAMILY SSF53067 200 376 1.5E-50 T 23-04-2016 LT40_RS03510 0dbeebf6ecea364d47f0f440a019c0d9 620 Gene3D G3DSA:3.30.30.30 88 127 5.3E-6 T 23-04-2016 LT40_RS14360 cfe6bda4df3e88c113fe91221ee6e619 265 PANTHER PTHR18966:SF152 12 260 1.3E-77 T 23-04-2016 LT40_RS14360 cfe6bda4df3e88c113fe91221ee6e619 265 SMART SM00062 34 258 1.6E-54 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS14360 cfe6bda4df3e88c113fe91221ee6e619 265 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LT40_RS14360 cfe6bda4df3e88c113fe91221ee6e619 265 PANTHER PTHR18966 12 260 1.3E-77 T 23-04-2016 LT40_RS14360 cfe6bda4df3e88c113fe91221ee6e619 265 Gene3D G3DSA:3.40.190.10 31 111 1.6E-38 T 23-04-2016 LT40_RS14360 cfe6bda4df3e88c113fe91221ee6e619 265 Gene3D G3DSA:3.40.190.10 218 257 1.6E-38 T 23-04-2016 LT40_RS14360 cfe6bda4df3e88c113fe91221ee6e619 265 SUPERFAMILY SSF53850 6 257 2.12E-66 T 23-04-2016 LT40_RS14360 cfe6bda4df3e88c113fe91221ee6e619 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 256 3.4E-56 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS14360 cfe6bda4df3e88c113fe91221ee6e619 265 SMART SM00079 34 257 3.5E-5 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LT40_RS14360 cfe6bda4df3e88c113fe91221ee6e619 265 Gene3D G3DSA:3.40.190.10 112 217 1.4E-14 T 23-04-2016 LT40_RS04930 9b3d71faaa10b28bf30e3757665af81b 73 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 1.7E-21 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain LT40_RS04930 9b3d71faaa10b28bf30e3757665af81b 73 Pfam PF09723 Zinc ribbon domain 1 40 6.8E-16 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain LT40_RS04930 9b3d71faaa10b28bf30e3757665af81b 73 PANTHER PTHR34404:SF2 2 64 2.9E-19 T 23-04-2016 LT40_RS04930 9b3d71faaa10b28bf30e3757665af81b 73 SMART SM00834 1 42 1.4E-19 T 23-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain LT40_RS04930 9b3d71faaa10b28bf30e3757665af81b 73 PANTHER PTHR34404 2 64 2.9E-19 T 23-04-2016 LT40_RS01500 af28c5b1af30d8c85d9dc3fe7bf950c5 85 SUPERFAMILY SSF143800 1 81 1.65E-20 T 23-04-2016 LT40_RS01500 af28c5b1af30d8c85d9dc3fe7bf950c5 85 PANTHER PTHR33280 1 81 4.2E-35 T 23-04-2016 LT40_RS01500 af28c5b1af30d8c85d9dc3fe7bf950c5 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS01500 af28c5b1af30d8c85d9dc3fe7bf950c5 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 25.494 T 23-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS01500 af28c5b1af30d8c85d9dc3fe7bf950c5 85 Pfam PF01197 Ribosomal protein L31 1 79 2.8E-23 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS01500 af28c5b1af30d8c85d9dc3fe7bf950c5 85 PRINTS PR01249 Ribosomal protein L31 signature 60 78 9.2E-13 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS01500 af28c5b1af30d8c85d9dc3fe7bf950c5 85 PRINTS PR01249 Ribosomal protein L31 signature 45 60 9.2E-13 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS01500 af28c5b1af30d8c85d9dc3fe7bf950c5 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 9.2E-13 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS01500 af28c5b1af30d8c85d9dc3fe7bf950c5 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 1.4E-14 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS01500 af28c5b1af30d8c85d9dc3fe7bf950c5 85 PANTHER PTHR33280:SF3 1 81 4.2E-35 T 23-04-2016 LT40_RS13145 54cc14061242c8f26ed63715f9a3a7a4 528 Pfam PF00171 Aldehyde dehydrogenase family 21 466 7.8E-48 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS13145 54cc14061242c8f26ed63715f9a3a7a4 528 PANTHER PTHR11699:SF10 4 520 2.6E-167 T 23-04-2016 LT40_RS13145 54cc14061242c8f26ed63715f9a3a7a4 528 SUPERFAMILY SSF53720 21 519 4.58E-98 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS13145 54cc14061242c8f26ed63715f9a3a7a4 528 PANTHER PTHR11699 4 520 2.6E-167 T 23-04-2016 LT40_RS13145 54cc14061242c8f26ed63715f9a3a7a4 528 Gene3D G3DSA:3.40.605.10 7 265 1.6E-46 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS13145 54cc14061242c8f26ed63715f9a3a7a4 528 Gene3D G3DSA:3.40.309.10 267 455 7.5E-53 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 SUPERFAMILY SSF55021 261 334 3.32E-15 T 23-04-2016 LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 PANTHER PTHR24220 277 312 1.0E-159 T 23-04-2016 LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 PANTHER PTHR24220 3 248 1.0E-159 T 23-04-2016 LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 SMART SM00930 261 334 2.6E-22 T 23-04-2016 IPR018449 NIL domain LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 SUPERFAMILY SSF52540 1 241 2.21E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 SMART SM00382 30 219 2.3E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 PANTHER PTHR24220:SF455 3 248 1.0E-159 T 23-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 Pfam PF09383 NIL domain 263 333 9.5E-18 T 23-04-2016 IPR018449 NIL domain LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 Gene3D G3DSA:3.30.70.260 238 335 3.1E-25 T 23-04-2016 LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 Gene3D G3DSA:3.40.50.300 1 237 1.7E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 PANTHER PTHR24220:SF455 277 312 1.0E-159 T 23-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 LT40_RS15740 82733b4639ad897bc7e63a9a11d23d9b 335 Pfam PF00005 ABC transporter 24 170 2.0E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS06790 d8fd58ea3fcca979a0749d2692aba563 218 PANTHER PTHR13136 32 217 2.1E-60 T 23-04-2016 IPR026555 KAT8 regulatory NSL complex subunit 3/Testis-expressed sequence 30 protein LT40_RS06790 d8fd58ea3fcca979a0749d2692aba563 218 SUPERFAMILY SSF53474 14 217 1.27E-27 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS06790 d8fd58ea3fcca979a0749d2692aba563 218 PANTHER PTHR13136:SF4 32 217 2.1E-60 T 23-04-2016 LT40_RS06790 d8fd58ea3fcca979a0749d2692aba563 218 Gene3D G3DSA:3.40.50.1820 25 217 6.6E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 SUPERFAMILY SSF52540 121 205 6.39E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 SUPERFAMILY SSF52540 821 847 6.39E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 SUPERFAMILY SSF52540 333 506 6.39E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 SUPERFAMILY SSF52540 10 80 6.39E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 SUPERFAMILY SSF52540 540 790 6.39E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 SUPERFAMILY SSF52980 925 1216 2.95E-71 T 23-04-2016 IPR011335 Restriction endonuclease type II-like LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Pfam PF13361 UvrD-like helicase C-terminal domain 707 838 1.8E-13 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 10 1214 0.0 T 23-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 PANTHER PTHR11070:SF23 820 1210 0.0 T 23-04-2016 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 PANTHER PTHR11070:SF23 9 89 0.0 T 23-04-2016 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 PANTHER PTHR11070:SF23 121 218 0.0 T 23-04-2016 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 PANTHER PTHR11070:SF23 308 510 0.0 T 23-04-2016 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 PANTHER PTHR11070:SF23 535 798 0.0 T 23-04-2016 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Gene3D G3DSA:3.40.50.300 462 603 9.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Gene3D G3DSA:3.40.50.300 752 901 9.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Gene3D G3DSA:1.10.3170.10 158 357 4.3E-53 T 23-04-2016 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Gene3D G3DSA:1.10.486.10 607 751 3.2E-47 T 23-04-2016 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Gene3D G3DSA:3.90.320.10 917 1218 7.8E-84 T 23-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 PANTHER PTHR11070 820 1210 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 PANTHER PTHR11070 9 89 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 PANTHER PTHR11070 121 218 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 PANTHER PTHR11070 308 510 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 PANTHER PTHR11070 535 798 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Pfam PF12705 PD-(D/E)XK nuclease superfamily 988 1191 2.9E-5 T 23-04-2016 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Gene3D G3DSA:3.40.50.300 11 82 2.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Gene3D G3DSA:3.40.50.300 123 152 2.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Gene3D G3DSA:3.40.50.300 358 461 2.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Pfam PF00580 UvrD/REP helicase N-terminal domain 14 446 7.2E-58 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LT40_RS13195 935d39f489e96ce5b35e4d40cb6e880d 1231 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 5 1215 14.859 T 23-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 LT40_RS01730 51faeb4929bbcce69177e021bdd0cd63 385 SUPERFAMILY SSF51004 60 364 1.44E-46 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain LT40_RS01730 51faeb4929bbcce69177e021bdd0cd63 385 PANTHER PTHR30344 4 383 2.2E-105 T 23-04-2016 LT40_RS01730 51faeb4929bbcce69177e021bdd0cd63 385 PANTHER PTHR30344:SF1 4 383 2.2E-105 T 23-04-2016 LT40_RS01730 51faeb4929bbcce69177e021bdd0cd63 385 Gene3D G3DSA:2.130.10.10 25 383 9.3E-93 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LT40_RS01730 51faeb4929bbcce69177e021bdd0cd63 385 Pfam PF10282 Lactonase, 7-bladed beta-propeller 28 382 6.8E-107 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 PANTHER PTHR30363:SF1 1 251 8.1E-107 T 23-04-2016 LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 9.9E-21 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 Gene3D G3DSA:1.10.10.10 1 57 4.1E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 SMART SM01134 72 232 2.6E-70 T 23-04-2016 LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 Pfam PF00455 DeoR C terminal sensor domain 75 231 1.4E-51 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 SUPERFAMILY SSF100950 74 231 1.13E-29 T 23-04-2016 LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.7E-11 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.7E-11 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 Gene3D G3DSA:3.30.750.70 71 147 2.0E-13 T 23-04-2016 LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 PANTHER PTHR30363 1 251 8.1E-107 T 23-04-2016 LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 SMART SM00420 6 58 4.0E-22 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LT40_RS05540 cf317f8a75f5384d83f2ab1592ec4f6e 251 SUPERFAMILY SSF46785 3 67 9.24E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13575 699912090652846210d3b6809889c34b 172 PANTHER PTHR23091 1 167 4.5E-93 T 23-04-2016 LT40_RS13575 699912090652846210d3b6809889c34b 172 PANTHER PTHR23091:SF187 1 167 4.5E-93 T 23-04-2016 LT40_RS13575 699912090652846210d3b6809889c34b 172 Gene3D G3DSA:3.40.630.30 1 168 2.3E-44 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS13575 699912090652846210d3b6809889c34b 172 SUPERFAMILY SSF55729 1 162 4.56E-36 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS13575 699912090652846210d3b6809889c34b 172 Pfam PF13420 Acetyltransferase (GNAT) domain 2 153 8.4E-23 T 23-04-2016 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 Gene3D G3DSA:3.40.1060.10 523 685 3.9E-83 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 PANTHER PTHR11670:SF39 305 861 0.0 T 23-04-2016 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 SUPERFAMILY SSF74778 2 160 2.09E-67 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 Gene3D G3DSA:3.30.499.10 405 522 1.3E-63 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 Pfam PF11791 Aconitate B N-terminal domain 4 156 6.8E-65 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 Gene3D G3DSA:3.20.19.10 163 360 9.1E-90 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 PIRSF PIRSF036687 1 862 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 PANTHER PTHR11670 305 861 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 857 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 Gene3D G3DSA:3.30.499.10 687 867 2.2E-53 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 382 5.3E-93 T 23-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 SUPERFAMILY SSF52016 163 372 1.47E-67 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 Pfam PF00330 Aconitase family (aconitate hydratase) 475 821 5.9E-42 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS06030 2d600992da66741150a4dbbdf56f2498 869 SUPERFAMILY SSF53732 379 858 6.41E-148 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS07120 558c15d74dac550bc26cfc68fb5ae546 341 Gene3D G3DSA:3.40.190.10 273 339 6.0E-43 T 23-04-2016 LT40_RS07120 558c15d74dac550bc26cfc68fb5ae546 341 Gene3D G3DSA:3.40.190.10 33 122 6.0E-43 T 23-04-2016 LT40_RS07120 558c15d74dac550bc26cfc68fb5ae546 341 SUPERFAMILY SSF53850 35 338 7.06E-85 T 23-04-2016 LT40_RS07120 558c15d74dac550bc26cfc68fb5ae546 341 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 40 322 2.4E-56 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LT40_RS07120 558c15d74dac550bc26cfc68fb5ae546 341 Gene3D G3DSA:3.40.190.100 125 272 1.4E-46 T 23-04-2016 LT40_RS00580 1a93d9f9b6e883539e6a0b91481aa495 166 Gene3D G3DSA:3.90.950.20 3 158 2.1E-52 T 23-04-2016 IPR008136 CinA, C-terminal LT40_RS00580 1a93d9f9b6e883539e6a0b91481aa495 166 PANTHER PTHR13939 6 166 1.1E-67 T 23-04-2016 LT40_RS00580 1a93d9f9b6e883539e6a0b91481aa495 166 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 11 154 8.2E-45 T 23-04-2016 IPR008136 CinA, C-terminal LT40_RS00580 1a93d9f9b6e883539e6a0b91481aa495 166 Pfam PF02464 Competence-damaged protein 5 156 2.2E-53 T 23-04-2016 IPR008136 CinA, C-terminal LT40_RS00580 1a93d9f9b6e883539e6a0b91481aa495 166 SUPERFAMILY SSF142433 5 157 1.24E-50 T 23-04-2016 IPR008136 CinA, C-terminal LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 Gene3D G3DSA:3.50.50.60 209 330 3.7E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PANTHER PTHR22912:SF107 198 512 2.7E-205 T 23-04-2016 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 SUPERFAMILY SSF52833 104 195 1.36E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 502 1.4E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 343 363 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PIRSF PIRSF000238 1 519 3.8E-264 T 23-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 Gene3D G3DSA:3.50.50.60 331 440 2.0E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 SUPERFAMILY SSF52833 1 100 1.9E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 313 331 1.7E-40 T 23-04-2016 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 440 456 1.7E-40 T 23-04-2016 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 1.7E-40 T 23-04-2016 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 373 1.7E-40 T 23-04-2016 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 466 488 1.7E-40 T 23-04-2016 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 Gene3D G3DSA:3.50.50.60 441 514 3.1E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 Pfam PF13192 Thioredoxin domain 124 194 1.8E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 1.2E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 1.2E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 314 322 1.2E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 476 494 1.2E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 1.2E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 403 419 1.2E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 336 348 1.2E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 351 375 1.2E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 442 463 1.2E-65 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 515 4.5E-242 T 23-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 Gene3D G3DSA:3.40.30.10 1 93 4.5E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 Gene3D G3DSA:3.40.30.10 103 196 3.8E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 PANTHER PTHR22912 198 512 2.7E-205 T 23-04-2016 LT40_RS09395 9de1b753975a4e3e1f9dcb481ec4ad38 520 SUPERFAMILY SSF51905 201 512 1.44E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Pfam PF01627 Hpt domain 1102 1178 1.4E-6 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Pfam PF00512 His Kinase A (phospho-acceptor) domain 704 770 3.9E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 265 2.4E-18 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 294 510 2.6E-33 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SMART SM00387 817 931 9.5E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SMART SM00091 568 636 0.0015 T 23-04-2016 IPR000014 PAS domain LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Gene3D G3DSA:3.40.190.10 474 511 6.3E-18 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Gene3D G3DSA:3.40.190.10 47 136 1.5E-14 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Gene3D G3DSA:3.40.190.10 229 266 1.5E-14 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Gene3D G3DSA:3.40.190.10 292 370 6.3E-18 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Gene3D G3DSA:3.30.450.20 555 682 9.7E-14 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Gene3D G3DSA:3.40.190.10 371 465 7.6E-12 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Pfam PF08448 PAS fold 575 686 4.6E-8 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 PRINTS PR00344 Bacterial sensor protein C-terminal signature 857 871 6.8E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 PRINTS PR00344 Bacterial sensor protein C-terminal signature 891 909 6.8E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SMART SM00388 704 770 1.3E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SMART SM00448 951 1067 1.1E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SUPERFAMILY SSF55785 553 682 7.33E-16 T 23-04-2016 IPR000014 PAS domain LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Gene3D G3DSA:3.40.50.2300 950 1066 5.8E-31 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Gene3D G3DSA:1.20.120.160 1079 1166 3.0E-13 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Pfam PF00072 Response regulator receiver domain 953 1065 3.6E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Gene3D G3DSA:3.30.565.10 771 927 2.9E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SUPERFAMILY SSF53850 50 265 5.69E-30 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SUPERFAMILY SSF53850 286 513 7.87E-42 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 PANTHER PTHR24423 566 1109 2.3E-151 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 PANTHER PTHR24423 29 41 2.3E-151 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 PANTHER PTHR24423:SF382 566 1109 2.3E-151 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 PANTHER PTHR24423:SF382 29 41 2.3E-151 T 23-04-2016 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SMART SM00062 293 514 4.7E-26 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SMART SM00062 49 269 1.2E-22 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SUPERFAMILY SSF47226 1050 1164 1.03E-17 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Gene3D G3DSA:1.10.287.130 696 766 1.1E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SUPERFAMILY SSF47384 687 771 9.81E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 818 927 1.6E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 567 689 9.1E-7 T 23-04-2016 IPR000014 PAS domain LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SUPERFAMILY SSF52172 950 1067 8.11E-31 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10840 bd1ad89010368a84bee95432caaf1e05 1195 SUPERFAMILY SSF55874 760 927 2.88E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS11720 8ade13dbf96a7937294be5714475b93d 287 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 97 8.0E-19 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS11720 8ade13dbf96a7937294be5714475b93d 287 SUPERFAMILY SSF53223 4 107 5.76E-22 T 23-04-2016 LT40_RS11720 8ade13dbf96a7937294be5714475b93d 287 PANTHER PTHR21089 1 287 3.4E-69 T 23-04-2016 LT40_RS11720 8ade13dbf96a7937294be5714475b93d 287 PANTHER PTHR21089:SF6 1 287 3.4E-69 T 23-04-2016 LT40_RS11720 8ade13dbf96a7937294be5714475b93d 287 Gene3D G3DSA:3.40.192.10 4 115 9.4E-28 T 23-04-2016 LT40_RS11720 8ade13dbf96a7937294be5714475b93d 287 SUPERFAMILY SSF51735 111 259 1.47E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11720 8ade13dbf96a7937294be5714475b93d 287 Gene3D G3DSA:3.40.50.720 116 246 4.7E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04815 71414cde6daa3670ca41c3595aff6b24 309 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 296 4.5E-82 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LT40_RS04815 71414cde6daa3670ca41c3595aff6b24 309 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 4 306 3.9E-127 T 23-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 LT40_RS04815 71414cde6daa3670ca41c3595aff6b24 309 PANTHER PTHR30606 1 309 2.2E-159 T 23-04-2016 LT40_RS04815 71414cde6daa3670ca41c3595aff6b24 309 PIRSF PIRSF026649 1 306 1.6E-96 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LT40_RS04815 71414cde6daa3670ca41c3595aff6b24 309 PANTHER PTHR30606:SF5 1 309 2.2E-159 T 23-04-2016 LT40_RS04815 71414cde6daa3670ca41c3595aff6b24 309 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 3 306 47.515 T 23-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 LT40_RS03080 f2f6a4118996b427f774aa07051a90e1 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 359 1.9E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03080 f2f6a4118996b427f774aa07051a90e1 365 SUPERFAMILY SSF161098 155 345 3.53E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03080 f2f6a4118996b427f774aa07051a90e1 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 5.6E-20 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS03080 f2f6a4118996b427f774aa07051a90e1 365 PANTHER PTHR30085:SF3 63 365 6.4E-160 T 23-04-2016 LT40_RS03080 f2f6a4118996b427f774aa07051a90e1 365 PANTHER PTHR30085 63 365 6.4E-160 T 23-04-2016 LT40_RS03080 f2f6a4118996b427f774aa07051a90e1 365 Gene3D G3DSA:1.10.3720.10 155 360 9.2E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16575 cd2c834b7bb3614d3073d868f84214ea 479 SUPERFAMILY SSF46785 1 70 2.59E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16575 cd2c834b7bb3614d3073d868f84214ea 479 Gene3D G3DSA:1.10.10.10 1 66 4.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16575 cd2c834b7bb3614d3073d868f84214ea 479 SMART SM00345 7 66 1.1E-22 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS16575 cd2c834b7bb3614d3073d868f84214ea 479 PANTHER PTHR11751:SF275 81 462 2.6E-193 T 23-04-2016 LT40_RS16575 cd2c834b7bb3614d3073d868f84214ea 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.2E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS16575 cd2c834b7bb3614d3073d868f84214ea 479 SUPERFAMILY SSF53383 87 467 1.22E-96 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS16575 cd2c834b7bb3614d3073d868f84214ea 479 Gene3D G3DSA:3.40.640.10 139 351 3.6E-65 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS16575 cd2c834b7bb3614d3073d868f84214ea 479 PANTHER PTHR11751 81 462 2.6E-193 T 23-04-2016 LT40_RS16575 cd2c834b7bb3614d3073d868f84214ea 479 Gene3D G3DSA:3.90.1150.10 352 466 4.3E-11 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS16575 cd2c834b7bb3614d3073d868f84214ea 479 Pfam PF00155 Aminotransferase class I and II 105 460 3.6E-34 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 376 400 - T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 35 543 2.7E-175 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 Pfam PF01019 Gamma-glutamyltranspeptidase 50 568 6.3E-184 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 PANTHER PTHR11686:SF9 26 575 3.2E-207 T 23-04-2016 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 130 148 5.7E-79 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 376 394 5.7E-79 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 400 418 5.7E-79 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 465 482 5.7E-79 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 441 456 5.7E-79 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 57 82 5.7E-79 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 277 296 5.7E-79 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 167 5.7E-79 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 247 263 5.7E-79 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 PANTHER PTHR11686 26 575 3.2E-207 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS11175 8dfed09db9882a0704a29e2c4d925453 575 SUPERFAMILY SSF56235 28 575 5.02E-180 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS12305 f26e5bcfec78b9018bddd992cec4bd6f 307 Pfam PF01522 Polysaccharide deacetylase 76 169 2.0E-16 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LT40_RS12305 f26e5bcfec78b9018bddd992cec4bd6f 307 Gene3D G3DSA:3.20.20.370 4 301 2.2E-115 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LT40_RS12305 f26e5bcfec78b9018bddd992cec4bd6f 307 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 5 300 5.7E-163 T 23-04-2016 IPR017625 Putative urate catabolism protein LT40_RS12305 f26e5bcfec78b9018bddd992cec4bd6f 307 PANTHER PTHR10587:SF72 10 299 7.2E-169 T 23-04-2016 LT40_RS12305 f26e5bcfec78b9018bddd992cec4bd6f 307 PANTHER PTHR10587 10 299 7.2E-169 T 23-04-2016 LT40_RS12305 f26e5bcfec78b9018bddd992cec4bd6f 307 SUPERFAMILY SSF88713 4 301 2.09E-96 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LT40_RS16250 5a554b3d5570664e72c9ab614181896c 727 Gene3D G3DSA:3.40.50.300 193 287 5.8E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16250 5a554b3d5570664e72c9ab614181896c 727 Gene3D G3DSA:3.40.50.300 8 112 5.8E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16250 5a554b3d5570664e72c9ab614181896c 727 PANTHER PTHR11070 8 725 6.5E-242 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LT40_RS16250 5a554b3d5570664e72c9ab614181896c 727 Pfam PF13361 UvrD-like helicase C-terminal domain 279 618 2.9E-75 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LT40_RS16250 5a554b3d5570664e72c9ab614181896c 727 Gene3D G3DSA:3.40.50.300 288 389 7.0E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16250 5a554b3d5570664e72c9ab614181896c 727 Gene3D G3DSA:3.40.50.300 554 644 7.0E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16250 5a554b3d5570664e72c9ab614181896c 727 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 273 2.0E-74 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LT40_RS16250 5a554b3d5570664e72c9ab614181896c 727 Gene3D G3DSA:1.10.10.160 116 192 2.6E-22 T 23-04-2016 IPR013986 DExx box DNA helicase domain LT40_RS16250 5a554b3d5570664e72c9ab614181896c 727 Gene3D G3DSA:1.10.486.10 390 543 1.9E-47 T 23-04-2016 LT40_RS16250 5a554b3d5570664e72c9ab614181896c 727 PANTHER PTHR11070:SF7 8 725 6.5E-242 T 23-04-2016 LT40_RS16250 5a554b3d5570664e72c9ab614181896c 727 SUPERFAMILY SSF52540 9 644 9.52E-183 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12935 02733228f46e3716da51a4f166eeda42 214 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 30.377 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 LT40_RS12935 02733228f46e3716da51a4f166eeda42 214 PANTHER PTHR10920:SF20 2 206 2.2E-124 T 23-04-2016 LT40_RS12935 02733228f46e3716da51a4f166eeda42 214 Pfam PF01728 FtsJ-like methyltransferase 28 204 4.1E-55 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 LT40_RS12935 02733228f46e3716da51a4f166eeda42 214 Gene3D G3DSA:3.40.50.150 3 207 4.1E-71 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS12935 02733228f46e3716da51a4f166eeda42 214 SUPERFAMILY SSF53335 27 206 9.51E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS12935 02733228f46e3716da51a4f166eeda42 214 PANTHER PTHR10920 2 206 2.2E-124 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 LT40_RS12935 02733228f46e3716da51a4f166eeda42 214 PIRSF PIRSF005461 1 213 1.7E-79 T 23-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 Pfam PF03705 CheR methyltransferase, all-alpha domain 5 52 1.1E-5 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 PRINTS PR00996 Glutamate methyltransferase family signature 60 72 2.2E-18 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 PRINTS PR00996 Glutamate methyltransferase family signature 219 242 2.2E-18 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 PRINTS PR00996 Glutamate methyltransferase family signature 200 214 2.2E-18 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 PRINTS PR00996 Glutamate methyltransferase family signature 98 118 2.2E-18 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 PRINTS PR00996 Glutamate methyltransferase family signature 131 147 2.2E-18 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 SUPERFAMILY SSF53335 67 253 1.39E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 SMART SM00138 1 260 9.3E-38 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 SUPERFAMILY SSF47757 5 64 6.93E-6 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 PANTHER PTHR24422 5 420 1.1E-80 T 23-04-2016 LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 PANTHER PTHR24422:SF14 5 420 1.1E-80 T 23-04-2016 LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 Gene3D G3DSA:1.25.40.10 319 414 3.2E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 Gene3D G3DSA:3.40.50.150 67 252 1.3E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 Pfam PF01739 CheR methyltransferase, SAM binding domain 68 240 1.6E-33 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 Gene3D G3DSA:1.10.155.10 5 64 1.2E-5 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LT40_RS20445 1cefa9ce383272ae372c42c220a09381 424 SUPERFAMILY SSF48452 327 415 2.98E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS04535 bf3f7b881fe158c7a3abd5b2a6e7806b 74 Pfam PF14375 Cysteine-rich CWC 12 64 7.6E-14 T 23-04-2016 IPR032720 Cysteine-rich CWC LT40_RS15675 706d455e101781e74709b6641e7c2f00 659 SMART SM00267 488 658 1.2E-63 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15675 706d455e101781e74709b6641e7c2f00 659 PANTHER PTHR10799 15 139 2.2E-27 T 23-04-2016 LT40_RS15675 706d455e101781e74709b6641e7c2f00 659 PANTHER PTHR10799 531 655 2.2E-27 T 23-04-2016 LT40_RS15675 706d455e101781e74709b6641e7c2f00 659 Pfam PF00990 Diguanylate cyclase, GGDEF domain 498 654 2.2E-47 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15675 706d455e101781e74709b6641e7c2f00 659 Gene3D G3DSA:3.30.70.270 501 656 9.0E-57 T 23-04-2016 LT40_RS15675 706d455e101781e74709b6641e7c2f00 659 SUPERFAMILY SSF55073 503 656 1.33E-50 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS15675 706d455e101781e74709b6641e7c2f00 659 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 496 656 3.2E-50 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15675 706d455e101781e74709b6641e7c2f00 659 PANTHER PTHR10799:SF750 15 139 2.2E-27 T 23-04-2016 LT40_RS15675 706d455e101781e74709b6641e7c2f00 659 PANTHER PTHR10799:SF750 531 655 2.2E-27 T 23-04-2016 LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 415 436 - T 23-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 PANTHER PTHR32303 589 805 1.2E-135 T 23-04-2016 LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 PANTHER PTHR32303 285 519 1.2E-135 T 23-04-2016 LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 PANTHER PTHR32303 132 265 1.2E-135 T 23-04-2016 LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 Gene3D G3DSA:2.140.10.10 164 545 8.4E-139 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 Gene3D G3DSA:2.140.10.10 581 806 8.4E-139 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 Pfam PF01011 PQQ enzyme repeat 732 769 1.2E-5 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 PANTHER PTHR32303:SF4 589 805 1.2E-135 T 23-04-2016 LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 PANTHER PTHR32303:SF4 285 519 1.2E-135 T 23-04-2016 LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 PANTHER PTHR32303:SF4 132 265 1.2E-135 T 23-04-2016 LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 SUPERFAMILY SSF50998 570 790 9.03E-142 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 SUPERFAMILY SSF50998 164 533 9.03E-142 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 19 804 0.0 T 23-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 Pfam PF13360 PQQ-like domain 221 518 1.1E-7 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 SMART SM00564 419 469 140.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 SMART SM00564 726 759 8.4E-4 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 SMART SM00564 651 698 350.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 SMART SM00564 350 391 69.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 SMART SM00564 222 253 0.023 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS01690 1079f4bbdf4ac2f3d2ed9f19b09549a0 807 SMART SM00564 492 524 72.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS15170 19cac2b5be174afe1883424ae18b7e68 306 SUPERFAMILY SSF161098 35 296 1.68E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15170 19cac2b5be174afe1883424ae18b7e68 306 PANTHER PTHR30193:SF8 9 306 1.6E-113 T 23-04-2016 LT40_RS15170 19cac2b5be174afe1883424ae18b7e68 306 Gene3D G3DSA:1.10.3720.10 28 294 5.2E-54 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15170 19cac2b5be174afe1883424ae18b7e68 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 291 5.4E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15170 19cac2b5be174afe1883424ae18b7e68 306 PANTHER PTHR30193 9 306 1.6E-113 T 23-04-2016 LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 Gene3D G3DSA:3.90.1260.10 160 359 3.4E-96 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 PANTHER PTHR11587:SF2 1 403 6.9E-236 T 23-04-2016 LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 SUPERFAMILY SSF52402 5 209 4.63E-51 T 23-04-2016 LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 Gene3D G3DSA:1.20.5.470 369 395 3.6E-6 T 23-04-2016 LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 Pfam PF00764 Arginosuccinate synthase 8 397 5.1E-154 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 402 52.347 T 23-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 Gene3D G3DSA:3.40.50.620 5 159 1.4E-67 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 SUPERFAMILY SSF69864 175 402 1.23E-93 T 23-04-2016 LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 399 1.4E-141 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS05360 c9dc32c5d34805ca48d19f077dac4567 405 PANTHER PTHR11587 1 403 6.9E-236 T 23-04-2016 LT40_RS01085 9aa94d11b48184992d95bcbdac243683 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 1.2E-151 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LT40_RS01085 9aa94d11b48184992d95bcbdac243683 406 Pfam PF00202 Aminotransferase class-III 22 400 4.9E-121 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS01085 9aa94d11b48184992d95bcbdac243683 406 PANTHER PTHR11986 1 406 7.0E-219 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS01085 9aa94d11b48184992d95bcbdac243683 406 SUPERFAMILY SSF53383 17 400 9.55E-125 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS01085 9aa94d11b48184992d95bcbdac243683 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 403 5.7E-217 T 23-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 LT40_RS01085 9aa94d11b48184992d95bcbdac243683 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS01085 9aa94d11b48184992d95bcbdac243683 406 Gene3D G3DSA:3.40.640.10 61 303 5.4E-87 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS01085 9aa94d11b48184992d95bcbdac243683 406 PANTHER PTHR11986:SF71 1 406 7.0E-219 T 23-04-2016 LT40_RS01085 9aa94d11b48184992d95bcbdac243683 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.318 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 LT40_RS01085 9aa94d11b48184992d95bcbdac243683 406 Gene3D G3DSA:3.90.1150.10 307 401 1.1E-35 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS01085 9aa94d11b48184992d95bcbdac243683 406 Gene3D G3DSA:3.90.1150.10 14 60 1.1E-35 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 Gene3D G3DSA:3.40.50.10490 297 510 5.4E-131 T 23-04-2016 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 Gene3D G3DSA:3.40.50.10490 12 101 5.4E-131 T 23-04-2016 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 Gene3D G3DSA:3.40.50.10490 102 294 4.0E-75 T 23-04-2016 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 501 518 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 SUPERFAMILY SSF53697 9 551 1.31E-208 T 23-04-2016 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 265 283 9.3E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 469 487 9.3E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 487 501 9.3E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 153 172 9.3E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 342 363 9.3E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 PRINTS PR00662 Glucose-6-phosphate isomerase signature 501 514 9.3E-52 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 PANTHER PTHR11469 2 549 3.6E-274 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 49 528 40.584 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 Pfam PF00342 Phosphoglucose isomerase 55 545 4.6E-193 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 269 282 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS12840 35759add155564848b8f87f9c49018dd 554 Gene3D G3DSA:1.10.1390.10 511 551 6.3E-17 T 23-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 LT40_RS16420 5aa741d1f62998e1b3615f6ad2081f08 55 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 23-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 LT40_RS16420 5aa741d1f62998e1b3615f6ad2081f08 55 PRINTS PR00163 Rubredoxin signature 33 49 6.9E-9 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 LT40_RS16420 5aa741d1f62998e1b3615f6ad2081f08 55 PRINTS PR00163 Rubredoxin signature 3 19 6.9E-9 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 LT40_RS16420 5aa741d1f62998e1b3615f6ad2081f08 55 SUPERFAMILY SSF57802 1 53 5.72E-22 T 23-04-2016 LT40_RS16420 5aa741d1f62998e1b3615f6ad2081f08 55 Gene3D G3DSA:2.20.28.10 1 53 1.8E-26 T 23-04-2016 IPR004039 Rubredoxin-type fold LT40_RS16420 5aa741d1f62998e1b3615f6ad2081f08 55 PIRSF PIRSF000071 1 55 1.6E-23 T 23-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 LT40_RS16420 5aa741d1f62998e1b3615f6ad2081f08 55 Pfam PF00301 Rubredoxin 3 49 2.6E-22 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 149 237 7.2E-39 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 269 385 6.9E-43 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 PIRSF PIRSF006205 4 396 7.6E-149 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 SUPERFAMILY SSF55347 129 272 1.8E-61 T 23-04-2016 LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 7 390 46.278 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 PANTHER PTHR30525 2 394 2.9E-219 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 SUPERFAMILY SSF69055 300 393 2.22E-31 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 SUPERFAMILY SSF51735 5 153 2.82E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 Gene3D G3DSA:1.10.1740.10 311 393 1.8E-30 T 23-04-2016 LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 389 5.6E-155 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 Gene3D G3DSA:3.40.50.720 3 153 2.1E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS00440 ce9fc5fc98d5f5c88c2cab9f682f4b7c 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 135 4.6E-43 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS20850 b1f8e1691d14ba0f6bddde4b2d766482 122 PANTHER PTHR11961 20 119 2.6E-20 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 LT40_RS20850 b1f8e1691d14ba0f6bddde4b2d766482 122 SUPERFAMILY SSF46626 20 121 1.05E-29 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS20850 b1f8e1691d14ba0f6bddde4b2d766482 122 Gene3D G3DSA:1.10.760.10 20 120 1.3E-32 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS20850 b1f8e1691d14ba0f6bddde4b2d766482 122 Pfam PF00034 Cytochrome c 24 120 5.1E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS20850 b1f8e1691d14ba0f6bddde4b2d766482 122 PRINTS PR00604 Class IA and IB cytochrome C signature 62 72 6.7E-14 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 LT40_RS20850 b1f8e1691d14ba0f6bddde4b2d766482 122 PRINTS PR00604 Class IA and IB cytochrome C signature 112 120 6.7E-14 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 LT40_RS20850 b1f8e1691d14ba0f6bddde4b2d766482 122 PRINTS PR00604 Class IA and IB cytochrome C signature 95 105 6.7E-14 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 LT40_RS20850 b1f8e1691d14ba0f6bddde4b2d766482 122 PRINTS PR00604 Class IA and IB cytochrome C signature 33 40 6.7E-14 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 LT40_RS20850 b1f8e1691d14ba0f6bddde4b2d766482 122 PRINTS PR00604 Class IA and IB cytochrome C signature 76 92 6.7E-14 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 LT40_RS20850 b1f8e1691d14ba0f6bddde4b2d766482 122 PRINTS PR00604 Class IA and IB cytochrome C signature 46 61 6.7E-14 T 23-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 LT40_RS20850 b1f8e1691d14ba0f6bddde4b2d766482 122 PANTHER PTHR11961:SF5 20 119 2.6E-20 T 23-04-2016 LT40_RS02510 ef7ba258576759b793e4a64d743619d8 128 SMART SM00448 5 119 2.4E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02510 ef7ba258576759b793e4a64d743619d8 128 Gene3D G3DSA:3.40.50.2300 3 125 5.0E-39 T 23-04-2016 LT40_RS02510 ef7ba258576759b793e4a64d743619d8 128 Pfam PF00072 Response regulator receiver domain 7 120 9.8E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02510 ef7ba258576759b793e4a64d743619d8 128 SUPERFAMILY SSF52172 3 125 4.13E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS02510 ef7ba258576759b793e4a64d743619d8 128 PANTHER PTHR26402 5 125 4.2E-43 T 23-04-2016 LT40_RS08260 b533350267bf3d5d60f42985c4c891b2 205 PANTHER PTHR30055:SF60 7 205 1.3E-56 T 23-04-2016 LT40_RS08260 b533350267bf3d5d60f42985c4c891b2 205 SUPERFAMILY SSF46689 10 94 2.72E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08260 b533350267bf3d5d60f42985c4c891b2 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 2.3E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS08260 b533350267bf3d5d60f42985c4c891b2 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 2.3E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS08260 b533350267bf3d5d60f42985c4c891b2 205 SUPERFAMILY SSF48498 89 205 1.15E-9 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LT40_RS08260 b533350267bf3d5d60f42985c4c891b2 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 64 1.5E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS08260 b533350267bf3d5d60f42985c4c891b2 205 Gene3D G3DSA:1.10.357.10 18 204 9.8E-31 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS08260 b533350267bf3d5d60f42985c4c891b2 205 PANTHER PTHR30055 7 205 1.3E-56 T 23-04-2016 LT40_RS07815 a1b87e36f29a3c9ac7fedee87c77e8b7 431 Pfam PF00263 Bacterial type II and III secretion system protein 230 391 2.7E-46 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 LT40_RS07815 a1b87e36f29a3c9ac7fedee87c77e8b7 431 PANTHER PTHR30332 150 403 2.5E-69 T 23-04-2016 LT40_RS07815 a1b87e36f29a3c9ac7fedee87c77e8b7 431 PRINTS PR00811 Bacterial general secretion pathway protein D signature 160 170 1.81181E-17 T 23-04-2016 IPR001775 GspD/PilQ family LT40_RS07815 a1b87e36f29a3c9ac7fedee87c77e8b7 431 PRINTS PR00811 Bacterial general secretion pathway protein D signature 263 273 1.81181E-17 T 23-04-2016 IPR001775 GspD/PilQ family LT40_RS07815 a1b87e36f29a3c9ac7fedee87c77e8b7 431 PRINTS PR00811 Bacterial general secretion pathway protein D signature 378 392 1.81181E-17 T 23-04-2016 IPR001775 GspD/PilQ family LT40_RS07815 a1b87e36f29a3c9ac7fedee87c77e8b7 431 PRINTS PR00811 Bacterial general secretion pathway protein D signature 226 250 1.81181E-17 T 23-04-2016 IPR001775 GspD/PilQ family LT40_RS07815 a1b87e36f29a3c9ac7fedee87c77e8b7 431 PRINTS PR00811 Bacterial general secretion pathway protein D signature 355 373 1.81181E-17 T 23-04-2016 IPR001775 GspD/PilQ family LT40_RS07815 a1b87e36f29a3c9ac7fedee87c77e8b7 431 PANTHER PTHR30332:SF1 150 403 2.5E-69 T 23-04-2016 LT40_RS07815 a1b87e36f29a3c9ac7fedee87c77e8b7 431 Pfam PF13629 Pilus formation protein N terminal region 26 94 3.4E-16 T 23-04-2016 IPR032789 Pilus formation protein, N-terminal LT40_RS12045 f0e83d487ef37de222f1555ee1bf1e33 336 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 14 335 51.297 T 23-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 LT40_RS12045 f0e83d487ef37de222f1555ee1bf1e33 336 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 101 119 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS12045 f0e83d487ef37de222f1555ee1bf1e33 336 Pfam PF01207 Dihydrouridine synthase (Dus) 22 326 2.5E-86 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS12045 f0e83d487ef37de222f1555ee1bf1e33 336 SUPERFAMILY SSF51395 19 328 1.91E-76 T 23-04-2016 LT40_RS12045 f0e83d487ef37de222f1555ee1bf1e33 336 PANTHER PTHR11082:SF29 13 329 6.8E-143 T 23-04-2016 LT40_RS12045 f0e83d487ef37de222f1555ee1bf1e33 336 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 18 329 4.6E-139 T 23-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 LT40_RS12045 f0e83d487ef37de222f1555ee1bf1e33 336 Gene3D G3DSA:3.20.20.70 18 261 3.6E-77 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS12045 f0e83d487ef37de222f1555ee1bf1e33 336 PANTHER PTHR11082 13 329 6.8E-143 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS12045 f0e83d487ef37de222f1555ee1bf1e33 336 PIRSF PIRSF006621 9 334 6.9E-78 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 Gene3D G3DSA:3.30.980.10 65 129 2.1E-39 T 23-04-2016 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 Gene3D G3DSA:3.30.980.10 187 223 2.1E-39 T 23-04-2016 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 SUPERFAMILY SSF52954 528 632 9.97E-30 T 23-04-2016 IPR004154 Anticodon-binding LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 SUPERFAMILY SSF81271 3 61 1.34E-14 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 PANTHER PTHR11451 1 636 0.0 T 23-04-2016 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.966 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 SUPERFAMILY SSF55186 63 240 2.09E-61 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 SUPERFAMILY SSF55681 242 525 2.68E-102 T 23-04-2016 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 629 3.6E-222 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 PANTHER PTHR11451:SF31 1 636 0.0 T 23-04-2016 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 Pfam PF02824 TGS domain 4 61 6.6E-10 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 Gene3D G3DSA:3.10.20.30 1 64 5.9E-22 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 9.6E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 9.6E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 9.6E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 9.6E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 9.6E-53 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 Pfam PF03129 Anticodon binding domain 540 628 1.7E-19 T 23-04-2016 IPR004154 Anticodon-binding LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 Gene3D G3DSA:3.40.50.800 530 633 7.3E-32 T 23-04-2016 IPR004154 Anticodon-binding LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 317 528 4.2E-45 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 SMART SM00863 169 218 3.6E-20 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 Gene3D G3DSA:3.30.54.20 131 186 6.0E-18 T 23-04-2016 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 Gene3D G3DSA:3.30.930.10 241 528 2.6E-123 T 23-04-2016 LT40_RS07505 f0cd40aa3e1600baf03fd867c4a83e62 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 218 1.5E-13 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LT40_RS02280 67664e01381cb485802e72c2a35b635d 250 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 113 248 1.2E-37 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal LT40_RS02280 67664e01381cb485802e72c2a35b635d 250 PANTHER PTHR36307 4 250 3.0E-41 T 23-04-2016 LT40_RS02280 67664e01381cb485802e72c2a35b635d 250 Pfam PF13144 Chaperone for flagella basal body P-ring formation 51 248 3.1E-60 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal LT40_RS02280 67664e01381cb485802e72c2a35b635d 250 SMART SM00858 125 187 1.9E-8 T 23-04-2016 IPR013974 SAF domain LT40_RS20675 aecc17987ecff4e2b35fe494c032a866 650 PANTHER PTHR32552 34 650 8.0E-111 T 23-04-2016 LT40_RS20675 aecc17987ecff4e2b35fe494c032a866 650 Gene3D G3DSA:2.40.170.20 161 650 2.6E-92 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS20675 aecc17987ecff4e2b35fe494c032a866 650 SUPERFAMILY SSF56935 31 650 1.05E-120 T 23-04-2016 LT40_RS20675 aecc17987ecff4e2b35fe494c032a866 650 Pfam PF00593 TonB dependent receptor 405 648 2.4E-40 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS20675 aecc17987ecff4e2b35fe494c032a866 650 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 158 9.4E-26 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS20675 aecc17987ecff4e2b35fe494c032a866 650 Gene3D G3DSA:2.170.130.10 32 160 2.5E-39 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS20675 aecc17987ecff4e2b35fe494c032a866 650 PANTHER PTHR32552:SF15 34 650 8.0E-111 T 23-04-2016 LT40_RS02910 21fdef1baf1799a8b00cabe633ebc138 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 6.1E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS02910 21fdef1baf1799a8b00cabe633ebc138 304 SUPERFAMILY SSF53850 92 295 9.56E-40 T 23-04-2016 LT40_RS02910 21fdef1baf1799a8b00cabe633ebc138 304 PANTHER PTHR30118 1 294 8.7E-91 T 23-04-2016 LT40_RS02910 21fdef1baf1799a8b00cabe633ebc138 304 Pfam PF03466 LysR substrate binding domain 98 295 3.1E-28 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS02910 21fdef1baf1799a8b00cabe633ebc138 304 Gene3D G3DSA:3.40.190.10 175 269 2.2E-23 T 23-04-2016 LT40_RS02910 21fdef1baf1799a8b00cabe633ebc138 304 Gene3D G3DSA:1.10.10.10 3 87 3.8E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02910 21fdef1baf1799a8b00cabe633ebc138 304 PANTHER PTHR30118:SF7 1 294 8.7E-91 T 23-04-2016 LT40_RS02910 21fdef1baf1799a8b00cabe633ebc138 304 Gene3D G3DSA:3.40.190.10 92 174 4.3E-26 T 23-04-2016 LT40_RS02910 21fdef1baf1799a8b00cabe633ebc138 304 Gene3D G3DSA:3.40.190.10 273 296 4.3E-26 T 23-04-2016 LT40_RS02910 21fdef1baf1799a8b00cabe633ebc138 304 SUPERFAMILY SSF46785 5 86 7.39E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 SMART SM00534 606 792 2.5E-117 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 SUPERFAMILY SSF55271 2 113 1.02E-43 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 PANTHER PTHR11361:SF86 2 795 0.0 T 23-04-2016 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 SUPERFAMILY SSF53150 114 266 1.03E-41 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 Gene3D G3DSA:3.30.420.110 126 256 1.3E-42 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 Pfam PF05188 MutS domain II 128 253 1.1E-28 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 Pfam PF00488 MutS domain V 609 795 1.2E-82 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 Gene3D G3DSA:3.40.1170.10 3 120 2.6E-52 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 Pfam PF01624 MutS domain I 8 119 1.1E-43 T 23-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 847 25.195 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 SUPERFAMILY SSF48334 267 564 3.27E-88 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 852 0.0 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 PANTHER PTHR11361 2 795 0.0 T 23-04-2016 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 Gene3D G3DSA:1.10.1420.10 315 476 3.9E-55 T 23-04-2016 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 Pfam PF05190 MutS family domain IV 427 517 5.7E-29 T 23-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 Gene3D G3DSA:3.40.50.300 568 795 7.9E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 SUPERFAMILY SSF52540 568 795 7.97E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 Pfam PF05192 MutS domain III 270 558 3.7E-39 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LT40_RS00575 36f80eeb3a6550580d92365d05e751fc 855 SMART SM00533 283 590 4.6E-107 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 Gene3D G3DSA:3.90.190.20 313 448 6.7E-33 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 60.119 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 PANTHER PTHR23135 1 439 2.6E-270 T 23-04-2016 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 SUPERFAMILY SSF51984 1 90 1.15E-23 T 23-04-2016 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 Gene3D G3DSA:3.40.1190.10 92 312 3.1E-85 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 Gene3D G3DSA:3.40.50.720 1 90 1.0E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 Pfam PF01225 Mur ligase family, catalytic domain 2 100 2.2E-19 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 Pfam PF08245 Mur ligase middle domain 108 291 7.8E-22 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 SUPERFAMILY SSF53244 311 448 7.59E-37 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 SUPERFAMILY SSF53623 94 308 1.83E-50 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 2.0E-215 T 23-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 359 1.5E-9 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS18740 7905e5926a1e38630fe90d6d575b6ee7 449 PANTHER PTHR23135:SF17 1 439 2.6E-270 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 PANTHER PTHR32063 1 1050 0.0 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 PANTHER PTHR32063:SF11 1 1050 0.0 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 SUPERFAMILY SSF82866 299 499 2.35E-51 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1049 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 SUPERFAMILY SSF82693 576 682 1.15E-27 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 Gene3D G3DSA:1.10.3850.10 285 501 7.8E-62 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 Gene3D G3DSA:1.10.3850.10 825 1039 4.1E-59 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 SUPERFAMILY SSF82693 277 333 2.79E-29 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 SUPERFAMILY SSF82714 733 819 9.16E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 Gene3D G3DSA:3.30.70.1430 580 682 1.4E-30 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 Pfam PF00873 AcrB/AcrD/AcrF family 3 1038 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 SUPERFAMILY SSF82693 683 732 2.17E-27 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 SUPERFAMILY SSF82693 819 868 2.17E-27 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 Gene3D G3DSA:3.30.70.1430 41 141 7.5E-31 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 Gene3D G3DSA:3.30.2090.10 184 277 1.3E-26 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 Gene3D G3DSA:3.30.2090.10 733 821 1.8E-22 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 SUPERFAMILY SSF82866 842 1038 1.01E-45 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 SUPERFAMILY SSF82693 41 134 4.97E-25 T 23-04-2016 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 SUPERFAMILY SSF82714 185 274 2.62E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.6E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.6E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.6E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 PRINTS PR00702 Acriflavin resistance protein family signature 563 580 1.6E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.6E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.6E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 PRINTS PR00702 Acriflavin resistance protein family signature 632 646 1.6E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS12270 4103bc65033b64de2904d91ca0633c94 1059 SUPERFAMILY SSF82693 138 184 2.79E-29 T 23-04-2016 LT40_RS03555 d8fde822fe620566d140cfb1d2873680 213 SUPERFAMILY SSF48452 35 61 3.37E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS03555 d8fde822fe620566d140cfb1d2873680 213 SUPERFAMILY SSF48452 88 191 3.37E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS03555 d8fde822fe620566d140cfb1d2873680 213 PANTHER PTHR38035 1 210 1.5E-71 T 23-04-2016 LT40_RS03555 d8fde822fe620566d140cfb1d2873680 213 Pfam PF09976 Tetratricopeptide repeat-like domain 13 210 2.0E-60 T 23-04-2016 IPR018704 Tetratricopeptide repeat-like domain LT40_RS03555 d8fde822fe620566d140cfb1d2873680 213 PIRSF PIRSF006170 1 213 1.1E-63 T 23-04-2016 IPR026039 Uncharacterised protein family UPF0070 LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 Gene3D G3DSA:3.40.980.10 168 334 2.3E-60 T 23-04-2016 IPR001453 MoaB/Mog domain LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 Gene3D G3DSA:2.40.340.10 335 401 1.7E-11 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 SUPERFAMILY SSF63867 330 402 4.58E-16 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 PANTHER PTHR10192 9 404 1.8E-174 T 23-04-2016 LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 SUPERFAMILY SSF63882 9 181 2.88E-51 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 SUPERFAMILY SSF53218 182 326 2.62E-41 T 23-04-2016 IPR001453 MoaB/Mog domain LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 Gene3D G3DSA:3.90.105.10 136 167 6.8E-18 T 23-04-2016 LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 Pfam PF03453 MoeA N-terminal region (domain I and II) 12 172 8.5E-34 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 182 317 3.1E-30 T 23-04-2016 IPR001453 MoaB/Mog domain LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 PANTHER PTHR10192:SF17 9 404 1.8E-174 T 23-04-2016 LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 Gene3D G3DSA:2.170.190.11 56 135 1.1E-26 T 23-04-2016 LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 SMART SM00852 185 321 3.7E-41 T 23-04-2016 IPR001453 MoaB/Mog domain LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 Pfam PF00994 Probable molybdopterin binding domain 185 319 1.6E-26 T 23-04-2016 IPR001453 MoaB/Mog domain LT40_RS07230 a7c4ed39a651c2cf312e7afa9bc1f721 404 Pfam PF03454 MoeA C-terminal region (domain IV) 334 400 4.4E-13 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 PANTHER PTHR30620:SF36 579 723 2.8E-225 T 23-04-2016 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 PANTHER PTHR30620:SF36 23 559 2.8E-225 T 23-04-2016 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 Pfam PF14310 Fibronectin type III-like domain 640 706 5.4E-9 T 23-04-2016 IPR026891 Fibronectin type III-like domain LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 SMART SM01217 639 709 3.0E-7 T 23-04-2016 IPR026891 Fibronectin type III-like domain LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 Gene3D G3DSA:3.40.50.1700 588 609 5.7E-61 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 Gene3D G3DSA:3.40.50.1700 340 551 5.7E-61 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 353 607 2.9E-50 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 PRINTS PR00133 Glycosyl hydrolase family 3 signature 176 192 3.4E-29 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 PRINTS PR00133 Glycosyl hydrolase family 3 signature 99 118 3.4E-29 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 PRINTS PR00133 Glycosyl hydrolase family 3 signature 145 161 3.4E-29 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 PRINTS PR00133 Glycosyl hydrolase family 3 signature 69 85 3.4E-29 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 PRINTS PR00133 Glycosyl hydrolase family 3 signature 246 264 3.4E-29 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 SUPERFAMILY SSF52279 443 551 7.72E-48 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 SUPERFAMILY SSF52279 353 416 7.72E-48 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 SUPERFAMILY SSF52279 588 610 7.72E-48 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 69 316 1.0E-44 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 PANTHER PTHR30620 579 723 2.8E-225 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 PANTHER PTHR30620 23 559 2.8E-225 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 SUPERFAMILY SSF51445 20 351 2.84E-85 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS10515 f92ce718aa6d637e0bbe6851a78a2b32 728 Gene3D G3DSA:3.20.20.300 18 330 2.8E-91 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS02670 044710553079ae55eea236212d31e2f9 265 PANTHER PTHR24319 1 263 1.5E-48 T 23-04-2016 LT40_RS02670 044710553079ae55eea236212d31e2f9 265 SUPERFAMILY SSF51735 6 259 1.15E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02670 044710553079ae55eea236212d31e2f9 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS02670 044710553079ae55eea236212d31e2f9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02670 044710553079ae55eea236212d31e2f9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02670 044710553079ae55eea236212d31e2f9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02670 044710553079ae55eea236212d31e2f9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02670 044710553079ae55eea236212d31e2f9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02670 044710553079ae55eea236212d31e2f9 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02670 044710553079ae55eea236212d31e2f9 265 PANTHER PTHR24319:SF23 1 263 1.5E-48 T 23-04-2016 LT40_RS02670 044710553079ae55eea236212d31e2f9 265 Gene3D G3DSA:3.40.50.720 5 260 4.4E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02670 044710553079ae55eea236212d31e2f9 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 258 1.4E-50 T 23-04-2016 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 PANTHER PTHR30534 1 339 4.2E-112 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 Pfam PF14841 FliG middle domain 121 194 1.7E-22 T 23-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 2.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 2.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 40 66 2.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 2.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 201 226 2.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 11 27 2.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 120 143 2.6E-65 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 10 337 4.3E-101 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 SUPERFAMILY SSF48029 120 331 1.29E-67 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 Pfam PF14842 FliG N-terminal domain 10 110 7.8E-34 T 23-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 SUPERFAMILY SSF48029 13 123 2.09E-24 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 PANTHER PTHR30534:SF0 1 339 4.2E-112 T 23-04-2016 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 Pfam PF01706 FliG C-terminal domain 224 330 1.8E-41 T 23-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 PIRSF PIRSF003161 5 339 5.4E-118 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 Gene3D G3DSA:1.10.220.30 201 339 4.0E-44 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 Gene3D G3DSA:1.10.220.30 80 200 5.8E-27 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical LT40_RS02410 f25b0a851369f8529a90c8d7380de618 339 Gene3D G3DSA:1.10.220.30 14 78 3.3E-16 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical LT40_RS14820 af3455e3721eb1544bb294d2c521a1fa 281 Gene3D G3DSA:3.20.20.220 3 279 6.3E-106 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like LT40_RS14820 af3455e3721eb1544bb294d2c521a1fa 281 PANTHER PTHR21091 136 271 1.6E-39 T 23-04-2016 LT40_RS14820 af3455e3721eb1544bb294d2c521a1fa 281 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 7 278 2.5E-100 T 23-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 LT40_RS14820 af3455e3721eb1544bb294d2c521a1fa 281 PANTHER PTHR21091:SF31 136 271 1.6E-39 T 23-04-2016 LT40_RS14820 af3455e3721eb1544bb294d2c521a1fa 281 SUPERFAMILY SSF51730 4 279 6.28E-94 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like LT40_RS14820 af3455e3721eb1544bb294d2c521a1fa 281 Pfam PF02219 Methylenetetrahydrofolate reductase 7 277 4.8E-87 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 LT40_RS03380 932d1b685e9819fa4482d64c6995901e 401 PANTHER PTHR23542:SF1 2 401 5.9E-90 T 23-04-2016 LT40_RS03380 932d1b685e9819fa4482d64c6995901e 401 Gene3D G3DSA:1.20.1250.20 209 384 9.9E-12 T 23-04-2016 LT40_RS03380 932d1b685e9819fa4482d64c6995901e 401 PANTHER PTHR23542 2 401 5.9E-90 T 23-04-2016 LT40_RS03380 932d1b685e9819fa4482d64c6995901e 401 Gene3D G3DSA:1.20.1250.20 14 194 8.7E-5 T 23-04-2016 LT40_RS03380 932d1b685e9819fa4482d64c6995901e 401 SUPERFAMILY SSF103473 7 390 2.49E-25 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS13365 955e4460f0b9a599212b6f7127b18330 101 PANTHER PTHR14552 1 101 3.8E-24 T 23-04-2016 LT40_RS13365 955e4460f0b9a599212b6f7127b18330 101 PIRSF PIRSF029826 1 101 3.9E-36 T 23-04-2016 IPR011394 NTP Pyrophosphohydrolase MazG-related, RS21-C6 LT40_RS13365 955e4460f0b9a599212b6f7127b18330 101 SUPERFAMILY SSF101386 1 99 1.01E-28 T 23-04-2016 LT40_RS13365 955e4460f0b9a599212b6f7127b18330 101 Gene3D G3DSA:1.10.287.1080 1 92 7.4E-20 T 23-04-2016 LT40_RS13365 955e4460f0b9a599212b6f7127b18330 101 Pfam PF12643 MazG-like family 31 97 2.7E-10 T 23-04-2016 IPR025984 MazG-like domain KEGG: 00240+3.6.1.12 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 Gene3D G3DSA:3.40.50.2300 1 120 5.5E-37 T 23-04-2016 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 Pfam PF00072 Response regulator receiver domain 4 116 7.5E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 Gene3D G3DSA:1.10.10.10 121 209 2.8E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.6E-10 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 SUPERFAMILY SSF52172 1 132 3.27E-34 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 SUPERFAMILY SSF46894 137 209 1.26E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 SMART SM00421 146 203 1.2E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 SMART SM00448 2 115 5.0E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 PANTHER PTHR26402:SF598 2 205 1.4E-91 T 23-04-2016 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 PANTHER PTHR26402 2 205 1.4E-91 T 23-04-2016 LT40_RS18125 87373b7a2da98e24482d7d5f1254a5b3 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 6.8E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 SUPERFAMILY SSF81767 227 368 7.98E-39 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 818 0.0 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 SUPERFAMILY SSF52540 417 618 2.21E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 PANTHER PTHR30612 550 913 0.0 T 23-04-2016 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 PANTHER PTHR30612 5 520 0.0 T 23-04-2016 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 Gene3D G3DSA:1.10.3060.10 648 831 4.7E-60 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 Pfam PF02810 SEC-C motif 893 911 4.3E-10 T 23-04-2016 IPR004027 SEC-C motif LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 Gene3D G3DSA:3.40.50.300 369 416 1.4E-126 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 Gene3D G3DSA:3.40.50.300 3 228 1.4E-126 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 Pfam PF01043 SecA preprotein cross-linking domain 232 358 2.5E-33 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 SUPERFAMILY SSF52540 368 415 2.86E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 SUPERFAMILY SSF52540 5 228 2.86E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 SUPERFAMILY SSF81886 620 840 1.31E-79 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 SUPERFAMILY SSF81886 889 901 1.31E-79 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 SMART SM00957 6 402 5.2E-296 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 Pfam PF07517 SecA DEAD-like domain 6 401 4.8E-132 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 Pfam PF07516 SecA Wing and Scaffold domain 617 830 3.0E-68 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 Gene3D G3DSA:3.40.50.300 417 619 3.1E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.793 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 PRINTS PR00906 SecA protein signature 413 426 2.0E-69 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 PRINTS PR00906 SecA protein signature 376 393 2.0E-69 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 PRINTS PR00906 SecA protein signature 63 87 2.0E-69 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 PRINTS PR00906 SecA protein signature 101 115 2.0E-69 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 PRINTS PR00906 SecA protein signature 117 127 2.0E-69 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 PRINTS PR00906 SecA protein signature 339 361 2.0E-69 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 PRINTS PR00906 SecA protein signature 170 190 2.0E-69 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 SMART SM00958 228 358 4.7E-69 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LT40_RS04095 4bf3f44743eaeb6ee72a7d5125a2347a 913 Gene3D G3DSA:3.90.1440.10 230 368 3.5E-41 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 SUPERFAMILY SSF48108 396 554 1.7E-51 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.107 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 SUPERFAMILY SSF56059 673 933 3.71E-103 T 23-04-2016 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Gene3D G3DSA:3.30.1490.20 142 199 1.3E-26 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.0E-39 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.416 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.3E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.3E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.3E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.3E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 2.3E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.3E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.3E-66 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 SMART SM00851 955 1041 1.0E-32 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Gene3D G3DSA:3.30.470.20 745 934 1.8E-77 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Gene3D G3DSA:3.30.470.20 200 399 3.6E-75 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 SMART SM01096 424 547 1.4E-73 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 3.0E-72 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 1.3E-32 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 PANTHER PTHR11405:SF5 1 1069 0.0 T 23-04-2016 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 SUPERFAMILY SSF52335 938 1069 1.26E-41 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Gene3D G3DSA:3.40.50.20 539 662 7.8E-62 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 PANTHER PTHR11405 1 1069 0.0 T 23-04-2016 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Gene3D G3DSA:1.10.1030.10 400 538 1.5E-50 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Pfam PF02142 MGS-like domain 959 1041 8.1E-20 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Gene3D G3DSA:3.40.50.20 4 108 7.4E-46 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 SUPERFAMILY SSF52440 1 127 3.88E-50 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 SUPERFAMILY SSF52440 557 675 9.78E-50 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Gene3D G3DSA:3.40.50.1380 938 1069 4.4E-43 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 Gene3D G3DSA:3.30.1490.20 688 744 1.7E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS12955 b8a79f95c6f0e43e1638339f22e8820c 1073 SUPERFAMILY SSF56059 128 401 4.6E-109 T 23-04-2016 LT40_RS06925 5dc90c83968f2b1bc88c1eab0e1d4ea5 159 Gene3D G3DSA:1.10.10.10 124 152 3.0E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS06925 5dc90c83968f2b1bc88c1eab0e1d4ea5 159 Pfam PF01381 Helix-turn-helix 11 60 4.5E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS06925 5dc90c83968f2b1bc88c1eab0e1d4ea5 159 Pfam PF13384 Homeodomain-like domain 117 152 5.3E-6 T 23-04-2016 LT40_RS06925 5dc90c83968f2b1bc88c1eab0e1d4ea5 159 SUPERFAMILY SSF47413 2 65 7.88E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS06925 5dc90c83968f2b1bc88c1eab0e1d4ea5 159 Gene3D G3DSA:1.10.260.40 2 65 2.8E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS06925 5dc90c83968f2b1bc88c1eab0e1d4ea5 159 SMART SM00530 10 63 0.0053 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS04915 5c48b850fa7bdb78f4e5a0a8d86e67b9 196 SUPERFAMILY SSF50249 124 191 5.78E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS04915 5c48b850fa7bdb78f4e5a0a8d86e67b9 196 PRINTS PR00050 Cold shock protein signature 150 159 5.9E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS04915 5c48b850fa7bdb78f4e5a0a8d86e67b9 196 PRINTS PR00050 Cold shock protein signature 165 183 5.9E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS04915 5c48b850fa7bdb78f4e5a0a8d86e67b9 196 PRINTS PR00050 Cold shock protein signature 130 145 5.9E-15 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS04915 5c48b850fa7bdb78f4e5a0a8d86e67b9 196 Gene3D G3DSA:2.40.50.140 129 190 4.3E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS04915 5c48b850fa7bdb78f4e5a0a8d86e67b9 196 Pfam PF00313 'Cold-shock' DNA-binding domain 129 190 2.6E-25 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS04915 5c48b850fa7bdb78f4e5a0a8d86e67b9 196 PANTHER PTHR11544 120 195 1.7E-32 T 23-04-2016 LT40_RS04915 5c48b850fa7bdb78f4e5a0a8d86e67b9 196 ProSitePatterns PS00352 'Cold-shock' domain signature. 141 159 - T 23-04-2016 IPR019844 Cold-shock conserved site LT40_RS04915 5c48b850fa7bdb78f4e5a0a8d86e67b9 196 SMART SM00357 129 192 2.5E-24 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.0E-44 T 23-04-2016 LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 390 1.0E-95 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 Gene3D G3DSA:3.30.230.10 5 168 2.2E-34 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 PANTHER PTHR32039 1 493 8.5E-243 T 23-04-2016 LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 Gene3D G3DSA:3.40.50.300 189 387 1.6E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 493 1.9E-27 T 23-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 1.1E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 1.1E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 1.1E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 340 352 1.1E-5 T 23-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 SUPERFAMILY SSF54211 9 169 5.69E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 PANTHER PTHR32039:SF7 1 493 8.5E-243 T 23-04-2016 IPR004482 Mg chelatase-related protein LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 SUPERFAMILY SSF52540 188 493 1.92E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 493 7.0E-188 T 23-04-2016 IPR004482 Mg chelatase-related protein LT40_RS16670 897de16d0a0a9f191815678d611c4a8c 497 SMART SM00382 210 391 2.3E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS20095 d4561d14cee1a78365206900858d4c9d 91 Pfam PF07130 YebG protein 1 71 5.1E-24 T 23-04-2016 IPR009813 Uncharacterised protein family YebG LT40_RS20095 d4561d14cee1a78365206900858d4c9d 91 Gene3D G3DSA:1.10.10.710 18 86 9.6E-26 T 23-04-2016 IPR009813 Uncharacterised protein family YebG LT40_RS08895 d50dee3534c4f51cc0a4351223962fce 943 SUPERFAMILY SSF51126 42 499 1.88E-32 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor LT40_RS08895 d50dee3534c4f51cc0a4351223962fce 943 Gene3D G3DSA:2.40.128.130 627 943 6.9E-61 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS08895 d50dee3534c4f51cc0a4351223962fce 943 SMART SM00869 669 929 1.6E-33 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS08895 d50dee3534c4f51cc0a4351223962fce 943 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 386 943 3.0E-65 T 23-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 LT40_RS08895 d50dee3534c4f51cc0a4351223962fce 943 SUPERFAMILY SSF103515 640 943 1.31E-38 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS08895 d50dee3534c4f51cc0a4351223962fce 943 Pfam PF03797 Autotransporter beta-domain 672 924 1.6E-41 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 PANTHER PTHR23152 1 943 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 SUPERFAMILY SSF52518 126 550 9.25E-87 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 797 941 3.1E-54 T 23-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 PIRSF PIRSF000157 1 943 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 Pfam PF00676 Dehydrogenase E1 component 220 526 6.6E-52 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 1.8E-17 T 23-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 Pfam PF02779 Transketolase, pyrimidine binding domain 599 793 6.3E-65 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 PANTHER PTHR23152:SF4 1 943 0.0 T 23-04-2016 LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 SMART SM00861 599 792 9.7E-58 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 941 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 Gene3D G3DSA:3.40.50.970 660 798 2.8E-20 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 Gene3D G3DSA:3.40.50.970 166 541 4.2E-77 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12580 c7246769217373d1d601d4d7568a910c 943 SUPERFAMILY SSF52518 582 799 8.33E-51 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS04285 18588b0b1c573338a4edcf9faa26f1bd 479 PANTHER PTHR11046:SF2 3 467 1.9E-220 T 23-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 LT40_RS04285 18588b0b1c573338a4edcf9faa26f1bd 479 Gene3D G3DSA:3.30.420.10 3 194 1.4E-75 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS04285 18588b0b1c573338a4edcf9faa26f1bd 479 Pfam PF08411 Exonuclease C-terminal 205 468 2.6E-93 T 23-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 LT40_RS04285 18588b0b1c573338a4edcf9faa26f1bd 479 SMART SM00479 4 196 0.0033 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS04285 18588b0b1c573338a4edcf9faa26f1bd 479 Pfam PF00929 Exonuclease 7 186 1.5E-23 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS04285 18588b0b1c573338a4edcf9faa26f1bd 479 SUPERFAMILY SSF53098 5 460 4.28E-120 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS04285 18588b0b1c573338a4edcf9faa26f1bd 479 PIRSF PIRSF000977 1 474 6.7E-196 T 23-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 LT40_RS04285 18588b0b1c573338a4edcf9faa26f1bd 479 PANTHER PTHR11046 3 467 1.9E-220 T 23-04-2016 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 PANTHER PTHR11702 1 355 2.8E-173 T 23-04-2016 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 PANTHER PTHR11702 373 393 2.8E-173 T 23-04-2016 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 Gene3D G3DSA:2.70.210.12 2 156 7.6E-60 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.0E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.0E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.0E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.0E-33 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 PANTHER PTHR11702:SF3 1 355 2.8E-173 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 PANTHER PTHR11702:SF3 373 393 2.8E-173 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 SUPERFAMILY SSF82051 2 158 1.05E-56 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 PIRSF PIRSF002401 1 380 1.2E-136 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 7.5E-146 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 Pfam PF01018 GTP1/OBG 3 158 2.6E-61 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 SUPERFAMILY SSF52540 151 334 1.8E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 Pfam PF01926 50S ribosome-binding GTPase 161 284 8.6E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.269 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LT40_RS19420 8696acb7eedaf89a5bc44c90417b1ccd 406 Gene3D G3DSA:3.40.50.300 160 335 2.3E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02050 f3e90ccaf3bfc330dd4d9fd88f5b4071 288 Gene3D G3DSA:1.10.3720.10 5 277 3.1E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02050 f3e90ccaf3bfc330dd4d9fd88f5b4071 288 SUPERFAMILY SSF161098 51 276 1.09E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02050 f3e90ccaf3bfc330dd4d9fd88f5b4071 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 277 4.8E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02050 f3e90ccaf3bfc330dd4d9fd88f5b4071 288 PANTHER PTHR30193:SF6 1 279 7.3E-76 T 23-04-2016 LT40_RS02050 f3e90ccaf3bfc330dd4d9fd88f5b4071 288 PANTHER PTHR30193 1 279 7.3E-76 T 23-04-2016 LT40_RS16700 417def0120ec5eba5ad8a519e74927ad 141 PANTHER PTHR30615 1 141 2.7E-70 T 23-04-2016 LT40_RS16700 417def0120ec5eba5ad8a519e74927ad 141 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 3.0E-34 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 LT40_RS16700 417def0120ec5eba5ad8a519e74927ad 141 SUPERFAMILY SSF111038 1 139 6.67E-45 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 LT40_RS16700 417def0120ec5eba5ad8a519e74927ad 141 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 139 5.5E-41 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 LT40_RS16700 417def0120ec5eba5ad8a519e74927ad 141 Gene3D G3DSA:2.60.120.460 1 139 1.1E-51 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 LT40_RS16700 417def0120ec5eba5ad8a519e74927ad 141 PIRSF PIRSF004681 1 139 1.1E-41 T 23-04-2016 IPR001602 Uncharacterised protein family UPF0047 LT40_RS07715 2b85867e786cd5b122f01ec2897b86f6 603 PANTHER PTHR33121 178 586 8.6E-103 T 23-04-2016 LT40_RS07715 2b85867e786cd5b122f01ec2897b86f6 603 SUPERFAMILY SSF55781 30 162 5.89E-22 T 23-04-2016 IPR029016 GAF domain-like LT40_RS07715 2b85867e786cd5b122f01ec2897b86f6 603 Gene3D G3DSA:3.30.450.40 13 158 1.4E-9 T 23-04-2016 IPR029016 GAF domain-like LT40_RS07715 2b85867e786cd5b122f01ec2897b86f6 603 Gene3D G3DSA:3.30.70.270 170 319 1.0E-6 T 23-04-2016 LT40_RS07715 2b85867e786cd5b122f01ec2897b86f6 603 SMART SM00052 334 580 5.7E-91 T 23-04-2016 IPR001633 EAL domain LT40_RS07715 2b85867e786cd5b122f01ec2897b86f6 603 SUPERFAMILY SSF55073 174 319 2.98E-8 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS07715 2b85867e786cd5b122f01ec2897b86f6 603 Pfam PF00563 EAL domain 342 575 3.5E-71 T 23-04-2016 IPR001633 EAL domain LT40_RS07715 2b85867e786cd5b122f01ec2897b86f6 603 Pfam PF01590 GAF domain 30 157 2.4E-7 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS07715 2b85867e786cd5b122f01ec2897b86f6 603 SUPERFAMILY SSF141868 349 585 1.22E-78 T 23-04-2016 IPR001633 EAL domain LT40_RS07715 2b85867e786cd5b122f01ec2897b86f6 603 Gene3D G3DSA:3.20.20.450 340 586 7.3E-83 T 23-04-2016 IPR001633 EAL domain LT40_RS07715 2b85867e786cd5b122f01ec2897b86f6 603 PANTHER PTHR33121:SF13 178 586 8.6E-103 T 23-04-2016 LT40_RS03395 7721be687a6331549be678ca9e6fcd06 354 Gene3D G3DSA:3.40.1780.10 1 62 8.5E-103 T 23-04-2016 LT40_RS03395 7721be687a6331549be678ca9e6fcd06 354 Gene3D G3DSA:3.40.1780.10 175 337 8.5E-103 T 23-04-2016 LT40_RS03395 7721be687a6331549be678ca9e6fcd06 354 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 337 9.2E-147 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS03395 7721be687a6331549be678ca9e6fcd06 354 PANTHER PTHR30307:SF0 2 343 7.4E-181 T 23-04-2016 LT40_RS03395 7721be687a6331549be678ca9e6fcd06 354 SUPERFAMILY SSF111337 1 336 1.7E-136 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS03395 7721be687a6331549be678ca9e6fcd06 354 Gene3D G3DSA:2.40.10.240 64 132 4.3E-15 T 23-04-2016 LT40_RS03395 7721be687a6331549be678ca9e6fcd06 354 Pfam PF02547 Queuosine biosynthesis protein 4 336 9.3E-136 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS03395 7721be687a6331549be678ca9e6fcd06 354 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 337 47.466 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS03395 7721be687a6331549be678ca9e6fcd06 354 PANTHER PTHR30307 2 343 7.4E-181 T 23-04-2016 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 SMART SM01210 329 422 3.6E-52 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 SMART SM01209 102 295 3.3E-140 T 23-04-2016 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 422 9.2E-177 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 SUPERFAMILY SSF52440 1 102 2.59E-34 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 Gene3D G3DSA:3.30.470.20 190 327 2.5E-61 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 Gene3D G3DSA:3.40.50.20 2 94 7.9E-36 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 Gene3D G3DSA:3.30.1490.20 120 189 5.9E-34 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 PANTHER PTHR10520 1 425 4.9E-284 T 23-04-2016 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 330 420 1.6E-27 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 4.7E-33 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 Gene3D G3DSA:3.90.600.10 330 422 4.1E-34 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 SUPERFAMILY SSF56059 103 320 1.77E-64 T 23-04-2016 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 289 296 - T 23-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 422 42.08 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 SUPERFAMILY SSF51246 328 423 6.28E-32 T 23-04-2016 IPR011054 Rudiment single hybrid motif LT40_RS13480 fb92cda23b2980cbe102d092a66f626b 428 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 102 295 5.2E-83 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS10710 af1bb7e0fed6b0f2c16633d24207a2fb 515 PANTHER PTHR13285 1 306 5.4E-123 T 23-04-2016 LT40_RS10710 af1bb7e0fed6b0f2c16633d24207a2fb 515 PANTHER PTHR13285 325 463 5.4E-123 T 23-04-2016 LT40_RS10710 af1bb7e0fed6b0f2c16633d24207a2fb 515 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 142 301 1.1E-17 T 23-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT LT40_RS10710 af1bb7e0fed6b0f2c16633d24207a2fb 515 PIRSF PIRSF016636 1 515 1.7E-127 T 23-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB LT40_RS10710 af1bb7e0fed6b0f2c16633d24207a2fb 515 PANTHER PTHR13285:SF23 1 306 5.4E-123 T 23-04-2016 LT40_RS10710 af1bb7e0fed6b0f2c16633d24207a2fb 515 PANTHER PTHR13285:SF23 325 463 5.4E-123 T 23-04-2016 LT40_RS10710 af1bb7e0fed6b0f2c16633d24207a2fb 515 PIRSF PIRSF500217 1 515 4.1E-125 T 23-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 LT40_RS14940 57812516a006857dd696906207ca3389 249 PANTHER PTHR18966 2 245 4.3E-79 T 23-04-2016 LT40_RS14940 57812516a006857dd696906207ca3389 249 SUPERFAMILY SSF53850 4 247 2.3E-73 T 23-04-2016 LT40_RS14940 57812516a006857dd696906207ca3389 249 Gene3D G3DSA:3.40.190.10 113 205 3.1E-22 T 23-04-2016 LT40_RS14940 57812516a006857dd696906207ca3389 249 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LT40_RS14940 57812516a006857dd696906207ca3389 249 PANTHER PTHR18966:SF152 2 245 4.3E-79 T 23-04-2016 LT40_RS14940 57812516a006857dd696906207ca3389 249 SMART SM00062 25 247 7.0E-66 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS14940 57812516a006857dd696906207ca3389 249 Gene3D G3DSA:3.40.190.10 24 111 1.0E-46 T 23-04-2016 LT40_RS14940 57812516a006857dd696906207ca3389 249 Gene3D G3DSA:3.40.190.10 207 247 1.0E-46 T 23-04-2016 LT40_RS14940 57812516a006857dd696906207ca3389 249 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 244 4.8E-68 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 Gene3D G3DSA:1.10.287.130 413 482 5.6E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 Gene3D G3DSA:3.30.450.20 260 378 3.1E-25 T 23-04-2016 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 Pfam PF00072 Response regulator receiver domain 670 770 7.6E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 SUPERFAMILY SSF55785 250 378 2.44E-17 T 23-04-2016 IPR000014 PAS domain LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 258 387 9.6E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 PANTHER PTHR24423:SF438 260 395 6.2E-151 T 23-04-2016 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 PANTHER PTHR24423:SF438 416 781 6.2E-151 T 23-04-2016 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 Gene3D G3DSA:3.30.565.10 486 645 9.1E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 Pfam PF08447 PAS fold 286 374 1.6E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 SMART SM00388 420 486 7.8E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 SUPERFAMILY SSF55781 3 87 3.27E-9 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 SMART SM00448 667 774 5.2E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 SUPERFAMILY SSF47384 409 483 8.63E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 SUPERFAMILY SSF52172 669 777 2.28E-24 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 SUPERFAMILY SSF55781 126 260 7.41E-10 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 Gene3D G3DSA:3.40.50.2300 669 777 5.0E-26 T 23-04-2016 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 644 6.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 625 6.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 590 6.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 604 6.7E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 SUPERFAMILY SSF55874 477 645 1.96E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 PANTHER PTHR24423 260 395 6.2E-151 T 23-04-2016 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 PANTHER PTHR24423 416 781 6.2E-151 T 23-04-2016 LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 528 645 3.9E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 SMART SM00387 527 647 2.1E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 Gene3D G3DSA:3.30.450.40 91 259 1.9E-8 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 Gene3D G3DSA:3.30.450.40 4 87 3.8E-8 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 SMART SM00091 262 329 4.9E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS08860 f6e6649de2bd19f747887cf727886400 781 Pfam PF00512 His Kinase A (phospho-acceptor) domain 421 484 1.4E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09890 c7e868355a453e231e5591ead751ba62 117 Gene3D G3DSA:3.30.1330.40 6 116 2.0E-25 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS09890 c7e868355a453e231e5591ead751ba62 117 PANTHER PTHR11803 12 116 4.1E-32 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS09890 c7e868355a453e231e5591ead751ba62 117 Pfam PF01042 Endoribonuclease L-PSP 5 116 7.3E-24 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS09890 c7e868355a453e231e5591ead751ba62 117 SUPERFAMILY SSF55298 4 116 2.83E-29 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS09890 c7e868355a453e231e5591ead751ba62 117 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 93 111 - T 23-04-2016 IPR019897 RidA, conserved site LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 Gene3D G3DSA:3.90.180.10 1 188 4.8E-52 T 23-04-2016 IPR011032 GroES-like LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 SUPERFAMILY SSF51735 164 351 3.81E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 150 4.7E-28 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 Gene3D G3DSA:3.40.50.720 189 330 3.0E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 1.2E-11 T 23-04-2016 IPR027399 Alcohol dehydrogenase GroES-associated LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 PANTHER PTHR11695 288 397 4.0E-165 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 PANTHER PTHR11695 12 106 4.0E-165 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 PANTHER PTHR11695 127 266 4.0E-165 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 Pfam PF00107 Zinc-binding dehydrogenase 197 282 9.0E-9 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 PANTHER PTHR11695:SF281 288 397 4.0E-165 T 23-04-2016 LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 PANTHER PTHR11695:SF281 12 106 4.0E-165 T 23-04-2016 LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 PANTHER PTHR11695:SF281 127 266 4.0E-165 T 23-04-2016 LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 SUPERFAMILY SSF50129 1 198 4.11E-59 T 23-04-2016 IPR011032 GroES-like LT40_RS12450 cb18fa1513c12658d2adb452683c2511 408 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Gene3D G3DSA:3.50.40.10 199 391 3.5E-82 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 2.1E-28 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Pfam PF03484 tRNA synthetase B5 domain 404 471 2.6E-17 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 PANTHER PTHR10947:SF0 2 791 0.0 T 23-04-2016 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 PANTHER PTHR10947 2 791 0.0 T 23-04-2016 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Gene3D G3DSA:3.30.70.380 700 791 1.1E-29 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 SUPERFAMILY SSF54991 692 791 4.05E-30 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Gene3D G3DSA:3.30.56.10 154 183 6.3E-23 T 23-04-2016 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Gene3D G3DSA:3.30.56.10 1 38 6.3E-23 T 23-04-2016 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 46.285 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 SUPERFAMILY SSF46955 403 475 6.87E-18 T 23-04-2016 IPR009061 Putative DNA-binding domain LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 2.0E-254 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 SMART SM00896 698 791 1.3E-43 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Pfam PF03483 B3/4 domain 211 384 1.8E-70 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Gene3D G3DSA:3.30.930.10 497 686 1.1E-64 T 23-04-2016 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 SUPERFAMILY SSF56037 195 395 6.8E-74 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Gene3D G3DSA:2.40.50.140 40 153 5.3E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 SMART SM00873 211 384 1.1E-94 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 SUPERFAMILY SSF55681 467 683 1.34E-53 T 23-04-2016 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 SUPERFAMILY SSF50249 36 191 9.06E-49 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Gene3D G3DSA:3.30.56.20 402 475 5.8E-24 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 Pfam PF01588 Putative tRNA binding domain 45 144 4.6E-25 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 LT40_RS07530 71e65f8b4cbd665bfc6f3a59a3396e14 792 SMART SM00874 402 471 6.0E-28 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 LT40_RS07240 29f8d9f9e95a5776dad580e1110b289e 296 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 7 288 1.2E-57 T 23-04-2016 IPR005218 Diacylglycerol/lipid kinase LT40_RS07240 29f8d9f9e95a5776dad580e1110b289e 296 SMART SM00046 6 125 1.2E-10 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 LT40_RS07240 29f8d9f9e95a5776dad580e1110b289e 296 SUPERFAMILY SSF111331 3 288 1.55E-61 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain LT40_RS07240 29f8d9f9e95a5776dad580e1110b289e 296 PANTHER PTHR12358 4 293 4.4E-42 T 23-04-2016 LT40_RS07240 29f8d9f9e95a5776dad580e1110b289e 296 Pfam PF00781 Diacylglycerol kinase catalytic domain 12 125 6.4E-24 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 LT40_RS07240 29f8d9f9e95a5776dad580e1110b289e 296 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 3 295 47.063 T 23-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 LT40_RS07240 29f8d9f9e95a5776dad580e1110b289e 296 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 5 294 3.8E-136 T 23-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 LT40_RS02525 75c771e71899c93d4a4415e91f394bfb 373 SUPERFAMILY SSF52738 187 372 2.22E-64 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS02525 75c771e71899c93d4a4415e91f394bfb 373 SMART SM00448 3 122 1.7E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02525 75c771e71899c93d4a4415e91f394bfb 373 Pfam PF01339 CheB methylesterase 192 368 3.0E-58 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS02525 75c771e71899c93d4a4415e91f394bfb 373 PANTHER PTHR24421:SF16 1 368 8.8E-168 T 23-04-2016 LT40_RS02525 75c771e71899c93d4a4415e91f394bfb 373 PANTHER PTHR24421 1 368 8.8E-168 T 23-04-2016 LT40_RS02525 75c771e71899c93d4a4415e91f394bfb 373 Pfam PF00072 Response regulator receiver domain 5 109 8.3E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02525 75c771e71899c93d4a4415e91f394bfb 373 SUPERFAMILY SSF52172 3 109 2.42E-28 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS02525 75c771e71899c93d4a4415e91f394bfb 373 Gene3D G3DSA:3.40.50.2300 3 121 6.5E-30 T 23-04-2016 LT40_RS02525 75c771e71899c93d4a4415e91f394bfb 373 PIRSF PIRSF000876 1 373 2.3E-134 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS02525 75c771e71899c93d4a4415e91f394bfb 373 Gene3D G3DSA:3.40.50.180 185 372 5.9E-74 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS02525 75c771e71899c93d4a4415e91f394bfb 373 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 373 39.847 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS00030 60f482050590b5d64e68ceb5a82afc52 289 PANTHER PTHR30126 1 281 2.9E-54 T 23-04-2016 LT40_RS00030 60f482050590b5d64e68ceb5a82afc52 289 Gene3D G3DSA:1.10.10.10 1 84 7.1E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00030 60f482050590b5d64e68ceb5a82afc52 289 SUPERFAMILY SSF46785 1 107 9.17E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00030 60f482050590b5d64e68ceb5a82afc52 289 SUPERFAMILY SSF53850 85 283 8.8E-30 T 23-04-2016 LT40_RS00030 60f482050590b5d64e68ceb5a82afc52 289 PANTHER PTHR30126:SF31 1 281 2.9E-54 T 23-04-2016 LT40_RS00030 60f482050590b5d64e68ceb5a82afc52 289 Pfam PF03466 LysR substrate binding domain 86 248 2.0E-29 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS00030 60f482050590b5d64e68ceb5a82afc52 289 Gene3D G3DSA:3.40.190.10 193 249 2.7E-4 T 23-04-2016 LT40_RS00030 60f482050590b5d64e68ceb5a82afc52 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.5E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS00030 60f482050590b5d64e68ceb5a82afc52 289 Gene3D G3DSA:3.40.190.10 87 192 5.9E-23 T 23-04-2016 LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 PANTHER PTHR11911 1 460 1.0E-39 T 23-04-2016 LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 SMART SM00924 64 167 8.7E-34 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 Gene3D G3DSA:1.25.60.10 40 157 1.1E-24 T 23-04-2016 LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 TIGRFAM TIGR00400 mgtE: magnesium transporter 42 481 8.6E-86 T 23-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 SUPERFAMILY SSF54631 167 305 9.7E-28 T 23-04-2016 LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 SMART SM00116 174 227 3.7 T 23-04-2016 IPR000644 CBS domain LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 SMART SM00116 238 286 0.013 T 23-04-2016 IPR000644 CBS domain LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 Gene3D G3DSA:1.10.357.20 307 481 6.8E-54 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 Gene3D G3DSA:3.10.580.10 158 290 2.2E-16 T 23-04-2016 LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 Pfam PF00571 CBS domain 167 223 9.7E-5 T 23-04-2016 IPR000644 CBS domain LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 Pfam PF00571 CBS domain 231 278 1.5E-5 T 23-04-2016 IPR000644 CBS domain LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 Pfam PF01769 Divalent cation transporter 351 475 2.5E-25 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 PANTHER PTHR11911:SF99 1 460 1.0E-39 T 23-04-2016 LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 SUPERFAMILY SSF161093 308 481 9.29E-48 T 23-04-2016 LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 Pfam PF03448 MgtE intracellular N domain 64 165 6.3E-25 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain LT40_RS01165 f3e0c2debe6616bfe871c668b3c3130e 482 SUPERFAMILY SSF158791 41 164 1.1E-27 T 23-04-2016 LT40_RS08980 73e6e0a7875bcff87c55b323468d6d60 219 SUPERFAMILY SSF48008 102 215 1.49E-8 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS08980 73e6e0a7875bcff87c55b323468d6d60 219 PANTHER PTHR11751:SF416 11 97 1.4E-15 T 23-04-2016 LT40_RS08980 73e6e0a7875bcff87c55b323468d6d60 219 PANTHER PTHR11751 11 97 1.4E-15 T 23-04-2016 LT40_RS08980 73e6e0a7875bcff87c55b323468d6d60 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 1.7E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS08980 73e6e0a7875bcff87c55b323468d6d60 219 Gene3D G3DSA:1.10.10.10 5 72 9.6E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08980 73e6e0a7875bcff87c55b323468d6d60 219 SUPERFAMILY SSF46785 5 75 4.8E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08980 73e6e0a7875bcff87c55b323468d6d60 219 Pfam PF07729 FCD domain 103 201 4.9E-8 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS08980 73e6e0a7875bcff87c55b323468d6d60 219 SMART SM00345 13 71 4.8E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS08980 73e6e0a7875bcff87c55b323468d6d60 219 Gene3D G3DSA:1.20.120.530 98 216 4.3E-10 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS17835 f14cf931e144d1e46987da57fe7f3873 609 SUPERFAMILY SSF53474 355 596 1.15E-59 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS17835 f14cf931e144d1e46987da57fe7f3873 609 SUPERFAMILY SSF82171 44 228 1.18E-9 T 23-04-2016 LT40_RS17835 f14cf931e144d1e46987da57fe7f3873 609 Pfam PF00326 Prolyl oligopeptidase family 393 600 7.8E-47 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 LT40_RS17835 f14cf931e144d1e46987da57fe7f3873 609 Gene3D G3DSA:3.40.50.1820 135 174 1.2E-69 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS17835 f14cf931e144d1e46987da57fe7f3873 609 Gene3D G3DSA:3.40.50.1820 312 598 1.2E-69 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS17835 f14cf931e144d1e46987da57fe7f3873 609 PANTHER PTHR11731 36 256 4.6E-123 T 23-04-2016 LT40_RS17835 f14cf931e144d1e46987da57fe7f3873 609 PANTHER PTHR11731 274 609 4.6E-123 T 23-04-2016 LT40_RS17835 f14cf931e144d1e46987da57fe7f3873 609 PANTHER PTHR11731:SF75 36 256 4.6E-123 T 23-04-2016 LT40_RS17835 f14cf931e144d1e46987da57fe7f3873 609 PANTHER PTHR11731:SF75 274 609 4.6E-123 T 23-04-2016 LT40_RS16845 bcfa88f158530a511072426142093a59 243 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS16845 bcfa88f158530a511072426142093a59 243 PIRSF PIRSF039085 1 241 6.5E-107 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS16845 bcfa88f158530a511072426142093a59 243 PANTHER PTHR24220:SF550 5 238 4.5E-127 T 23-04-2016 LT40_RS16845 bcfa88f158530a511072426142093a59 243 Pfam PF00005 ABC transporter 19 167 4.7E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS16845 bcfa88f158530a511072426142093a59 243 PANTHER PTHR24220 5 238 4.5E-127 T 23-04-2016 LT40_RS16845 bcfa88f158530a511072426142093a59 243 SMART SM00382 28 215 1.7E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS16845 bcfa88f158530a511072426142093a59 243 SUPERFAMILY SSF52540 3 236 1.94E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16845 bcfa88f158530a511072426142093a59 243 Gene3D G3DSA:3.40.50.300 1 238 7.3E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05410 f1418eb3bd0b90a002fcf187981652dd 565 Gene3D G3DSA:2.30.38.10 380 452 1.0E-27 T 23-04-2016 LT40_RS05410 f1418eb3bd0b90a002fcf187981652dd 565 PANTHER PTHR24096 177 554 1.5E-172 T 23-04-2016 LT40_RS05410 f1418eb3bd0b90a002fcf187981652dd 565 PANTHER PTHR24096 9 161 1.5E-172 T 23-04-2016 LT40_RS05410 f1418eb3bd0b90a002fcf187981652dd 565 Gene3D G3DSA:3.40.50.980 218 379 2.8E-41 T 23-04-2016 LT40_RS05410 f1418eb3bd0b90a002fcf187981652dd 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 545 6.2E-17 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LT40_RS05410 f1418eb3bd0b90a002fcf187981652dd 565 Pfam PF00501 AMP-binding enzyme 31 461 3.0E-109 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LT40_RS05410 f1418eb3bd0b90a002fcf187981652dd 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 23-04-2016 IPR020845 AMP-binding, conserved site LT40_RS05410 f1418eb3bd0b90a002fcf187981652dd 565 Gene3D G3DSA:3.30.300.30 458 557 1.4E-29 T 23-04-2016 LT40_RS05410 f1418eb3bd0b90a002fcf187981652dd 565 Gene3D G3DSA:3.40.50.980 26 153 1.1E-33 T 23-04-2016 LT40_RS05410 f1418eb3bd0b90a002fcf187981652dd 565 Gene3D G3DSA:3.40.50.980 186 217 1.1E-33 T 23-04-2016 LT40_RS05410 f1418eb3bd0b90a002fcf187981652dd 565 SUPERFAMILY SSF56801 19 557 3.14E-147 T 23-04-2016 LT40_RS00715 92b40fa22d39aa24bb033c817ee7871a 78 Gene3D G3DSA:1.10.1200.10 3 77 7.6E-36 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS00715 92b40fa22d39aa24bb033c817ee7871a 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 0.003 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LT40_RS00715 92b40fa22d39aa24bb033c817ee7871a 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.5E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS00715 92b40fa22d39aa24bb033c817ee7871a 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.944 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LT40_RS00715 92b40fa22d39aa24bb033c817ee7871a 78 SUPERFAMILY SSF47336 2 77 1.44E-24 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS00715 92b40fa22d39aa24bb033c817ee7871a 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site LT40_RS00715 92b40fa22d39aa24bb033c817ee7871a 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 8.2E-36 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 LT40_RS00715 92b40fa22d39aa24bb033c817ee7871a 78 PANTHER PTHR20863 4 73 8.7E-31 T 23-04-2016 LT40_RS08015 259113876e647ef7c3261c6b26e1cbf1 308 SUPERFAMILY SSF53613 1 303 1.37E-79 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS08015 259113876e647ef7c3261c6b26e1cbf1 308 PANTHER PTHR10584:SF184 1 303 3.4E-99 T 23-04-2016 LT40_RS08015 259113876e647ef7c3261c6b26e1cbf1 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 297 8.2E-102 T 23-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 LT40_RS08015 259113876e647ef7c3261c6b26e1cbf1 308 PRINTS PR00990 Ribokinase signature 105 118 3.9E-32 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LT40_RS08015 259113876e647ef7c3261c6b26e1cbf1 308 PRINTS PR00990 Ribokinase signature 218 229 3.9E-32 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LT40_RS08015 259113876e647ef7c3261c6b26e1cbf1 308 PRINTS PR00990 Ribokinase signature 174 189 3.9E-32 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LT40_RS08015 259113876e647ef7c3261c6b26e1cbf1 308 PRINTS PR00990 Ribokinase signature 6 27 3.9E-32 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LT40_RS08015 259113876e647ef7c3261c6b26e1cbf1 308 PRINTS PR00990 Ribokinase signature 33 52 3.9E-32 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LT40_RS08015 259113876e647ef7c3261c6b26e1cbf1 308 Gene3D G3DSA:3.40.1190.20 2 304 2.0E-87 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS08015 259113876e647ef7c3261c6b26e1cbf1 308 PANTHER PTHR10584 1 303 3.4E-99 T 23-04-2016 LT40_RS08015 259113876e647ef7c3261c6b26e1cbf1 308 Pfam PF00294 pfkB family carbohydrate kinase 1 295 1.7E-63 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB LT40_RS06475 70ffee872e9a5612ad31a781baaf04e3 725 SUPERFAMILY SSF56935 76 725 1.41E-123 T 23-04-2016 LT40_RS06475 70ffee872e9a5612ad31a781baaf04e3 725 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 708 725 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site LT40_RS06475 70ffee872e9a5612ad31a781baaf04e3 725 PANTHER PTHR32552:SF37 76 725 4.6E-207 T 23-04-2016 LT40_RS06475 70ffee872e9a5612ad31a781baaf04e3 725 PANTHER PTHR32552:SF37 1 46 4.6E-207 T 23-04-2016 LT40_RS06475 70ffee872e9a5612ad31a781baaf04e3 725 Pfam PF00593 TonB dependent receptor 479 724 1.9E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS06475 70ffee872e9a5612ad31a781baaf04e3 725 Gene3D G3DSA:2.40.170.20 202 725 1.4E-132 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS06475 70ffee872e9a5612ad31a781baaf04e3 725 Pfam PF07715 TonB-dependent Receptor Plug Domain 84 183 8.5E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS06475 70ffee872e9a5612ad31a781baaf04e3 725 Gene3D G3DSA:2.170.130.10 64 192 2.0E-34 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS06475 70ffee872e9a5612ad31a781baaf04e3 725 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 86 725 3.0E-107 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS06475 70ffee872e9a5612ad31a781baaf04e3 725 PANTHER PTHR32552 76 725 4.6E-207 T 23-04-2016 LT40_RS06475 70ffee872e9a5612ad31a781baaf04e3 725 PANTHER PTHR32552 1 46 4.6E-207 T 23-04-2016 LT40_RS00665 350c2cee436a9da22859e3f315a11397 1139 Pfam PF00575 S1 RNA binding domain 33 113 1.2E-14 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS00665 350c2cee436a9da22859e3f315a11397 1139 Hamap MF_00970 Ribonuclease E [rne]. 1 1103 34.652 T 23-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 LT40_RS00665 350c2cee436a9da22859e3f315a11397 1139 Pfam PF10150 Ribonuclease E/G family 116 385 1.7E-94 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 LT40_RS00665 350c2cee436a9da22859e3f315a11397 1139 PANTHER PTHR30001:SF1 1 822 0.0 T 23-04-2016 LT40_RS00665 350c2cee436a9da22859e3f315a11397 1139 PANTHER PTHR30001 1 822 0.0 T 23-04-2016 LT40_RS00665 350c2cee436a9da22859e3f315a11397 1139 Gene3D G3DSA:2.40.50.140 28 120 1.3E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS00665 350c2cee436a9da22859e3f315a11397 1139 SUPERFAMILY SSF50249 37 120 3.69E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS00665 350c2cee436a9da22859e3f315a11397 1139 SMART SM00316 34 114 5.9E-13 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS00665 350c2cee436a9da22859e3f315a11397 1139 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 419 6.5E-167 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 LT40_RS07015 7b0bfdee74598b97f23f3e2d07c82151 442 Gene3D G3DSA:1.20.1250.20 250 432 8.4E-21 T 23-04-2016 LT40_RS07015 7b0bfdee74598b97f23f3e2d07c82151 442 SUPERFAMILY SSF103473 6 437 2.62E-76 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS07015 7b0bfdee74598b97f23f3e2d07c82151 442 Gene3D G3DSA:1.20.1250.20 15 202 2.5E-23 T 23-04-2016 LT40_RS07015 7b0bfdee74598b97f23f3e2d07c82151 442 Pfam PF00083 Sugar (and other) transporter 53 437 4.5E-55 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS07015 7b0bfdee74598b97f23f3e2d07c82151 442 PANTHER PTHR23511 6 437 1.2E-81 T 23-04-2016 LT40_RS06600 fc635aa036887645dde82640a735df4c 300 Gene3D G3DSA:3.40.50.1100 44 143 3.2E-38 T 23-04-2016 LT40_RS06600 fc635aa036887645dde82640a735df4c 300 PANTHER PTHR10314 1 297 3.6E-181 T 23-04-2016 LT40_RS06600 fc635aa036887645dde82640a735df4c 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 LT40_RS06600 fc635aa036887645dde82640a735df4c 300 TIGRFAM TIGR01138 cysM: cysteine synthase B 7 296 4.1E-159 T 23-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 LT40_RS06600 fc635aa036887645dde82640a735df4c 300 Gene3D G3DSA:3.40.50.1100 3 43 6.3E-80 T 23-04-2016 LT40_RS06600 fc635aa036887645dde82640a735df4c 300 Gene3D G3DSA:3.40.50.1100 150 297 6.3E-80 T 23-04-2016 LT40_RS06600 fc635aa036887645dde82640a735df4c 300 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 296 3.4E-121 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 LT40_RS06600 fc635aa036887645dde82640a735df4c 300 SUPERFAMILY SSF53686 6 292 1.57E-87 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS06600 fc635aa036887645dde82640a735df4c 300 PANTHER PTHR10314:SF100 1 297 3.6E-181 T 23-04-2016 LT40_RS06600 fc635aa036887645dde82640a735df4c 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 285 4.9E-66 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS20055 f29c49135e74e1716b9cb1128c88982d 98 SUPERFAMILY SSF158757 1 77 6.93E-39 T 23-04-2016 IPR023163 SMc04008-like domain LT40_RS20055 f29c49135e74e1716b9cb1128c88982d 98 Pfam PF06844 Protein of unknown function (DUF1244) 27 92 4.2E-37 T 23-04-2016 IPR023163 SMc04008-like domain LT40_RS20055 f29c49135e74e1716b9cb1128c88982d 98 Gene3D G3DSA:1.10.3340.10 1 84 1.8E-44 T 23-04-2016 IPR023163 SMc04008-like domain LT40_RS08800 89806cb7b99182cbc537a86a1fd194c2 960 Pfam PF13550 Putative phage tail protein 343 503 2.0E-15 T 23-04-2016 IPR032876 Tip attachment protein J LT40_RS08800 89806cb7b99182cbc537a86a1fd194c2 960 PANTHER PTHR36251:SF2 1 886 0.0 T 23-04-2016 LT40_RS08800 89806cb7b99182cbc537a86a1fd194c2 960 PANTHER PTHR36251 1 886 0.0 T 23-04-2016 LT40_RS19285 27c79042cc9de2f01b2ecadbd977f104 478 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 9.2E-168 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LT40_RS19285 27c79042cc9de2f01b2ecadbd977f104 478 PANTHER PTHR30365 1 455 3.4E-282 T 23-04-2016 LT40_RS19285 27c79042cc9de2f01b2ecadbd977f104 478 PIRSF PIRSF006446 2 461 2.3E-227 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LT40_RS19285 27c79042cc9de2f01b2ecadbd977f104 478 PANTHER PTHR30365:SF8 1 455 3.4E-282 T 23-04-2016 LT40_RS11980 0d9118b17793c200ff7a0714e9a1c442 219 PANTHER PTHR30614 8 219 7.9E-68 T 23-04-2016 LT40_RS11980 0d9118b17793c200ff7a0714e9a1c442 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 111 2.4E-22 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS11980 0d9118b17793c200ff7a0714e9a1c442 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 212 2.3E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11980 0d9118b17793c200ff7a0714e9a1c442 219 Gene3D G3DSA:1.10.3720.10 11 217 9.4E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11980 0d9118b17793c200ff7a0714e9a1c442 219 SUPERFAMILY SSF161098 14 217 4.45E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Gene3D G3DSA:3.30.70.270 542 709 3.8E-59 T 23-04-2016 LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Gene3D G3DSA:3.30.450.20 406 524 1.1E-28 T 23-04-2016 LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SMART SM00267 530 702 4.3E-69 T 23-04-2016 IPR000160 GGDEF domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Pfam PF13426 PAS domain 305 407 8.7E-8 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Pfam PF13426 PAS domain 183 282 8.1E-10 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 537 700 9.4E-43 T 23-04-2016 IPR000160 GGDEF domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SUPERFAMILY SSF141868 717 968 1.05E-90 T 23-04-2016 IPR001633 EAL domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SUPERFAMILY SSF55785 421 528 2.74E-27 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SMART SM00052 712 958 1.9E-117 T 23-04-2016 IPR001633 EAL domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 41 165 1.5E-11 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 293 415 1.6E-15 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 169 290 1.6E-14 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 420 537 1.3E-18 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Pfam PF00563 EAL domain 719 953 4.6E-76 T 23-04-2016 IPR001633 EAL domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SUPERFAMILY SSF55785 156 281 2.09E-18 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Pfam PF00989 PAS fold 421 527 5.5E-14 T 23-04-2016 IPR013767 PAS fold GO:0006355 LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SUPERFAMILY SSF55785 280 406 1.35E-20 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Gene3D G3DSA:3.20.20.450 716 962 8.8E-101 T 23-04-2016 IPR001633 EAL domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SUPERFAMILY SSF55073 546 703 1.57E-50 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SMART SM00086 243 283 0.013 T 23-04-2016 IPR001610 PAC motif LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SMART SM00086 488 530 2.1E-4 T 23-04-2016 IPR001610 PAC motif LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SMART SM00086 368 408 0.013 T 23-04-2016 IPR001610 PAC motif LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SMART SM00086 119 159 3.5 T 23-04-2016 IPR001610 PAC motif LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SUPERFAMILY SSF55785 30 157 7.63E-19 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SMART SM00091 295 362 9.1E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SMART SM00091 171 238 0.68 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SMART SM00091 45 113 1.5E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 SMART SM00091 416 482 3.3E-5 T 23-04-2016 IPR000014 PAS domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 PANTHER PTHR33121 657 967 2.1E-86 T 23-04-2016 LT40_RS18005 eac650e74a808b945525d640bfa65269 981 PANTHER PTHR33121:SF13 657 967 2.1E-86 T 23-04-2016 LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Pfam PF00990 Diguanylate cyclase, GGDEF domain 541 698 8.1E-52 T 23-04-2016 IPR000160 GGDEF domain LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Gene3D G3DSA:3.30.450.20 30 156 3.4E-19 T 23-04-2016 LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Gene3D G3DSA:3.30.450.20 281 405 2.7E-21 T 23-04-2016 LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Gene3D G3DSA:3.30.450.20 157 280 6.8E-21 T 23-04-2016 LT40_RS18005 eac650e74a808b945525d640bfa65269 981 Pfam PF08447 PAS fold 70 143 2.5E-10 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 341 367 2.3E-46 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 183 211 2.3E-46 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 253 269 2.3E-46 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 159 172 2.3E-46 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 235 252 2.3E-46 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 PANTHER PTHR23429:SF0 6 498 1.3E-208 T 23-04-2016 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 18 203 9.9E-55 T 23-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 SUPERFAMILY SSF55347 193 499 3.92E-108 T 23-04-2016 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 Gene3D G3DSA:3.30.360.10 203 499 2.1E-115 T 23-04-2016 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 PANTHER PTHR23429 6 498 1.3E-208 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 13 500 74.172 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 206 499 7.9E-110 T 23-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 193 199 - T 23-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 PIRSF PIRSF000110 2 502 2.5E-160 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 14 500 3.5E-170 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 SUPERFAMILY SSF51735 8 206 5.71E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11025 edfb9c72dd21d64fb547bf88b85ebcb3 502 Gene3D G3DSA:3.40.50.720 13 202 1.5E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09100 63aa2ac5e3a8f8ecf8e9d9e716b85b23 322 PANTHER PTHR10859:SF86 1 321 1.8E-85 T 23-04-2016 LT40_RS09100 63aa2ac5e3a8f8ecf8e9d9e716b85b23 322 Gene3D G3DSA:3.90.550.10 6 135 1.5E-18 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09100 63aa2ac5e3a8f8ecf8e9d9e716b85b23 322 Pfam PF00535 Glycosyl transferase family 2 11 172 1.4E-22 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS09100 63aa2ac5e3a8f8ecf8e9d9e716b85b23 322 PANTHER PTHR10859 1 321 1.8E-85 T 23-04-2016 LT40_RS09100 63aa2ac5e3a8f8ecf8e9d9e716b85b23 322 SUPERFAMILY SSF53448 5 173 8.44E-28 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS00860 a2cdf25ebc0f5bc1f476f45b40224317 233 Gene3D G3DSA:3.40.50.300 1 229 2.3E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00860 a2cdf25ebc0f5bc1f476f45b40224317 233 SMART SM00382 26 210 2.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS00860 a2cdf25ebc0f5bc1f476f45b40224317 233 PIRSF PIRSF039137 1 233 5.5E-104 T 23-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 LT40_RS00860 a2cdf25ebc0f5bc1f476f45b40224317 233 PANTHER PTHR24220 3 232 9.6E-132 T 23-04-2016 LT40_RS00860 a2cdf25ebc0f5bc1f476f45b40224317 233 Pfam PF00005 ABC transporter 17 161 2.7E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS00860 a2cdf25ebc0f5bc1f476f45b40224317 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS00860 a2cdf25ebc0f5bc1f476f45b40224317 233 SUPERFAMILY SSF52540 2 231 1.07E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00860 a2cdf25ebc0f5bc1f476f45b40224317 233 PANTHER PTHR24220:SF568 3 232 9.6E-132 T 23-04-2016 LT40_RS08105 e9c731d20d2489b8a98d335126c28973 296 PIRSF PIRSF001365 1 296 2.7E-54 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08105 e9c731d20d2489b8a98d335126c28973 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 4.4E-9 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08105 e9c731d20d2489b8a98d335126c28973 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 4.4E-9 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08105 e9c731d20d2489b8a98d335126c28973 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 4.4E-9 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08105 e9c731d20d2489b8a98d335126c28973 296 Pfam PF00701 Dihydrodipicolinate synthetase family 2 291 1.1E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08105 e9c731d20d2489b8a98d335126c28973 296 PANTHER PTHR12128 1 295 3.8E-38 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08105 e9c731d20d2489b8a98d335126c28973 296 Gene3D G3DSA:3.20.20.70 1 295 1.2E-82 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS08105 e9c731d20d2489b8a98d335126c28973 296 SUPERFAMILY SSF51569 1 293 7.22E-62 T 23-04-2016 LT40_RS08105 e9c731d20d2489b8a98d335126c28973 296 SMART SM01130 1 294 7.7E-57 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08105 e9c731d20d2489b8a98d335126c28973 296 PANTHER PTHR12128:SF34 1 295 3.8E-38 T 23-04-2016 LT40_RS10400 59593c95f6223dfcd354ebf56653177c 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 140 316 1.1E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10400 59593c95f6223dfcd354ebf56653177c 321 SUPERFAMILY SSF161098 117 302 1.57E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10400 59593c95f6223dfcd354ebf56653177c 321 PANTHER PTHR30614 116 321 2.3E-80 T 23-04-2016 LT40_RS10400 59593c95f6223dfcd354ebf56653177c 321 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 116 211 2.3E-25 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS10400 59593c95f6223dfcd354ebf56653177c 321 Gene3D G3DSA:1.10.3720.10 117 318 1.5E-50 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05205 52d9022586a50c6459afc33ab8f0a5fc 75 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 66 1.0E-25 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 LT40_RS05205 52d9022586a50c6459afc33ab8f0a5fc 75 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 69 22.401 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 LT40_RS05205 52d9022586a50c6459afc33ab8f0a5fc 75 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 67 1.5E-25 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 LT40_RS05205 52d9022586a50c6459afc33ab8f0a5fc 75 Gene3D G3DSA:1.10.10.610 1 71 3.4E-28 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 LT40_RS05205 52d9022586a50c6459afc33ab8f0a5fc 75 SUPERFAMILY SSF118001 1 72 3.4E-25 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 LT40_RS05205 52d9022586a50c6459afc33ab8f0a5fc 75 PIRSF PIRSF006169 1 75 3.0E-28 T 23-04-2016 IPR010648 Uncharacterised protein family UPF0270 LT40_RS04310 d649c6af1c460ad4acf9aab0002cd5ff 490 Pfam PF05872 Bacterial protein of unknown function (DUF853) 10 489 1.1E-209 T 23-04-2016 IPR033186 Helicase HerA-like C-terminal LT40_RS04310 d649c6af1c460ad4acf9aab0002cd5ff 490 PANTHER PTHR30121 17 445 2.6E-160 T 23-04-2016 LT40_RS04310 d649c6af1c460ad4acf9aab0002cd5ff 490 PANTHER PTHR30121:SF3 17 445 2.6E-160 T 23-04-2016 LT40_RS04310 d649c6af1c460ad4acf9aab0002cd5ff 490 SMART SM00382 25 331 5.5E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS04310 d649c6af1c460ad4acf9aab0002cd5ff 490 Gene3D G3DSA:3.40.50.300 216 382 1.5E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04310 d649c6af1c460ad4acf9aab0002cd5ff 490 Gene3D G3DSA:3.40.50.300 8 111 1.5E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04310 d649c6af1c460ad4acf9aab0002cd5ff 490 SUPERFAMILY SSF52540 5 382 1.45E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04310 d649c6af1c460ad4acf9aab0002cd5ff 490 Gene3D G3DSA:1.10.238.10 128 169 8.6E-4 T 23-04-2016 IPR011992 EF-hand domain pair LT40_RS04310 d649c6af1c460ad4acf9aab0002cd5ff 490 Gene3D G3DSA:1.10.238.10 206 215 8.6E-4 T 23-04-2016 IPR011992 EF-hand domain pair LT40_RS18425 786c2680e12b75a7598eb3c89b30cae9 130 PANTHER PTHR11758 1 130 4.2E-60 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LT40_RS18425 786c2680e12b75a7598eb3c89b30cae9 130 SUPERFAMILY SSF56047 2 130 2.49E-46 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LT40_RS18425 786c2680e12b75a7598eb3c89b30cae9 130 Gene3D G3DSA:3.30.1370.30 2 71 6.8E-28 T 23-04-2016 LT40_RS18425 786c2680e12b75a7598eb3c89b30cae9 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.705 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LT40_RS18425 786c2680e12b75a7598eb3c89b30cae9 130 Pfam PF00410 Ribosomal protein S8 5 130 8.9E-49 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LT40_RS18425 786c2680e12b75a7598eb3c89b30cae9 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 LT40_RS18425 786c2680e12b75a7598eb3c89b30cae9 130 Gene3D G3DSA:3.30.1490.10 74 130 5.3E-27 T 23-04-2016 LT40_RS18565 dfac6bb4c71839639f84bb55ee96debd 159 PANTHER PTHR30455 7 159 1.2E-71 T 23-04-2016 LT40_RS18565 dfac6bb4c71839639f84bb55ee96debd 159 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 158 81.04 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 LT40_RS18565 dfac6bb4c71839639f84bb55ee96debd 159 PANTHER PTHR30455:SF2 7 159 1.2E-71 T 23-04-2016 LT40_RS18565 dfac6bb4c71839639f84bb55ee96debd 159 Pfam PF03477 ATP cone domain 57 141 1.7E-12 T 23-04-2016 IPR005144 ATP-cone domain LT40_RS18565 dfac6bb4c71839639f84bb55ee96debd 159 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 6 152 1.9E-70 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 PRINTS PR01183 Ribonucleotide reductase large chain signature 581 592 9.4E-47 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 PRINTS PR01183 Ribonucleotide reductase large chain signature 684 707 9.4E-47 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 PRINTS PR01183 Ribonucleotide reductase large chain signature 760 787 9.4E-47 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 PRINTS PR01183 Ribonucleotide reductase large chain signature 618 641 9.4E-47 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 PRINTS PR01183 Ribonucleotide reductase large chain signature 446 465 9.4E-47 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 PRINTS PR01183 Ribonucleotide reductase large chain signature 656 678 9.4E-47 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 SUPERFAMILY SSF51998 840 907 3.97E-182 T 23-04-2016 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 SUPERFAMILY SSF51998 370 809 3.97E-182 T 23-04-2016 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 PANTHER PTHR11573 150 961 0.0 T 23-04-2016 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 Pfam PF02867 Ribonucleotide reductase, barrel domain 371 905 1.1E-182 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 294 365 1.6E-22 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 750 771 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 Pfam PF03477 ATP cone domain 33 129 9.3E-18 T 23-04-2016 IPR005144 ATP-cone domain LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 Pfam PF03477 ATP cone domain 148 233 4.1E-6 T 23-04-2016 IPR005144 ATP-cone domain LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 PANTHER PTHR11573:SF6 150 961 0.0 T 23-04-2016 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 SUPERFAMILY SSF48168 154 369 7.98E-61 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 297 907 2.7E-216 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 Gene3D G3DSA:3.20.70.20 282 492 3.9E-82 T 23-04-2016 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 Gene3D G3DSA:3.20.70.20 866 907 3.9E-82 T 23-04-2016 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 Gene3D G3DSA:3.20.70.20 547 704 3.9E-82 T 23-04-2016 LT40_RS04700 ef5b0ddf9c50489f68f4603d57e05b2a 961 Gene3D G3DSA:3.20.70.20 760 805 3.9E-82 T 23-04-2016 LT40_RS00720 fccaba9a026952a8c930f63966449aa9 414 Gene3D G3DSA:3.40.47.10 3 260 3.0E-77 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS00720 fccaba9a026952a8c930f63966449aa9 414 SUPERFAMILY SSF53901 4 252 1.95E-78 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS00720 fccaba9a026952a8c930f63966449aa9 414 PIRSF PIRSF000447 1 414 4.1E-191 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 LT40_RS00720 fccaba9a026952a8c930f63966449aa9 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 2.1E-196 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 LT40_RS00720 fccaba9a026952a8c930f63966449aa9 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 2.6E-39 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal LT40_RS00720 fccaba9a026952a8c930f63966449aa9 414 SMART SM00825 Beta-ketoacyl synthase 6 414 3.1E-16 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LT40_RS00720 fccaba9a026952a8c930f63966449aa9 414 PANTHER PTHR11712 3 412 5.1E-216 T 23-04-2016 LT40_RS00720 fccaba9a026952a8c930f63966449aa9 414 SUPERFAMILY SSF53901 215 412 6.63E-74 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS00720 fccaba9a026952a8c930f63966449aa9 414 Gene3D G3DSA:3.40.47.10 264 412 1.1E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS00720 fccaba9a026952a8c930f63966449aa9 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site LT40_RS00720 fccaba9a026952a8c930f63966449aa9 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 5.6E-60 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal LT40_RS02175 3bbc248a3b8f61f4ffaf648beca3f031 243 Pfam PF00929 Exonuclease 6 169 2.3E-35 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS02175 3bbc248a3b8f61f4ffaf648beca3f031 243 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 4 239 8.0E-86 T 23-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS02175 3bbc248a3b8f61f4ffaf648beca3f031 243 PANTHER PTHR30231 4 238 5.0E-105 T 23-04-2016 LT40_RS02175 3bbc248a3b8f61f4ffaf648beca3f031 243 Gene3D G3DSA:3.30.420.10 4 179 1.8E-62 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS02175 3bbc248a3b8f61f4ffaf648beca3f031 243 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 219 6.8E-63 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS02175 3bbc248a3b8f61f4ffaf648beca3f031 243 SUPERFAMILY SSF53098 3 179 3.27E-54 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS02175 3bbc248a3b8f61f4ffaf648beca3f031 243 SMART SM00479 4 178 2.8E-43 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS02175 3bbc248a3b8f61f4ffaf648beca3f031 243 PANTHER PTHR30231:SF0 4 238 5.0E-105 T 23-04-2016 LT40_RS15625 796af0e6cd8a838f8086ed40be60d249 413 PIRSF PIRSF036542 1 409 2.5E-208 T 23-04-2016 IPR011415 Predicted bifunctional spore maturation protein, fused SpmA/SpmB LT40_RS15625 796af0e6cd8a838f8086ed40be60d249 413 PANTHER PTHR35793:SF2 2 409 8.3E-255 T 23-04-2016 LT40_RS15625 796af0e6cd8a838f8086ed40be60d249 413 PANTHER PTHR35793 2 409 8.3E-255 T 23-04-2016 LT40_RS15625 796af0e6cd8a838f8086ed40be60d249 413 Pfam PF07670 Nucleoside recognition 52 156 4.2E-8 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 LT40_RS04315 1b7aebb9886dd273c3f5f21189f73ffc 490 Pfam PF01384 Phosphate transporter family 30 478 1.3E-81 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 LT40_RS04315 1b7aebb9886dd273c3f5f21189f73ffc 490 PANTHER PTHR11101 2 485 6.0E-189 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 LT40_RS04315 1b7aebb9886dd273c3f5f21189f73ffc 490 PANTHER PTHR11101:SF59 2 485 6.0E-189 T 23-04-2016 LT40_RS17425 cda33fb99fe12229f1764a9090896161 197 PANTHER PTHR30055 1 195 3.9E-110 T 23-04-2016 LT40_RS17425 cda33fb99fe12229f1764a9090896161 197 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 197 108.317 T 23-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 LT40_RS17425 cda33fb99fe12229f1764a9090896161 197 SUPERFAMILY SSF46689 5 79 1.64E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS17425 cda33fb99fe12229f1764a9090896161 197 SUPERFAMILY SSF48498 82 193 8.9E-19 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LT40_RS17425 cda33fb99fe12229f1764a9090896161 197 Gene3D G3DSA:1.10.357.10 1 193 8.4E-44 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS17425 cda33fb99fe12229f1764a9090896161 197 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 9.8E-76 T 23-04-2016 IPR017757 Transcriptional repressor BetI UniPathway: UPA00529 LT40_RS17425 cda33fb99fe12229f1764a9090896161 197 Pfam PF13977 Bacterial transcriptional repressor 84 192 3.0E-31 T 23-04-2016 LT40_RS17425 cda33fb99fe12229f1764a9090896161 197 PANTHER PTHR30055:SF61 1 195 3.9E-110 T 23-04-2016 LT40_RS17425 cda33fb99fe12229f1764a9090896161 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 5.3E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS17425 cda33fb99fe12229f1764a9090896161 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LT40_RS03850 f36d8101f9a85082a8befafbef5065a0 421 Gene3D G3DSA:3.65.10.10 21 221 3.7E-63 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LT40_RS03850 f36d8101f9a85082a8befafbef5065a0 421 PANTHER PTHR21090 1 421 5.6E-199 T 23-04-2016 LT40_RS03850 f36d8101f9a85082a8befafbef5065a0 421 SUPERFAMILY SSF55205 1 419 1.96E-138 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 LT40_RS03850 f36d8101f9a85082a8befafbef5065a0 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 3.3E-119 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LT40_RS03850 f36d8101f9a85082a8befafbef5065a0 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 47.325 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS03850 f36d8101f9a85082a8befafbef5065a0 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 1.9E-176 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS03850 f36d8101f9a85082a8befafbef5065a0 421 Gene3D G3DSA:3.65.10.10 222 418 1.4E-58 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LT40_RS13420 85817b2bd869a73fc4eb0241f116ca61 123 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 15 123 7.9E-35 T 23-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 LT40_RS13420 85817b2bd869a73fc4eb0241f116ca61 123 PIRSF PIRSF037511 1 123 7.6E-48 T 23-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 LT40_RS13420 85817b2bd869a73fc4eb0241f116ca61 123 Gene3D G3DSA:3.30.780.10 44 123 4.8E-31 T 23-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 LT40_RS13420 85817b2bd869a73fc4eb0241f116ca61 123 Pfam PF01253 Translation initiation factor SUI1 49 117 7.6E-15 T 23-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 LT40_RS13420 85817b2bd869a73fc4eb0241f116ca61 123 PANTHER PTHR12789 40 123 2.9E-25 T 23-04-2016 LT40_RS13420 85817b2bd869a73fc4eb0241f116ca61 123 SUPERFAMILY SSF55159 13 119 7.32E-27 T 23-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 PANTHER PTHR24093 70 755 3.5E-260 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 SUPERFAMILY SSF81665 211 264 2.35E-14 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 SUPERFAMILY SSF81665 362 453 2.35E-14 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 210 761 1.9E-176 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 464 470 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 Gene3D G3DSA:2.70.150.10 210 362 1.3E-23 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 SUPERFAMILY SSF56784 516 758 4.95E-55 T 23-04-2016 IPR023214 HAD-like domain LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 SUPERFAMILY SSF56784 461 480 4.95E-55 T 23-04-2016 IPR023214 HAD-like domain LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 PANTHER PTHR24093:SF317 70 755 3.5E-260 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 232 744 3.0E-80 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 Pfam PF00122 E1-E2 ATPase 231 453 1.1E-64 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 PRINTS PR00941 Cadmium-transporting ATPase signature 327 343 3.3E-8 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 PRINTS PR00941 Cadmium-transporting ATPase signature 245 265 3.3E-8 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 PRINTS PR00941 Cadmium-transporting ATPase signature 346 360 3.3E-8 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 PRINTS PR00941 Cadmium-transporting ATPase signature 74 83 3.3E-8 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 Pfam PF00702 haloacid dehalogenase-like hydrolase 460 671 9.7E-44 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 SUPERFAMILY SSF81653 263 361 4.97E-22 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 SUPERFAMILY SSF55008 70 138 1.54E-10 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 Gene3D G3DSA:3.40.50.1000 438 477 1.5E-45 T 23-04-2016 IPR023214 HAD-like domain LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 Gene3D G3DSA:3.40.50.1000 586 727 1.5E-45 T 23-04-2016 IPR023214 HAD-like domain LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 Gene3D G3DSA:3.30.70.100 73 136 2.4E-7 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 Gene3D G3DSA:3.40.1110.10 478 585 1.5E-13 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 658 677 1.2E-24 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 694 1.2E-24 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 615 1.2E-24 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 476 1.2E-24 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 1.2E-24 T 23-04-2016 LT40_RS14760 faa441a8254c42e6b09a4ca56f63ce1e 764 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 193 761 2.7E-122 T 23-04-2016 LT40_RS11825 678582bfe90873c6cc4b6e5475feaf44 287 PANTHER PTHR30465:SF10 4 287 1.5E-85 T 23-04-2016 LT40_RS11825 678582bfe90873c6cc4b6e5475feaf44 287 SUPERFAMILY SSF161098 81 268 5.63E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11825 678582bfe90873c6cc4b6e5475feaf44 287 PANTHER PTHR30465 4 287 1.5E-85 T 23-04-2016 LT40_RS11825 678582bfe90873c6cc4b6e5475feaf44 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 283 3.3E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11825 678582bfe90873c6cc4b6e5475feaf44 287 Gene3D G3DSA:1.10.3720.10 79 283 5.7E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11760 2b337823931b3d3e858e5a0865cd9970 425 Pfam PF00817 impB/mucB/samB family 11 153 5.2E-33 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS11760 2b337823931b3d3e858e5a0865cd9970 425 PANTHER PTHR11076:SF40 8 423 1.3E-150 T 23-04-2016 LT40_RS11760 2b337823931b3d3e858e5a0865cd9970 425 Pfam PF13438 Domain of unknown function (DUF4113) 373 423 2.5E-18 T 23-04-2016 IPR025188 Domain of unknown function DUF4113 LT40_RS11760 2b337823931b3d3e858e5a0865cd9970 425 SUPERFAMILY SSF56672 7 240 3.47E-64 T 23-04-2016 LT40_RS11760 2b337823931b3d3e858e5a0865cd9970 425 Gene3D G3DSA:1.10.150.20 175 241 1.7E-15 T 23-04-2016 LT40_RS11760 2b337823931b3d3e858e5a0865cd9970 425 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 354 2.6E-8 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS11760 2b337823931b3d3e858e5a0865cd9970 425 Gene3D G3DSA:3.30.70.270 72 159 4.9E-22 T 23-04-2016 LT40_RS11760 2b337823931b3d3e858e5a0865cd9970 425 PANTHER PTHR11076 8 423 1.3E-150 T 23-04-2016 LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 Pfam PF00005 ABC transporter 306 460 7.3E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 Pfam PF00005 ABC transporter 22 179 6.8E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 512 539 5.8E-7 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 262 1.6E-6 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 PANTHER PTHR24220 305 420 1.1E-125 T 23-04-2016 LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 PANTHER PTHR24220 7 283 1.1E-125 T 23-04-2016 LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 SMART SM00382 30 228 3.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 SMART SM00382 314 510 7.7E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 PANTHER PTHR24220:SF486 305 420 1.1E-125 T 23-04-2016 LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 PANTHER PTHR24220:SF486 7 283 1.1E-125 T 23-04-2016 LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 SUPERFAMILY SSF52540 5 257 3.59E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 Gene3D G3DSA:3.40.50.300 3 256 1.6E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 SUPERFAMILY SSF52540 285 532 1.87E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11820 2f137fd3a663a4ef60526bfbf53d4365 570 Gene3D G3DSA:3.40.50.300 284 534 6.3E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12675 8e1c7a83efea5f72e942ee4151f24826 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 335 436 2.3E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS12675 8e1c7a83efea5f72e942ee4151f24826 438 PANTHER PTHR24423 30 61 9.1E-69 T 23-04-2016 LT40_RS12675 8e1c7a83efea5f72e942ee4151f24826 438 PANTHER PTHR24423:SF543 30 61 9.1E-69 T 23-04-2016 LT40_RS12675 8e1c7a83efea5f72e942ee4151f24826 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 3.2E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS12675 8e1c7a83efea5f72e942ee4151f24826 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 3.2E-5 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS12675 8e1c7a83efea5f72e942ee4151f24826 438 Gene3D G3DSA:3.30.565.10 313 434 7.6E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS12675 8e1c7a83efea5f72e942ee4151f24826 438 SUPERFAMILY SSF55874 307 434 1.26E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS12675 8e1c7a83efea5f72e942ee4151f24826 438 PANTHER PTHR24423 171 434 9.1E-69 T 23-04-2016 LT40_RS12675 8e1c7a83efea5f72e942ee4151f24826 438 PANTHER PTHR24423:SF543 171 434 9.1E-69 T 23-04-2016 LT40_RS12675 8e1c7a83efea5f72e942ee4151f24826 438 SMART SM00387 332 438 2.4E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16235 0f541433dbb684ca6205bd967360d31a 584 PANTHER PTHR16254 557 575 4.7E-105 T 23-04-2016 LT40_RS16235 0f541433dbb684ca6205bd967360d31a 584 PANTHER PTHR16254 6 389 4.7E-105 T 23-04-2016 LT40_RS16235 0f541433dbb684ca6205bd967360d31a 584 Pfam PF00999 Sodium/hydrogen exchanger family 12 375 5.7E-63 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LT40_RS14065 a739d8a0b4248e96a0fb131feeae6198 737 SUPERFAMILY SSF56935 36 737 1.21E-122 T 23-04-2016 LT40_RS14065 a739d8a0b4248e96a0fb131feeae6198 737 Pfam PF00593 TonB dependent receptor 477 733 3.3E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS14065 a739d8a0b4248e96a0fb131feeae6198 737 PANTHER PTHR32552:SF33 5 737 4.3E-94 T 23-04-2016 LT40_RS14065 a739d8a0b4248e96a0fb131feeae6198 737 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 163 7.8E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS14065 a739d8a0b4248e96a0fb131feeae6198 737 Gene3D G3DSA:2.170.130.10 33 172 7.2E-35 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS14065 a739d8a0b4248e96a0fb131feeae6198 737 Gene3D G3DSA:2.40.170.20 173 737 1.6E-94 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS14065 a739d8a0b4248e96a0fb131feeae6198 737 PANTHER PTHR32552 5 737 4.3E-94 T 23-04-2016 LT40_RS15445 479c25f6914ac3e6854904945349b837 295 PANTHER PTHR33281 23 285 4.5E-59 T 23-04-2016 LT40_RS15445 479c25f6914ac3e6854904945349b837 295 PANTHER PTHR33281:SF3 23 285 4.5E-59 T 23-04-2016 LT40_RS15445 479c25f6914ac3e6854904945349b837 295 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 46 283 8.0E-33 T 23-04-2016 IPR021134 Bestrophin/UPF0187 LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 PANTHER PTHR11908 162 316 4.8E-107 T 23-04-2016 LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 PANTHER PTHR11908 1 119 4.8E-107 T 23-04-2016 LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 Gene3D G3DSA:3.30.390.50 224 314 3.2E-19 T 23-04-2016 LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 SUPERFAMILY SSF56176 1 220 3.38E-55 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 SMART SM01092 226 314 5.5E-14 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 Gene3D G3DSA:3.30.43.10 1 51 9.4E-20 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 SUPERFAMILY SSF55447 223 314 6.41E-17 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 221 2.2E-49 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 Gene3D G3DSA:3.30.465.10 63 113 3.4E-30 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 Gene3D G3DSA:3.30.465.10 157 220 3.4E-30 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 228 299 8.7E-5 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 PANTHER PTHR11908:SF97 162 316 4.8E-107 T 23-04-2016 LT40_RS07920 9be291bd517c682edea19429b127d6f8 316 PANTHER PTHR11908:SF97 1 119 4.8E-107 T 23-04-2016 LT40_RS07890 fc70b4fed3a39109fb9288d31959c18b 131 PANTHER PTHR11803 12 129 7.6E-66 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS07890 fc70b4fed3a39109fb9288d31959c18b 131 Gene3D G3DSA:3.30.1330.40 9 129 1.4E-40 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS07890 fc70b4fed3a39109fb9288d31959c18b 131 Pfam PF01042 Endoribonuclease L-PSP 13 127 5.3E-28 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS07890 fc70b4fed3a39109fb9288d31959c18b 131 PANTHER PTHR11803:SF6 12 129 7.6E-66 T 23-04-2016 LT40_RS07890 fc70b4fed3a39109fb9288d31959c18b 131 SUPERFAMILY SSF55298 8 129 5.97E-36 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 SMART SM00382 40 239 1.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 SMART SM00382 306 498 7.4E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 ProSitePatterns PS00221 MIP family signature. 109 117 - T 23-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 SUPERFAMILY SSF52540 281 520 2.92E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 Gene3D G3DSA:3.40.50.300 11 263 2.8E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 PANTHER PTHR24220:SF574 14 406 1.2E-105 T 23-04-2016 LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 Pfam PF00005 ABC transporter 297 449 3.9E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 Pfam PF00005 ABC transporter 32 189 2.1E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 ProSitePatterns PS00211 ABC transporters family signature. 421 435 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 PANTHER PTHR24220 14 406 1.2E-105 T 23-04-2016 LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 Gene3D G3DSA:3.40.50.300 277 527 4.6E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10555 b9186795a852b429b7c1c652f942e8e2 537 SUPERFAMILY SSF52540 11 261 5.98E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09175 21215a2851823dd8978cd839c176a51f 616 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 13 556 1.4E-223 T 23-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 LT40_RS09175 21215a2851823dd8978cd839c176a51f 616 Pfam PF00664 ABC transporter transmembrane region 23 275 1.1E-11 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS09175 21215a2851823dd8978cd839c176a51f 616 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS09175 21215a2851823dd8978cd839c176a51f 616 PANTHER PTHR24222:SF0 8 583 3.5E-241 T 23-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 LT40_RS09175 21215a2851823dd8978cd839c176a51f 616 Gene3D G3DSA:3.40.50.300 329 555 3.3E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09175 21215a2851823dd8978cd839c176a51f 616 Pfam PF00005 ABC transporter 348 494 6.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS09175 21215a2851823dd8978cd839c176a51f 616 SUPERFAMILY SSF52540 319 554 5.23E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09175 21215a2851823dd8978cd839c176a51f 616 SMART SM00382 356 542 2.5E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS09175 21215a2851823dd8978cd839c176a51f 616 SUPERFAMILY SSF90123 12 322 4.05E-40 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS09175 21215a2851823dd8978cd839c176a51f 616 PANTHER PTHR24222 8 583 3.5E-241 T 23-04-2016 LT40_RS09175 21215a2851823dd8978cd839c176a51f 616 Gene3D G3DSA:1.20.1560.10 13 318 9.3E-35 T 23-04-2016 LT40_RS07725 8c8981290dc47664bd4ee6b3535cea5c 396 SUPERFAMILY SSF89796 2 395 5.49E-131 T 23-04-2016 IPR023606 CoA-transferase family III domain LT40_RS07725 8c8981290dc47664bd4ee6b3535cea5c 396 Gene3D G3DSA:3.30.1540.10 221 304 4.9E-27 T 23-04-2016 LT40_RS07725 8c8981290dc47664bd4ee6b3535cea5c 396 Pfam PF02515 CoA-transferase family III 4 372 4.5E-121 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 LT40_RS07725 8c8981290dc47664bd4ee6b3535cea5c 396 PANTHER PTHR24023 71 382 5.2E-37 T 23-04-2016 LT40_RS07725 8c8981290dc47664bd4ee6b3535cea5c 396 Gene3D G3DSA:3.40.50.10540 3 215 7.6E-104 T 23-04-2016 IPR023606 CoA-transferase family III domain LT40_RS07725 8c8981290dc47664bd4ee6b3535cea5c 396 Gene3D G3DSA:3.40.50.10540 305 395 7.6E-104 T 23-04-2016 IPR023606 CoA-transferase family III domain LT40_RS07725 8c8981290dc47664bd4ee6b3535cea5c 396 PANTHER PTHR24023:SF593 71 382 5.2E-37 T 23-04-2016 LT40_RS15605 f4d161ed3d086bee09544c84e26355c7 435 PANTHER PTHR10283:SF87 49 429 1.7E-193 T 23-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 LT40_RS15605 f4d161ed3d086bee09544c84e26355c7 435 PANTHER PTHR10283 49 429 1.7E-193 T 23-04-2016 LT40_RS15605 f4d161ed3d086bee09544c84e26355c7 435 TIGRFAM TIGR00784 citMHS: citrate transporter 1 429 1.2E-188 T 23-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 LT40_RS15605 f4d161ed3d086bee09544c84e26355c7 435 Pfam PF03600 Citrate transporter 13 377 2.3E-51 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 LT40_RS14910 23d4aebc2a6e9a1cdb847eb2d27f15f3 90 PANTHER PTHR36965 2 90 1.8E-46 T 23-04-2016 LT40_RS14910 23d4aebc2a6e9a1cdb847eb2d27f15f3 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 5.0E-39 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LT40_RS14910 23d4aebc2a6e9a1cdb847eb2d27f15f3 90 PANTHER PTHR36965:SF1 2 90 1.8E-46 T 23-04-2016 LT40_RS14910 23d4aebc2a6e9a1cdb847eb2d27f15f3 90 PIRSF PIRSF029827 1 90 1.2E-38 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LT40_RS14910 23d4aebc2a6e9a1cdb847eb2d27f15f3 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 26.715 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LT40_RS14910 23d4aebc2a6e9a1cdb847eb2d27f15f3 90 Gene3D G3DSA:1.10.3880.10 1 89 9.3E-39 T 23-04-2016 LT40_RS14910 23d4aebc2a6e9a1cdb847eb2d27f15f3 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 74 3.0E-36 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LT40_RS14910 23d4aebc2a6e9a1cdb847eb2d27f15f3 90 SUPERFAMILY SSF111148 1 89 1.14E-38 T 23-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 LT40_RS01580 74796232db496db564d65eaa2f8a0d46 260 SUPERFAMILY SSF53213 5 259 1.96E-88 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LT40_RS01580 74796232db496db564d65eaa2f8a0d46 260 PANTHER PTHR30096 4 260 4.8E-96 T 23-04-2016 LT40_RS01580 74796232db496db564d65eaa2f8a0d46 260 Gene3D G3DSA:3.40.830.10 4 259 1.7E-95 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LT40_RS01580 74796232db496db564d65eaa2f8a0d46 260 PIRSF PIRSF006157 1 260 1.1E-85 T 23-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 LT40_RS01580 74796232db496db564d65eaa2f8a0d46 260 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 259 1.5E-49 T 23-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 LT40_RS01580 74796232db496db564d65eaa2f8a0d46 260 PANTHER PTHR30096:SF0 4 260 4.8E-96 T 23-04-2016 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 Gene3D G3DSA:1.10.287.130 204 273 1.8E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 422 2.7E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 SUPERFAMILY SSF55874 279 421 1.57E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 SMART SM00388 211 277 3.4E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 Gene3D G3DSA:3.30.565.10 285 423 5.1E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 SMART SM00304 156 210 5.7E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 PANTHER PTHR24423 2 13 8.0E-54 T 23-04-2016 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 PANTHER PTHR24423 150 421 8.0E-54 T 23-04-2016 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 Pfam PF00672 HAMP domain 137 207 1.2E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 2.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 2.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 2.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.9E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 SMART SM00387 321 425 4.0E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 275 5.2E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04170 33454abaf0fe8dd29978f5203602fb51 429 SUPERFAMILY SSF47384 194 276 2.35E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08715 356e9d924c3491a89e919994fc987472 562 PANTHER PTHR41287 22 561 2.2E-31 T 23-04-2016 LT40_RS08715 356e9d924c3491a89e919994fc987472 562 Pfam PF03354 Phage Terminase 65 539 1.7E-22 T 23-04-2016 IPR005021 Phage terminase LT40_RS13635 8adfd7625b57e547c25b23ee61ece550 166 SUPERFAMILY SSF69737 71 138 2.35E-21 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 LT40_RS13635 8adfd7625b57e547c25b23ee61ece550 166 Gene3D G3DSA:3.30.70.790 72 143 8.4E-31 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 LT40_RS13635 8adfd7625b57e547c25b23ee61ece550 166 SUPERFAMILY SSF69287 1 71 1.57E-17 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal LT40_RS13635 8adfd7625b57e547c25b23ee61ece550 166 SMART SM00988 1 65 6.6E-24 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal LT40_RS13635 8adfd7625b57e547c25b23ee61ece550 166 Pfam PF02814 UreE urease accessory protein, N-terminal domain 7 65 4.5E-20 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal LT40_RS13635 8adfd7625b57e547c25b23ee61ece550 166 Gene3D G3DSA:2.60.260.20 1 69 2.1E-16 T 23-04-2016 LT40_RS13635 8adfd7625b57e547c25b23ee61ece550 166 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 139 22.892 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 LT40_RS13635 8adfd7625b57e547c25b23ee61ece550 166 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 149 8.4E-27 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 LT40_RS13635 8adfd7625b57e547c25b23ee61ece550 166 PIRSF PIRSF036402 2 150 2.7E-47 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 LT40_RS18760 7983f4b18258682eaec673b6c6f18b0a 121 PANTHER PTHR33931:SF2 1 115 7.6E-36 T 23-04-2016 LT40_RS18760 7983f4b18258682eaec673b6c6f18b0a 121 PANTHER PTHR33931 1 115 7.6E-36 T 23-04-2016 LT40_RS18760 7983f4b18258682eaec673b6c6f18b0a 121 Pfam PF03788 LrgA family 13 106 7.8E-21 T 23-04-2016 IPR005538 LrgA/CidA family GO:0016021 LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 PANTHER PTHR11918 1 444 4.5E-237 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 10 444 60.713 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 SMART SM00729 143 369 3.1E-51 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 PANTHER PTHR11918:SF57 1 444 4.5E-237 T 23-04-2016 LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 SUPERFAMILY SSF102114 114 374 3.14E-52 T 23-04-2016 LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 11 441 2.1E-172 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 Gene3D G3DSA:3.80.30.20 141 381 3.7E-70 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 Gene3D G3DSA:2.40.50.140 384 444 1.1E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 11 442 2.2E-101 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 Pfam PF00919 Uncharacterized protein family UPF0004 11 99 9.6E-21 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 LT40_RS00640 c9c11a27ca9d1d223befc56e69bfb7f0 445 Pfam PF04055 Radical SAM superfamily 149 326 1.1E-28 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 96 322 5.3E-35 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 Pfam PF00140 Sigma-70 factor, region 1.2 61 90 7.3E-10 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 Gene3D G3DSA:1.10.10.10 262 328 2.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 Gene3D G3DSA:1.10.601.10 39 168 6.8E-57 T 23-04-2016 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 PANTHER PTHR30603:SF15 48 334 8.2E-179 T 23-04-2016 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 SUPERFAMILY SSF88659 172 246 3.84E-14 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 Pfam PF04545 Sigma-70, region 4 267 320 6.6E-15 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 292 318 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 PANTHER PTHR30603 48 334 8.2E-179 T 23-04-2016 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 Gene3D G3DSA:1.10.10.10 172 221 1.3E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 Pfam PF04542 Sigma-70 region 2 99 168 6.7E-22 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 123 136 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 SUPERFAMILY SSF88659 230 327 6.54E-24 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 Pfam PF04539 Sigma-70 region 3 179 253 9.5E-21 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 56 333 3.1E-137 T 23-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 SUPERFAMILY SSF88946 48 166 4.19E-44 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 PRINTS PR00046 Major sigma-70 factor signature 147 155 1.6E-26 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 PRINTS PR00046 Major sigma-70 factor signature 123 136 1.6E-26 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 PRINTS PR00046 Major sigma-70 factor signature 292 307 1.6E-26 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 PRINTS PR00046 Major sigma-70 factor signature 307 318 1.6E-26 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 PRINTS PR00046 Major sigma-70 factor signature 271 283 1.6E-26 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS00565 f6284a7a767a4fd8606ad5a5b27380a4 334 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 5 333 39.88 T 23-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS06200 6b0b74416c1ed5dd328fc618774b54a7 340 PANTHER PTHR11019:SF52 195 340 4.6E-32 T 23-04-2016 LT40_RS06200 6b0b74416c1ed5dd328fc618774b54a7 340 Gene3D G3DSA:1.10.10.60 289 337 2.1E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS06200 6b0b74416c1ed5dd328fc618774b54a7 340 SMART SM00342 253 335 7.0E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS06200 6b0b74416c1ed5dd328fc618774b54a7 340 Pfam PF12833 Helix-turn-helix domain 260 336 1.6E-13 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS06200 6b0b74416c1ed5dd328fc618774b54a7 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 27 207 1.1E-36 T 23-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal LT40_RS06200 6b0b74416c1ed5dd328fc618774b54a7 340 SUPERFAMILY SSF46689 289 337 2.11E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS06200 6b0b74416c1ed5dd328fc618774b54a7 340 PANTHER PTHR11019 195 340 4.6E-32 T 23-04-2016 LT40_RS14185 873c0bc16459a7fe191ec193686a463b 346 SUPERFAMILY SSF53383 7 343 9.57E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS14185 873c0bc16459a7fe191ec193686a463b 346 PANTHER PTHR10289 1 344 7.1E-163 T 23-04-2016 LT40_RS14185 873c0bc16459a7fe191ec193686a463b 346 Pfam PF01212 Beta-eliminating lyase 7 296 4.1E-78 T 23-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 LT40_RS14185 873c0bc16459a7fe191ec193686a463b 346 PIRSF PIRSF038940 5 346 6.2E-140 T 23-04-2016 IPR026273 Low specificity L-threonine aldolase GO:0004793|GO:0006567 KEGG: 00260+4.1.2.48 LT40_RS14185 873c0bc16459a7fe191ec193686a463b 346 PANTHER PTHR10289:SF8 1 344 7.1E-163 T 23-04-2016 LT40_RS14185 873c0bc16459a7fe191ec193686a463b 346 Gene3D G3DSA:3.40.640.10 7 254 1.5E-65 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS14185 873c0bc16459a7fe191ec193686a463b 346 Gene3D G3DSA:3.90.1150.10 257 343 1.0E-16 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 Gene3D G3DSA:1.10.150.200 413 474 6.4E-5 T 23-04-2016 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 Gene3D G3DSA:3.20.20.80 9 96 1.4E-70 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 Gene3D G3DSA:3.20.20.80 734 856 1.4E-70 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 Gene3D G3DSA:3.20.20.80 303 388 1.4E-70 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 Gene3D G3DSA:3.20.20.80 577 617 1.4E-70 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 PANTHER PTHR10357:SF166 726 924 1.2E-153 T 23-04-2016 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 PANTHER PTHR10357:SF166 255 422 1.2E-153 T 23-04-2016 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 PANTHER PTHR10357:SF166 17 125 1.2E-153 T 23-04-2016 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 PANTHER PTHR10357 726 924 1.2E-153 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 PANTHER PTHR10357 255 422 1.2E-153 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 PANTHER PTHR10357 17 125 1.2E-153 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 Gene3D G3DSA:3.30.1590.10 97 180 3.6E-44 T 23-04-2016 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 Gene3D G3DSA:3.30.1590.10 249 287 3.6E-44 T 23-04-2016 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 Gene3D G3DSA:1.10.10.470 618 726 2.0E-27 T 23-04-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 5 924 2.9E-280 T 23-04-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 SUPERFAMILY SSF51445 248 490 1.05E-132 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 SUPERFAMILY SSF51445 527 825 1.05E-132 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 SUPERFAMILY SSF51445 10 177 1.05E-132 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 SMART SM00642 7 492 9.1E-6 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11050 0bd3161b8bcb9c2b4903c4ad9a46dcda 929 Pfam PF00128 Alpha amylase, catalytic domain 26 94 1.5E-13 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS15865 3997ffd3f945530564cbd32f3b0652d9 77 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 72 3.0E-27 T 23-04-2016 IPR010595 Protein of unknown function DUF1161 LT40_RS15865 3997ffd3f945530564cbd32f3b0652d9 77 Pfam PF06649 Protein of unknown function (DUF1161) 24 74 3.7E-24 T 23-04-2016 IPR010595 Protein of unknown function DUF1161 LT40_RS13235 77c80b6218e130922fb5b46fa8f2192a 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS13235 77c80b6218e130922fb5b46fa8f2192a 448 PANTHER PTHR11986:SF72 20 447 9.1E-240 T 23-04-2016 LT40_RS13235 77c80b6218e130922fb5b46fa8f2192a 448 Gene3D G3DSA:3.40.640.10 71 348 2.6E-81 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS13235 77c80b6218e130922fb5b46fa8f2192a 448 Gene3D G3DSA:3.90.1150.10 350 447 2.4E-32 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS13235 77c80b6218e130922fb5b46fa8f2192a 448 Gene3D G3DSA:3.90.1150.10 14 69 2.4E-32 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS13235 77c80b6218e130922fb5b46fa8f2192a 448 PANTHER PTHR11986 20 447 9.1E-240 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS13235 77c80b6218e130922fb5b46fa8f2192a 448 SUPERFAMILY SSF53383 19 446 8.2E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS13235 77c80b6218e130922fb5b46fa8f2192a 448 Pfam PF00202 Aminotransferase class-III 24 444 1.9E-127 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 Pfam PF03466 LysR substrate binding domain 91 292 3.5E-44 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 Gene3D G3DSA:3.40.190.10 176 266 1.8E-22 T 23-04-2016 LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 Gene3D G3DSA:1.10.10.10 1 84 1.4E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 Gene3D G3DSA:3.40.190.10 90 175 8.9E-22 T 23-04-2016 LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 SUPERFAMILY SSF53850 91 294 6.65E-43 T 23-04-2016 LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 PANTHER PTHR30419:SF3 1 297 3.1E-104 T 23-04-2016 LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 SUPERFAMILY SSF46785 1 84 1.17E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11145 8792c3278d4147837c8e0d0dde4d4d90 297 PANTHER PTHR30419 1 297 3.1E-104 T 23-04-2016 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 18 321 41.915 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 Gene3D G3DSA:3.40.50.1370 163 298 3.3E-48 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PANTHER PTHR11405:SF16 1 329 5.1E-134 T 23-04-2016 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 171 316 9.8E-24 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 19 319 3.2E-90 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 284 307 5.9E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 65 84 5.9E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 272 281 5.9E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 151 162 5.9E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 Gene3D G3DSA:3.40.50.1370 19 162 7.1E-50 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 19 163 4.3E-38 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PANTHER PTHR11405 1 329 5.1E-134 T 23-04-2016 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 65 72 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 SUPERFAMILY SSF53671 18 321 1.3E-95 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 300 314 2.9E-31 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 150 167 2.9E-31 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 93 102 2.9E-31 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 235 244 2.9E-31 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 55 77 2.9E-31 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS14575 c29d60e3596dcdef98553235a9ca8982 334 PRINTS PR00101 Aspartate carbamoyltransferase signature 276 281 2.9E-31 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS04605 e3a2ede48ac0e5d32a7512d6b9bf9591 193 SUPERFAMILY SSF88659 124 187 2.8E-17 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS04605 e3a2ede48ac0e5d32a7512d6b9bf9591 193 SUPERFAMILY SSF88946 1 108 4.87E-33 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS04605 e3a2ede48ac0e5d32a7512d6b9bf9591 193 PANTHER PTHR30173 1 187 4.4E-56 T 23-04-2016 LT40_RS04605 e3a2ede48ac0e5d32a7512d6b9bf9591 193 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 3 190 2.4E-97 T 23-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS04605 e3a2ede48ac0e5d32a7512d6b9bf9591 193 PANTHER PTHR30173:SF1 1 187 4.4E-56 T 23-04-2016 LT40_RS04605 e3a2ede48ac0e5d32a7512d6b9bf9591 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 186 6.4E-30 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS04605 e3a2ede48ac0e5d32a7512d6b9bf9591 193 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 23-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS04605 e3a2ede48ac0e5d32a7512d6b9bf9591 193 Gene3D G3DSA:1.10.10.10 123 188 1.4E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04605 e3a2ede48ac0e5d32a7512d6b9bf9591 193 Pfam PF04542 Sigma-70 region 2 25 92 9.1E-18 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS04605 e3a2ede48ac0e5d32a7512d6b9bf9591 193 Gene3D G3DSA:1.10.1740.10 2 111 2.5E-38 T 23-04-2016 LT40_RS04605 e3a2ede48ac0e5d32a7512d6b9bf9591 193 Pfam PF08281 Sigma-70, region 4 132 181 2.2E-18 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18175 8322ae2d9ad0f03ed80268016072c0f2 266 SUPERFAMILY SSF51366 14 264 1.41E-86 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LT40_RS18175 8322ae2d9ad0f03ed80268016072c0f2 266 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 58 76 - T 23-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 LT40_RS18175 8322ae2d9ad0f03ed80268016072c0f2 266 PANTHER PTHR22854 1 264 1.6E-115 T 23-04-2016 LT40_RS18175 8322ae2d9ad0f03ed80268016072c0f2 266 Gene3D G3DSA:3.20.20.70 5 264 4.5E-104 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS18175 8322ae2d9ad0f03ed80268016072c0f2 266 PANTHER PTHR22854:SF2 1 264 1.6E-115 T 23-04-2016 LT40_RS18175 8322ae2d9ad0f03ed80268016072c0f2 266 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 262 2.9E-98 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 LT40_RS18175 8322ae2d9ad0f03ed80268016072c0f2 266 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 5 265 36.505 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 SMART SM00729 375 628 7.3E-8 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 379 399 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 Pfam PF11842 Domain of unknown function (DUF3362) 593 749 9.2E-50 T 23-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 Gene3D G3DSA:3.80.30.20 373 624 7.7E-49 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 PANTHER PTHR32331:SF3 2 727 0.0 T 23-04-2016 LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 22 694 49.593 T 23-04-2016 IPR022946 Uncharacterised protein family UPF0313 LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 Pfam PF08497 Radical SAM N-terminal 23 378 7.9E-145 T 23-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 PANTHER PTHR32331 2 727 0.0 T 23-04-2016 LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 Pfam PF04055 Radical SAM superfamily 379 584 1.5E-21 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 SUPERFAMILY SSF102114 362 439 1.83E-13 T 23-04-2016 LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 SUPERFAMILY SSF102114 469 617 1.83E-13 T 23-04-2016 LT40_RS13720 912ae776b23e5f68edc18758f9aee01a 766 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 23 643 2.3E-262 T 23-04-2016 IPR022946 Uncharacterised protein family UPF0313 LT40_RS14275 806153412a1f24878801618520384b36 229 SUPERFAMILY SSF110997 150 222 3.92E-17 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS14275 806153412a1f24878801618520384b36 229 Gene3D G3DSA:3.30.70.1070 146 222 2.7E-22 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS14275 806153412a1f24878801618520384b36 229 Pfam PF05036 Sporulation related domain 150 218 1.4E-17 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS13885 c3d06510165333b212301fb2c3961a5d 343 SUPERFAMILY SSF52540 117 336 5.31E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13885 c3d06510165333b212301fb2c3961a5d 343 Gene3D G3DSA:3.40.50.300 117 277 5.1E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13885 c3d06510165333b212301fb2c3961a5d 343 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 82 335 3.1E-76 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 LT40_RS13885 c3d06510165333b212301fb2c3961a5d 343 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 45 342 35.375 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 LT40_RS13885 c3d06510165333b212301fb2c3961a5d 343 Pfam PF03193 Protein of unknown function, DUF258 104 277 1.4E-55 T 23-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 LT40_RS13885 c3d06510165333b212301fb2c3961a5d 343 PANTHER PTHR32120 3 340 1.1E-140 T 23-04-2016 LT40_RS13885 c3d06510165333b212301fb2c3961a5d 343 PANTHER PTHR32120:SF2 3 340 1.1E-140 T 23-04-2016 LT40_RS13885 c3d06510165333b212301fb2c3961a5d 343 Gene3D G3DSA:1.10.40.50 279 340 6.8E-21 T 23-04-2016 LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 PANTHER PTHR30154 1 155 1.6E-60 T 23-04-2016 LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 SUPERFAMILY SSF46785 4 89 7.93E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 PANTHER PTHR30154:SF17 1 155 1.6E-60 T 23-04-2016 LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 Pfam PF13404 AsnC-type helix-turn-helix domain 6 46 8.1E-16 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 SMART SM00344 8 114 6.4E-34 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 Gene3D G3DSA:1.10.10.10 8 57 1.1E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 Pfam PF01037 Lrp/AsnC ligand binding domain 71 145 1.4E-22 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 SUPERFAMILY SSF54909 65 154 1.34E-22 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 Gene3D G3DSA:3.30.70.920 58 154 1.8E-30 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 1.0E-8 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 1.0E-8 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS12130 91d65d39309b4a9c5c6b9f88a8755101 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 1.0E-8 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 SUPERFAMILY SSF55347 161 325 1.55E-53 T 23-04-2016 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 SMART SM00846 7 161 3.3E-73 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 Gene3D G3DSA:3.40.50.720 6 169 8.9E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 8 161 1.8E-49 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 182 198 1.9E-22 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.9E-22 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 280 295 1.9E-22 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 155 173 1.9E-22 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 239 256 1.9E-22 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 PANTHER PTHR10836:SF47 8 349 1.9E-209 T 23-04-2016 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 Gene3D G3DSA:3.30.360.10 170 326 4.0E-55 T 23-04-2016 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 167 323 1.1E-47 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 SUPERFAMILY SSF51735 8 175 3.18E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 PANTHER PTHR10836 8 349 1.9E-209 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 8 336 1.7E-170 T 23-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 LT40_RS17335 f0a1c512a6fd3412eb7f8ec60aba8995 351 PIRSF PIRSF000149 5 346 1.1E-127 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS11010 9c8be7efc77890bce0f38296f80e76e2 276 Hamap MF_00297 NADH pyrophosphatase [nudC]. 6 271 48.889 T 23-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 LT40_RS11010 9c8be7efc77890bce0f38296f80e76e2 276 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 18 105 1.0E-7 T 23-04-2016 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 LT40_RS11010 9c8be7efc77890bce0f38296f80e76e2 276 PANTHER PTHR22769 99 250 2.8E-61 T 23-04-2016 LT40_RS11010 9c8be7efc77890bce0f38296f80e76e2 276 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 107 138 1.6E-11 T 23-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 LT40_RS11010 9c8be7efc77890bce0f38296f80e76e2 276 Pfam PF00293 NUDIX domain 144 259 2.0E-18 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LT40_RS11010 9c8be7efc77890bce0f38296f80e76e2 276 Gene3D G3DSA:3.90.79.10 103 264 4.4E-43 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS11010 9c8be7efc77890bce0f38296f80e76e2 276 SUPERFAMILY SSF55811 92 259 1.11E-41 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS11010 9c8be7efc77890bce0f38296f80e76e2 276 SUPERFAMILY SSF55811 5 110 2.23E-21 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS11010 9c8be7efc77890bce0f38296f80e76e2 276 PANTHER PTHR22769:SF7 99 250 2.8E-61 T 23-04-2016 LT40_RS03350 2fb2fff350a0cbe9326558a1da94a3b7 261 Gene3D G3DSA:3.40.190.10 218 255 4.0E-11 T 23-04-2016 LT40_RS03350 2fb2fff350a0cbe9326558a1da94a3b7 261 Gene3D G3DSA:3.40.190.10 42 132 4.0E-11 T 23-04-2016 LT40_RS03350 2fb2fff350a0cbe9326558a1da94a3b7 261 PANTHER PTHR30632:SF5 28 260 1.6E-55 T 23-04-2016 LT40_RS03350 2fb2fff350a0cbe9326558a1da94a3b7 261 PANTHER PTHR30632 28 260 1.6E-55 T 23-04-2016 LT40_RS03350 2fb2fff350a0cbe9326558a1da94a3b7 261 Pfam PF13531 Bacterial extracellular solute-binding protein 32 257 9.2E-29 T 23-04-2016 LT40_RS03350 2fb2fff350a0cbe9326558a1da94a3b7 261 SUPERFAMILY SSF53850 31 259 6.16E-32 T 23-04-2016 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PANTHER PTHR30222 4 356 3.4E-149 T 23-04-2016 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PIRSF PIRSF019574 2 357 4.3E-115 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 SUPERFAMILY SSF53850 20 355 1.38E-89 T 23-04-2016 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 25 41 5.6E-53 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 68 82 5.6E-53 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 303 329 5.6E-53 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 84 97 5.6E-53 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 117 133 5.6E-53 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 208 227 5.6E-53 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 171 190 5.6E-53 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 41 62 5.6E-53 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 5.6E-53 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 258 277 5.6E-53 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 Gene3D G3DSA:3.40.190.10 21 140 1.1E-17 T 23-04-2016 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 Pfam PF13416 Bacterial extracellular solute-binding protein 37 321 3.1E-24 T 23-04-2016 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 PANTHER PTHR30222:SF11 4 356 3.4E-149 T 23-04-2016 LT40_RS03010 d3937af5538cb88fcbe3d19dd2670b8f 357 Gene3D G3DSA:3.40.190.10 141 307 1.7E-61 T 23-04-2016 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 PIRSF PIRSF002560 1 154 3.2E-62 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 PRINTS PR00601 Bacterioferritin signature 106 126 8.0E-39 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 PRINTS PR00601 Bacterioferritin signature 85 105 8.0E-39 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 PRINTS PR00601 Bacterioferritin signature 44 64 8.0E-39 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 PRINTS PR00601 Bacterioferritin signature 3 22 8.0E-39 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 PRINTS PR00601 Bacterioferritin signature 23 43 8.0E-39 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 PRINTS PR00601 Bacterioferritin signature 128 149 8.0E-39 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 SUPERFAMILY SSF47240 1 154 1.44E-45 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 PANTHER PTHR30295 1 153 2.4E-89 T 23-04-2016 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 Gene3D G3DSA:1.20.1260.10 1 153 1.5E-53 T 23-04-2016 IPR012347 Ferritin-related LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 PANTHER PTHR30295:SF9 1 153 2.4E-89 T 23-04-2016 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 Pfam PF00210 Ferritin-like domain 8 143 4.9E-35 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LT40_RS18490 f42c26512e384d5848dd9a582c650f13 154 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 5.3E-46 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 392 670 6.6E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 PANTHER PTHR22893 1 433 3.2E-193 T 23-04-2016 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 PANTHER PTHR22893:SF25 1 433 3.2E-193 T 23-04-2016 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 609 623 1.4E-6 T 23-04-2016 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 660 667 1.4E-6 T 23-04-2016 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 392 414 1.4E-6 T 23-04-2016 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 SUPERFAMILY SSF51905 379 683 8.93E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 SUPERFAMILY SSF51395 2 374 8.74E-98 T 23-04-2016 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 343 7.8E-64 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 608 624 7.9E-5 T 23-04-2016 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 393 412 7.9E-5 T 23-04-2016 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 Gene3D G3DSA:3.50.50.60 485 632 3.2E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 Gene3D G3DSA:3.20.20.70 2 377 9.5E-108 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 Gene3D G3DSA:3.50.50.60 633 684 9.2E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17515 77045ede6a7380ef92976fb3fdef6365 686 Gene3D G3DSA:3.50.50.60 390 484 9.2E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00840 54ddaf2a19b50e843a0ac479b0e1fae8 215 PANTHER PTHR10851:SF0 1 215 1.0E-109 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LT40_RS00840 54ddaf2a19b50e843a0ac479b0e1fae8 215 Gene3D G3DSA:2.30.110.10 17 215 8.9E-84 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS00840 54ddaf2a19b50e843a0ac479b0e1fae8 215 SUPERFAMILY SSF50475 8 215 1.88E-66 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS00840 54ddaf2a19b50e843a0ac479b0e1fae8 215 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 185 198 - T 23-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LT40_RS00840 54ddaf2a19b50e843a0ac479b0e1fae8 215 PIRSF PIRSF000190 1 215 2.3E-78 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LT40_RS00840 54ddaf2a19b50e843a0ac479b0e1fae8 215 PANTHER PTHR10851 1 215 1.0E-109 T 23-04-2016 LT40_RS00840 54ddaf2a19b50e843a0ac479b0e1fae8 215 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 175 215 1.2E-18 T 23-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LT40_RS00840 54ddaf2a19b50e843a0ac479b0e1fae8 215 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 215 1.3E-87 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LT40_RS00840 54ddaf2a19b50e843a0ac479b0e1fae8 215 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 215 38.207 T 23-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LT40_RS00840 54ddaf2a19b50e843a0ac479b0e1fae8 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 46 122 2.1E-26 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LT40_RS00755 91536ddc930ed9f365f3cfa627c516d9 215 PANTHER PTHR30055 2 197 5.7E-64 T 23-04-2016 LT40_RS00755 91536ddc930ed9f365f3cfa627c516d9 215 PANTHER PTHR30055:SF40 2 197 5.7E-64 T 23-04-2016 LT40_RS00755 91536ddc930ed9f365f3cfa627c516d9 215 SUPERFAMILY SSF48498 86 190 2.18E-8 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LT40_RS00755 91536ddc930ed9f365f3cfa627c516d9 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 7.3E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS00755 91536ddc930ed9f365f3cfa627c516d9 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 7.3E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS00755 91536ddc930ed9f365f3cfa627c516d9 215 SUPERFAMILY SSF46689 9 77 3.39E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS00755 91536ddc930ed9f365f3cfa627c516d9 215 Gene3D G3DSA:1.10.357.10 12 210 9.1E-29 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS00755 91536ddc930ed9f365f3cfa627c516d9 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 7.8E-15 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS00755 91536ddc930ed9f365f3cfa627c516d9 215 Pfam PF13305 WHG domain 87 173 6.9E-6 T 23-04-2016 IPR025996 WHG domain LT40_RS00360 b3b394112912539a2bb5e98e20c99ed0 401 SUPERFAMILY SSF53383 6 398 2.58E-104 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS00360 b3b394112912539a2bb5e98e20c99ed0 401 Gene3D G3DSA:3.40.640.10 34 275 5.5E-74 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS00360 b3b394112912539a2bb5e98e20c99ed0 401 PANTHER PTHR11601:SF17 4 400 3.7E-146 T 23-04-2016 LT40_RS00360 b3b394112912539a2bb5e98e20c99ed0 401 Pfam PF00266 Aminotransferase class-V 24 389 1.9E-134 T 23-04-2016 IPR000192 Aminotransferase class V domain LT40_RS00360 b3b394112912539a2bb5e98e20c99ed0 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 233 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LT40_RS00360 b3b394112912539a2bb5e98e20c99ed0 401 PANTHER PTHR11601 4 400 3.7E-146 T 23-04-2016 LT40_RS00360 b3b394112912539a2bb5e98e20c99ed0 401 Gene3D G3DSA:3.90.1150.10 276 399 5.8E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 PANTHER PTHR30537:SF22 1 298 1.6E-115 T 23-04-2016 LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 2.5E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 TIGRFAM TIGR03418 chol_sulf_TF: putative choline sulfate-utilization transcription factor 8 298 2.0E-129 T 23-04-2016 IPR017786 Transcription factor, choline sulphate-utilisation, putative LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.2E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.2E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.2E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 SUPERFAMILY SSF53850 97 300 2.64E-37 T 23-04-2016 LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 Gene3D G3DSA:1.10.10.10 4 88 7.2E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 SUPERFAMILY SSF46785 8 88 7.32E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 PANTHER PTHR30537 1 298 1.6E-115 T 23-04-2016 LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 Pfam PF03466 LysR substrate binding domain 93 298 5.7E-38 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS15915 dce6d3063324ec13071be3e6e3e95c9c 302 Gene3D G3DSA:3.40.190.10 97 196 9.8E-30 T 23-04-2016 LT40_RS01745 d80fd1b467057adf3b0909a1d9f6e002 564 PANTHER PTHR30607 2 564 3.5E-291 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LT40_RS01745 d80fd1b467057adf3b0909a1d9f6e002 564 PIRSF PIRSF001294 1 564 7.9E-236 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LT40_RS01745 d80fd1b467057adf3b0909a1d9f6e002 564 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 562 34.033 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LT40_RS01745 d80fd1b467057adf3b0909a1d9f6e002 564 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 562 4.5E-220 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LT40_RS01745 d80fd1b467057adf3b0909a1d9f6e002 564 Pfam PF03814 Potassium-transporting ATPase A subunit 11 560 1.2E-233 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 479 46.85 T 23-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 Gene3D G3DSA:3.30.870.10 113 311 9.8E-47 T 23-04-2016 LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 Gene3D G3DSA:3.30.870.10 319 477 2.4E-36 T 23-04-2016 LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 SUPERFAMILY SSF56024 83 308 4.4E-52 T 23-04-2016 LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 SMART SM00155 392 419 6.2E-8 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 SMART SM00155 218 245 8.1E-4 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 Pfam PF13396 Phospholipase_D-nuclease N-terminal 19 60 2.5E-6 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 Pfam PF13091 PLD-like domain 136 278 1.4E-11 T 23-04-2016 IPR025202 Phospholipase D-like domain LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 Pfam PF13091 PLD-like domain 320 441 8.4E-25 T 23-04-2016 IPR025202 Phospholipase D-like domain LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 18 479 4.5E-112 T 23-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 SUPERFAMILY SSF56024 270 462 1.73E-45 T 23-04-2016 LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 PANTHER PTHR21248 18 479 6.1E-187 T 23-04-2016 LT40_RS16195 829c1df0a98efa82627ffd883f7d7c8b 479 PANTHER PTHR21248:SF9 18 479 6.1E-187 T 23-04-2016 LT40_RS02550 293d57fd07226891cdc0e613f9398938 159 Gene3D G3DSA:2.30.30.40 90 141 1.1E-7 T 23-04-2016 LT40_RS02550 293d57fd07226891cdc0e613f9398938 159 Gene3D G3DSA:2.40.50.180 54 89 1.2E-10 T 23-04-2016 LT40_RS02550 293d57fd07226891cdc0e613f9398938 159 PANTHER PTHR22617 9 159 1.5E-109 T 23-04-2016 LT40_RS02550 293d57fd07226891cdc0e613f9398938 159 Pfam PF01584 CheW-like domain 15 151 1.0E-39 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS02550 293d57fd07226891cdc0e613f9398938 159 SMART SM00260 11 148 2.5E-52 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS02550 293d57fd07226891cdc0e613f9398938 159 SUPERFAMILY SSF50341 11 154 4.32E-42 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS02550 293d57fd07226891cdc0e613f9398938 159 PANTHER PTHR22617:SF26 9 159 1.5E-109 T 23-04-2016 LT40_RS10135 30b4b6988c4a9c0950212f1bf8cd8210 517 SMART SM00858 19 89 1.4E-10 T 23-04-2016 IPR013974 SAF domain LT40_RS10135 30b4b6988c4a9c0950212f1bf8cd8210 517 PANTHER PTHR30536 1 517 0.0 T 23-04-2016 LT40_RS10135 30b4b6988c4a9c0950212f1bf8cd8210 517 PANTHER PTHR30536:SF1 1 517 0.0 T 23-04-2016 LT40_RS10135 30b4b6988c4a9c0950212f1bf8cd8210 517 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 116 514 3.3E-145 T 23-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 LT40_RS10135 30b4b6988c4a9c0950212f1bf8cd8210 517 Pfam PF08666 SAF domain 19 88 9.4E-12 T 23-04-2016 IPR013974 SAF domain LT40_RS10135 30b4b6988c4a9c0950212f1bf8cd8210 517 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 12 517 8.2E-286 T 23-04-2016 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497|UniPathway: UPA00565 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 Gene3D G3DSA:1.10.150.80 530 598 1.7E-18 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 SMART SM00341 528 608 4.9E-18 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 SUPERFAMILY SSF52540 5 189 5.33E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 Gene3D G3DSA:1.10.10.10 337 510 6.5E-57 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 Pfam PF00270 DEAD/DEAH box helicase 22 180 1.3E-17 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 PANTHER PTHR13710:SF81 1 599 2.3E-278 T 23-04-2016 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 Pfam PF00570 HRDC domain 533 598 1.3E-21 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 Pfam PF09382 RQC domain 401 510 9.0E-36 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 SMART SM00490 242 323 3.8E-26 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 Pfam PF00271 Helicase conserved C-terminal domain 218 323 4.9E-15 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 SMART SM00487 14 210 1.4E-29 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 455 4.8E-152 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 PANTHER PTHR13710 1 599 2.3E-278 T 23-04-2016 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 SUPERFAMILY SSF47819 527 600 1.2E-21 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 Gene3D G3DSA:3.40.50.300 4 194 1.8E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 Gene3D G3DSA:3.40.50.300 198 336 8.1E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 SMART SM00956 404 507 1.7E-47 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 598 2.4E-243 T 23-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 Pfam PF16124 RecQ zinc-binding 335 396 2.2E-19 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain LT40_RS05745 d206aadb9d520167122ba9588b50a3a0 713 SUPERFAMILY SSF52540 200 448 6.38E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16055 1fc6b194f626fd1706c25c44a747f41b 134 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 116 16.745 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LT40_RS16055 1fc6b194f626fd1706c25c44a747f41b 134 PANTHER PTHR33992 2 120 6.9E-32 T 23-04-2016 LT40_RS16055 1fc6b194f626fd1706c25c44a747f41b 134 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 10 115 6.2E-25 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LT40_RS16055 1fc6b194f626fd1706c25c44a747f41b 134 Gene3D G3DSA:3.30.230.10 6 115 1.0E-29 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS16055 1fc6b194f626fd1706c25c44a747f41b 134 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 93 2.0E-34 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LT40_RS16055 1fc6b194f626fd1706c25c44a747f41b 134 SUPERFAMILY SSF54211 8 115 1.87E-27 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS16055 1fc6b194f626fd1706c25c44a747f41b 134 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 57 71 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 LT40_RS16055 1fc6b194f626fd1706c25c44a747f41b 134 Pfam PF00825 Ribonuclease P 8 113 2.6E-28 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LT40_RS18395 a2bc5c3e1c67bdbd87b00713b6a67c11 63 PANTHER PTHR10916 1 63 8.6E-27 T 23-04-2016 LT40_RS18395 a2bc5c3e1c67bdbd87b00713b6a67c11 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.4E-21 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18395 a2bc5c3e1c67bdbd87b00713b6a67c11 63 SUPERFAMILY SSF46561 1 61 5.36E-21 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18395 a2bc5c3e1c67bdbd87b00713b6a67c11 63 Pfam PF00831 Ribosomal L29 protein 4 59 1.3E-22 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18395 a2bc5c3e1c67bdbd87b00713b6a67c11 63 Gene3D G3DSA:1.10.287.310 1 60 1.3E-26 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18395 a2bc5c3e1c67bdbd87b00713b6a67c11 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 23-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18395 a2bc5c3e1c67bdbd87b00713b6a67c11 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 17.658 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS10305 10c432ff4b7f0a2fb8a4728cff21f818 607 PANTHER PTHR16254:SF6 1 563 1.7E-229 T 23-04-2016 LT40_RS10305 10c432ff4b7f0a2fb8a4728cff21f818 607 Pfam PF00999 Sodium/hydrogen exchanger family 12 378 4.7E-70 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LT40_RS10305 10c432ff4b7f0a2fb8a4728cff21f818 607 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 286 4.6E-86 T 23-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 LT40_RS10305 10c432ff4b7f0a2fb8a4728cff21f818 607 Pfam PF02254 TrkA-N domain 409 522 5.8E-24 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LT40_RS10305 10c432ff4b7f0a2fb8a4728cff21f818 607 SUPERFAMILY SSF51735 408 543 1.97E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10305 10c432ff4b7f0a2fb8a4728cff21f818 607 Gene3D G3DSA:3.40.50.720 402 535 7.9E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10305 10c432ff4b7f0a2fb8a4728cff21f818 607 PANTHER PTHR16254 1 563 1.7E-229 T 23-04-2016 LT40_RS12645 ccc94a9839d3ec8b91473b0e53230f66 314 Gene3D G3DSA:3.40.50.620 1 187 2.5E-60 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS12645 ccc94a9839d3ec8b91473b0e53230f66 314 PIRSF PIRSF000089 1 314 1.0E-101 T 23-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 LT40_RS12645 ccc94a9839d3ec8b91473b0e53230f66 314 PANTHER PTHR10909:SF294 109 310 3.2E-129 T 23-04-2016 LT40_RS12645 ccc94a9839d3ec8b91473b0e53230f66 314 SUPERFAMILY SSF52467 194 313 1.31E-48 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12645 ccc94a9839d3ec8b91473b0e53230f66 314 PANTHER PTHR10909 109 310 3.2E-129 T 23-04-2016 LT40_RS12645 ccc94a9839d3ec8b91473b0e53230f66 314 SUPERFAMILY SSF52402 3 191 2.65E-52 T 23-04-2016 LT40_RS12645 ccc94a9839d3ec8b91473b0e53230f66 314 Gene3D G3DSA:3.40.50.1220 189 312 8.5E-62 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12645 ccc94a9839d3ec8b91473b0e53230f66 314 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 258 284 - T 23-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site LT40_RS12645 ccc94a9839d3ec8b91473b0e53230f66 314 Pfam PF01012 Electron transfer flavoprotein domain 11 175 8.5E-36 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 LT40_RS12645 ccc94a9839d3ec8b91473b0e53230f66 314 SMART SM00893 8 187 6.6E-49 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 LT40_RS12645 ccc94a9839d3ec8b91473b0e53230f66 314 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 195 277 1.1E-36 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 Pfam PF12833 Helix-turn-helix domain 189 265 1.9E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 Pfam PF02311 AraC-like ligand binding domain 22 130 2.0E-18 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 PANTHER PTHR11019:SF75 1 273 6.0E-45 T 23-04-2016 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 SUPERFAMILY SSF51215 23 139 1.57E-17 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 PANTHER PTHR11019 1 273 6.0E-45 T 23-04-2016 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 SUPERFAMILY SSF46689 167 217 5.64E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 Gene3D G3DSA:1.10.10.60 165 220 7.2E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 Gene3D G3DSA:1.10.10.60 221 266 3.4E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 SUPERFAMILY SSF46689 220 266 6.79E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 168 212 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 261 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 SMART SM00342 183 265 2.6E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS01530 e5d6347e693436b5076f1382afe423d2 283 Gene3D G3DSA:2.60.120.280 23 129 1.0E-13 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 462 1.2E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 4.9E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 4.9E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 4.9E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 Gene3D G3DSA:1.10.287.130 234 297 4.1E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 SUPERFAMILY SSF55874 300 463 8.51E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 SMART SM00388 244 310 5.2E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 PANTHER PTHR24423:SF354 184 462 4.1E-100 T 23-04-2016 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 PANTHER PTHR24423:SF354 72 95 4.1E-100 T 23-04-2016 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 7 462 1.1E-142 T 23-04-2016 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 Gene3D G3DSA:3.30.565.10 298 465 2.5E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 309 6.7E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 SMART SM00304 190 243 1.6E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 SMART SM00387 353 465 2.6E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 SUPERFAMILY SSF47384 227 309 1.71E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 Pfam PF00672 HAMP domain 172 239 6.8E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 PANTHER PTHR24423 184 462 4.1E-100 T 23-04-2016 LT40_RS08360 012f90123147f3746d4a8b5d7d8683d1 467 PANTHER PTHR24423 72 95 4.1E-100 T 23-04-2016 LT40_RS18160 34182e1cdaae089b0b49ab52de819d2d 492 Pfam PF00425 chorismate binding enzyme 223 476 9.9E-97 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal LT40_RS18160 34182e1cdaae089b0b49ab52de819d2d 492 SUPERFAMILY SSF56322 14 484 6.41E-157 T 23-04-2016 IPR005801 ADC synthase GO:0009058 LT40_RS18160 34182e1cdaae089b0b49ab52de819d2d 492 Gene3D G3DSA:3.60.120.10 12 489 1.5E-174 T 23-04-2016 IPR005801 ADC synthase GO:0009058 LT40_RS18160 34182e1cdaae089b0b49ab52de819d2d 492 PRINTS PR00095 Anthranilate synthase component I signature 418 432 8.8E-26 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS18160 34182e1cdaae089b0b49ab52de819d2d 492 PRINTS PR00095 Anthranilate synthase component I signature 324 337 8.8E-26 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS18160 34182e1cdaae089b0b49ab52de819d2d 492 PRINTS PR00095 Anthranilate synthase component I signature 338 351 8.8E-26 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS18160 34182e1cdaae089b0b49ab52de819d2d 492 PRINTS PR00095 Anthranilate synthase component I signature 433 447 8.8E-26 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS18160 34182e1cdaae089b0b49ab52de819d2d 492 PANTHER PTHR11236 1 490 1.3E-236 T 23-04-2016 LT40_RS18160 34182e1cdaae089b0b49ab52de819d2d 492 PANTHER PTHR11236:SF9 1 490 1.3E-236 T 23-04-2016 LT40_RS18160 34182e1cdaae089b0b49ab52de819d2d 492 Pfam PF04715 Anthranilate synthase component I, N terminal region 28 167 1.2E-31 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS18160 34182e1cdaae089b0b49ab52de819d2d 492 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 484 1.2E-171 T 23-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS18140 fee0d5b73d6ac0415be1090098b38ceb 415 PANTHER PTHR30193 175 413 9.3E-159 T 23-04-2016 LT40_RS18140 fee0d5b73d6ac0415be1090098b38ceb 415 PANTHER PTHR30193 8 71 9.3E-159 T 23-04-2016 LT40_RS18140 fee0d5b73d6ac0415be1090098b38ceb 415 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 216 406 2.3E-8 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18140 fee0d5b73d6ac0415be1090098b38ceb 415 PANTHER PTHR30193:SF8 175 413 9.3E-159 T 23-04-2016 LT40_RS18140 fee0d5b73d6ac0415be1090098b38ceb 415 PANTHER PTHR30193:SF8 8 71 9.3E-159 T 23-04-2016 LT40_RS18140 fee0d5b73d6ac0415be1090098b38ceb 415 Gene3D G3DSA:1.10.3720.10 33 59 5.9E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18140 fee0d5b73d6ac0415be1090098b38ceb 415 Gene3D G3DSA:1.10.3720.10 176 409 5.9E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18140 fee0d5b73d6ac0415be1090098b38ceb 415 SUPERFAMILY SSF161098 27 53 6.21E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18140 fee0d5b73d6ac0415be1090098b38ceb 415 SUPERFAMILY SSF161098 190 406 6.21E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS19975 8130280c261aba8df40ad50ff277f549 319 SUPERFAMILY SSF52283 20 140 3.59E-29 T 23-04-2016 LT40_RS19975 8130280c261aba8df40ad50ff277f549 319 Gene3D G3DSA:3.40.50.720 115 290 1.8E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19975 8130280c261aba8df40ad50ff277f549 319 SUPERFAMILY SSF51735 105 290 1.25E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19975 8130280c261aba8df40ad50ff277f549 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 2.1E-49 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LT40_RS19975 8130280c261aba8df40ad50ff277f549 319 PANTHER PTHR10996:SF91 14 319 5.9E-105 T 23-04-2016 LT40_RS19975 8130280c261aba8df40ad50ff277f549 319 Gene3D G3DSA:3.40.50.720 22 114 2.1E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19975 8130280c261aba8df40ad50ff277f549 319 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 22 318 7.0E-26 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LT40_RS19975 8130280c261aba8df40ad50ff277f549 319 PANTHER PTHR10996 14 319 5.9E-105 T 23-04-2016 LT40_RS04795 c20f092173638229f5a65bd40addeb8a 211 PANTHER PTHR11079 6 210 3.8E-63 T 23-04-2016 LT40_RS04795 c20f092173638229f5a65bd40addeb8a 211 Pfam PF00849 RNA pseudouridylate synthase 15 161 6.6E-27 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS04795 c20f092173638229f5a65bd40addeb8a 211 SUPERFAMILY SSF55120 5 207 8.64E-61 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS04795 c20f092173638229f5a65bd40addeb8a 211 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 53 67 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS04795 c20f092173638229f5a65bd40addeb8a 211 PANTHER PTHR11079:SF86 6 210 3.8E-63 T 23-04-2016 LT40_RS14130 351f342a8dcc0cc5499ef4ed863db991 168 SUPERFAMILY SSF50630 22 163 2.18E-39 T 23-04-2016 IPR021109 Aspartic peptidase domain LT40_RS14130 351f342a8dcc0cc5499ef4ed863db991 168 Gene3D G3DSA:2.40.70.10 20 155 8.2E-43 T 23-04-2016 IPR021109 Aspartic peptidase domain LT40_RS14130 351f342a8dcc0cc5499ef4ed863db991 168 Pfam PF05618 Putative ATP-dependant zinc protease 23 166 6.2E-45 T 23-04-2016 LT40_RS14130 351f342a8dcc0cc5499ef4ed863db991 168 PANTHER PTHR38037 1 168 5.1E-46 T 23-04-2016 LT40_RS12825 bfd42a4a0e3cb023e2bc3f287e4b04d2 158 PANTHER PTHR20941:SF10 4 158 1.0E-57 T 23-04-2016 LT40_RS12825 bfd42a4a0e3cb023e2bc3f287e4b04d2 158 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 130 1.8E-39 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS12825 bfd42a4a0e3cb023e2bc3f287e4b04d2 158 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 1.4E-33 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS12825 bfd42a4a0e3cb023e2bc3f287e4b04d2 158 Gene3D G3DSA:3.30.70.560 4 151 7.9E-49 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS12825 bfd42a4a0e3cb023e2bc3f287e4b04d2 158 SUPERFAMILY SSF55083 1 152 1.31E-47 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS12825 bfd42a4a0e3cb023e2bc3f287e4b04d2 158 PANTHER PTHR20941 4 158 1.0E-57 T 23-04-2016 LT40_RS12825 bfd42a4a0e3cb023e2bc3f287e4b04d2 158 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 87 98 - T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS01785 638c5ccb7ec6247367d854b080996fd7 661 Pfam PF13559 Domain of unknown function (DUF4129) 582 649 1.3E-9 T 23-04-2016 IPR025403 Domain of unknown function DUF4129 LT40_RS01785 638c5ccb7ec6247367d854b080996fd7 661 Pfam PF01841 Transglutaminase-like superfamily 381 469 1.4E-19 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS01785 638c5ccb7ec6247367d854b080996fd7 661 PANTHER PTHR33490 1 661 1.8E-98 T 23-04-2016 LT40_RS01785 638c5ccb7ec6247367d854b080996fd7 661 SMART SM00460 400 471 1.1E-19 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS01785 638c5ccb7ec6247367d854b080996fd7 661 PANTHER PTHR33490:SF4 1 661 1.8E-98 T 23-04-2016 LT40_RS01785 638c5ccb7ec6247367d854b080996fd7 661 SUPERFAMILY SSF54001 274 599 4.77E-62 T 23-04-2016 LT40_RS01785 638c5ccb7ec6247367d854b080996fd7 661 Pfam PF11992 Domain of unknown function (DUF3488) 12 325 1.1E-97 T 23-04-2016 IPR021878 Protein of unknown function DUF3488 LT40_RS01785 638c5ccb7ec6247367d854b080996fd7 661 Gene3D G3DSA:3.90.260.10 298 590 1.2E-50 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS13230 7e93fca8eced957029422d6f0b836c56 497 PANTHER PTHR11699:SF188 1 483 0.0 T 23-04-2016 LT40_RS13230 7e93fca8eced957029422d6f0b836c56 497 Gene3D G3DSA:3.40.309.10 260 442 4.2E-64 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS13230 7e93fca8eced957029422d6f0b836c56 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 481 3.5E-207 T 23-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 LT40_RS13230 7e93fca8eced957029422d6f0b836c56 497 SUPERFAMILY SSF53720 3 483 2.88E-145 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS13230 7e93fca8eced957029422d6f0b836c56 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS13230 7e93fca8eced957029422d6f0b836c56 497 Gene3D G3DSA:3.40.605.10 3 259 2.0E-87 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS13230 7e93fca8eced957029422d6f0b836c56 497 Pfam PF00171 Aldehyde dehydrogenase family 15 477 2.3E-137 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS13230 7e93fca8eced957029422d6f0b836c56 497 PANTHER PTHR11699 1 483 0.0 T 23-04-2016 LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 ProSitePatterns PS00211 ABC transporters family signature. 420 434 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 Pfam PF00005 ABC transporter 23 180 3.1E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 Pfam PF00005 ABC transporter 298 448 1.3E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 SUPERFAMILY SSF52540 6 251 7.93E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 PANTHER PTHR24220:SF574 8 405 1.2E-180 T 23-04-2016 LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 SMART SM00382 306 496 1.7E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 SMART SM00382 31 230 5.6E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 Gene3D G3DSA:3.40.50.300 5 254 4.8E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 Gene3D G3DSA:3.40.50.300 270 522 1.2E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 SUPERFAMILY SSF52540 270 519 5.11E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 499 523 1.7E-5 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 257 4.8E-5 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS08935 f9d4d4d1bd6af2b3b461fbfcd1bac8c1 525 PANTHER PTHR24220 8 405 1.2E-180 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Gene3D G3DSA:3.90.1100.10 450 596 2.3E-149 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Gene3D G3DSA:3.90.1100.10 664 718 2.3E-149 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Gene3D G3DSA:3.90.1100.10 20 155 2.3E-149 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Pfam PF04565 RNA polymerase Rpb2, domain 3 518 585 9.8E-31 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 PANTHER PTHR20856 1051 1145 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 PANTHER PTHR20856 345 730 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 PANTHER PTHR20856 1197 1357 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 PANTHER PTHR20856 748 935 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 PANTHER PTHR20856 5 234 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1357 12.327 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Pfam PF04563 RNA polymerase beta subunit 26 504 7.4E-42 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Gene3D G3DSA:2.30.150.10 597 661 1.3E-21 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1353 0.0 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Gene3D G3DSA:2.40.50.150 833 942 5.7E-57 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Gene3D G3DSA:2.40.50.150 1062 1076 5.7E-57 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 PANTHER PTHR20856:SF20 1051 1145 0.0 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 PANTHER PTHR20856:SF20 345 730 0.0 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 PANTHER PTHR20856:SF20 1197 1357 0.0 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 PANTHER PTHR20856:SF20 748 935 0.0 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 PANTHER PTHR20856:SF20 5 234 0.0 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Pfam PF04560 RNA polymerase Rpb2, domain 7 1281 1356 4.5E-27 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1080 1092 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Pfam PF10385 RNA polymerase beta subunit external 1 domain 596 661 4.9E-18 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Gene3D G3DSA:3.90.1110.10 351 449 1.7E-67 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Gene3D G3DSA:3.90.1110.10 157 234 1.7E-67 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 SUPERFAMILY SSF64484 1056 1356 0.0 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 SUPERFAMILY SSF64484 348 944 0.0 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 SUPERFAMILY SSF64484 12 230 0.0 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Pfam PF00562 RNA polymerase Rpb2, domain 6 722 1279 4.1E-160 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Gene3D G3DSA:2.40.50.100 719 797 1.6E-31 T 23-04-2016 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Gene3D G3DSA:2.40.270.10 1077 1257 2.7E-87 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Gene3D G3DSA:2.40.270.10 798 825 2.7E-87 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 227 1.1E-7 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18320 a1b08421ab4049db9f3d98fdf338788c 1357 Pfam PF04561 RNA polymerase Rpb2, domain 2 362 459 1.5E-15 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS11510 88e1d94a7d3fd004acc903aa2f0c8540 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 94 110 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS11510 88e1d94a7d3fd004acc903aa2f0c8540 448 Gene3D G3DSA:1.20.1250.20 255 444 1.8E-28 T 23-04-2016 LT40_RS11510 88e1d94a7d3fd004acc903aa2f0c8540 448 Gene3D G3DSA:1.20.1250.20 43 230 2.3E-19 T 23-04-2016 LT40_RS11510 88e1d94a7d3fd004acc903aa2f0c8540 448 Pfam PF00083 Sugar (and other) transporter 36 235 2.2E-20 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS11510 88e1d94a7d3fd004acc903aa2f0c8540 448 PANTHER PTHR23508 33 441 5.8E-126 T 23-04-2016 LT40_RS11510 88e1d94a7d3fd004acc903aa2f0c8540 448 PANTHER PTHR23508:SF1 33 441 5.8E-126 T 23-04-2016 LT40_RS11510 88e1d94a7d3fd004acc903aa2f0c8540 448 SUPERFAMILY SSF103473 32 443 1.57E-66 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS11510 88e1d94a7d3fd004acc903aa2f0c8540 448 Pfam PF07690 Major Facilitator Superfamily 275 438 7.4E-15 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS00040 ed9c332b64e3b7a3954d39dac890e58b 397 SUPERFAMILY SSF103473 3 393 1.31E-31 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS00040 ed9c332b64e3b7a3954d39dac890e58b 397 Gene3D G3DSA:1.20.1250.20 3 184 2.8E-13 T 23-04-2016 LT40_RS00040 ed9c332b64e3b7a3954d39dac890e58b 397 PANTHER PTHR23513 1 394 7.1E-33 T 23-04-2016 LT40_RS00040 ed9c332b64e3b7a3954d39dac890e58b 397 Pfam PF07690 Major Facilitator Superfamily 9 349 1.8E-17 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 221 237 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 SUPERFAMILY SSF51735 199 381 7.99E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 SMART SM00997 199 381 6.8E-81 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 Gene3D G3DSA:3.40.50.720 201 380 1.4E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 Gene3D G3DSA:3.40.50.1480 382 469 3.2E-128 T 23-04-2016 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 Gene3D G3DSA:3.40.50.1480 11 200 3.2E-128 T 23-04-2016 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 149 1.3E-69 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 SUPERFAMILY SSF52283 10 198 1.64E-105 T 23-04-2016 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 SUPERFAMILY SSF52283 382 469 1.64E-105 T 23-04-2016 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 PIRSF PIRSF001109 3 469 5.1E-184 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 SMART SM00996 12 468 5.1E-272 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 461 2.1E-150 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 PANTHER PTHR23420 8 469 6.7E-302 T 23-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 199 381 1.2E-56 T 23-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 LT40_RS14815 d127d548a4fa10b70b2d544f39905992 469 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 23-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 LT40_RS16095 7456be6bd9aea6f3a5210a6a5d754b69 289 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 42 283 1.0E-42 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LT40_RS16095 7456be6bd9aea6f3a5210a6a5d754b69 289 Hamap MF_01393 ATP synthase subunit a [atpB]. 10 288 15.663 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LT40_RS16095 7456be6bd9aea6f3a5210a6a5d754b69 289 ProSitePatterns PS00449 ATP synthase a subunit signature. 217 226 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site LT40_RS16095 7456be6bd9aea6f3a5210a6a5d754b69 289 PANTHER PTHR11410:SF7 27 125 2.3E-93 T 23-04-2016 LT40_RS16095 7456be6bd9aea6f3a5210a6a5d754b69 289 PANTHER PTHR11410:SF7 143 289 2.3E-93 T 23-04-2016 LT40_RS16095 7456be6bd9aea6f3a5210a6a5d754b69 289 PANTHER PTHR11410 27 125 2.3E-93 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LT40_RS16095 7456be6bd9aea6f3a5210a6a5d754b69 289 PANTHER PTHR11410 143 289 2.3E-93 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LT40_RS16095 7456be6bd9aea6f3a5210a6a5d754b69 289 Gene3D G3DSA:1.20.120.220 101 287 1.7E-51 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LT40_RS16095 7456be6bd9aea6f3a5210a6a5d754b69 289 SUPERFAMILY SSF81336 100 282 4.58E-40 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LT40_RS16095 7456be6bd9aea6f3a5210a6a5d754b69 289 Pfam PF00119 ATP synthase A chain 51 282 1.0E-55 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 LT40_RS16405 ac1f12cfe7bfd9690e76c06e476ddd06 131 PIRSF PIRSF029720 1 128 2.1E-43 T 23-04-2016 IPR014558 Uncharacterised conserved lipoprotein LT40_RS16405 ac1f12cfe7bfd9690e76c06e476ddd06 131 Pfam PF03640 Secreted repeat of unknown function 35 71 3.0E-12 T 23-04-2016 IPR005297 Lipoprotein repeat LT40_RS16405 ac1f12cfe7bfd9690e76c06e476ddd06 131 Pfam PF03640 Secreted repeat of unknown function 83 126 1.0E-15 T 23-04-2016 IPR005297 Lipoprotein repeat LT40_RS16405 ac1f12cfe7bfd9690e76c06e476ddd06 131 PANTHER PTHR39335 23 131 2.1E-34 T 23-04-2016 LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 SUPERFAMILY SSF52540 38 275 2.78E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 121 136 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 310 327 1.5E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 327 347 1.5E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 Gene3D G3DSA:1.10.8.60 231 278 1.9E-10 T 23-04-2016 LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 SMART SM00382 54 207 1.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 58 71 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 Pfam PF02954 Bacterial regulatory protein, Fis family 313 343 4.7E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 SUPERFAMILY SSF46689 293 346 7.53E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 PANTHER PTHR32071:SF5 37 355 5.4E-120 T 23-04-2016 LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 Gene3D G3DSA:3.40.50.300 38 207 1.3E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 Gene3D G3DSA:1.10.10.60 308 345 4.6E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 PANTHER PTHR32071 37 355 5.4E-120 T 23-04-2016 LT40_RS08540 4823bfa6014830a414d7fcc162988ddd 361 Pfam PF00158 Sigma-54 interaction domain 38 198 2.4E-60 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS18715 632c6814e1b684e97a14849cbb795a87 261 SMART SM01007 30 211 8.6E-43 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS18715 632c6814e1b684e97a14849cbb795a87 261 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 31 211 2.4E-38 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS18715 632c6814e1b684e97a14849cbb795a87 261 Gene3D G3DSA:3.40.225.10 26 233 1.0E-51 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS18715 632c6814e1b684e97a14849cbb795a87 261 SUPERFAMILY SSF53639 22 236 1.94E-55 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS18715 632c6814e1b684e97a14849cbb795a87 261 PANTHER PTHR10672 22 235 6.7E-70 T 23-04-2016 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 211 318 4.6E-15 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 SUPERFAMILY SSF55957 435 546 8.37E-20 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 Gene3D G3DSA:3.30.310.50 468 545 3.1E-28 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 Gene3D G3DSA:3.40.120.10 227 311 1.5E-41 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 487 536 4.3E-9 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 180 9.2E-34 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 PANTHER PTHR22573 18 546 1.1E-254 T 23-04-2016 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 PANTHER PTHR22573:SF52 18 546 1.1E-254 T 23-04-2016 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 Gene3D G3DSA:3.40.120.10 312 446 1.7E-31 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 545 3.7E-265 T 23-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 Gene3D G3DSA:3.40.120.10 30 226 3.1E-58 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 323 440 2.1E-28 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 SUPERFAMILY SSF53738 25 236 6.48E-50 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 141 150 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS10140 52fe274a6e70d0560bbae4f019c94d3c 546 SUPERFAMILY SSF53738 306 448 1.29E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS00600 5194b25bef5f06ead02b74a69855d4e4 236 SMART SM01144 26 218 8.4E-76 T 23-04-2016 IPR005636 DTW LT40_RS00600 5194b25bef5f06ead02b74a69855d4e4 236 PANTHER PTHR21392 1 222 1.2E-112 T 23-04-2016 LT40_RS00600 5194b25bef5f06ead02b74a69855d4e4 236 PANTHER PTHR21392:SF1 1 222 1.2E-112 T 23-04-2016 LT40_RS00600 5194b25bef5f06ead02b74a69855d4e4 236 Pfam PF03942 DTW domain 28 210 4.1E-44 T 23-04-2016 IPR005636 DTW LT40_RS04355 e511320a50033181c695795c693c3259 454 PANTHER PTHR11444:SF21 9 446 6.8E-211 T 23-04-2016 LT40_RS04355 e511320a50033181c695795c693c3259 454 PANTHER PTHR11444 9 446 6.8E-211 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS04355 e511320a50033181c695795c693c3259 454 Pfam PF10397 Adenylosuccinate lyase C-terminus 368 445 9.3E-18 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 LT40_RS04355 e511320a50033181c695795c693c3259 454 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LT40_RS04355 e511320a50033181c695795c693c3259 454 PRINTS PR00145 Argininosuccinate lyase family signature 234 258 1.3E-11 T 23-04-2016 LT40_RS04355 e511320a50033181c695795c693c3259 454 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 1.3E-11 T 23-04-2016 LT40_RS04355 e511320a50033181c695795c693c3259 454 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 1.3E-11 T 23-04-2016 LT40_RS04355 e511320a50033181c695795c693c3259 454 Gene3D G3DSA:1.10.40.30 374 446 3.0E-29 T 23-04-2016 LT40_RS04355 e511320a50033181c695795c693c3259 454 Gene3D G3DSA:1.20.200.10 107 373 1.3E-89 T 23-04-2016 LT40_RS04355 e511320a50033181c695795c693c3259 454 SUPERFAMILY SSF48557 9 448 4.56E-124 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 LT40_RS04355 e511320a50033181c695795c693c3259 454 PRINTS PR00149 Fumarate lyase superfamily signature 234 261 1.8E-26 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS04355 e511320a50033181c695795c693c3259 454 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 1.8E-26 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS04355 e511320a50033181c695795c693c3259 454 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 1.8E-26 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS04355 e511320a50033181c695795c693c3259 454 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 1.8E-26 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS04355 e511320a50033181c695795c693c3259 454 SMART SM00998 367 446 5.1E-27 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 LT40_RS04355 e511320a50033181c695795c693c3259 454 Gene3D G3DSA:1.10.275.10 13 106 1.2E-33 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal LT40_RS04355 e511320a50033181c695795c693c3259 454 Pfam PF00206 Lyase 15 304 1.9E-70 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal LT40_RS04355 e511320a50033181c695795c693c3259 454 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 9 352 2.1E-139 T 23-04-2016 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 LT40_RS19175 9e0c34da1e97fc37b54fd95526d7a731 195 Gene3D G3DSA:3.40.50.1000 69 195 1.3E-28 T 23-04-2016 IPR023214 HAD-like domain LT40_RS19175 9e0c34da1e97fc37b54fd95526d7a731 195 Gene3D G3DSA:3.40.50.1000 6 20 1.3E-28 T 23-04-2016 IPR023214 HAD-like domain LT40_RS19175 9e0c34da1e97fc37b54fd95526d7a731 195 Pfam PF13419 Haloacid dehalogenase-like hydrolase 62 170 1.5E-15 T 23-04-2016 IPR023214 HAD-like domain LT40_RS19175 9e0c34da1e97fc37b54fd95526d7a731 195 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 10 164 1.9E-11 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS19175 9e0c34da1e97fc37b54fd95526d7a731 195 PANTHER PTHR18901 1 185 1.8E-74 T 23-04-2016 LT40_RS19175 9e0c34da1e97fc37b54fd95526d7a731 195 PANTHER PTHR18901:SF25 1 185 1.8E-74 T 23-04-2016 LT40_RS19175 9e0c34da1e97fc37b54fd95526d7a731 195 SUPERFAMILY SSF56784 7 195 4.82E-35 T 23-04-2016 IPR023214 HAD-like domain LT40_RS19175 9e0c34da1e97fc37b54fd95526d7a731 195 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 170 7.7E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS05450 d36c2645eb6f175731115165d95c8cf0 288 PANTHER PTHR22911 3 288 1.1E-55 T 23-04-2016 LT40_RS05450 d36c2645eb6f175731115165d95c8cf0 288 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 12 274 7.6E-75 T 23-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 LT40_RS05450 d36c2645eb6f175731115165d95c8cf0 288 SUPERFAMILY SSF103481 177 280 4.45E-7 T 23-04-2016 LT40_RS05450 d36c2645eb6f175731115165d95c8cf0 288 PANTHER PTHR22911:SF27 3 288 1.1E-55 T 23-04-2016 LT40_RS05450 d36c2645eb6f175731115165d95c8cf0 288 SUPERFAMILY SSF103481 35 130 1.96E-9 T 23-04-2016 LT40_RS05450 d36c2645eb6f175731115165d95c8cf0 288 Pfam PF00892 EamA-like transporter family 3 128 2.0E-9 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS05450 d36c2645eb6f175731115165d95c8cf0 288 Pfam PF00892 EamA-like transporter family 138 277 7.5E-11 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS10165 e4a901abba9ec2b90fcb1d26011c37f9 553 Pfam PF07690 Major Facilitator Superfamily 40 434 2.1E-13 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS10165 e4a901abba9ec2b90fcb1d26011c37f9 553 Gene3D G3DSA:1.20.1250.20 319 442 2.6E-6 T 23-04-2016 LT40_RS10165 e4a901abba9ec2b90fcb1d26011c37f9 553 Gene3D G3DSA:1.20.1250.20 504 524 2.6E-6 T 23-04-2016 LT40_RS10165 e4a901abba9ec2b90fcb1d26011c37f9 553 PANTHER PTHR23501 8 537 1.8E-17 T 23-04-2016 LT40_RS10165 e4a901abba9ec2b90fcb1d26011c37f9 553 Gene3D G3DSA:1.20.1250.20 37 207 8.0E-6 T 23-04-2016 LT40_RS10165 e4a901abba9ec2b90fcb1d26011c37f9 553 SUPERFAMILY SSF103473 503 526 1.44E-20 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS10165 e4a901abba9ec2b90fcb1d26011c37f9 553 SUPERFAMILY SSF103473 30 222 1.44E-20 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS10165 e4a901abba9ec2b90fcb1d26011c37f9 553 SUPERFAMILY SSF103473 272 443 1.44E-20 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS11950 17c9e35b45375aa851caaf7812285b0e 230 PANTHER PTHR11019:SF97 1 63 1.8E-69 T 23-04-2016 LT40_RS11950 17c9e35b45375aa851caaf7812285b0e 230 PANTHER PTHR11019:SF97 84 223 1.8E-69 T 23-04-2016 LT40_RS11950 17c9e35b45375aa851caaf7812285b0e 230 Gene3D G3DSA:3.40.50.880 1 229 1.0E-96 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS11950 17c9e35b45375aa851caaf7812285b0e 230 Pfam PF01965 DJ-1/PfpI family 25 222 1.3E-15 T 23-04-2016 IPR002818 DJ-1/PfpI LT40_RS11950 17c9e35b45375aa851caaf7812285b0e 230 PANTHER PTHR11019 1 63 1.8E-69 T 23-04-2016 LT40_RS11950 17c9e35b45375aa851caaf7812285b0e 230 PANTHER PTHR11019 84 223 1.8E-69 T 23-04-2016 LT40_RS11950 17c9e35b45375aa851caaf7812285b0e 230 SUPERFAMILY SSF52317 1 224 8.22E-81 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS08845 1eb1e366681727f2a47aae6d5b9278eb 123 PANTHER PTHR24423:SF458 3 123 1.2E-22 T 23-04-2016 LT40_RS08845 1eb1e366681727f2a47aae6d5b9278eb 123 Gene3D G3DSA:3.40.50.2300 1 120 4.2E-27 T 23-04-2016 LT40_RS08845 1eb1e366681727f2a47aae6d5b9278eb 123 SMART SM00448 2 116 1.4E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS08845 1eb1e366681727f2a47aae6d5b9278eb 123 PANTHER PTHR24423 3 123 1.2E-22 T 23-04-2016 LT40_RS08845 1eb1e366681727f2a47aae6d5b9278eb 123 SUPERFAMILY SSF52172 2 118 2.42E-25 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS08845 1eb1e366681727f2a47aae6d5b9278eb 123 Pfam PF00072 Response regulator receiver domain 4 109 1.4E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS04970 8515cb4e33feaf5083b44df9265f67eb 151 PANTHER PTHR30558 5 151 7.8E-52 T 23-04-2016 LT40_RS04970 8515cb4e33feaf5083b44df9265f67eb 151 TIGRFAM TIGR02801 tolR: protein TolR 12 149 7.9E-42 T 23-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 LT40_RS04970 8515cb4e33feaf5083b44df9265f67eb 151 PANTHER PTHR30558:SF7 5 151 7.8E-52 T 23-04-2016 LT40_RS04970 8515cb4e33feaf5083b44df9265f67eb 151 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 149 2.2E-26 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 LT40_RS14035 6596c118a71e3e5e1d899eac5dc0c338 390 PANTHER PTHR13693 5 390 3.7E-175 T 23-04-2016 LT40_RS14035 6596c118a71e3e5e1d899eac5dc0c338 390 Gene3D G3DSA:3.90.1150.10 270 380 2.2E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS14035 6596c118a71e3e5e1d899eac5dc0c338 390 Pfam PF00155 Aminotransferase class I and II 39 378 7.1E-58 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS14035 6596c118a71e3e5e1d899eac5dc0c338 390 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 1 382 51.944 T 23-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 LT40_RS14035 6596c118a71e3e5e1d899eac5dc0c338 390 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 17 378 4.6E-148 T 23-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 LT40_RS14035 6596c118a71e3e5e1d899eac5dc0c338 390 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 LT40_RS14035 6596c118a71e3e5e1d899eac5dc0c338 390 SUPERFAMILY SSF53383 5 381 1.99E-109 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS14035 6596c118a71e3e5e1d899eac5dc0c338 390 Gene3D G3DSA:3.40.640.10 56 269 2.4E-82 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS14035 6596c118a71e3e5e1d899eac5dc0c338 390 PANTHER PTHR13693:SF53 5 390 3.7E-175 T 23-04-2016 LT40_RS13160 dbb8e7e01342813ea2b3d7b5856cb1e8 298 PANTHER PTHR30537:SF20 1 294 1.4E-158 T 23-04-2016 LT40_RS13160 dbb8e7e01342813ea2b3d7b5856cb1e8 298 Pfam PF03466 LysR substrate binding domain 89 293 3.1E-41 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS13160 dbb8e7e01342813ea2b3d7b5856cb1e8 298 Gene3D G3DSA:3.40.190.10 180 258 2.8E-22 T 23-04-2016 LT40_RS13160 dbb8e7e01342813ea2b3d7b5856cb1e8 298 SUPERFAMILY SSF53850 91 296 2.71E-40 T 23-04-2016 LT40_RS13160 dbb8e7e01342813ea2b3d7b5856cb1e8 298 Gene3D G3DSA:1.10.10.10 6 85 1.5E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13160 dbb8e7e01342813ea2b3d7b5856cb1e8 298 SUPERFAMILY SSF46785 6 113 1.25E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13160 dbb8e7e01342813ea2b3d7b5856cb1e8 298 PANTHER PTHR30537 1 294 1.4E-158 T 23-04-2016 LT40_RS13160 dbb8e7e01342813ea2b3d7b5856cb1e8 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.4E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS13160 dbb8e7e01342813ea2b3d7b5856cb1e8 298 Gene3D G3DSA:3.40.190.10 93 179 4.7E-22 T 23-04-2016 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PIRSF PIRSF037495 1 416 7.3E-106 T 23-04-2016 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 4.5E-10 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 163 4.5E-10 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 100 108 4.5E-10 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 4.5E-10 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 Gene3D G3DSA:3.50.50.60 1 104 4.9E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PANTHER PTHR22912 1 320 2.0E-90 T 23-04-2016 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 288 8.6E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 Gene3D G3DSA:3.50.50.60 105 302 8.9E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 SUPERFAMILY SSF51905 1 160 2.85E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 SUPERFAMILY SSF51905 193 307 2.85E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 2.0E-17 T 23-04-2016 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 2.0E-17 T 23-04-2016 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.0E-17 T 23-04-2016 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.0E-17 T 23-04-2016 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 2.0E-17 T 23-04-2016 LT40_RS08190 e84d7b2183b3606c3609ddad2bde8eb7 418 PANTHER PTHR22912:SF141 1 320 2.0E-90 T 23-04-2016 LT40_RS03925 9ba4b6ef02c6d3503acb0f27c96181ea 346 Pfam PF00248 Aldo/keto reductase family 16 337 1.8E-63 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS03925 9ba4b6ef02c6d3503acb0f27c96181ea 346 Gene3D G3DSA:3.20.20.100 1 343 1.0E-101 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS03925 9ba4b6ef02c6d3503acb0f27c96181ea 346 PRINTS PR00069 Aldo-keto reductase signature 116 134 1.8E-7 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS03925 9ba4b6ef02c6d3503acb0f27c96181ea 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 1.8E-7 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS03925 9ba4b6ef02c6d3503acb0f27c96181ea 346 PANTHER PTHR11732 1 139 4.8E-178 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS03925 9ba4b6ef02c6d3503acb0f27c96181ea 346 PANTHER PTHR11732 157 346 4.8E-178 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS03925 9ba4b6ef02c6d3503acb0f27c96181ea 346 SUPERFAMILY SSF51430 1 344 2.75E-106 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS03925 9ba4b6ef02c6d3503acb0f27c96181ea 346 PANTHER PTHR11732:SF112 1 139 4.8E-178 T 23-04-2016 LT40_RS03925 9ba4b6ef02c6d3503acb0f27c96181ea 346 PANTHER PTHR11732:SF112 157 346 4.8E-178 T 23-04-2016 LT40_RS07580 c61acbdb890e6c355fd4f1f987bedeed 462 Gene3D G3DSA:3.40.50.410 255 265 1.7E-8 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS07580 c61acbdb890e6c355fd4f1f987bedeed 462 Gene3D G3DSA:3.40.50.410 299 454 1.7E-8 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS07580 c61acbdb890e6c355fd4f1f987bedeed 462 Pfam PF13519 von Willebrand factor type A domain 256 390 6.2E-7 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS07580 c61acbdb890e6c355fd4f1f987bedeed 462 SUPERFAMILY SSF53300 299 454 2.05E-15 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS07580 c61acbdb890e6c355fd4f1f987bedeed 462 SUPERFAMILY SSF53300 255 265 2.05E-15 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS16410 bb28346b6c4b1536624990e30a6dae53 296 PANTHER PTHR11048 3 296 2.6E-91 T 23-04-2016 LT40_RS16410 bb28346b6c4b1536624990e30a6dae53 296 PANTHER PTHR11048:SF7 3 296 2.6E-91 T 23-04-2016 LT40_RS16410 bb28346b6c4b1536624990e30a6dae53 296 Pfam PF01040 UbiA prenyltransferase family 34 278 2.9E-65 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 LT40_RS16410 bb28346b6c4b1536624990e30a6dae53 296 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 11 294 29.927 T 23-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 LT40_RS16410 bb28346b6c4b1536624990e30a6dae53 296 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 18 293 5.9E-104 T 23-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 LT40_RS17430 3aac35d92b0199dfa7c77c5d9a78d40a 393 Gene3D G3DSA:3.40.50.300 37 268 2.7E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17430 3aac35d92b0199dfa7c77c5d9a78d40a 393 Pfam PF00005 ABC transporter 44 195 5.3E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS17430 3aac35d92b0199dfa7c77c5d9a78d40a 393 SUPERFAMILY SSF52540 33 274 1.51E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17430 3aac35d92b0199dfa7c77c5d9a78d40a 393 SMART SM00382 52 253 3.6E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS17430 3aac35d92b0199dfa7c77c5d9a78d40a 393 PANTHER PTHR24220:SF374 29 317 1.1E-158 T 23-04-2016 LT40_RS17430 3aac35d92b0199dfa7c77c5d9a78d40a 393 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS17430 3aac35d92b0199dfa7c77c5d9a78d40a 393 PANTHER PTHR24220 29 317 1.1E-158 T 23-04-2016 LT40_RS17430 3aac35d92b0199dfa7c77c5d9a78d40a 393 TIGRFAM TIGR03415 ABC_choXWV_ATP: choline ABC transporter, ATP-binding protein 4 390 4.1E-185 T 23-04-2016 IPR022473 ABC transporter, Choline, ATP-binding subunit GO:0015220|GO:0015871|GO:0055052 LT40_RS10545 336d5e77ec95594080f274e4af957257 331 SUPERFAMILY SSF161098 109 314 1.57E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10545 336d5e77ec95594080f274e4af957257 331 Gene3D G3DSA:1.10.3720.10 108 319 9.0E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10545 336d5e77ec95594080f274e4af957257 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 328 2.7E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10545 336d5e77ec95594080f274e4af957257 331 PANTHER PTHR30465 3 329 1.0E-84 T 23-04-2016 LT40_RS10545 336d5e77ec95594080f274e4af957257 331 PANTHER PTHR30465:SF0 3 329 1.0E-84 T 23-04-2016 LT40_RS02740 331f7b5c14772cf29795642f4761d418 528 PANTHER PTHR30365:SF0 1 312 2.9E-257 T 23-04-2016 LT40_RS02740 331f7b5c14772cf29795642f4761d418 528 PANTHER PTHR30365:SF0 378 522 2.9E-257 T 23-04-2016 LT40_RS02740 331f7b5c14772cf29795642f4761d418 528 PANTHER PTHR30365 1 312 2.9E-257 T 23-04-2016 LT40_RS02740 331f7b5c14772cf29795642f4761d418 528 PANTHER PTHR30365 378 522 2.9E-257 T 23-04-2016 LT40_RS02740 331f7b5c14772cf29795642f4761d418 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 503 1.3E-173 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 Gene3D G3DSA:3.40.50.720 9 253 9.7E-88 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 SUPERFAMILY SSF51735 14 253 1.25E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 2.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 2.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 2.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 PANTHER PTHR24322 20 144 1.2E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 PANTHER PTHR24322 160 192 1.2E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 251 3.4E-66 T 23-04-2016 LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 3.4E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.4E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.4E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 3.4E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 3.4E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08530 de8bc4362ee7525cf706f7eb0c12f822 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.4E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS03420 233a52a8260b78e55f986a2221b7fca0 182 Pfam PF05433 Glycine zipper 2TM domain 72 113 4.2E-10 T 23-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 LT40_RS03420 233a52a8260b78e55f986a2221b7fca0 182 PANTHER PTHR35603:SF2 1 175 4.7E-82 T 23-04-2016 LT40_RS03420 233a52a8260b78e55f986a2221b7fca0 182 PANTHER PTHR35603 1 175 4.7E-82 T 23-04-2016 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 Gene3D G3DSA:3.90.800.10 72 170 7.0E-21 T 23-04-2016 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 5.1E-13 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 5.1E-13 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 5.1E-13 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 5.1E-13 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 5.1E-13 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 Gene3D G3DSA:3.40.50.620 6 71 3.2E-41 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 Gene3D G3DSA:3.40.50.620 172 221 3.2E-41 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 PANTHER PTHR11451 5 221 5.8E-110 T 23-04-2016 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 PANTHER PTHR11451 244 260 5.8E-110 T 23-04-2016 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 SUPERFAMILY SSF52374 6 287 4.29E-86 T 23-04-2016 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 PANTHER PTHR11451:SF35 5 221 5.8E-110 T 23-04-2016 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 PANTHER PTHR11451:SF35 244 260 5.8E-110 T 23-04-2016 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 290 43.227 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 231 1.2E-43 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS12800 f8d4b25120bede0d8111388c3094b128 297 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 270 1.0E-111 T 23-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 LT40_RS06225 bf753d7fbedb5030c4a092e63d351198 315 Pfam PF08907 Domain of unknown function (DUF1853) 20 305 7.3E-100 T 23-04-2016 IPR015003 Protein of unknown function DUF1853 LT40_RS15165 3eb7f891ac1beb5551bdac1f4cafb9ad 350 Pfam PF13416 Bacterial extracellular solute-binding protein 61 306 5.1E-34 T 23-04-2016 LT40_RS15165 3eb7f891ac1beb5551bdac1f4cafb9ad 350 Gene3D G3DSA:3.40.190.10 144 285 3.9E-34 T 23-04-2016 LT40_RS15165 3eb7f891ac1beb5551bdac1f4cafb9ad 350 PANTHER PTHR30222:SF2 4 346 2.9E-111 T 23-04-2016 LT40_RS15165 3eb7f891ac1beb5551bdac1f4cafb9ad 350 PANTHER PTHR30222 4 346 2.9E-111 T 23-04-2016 LT40_RS15165 3eb7f891ac1beb5551bdac1f4cafb9ad 350 Gene3D G3DSA:3.40.190.10 44 143 5.6E-11 T 23-04-2016 LT40_RS15165 3eb7f891ac1beb5551bdac1f4cafb9ad 350 SUPERFAMILY SSF53850 27 333 6.42E-58 T 23-04-2016 LT40_RS05685 0c325b2d8cc8e3a02d3479167efa09d8 120 SUPERFAMILY SSF50022 10 118 9.76E-33 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS05685 0c325b2d8cc8e3a02d3479167efa09d8 120 Pfam PF13806 Rieske-like [2Fe-2S] domain 11 117 3.6E-33 T 23-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 LT40_RS05685 0c325b2d8cc8e3a02d3479167efa09d8 120 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 11 117 1.7E-29 T 23-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 LT40_RS05685 0c325b2d8cc8e3a02d3479167efa09d8 120 Gene3D G3DSA:2.102.10.10 10 118 1.6E-35 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS05685 0c325b2d8cc8e3a02d3479167efa09d8 120 PANTHER PTHR40562 5 113 1.2E-24 T 23-04-2016 LT40_RS06420 00d8e5c1072671e782a361a6c0986032 265 SMART SM00382 28 224 1.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS06420 00d8e5c1072671e782a361a6c0986032 265 Pfam PF00005 ABC transporter 19 174 6.6E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS06420 00d8e5c1072671e782a361a6c0986032 265 PANTHER PTHR24220 4 243 4.0E-79 T 23-04-2016 LT40_RS06420 00d8e5c1072671e782a361a6c0986032 265 PANTHER PTHR24220:SF408 4 243 4.0E-79 T 23-04-2016 LT40_RS06420 00d8e5c1072671e782a361a6c0986032 265 Gene3D G3DSA:3.40.50.300 3 237 2.1E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06420 00d8e5c1072671e782a361a6c0986032 265 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS06420 00d8e5c1072671e782a361a6c0986032 265 SUPERFAMILY SSF52540 7 237 9.61E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00810 e70e4524bb6c6c62a672b2aa19ca3cb0 92 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 3.2E-15 T 23-04-2016 IPR009525 Protein of unknown function DUF1145 LT40_RS00810 e70e4524bb6c6c62a672b2aa19ca3cb0 92 PANTHER PTHR38775 2 92 6.5E-18 T 23-04-2016 LT40_RS00810 e70e4524bb6c6c62a672b2aa19ca3cb0 92 PANTHER PTHR38775:SF1 2 92 6.5E-18 T 23-04-2016 LT40_RS07770 a0e0d006bdad789ee8431a70472cbb66 441 SMART SM00382 163 344 2.5E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS07770 a0e0d006bdad789ee8431a70472cbb66 441 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 351 360 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS07770 a0e0d006bdad789ee8431a70472cbb66 441 SUPERFAMILY SSF52540 97 366 2.54E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07770 a0e0d006bdad789ee8431a70472cbb66 441 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 30 93 1.5E-6 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS07770 a0e0d006bdad789ee8431a70472cbb66 441 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 360 7.2E-73 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS07770 a0e0d006bdad789ee8431a70472cbb66 441 Gene3D G3DSA:3.40.50.300 97 362 2.0E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07770 a0e0d006bdad789ee8431a70472cbb66 441 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 23 440 4.0E-153 T 23-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS07770 a0e0d006bdad789ee8431a70472cbb66 441 PANTHER PTHR15184 2 439 7.7E-194 T 23-04-2016 LT40_RS07770 a0e0d006bdad789ee8431a70472cbb66 441 PANTHER PTHR15184:SF48 2 439 7.7E-194 T 23-04-2016 LT40_RS16280 9d8216381fcfb2a96baac5030e19fd9c 607 Gene3D G3DSA:2.40.50.100 533 606 2.7E-23 T 23-04-2016 LT40_RS16280 9d8216381fcfb2a96baac5030e19fd9c 607 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 12 602 9.1E-252 T 23-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 LT40_RS16280 9d8216381fcfb2a96baac5030e19fd9c 607 SUPERFAMILY SSF51569 5 306 5.13E-91 T 23-04-2016 LT40_RS16280 9d8216381fcfb2a96baac5030e19fd9c 607 Pfam PF02436 Conserved carboxylase domain 297 488 3.6E-58 T 23-04-2016 IPR003379 Carboxylase, conserved domain LT40_RS16280 9d8216381fcfb2a96baac5030e19fd9c 607 PANTHER PTHR18866 8 606 9.1E-243 T 23-04-2016 LT40_RS16280 9d8216381fcfb2a96baac5030e19fd9c 607 SUPERFAMILY SSF89000 302 452 1.77E-51 T 23-04-2016 LT40_RS16280 9d8216381fcfb2a96baac5030e19fd9c 607 SUPERFAMILY SSF51230 532 606 6.94E-21 T 23-04-2016 IPR011053 Single hybrid motif LT40_RS16280 9d8216381fcfb2a96baac5030e19fd9c 607 Pfam PF00682 HMGL-like 11 272 1.9E-48 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 LT40_RS16280 9d8216381fcfb2a96baac5030e19fd9c 607 Pfam PF00364 Biotin-requiring enzyme 540 605 6.2E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment LT40_RS16280 9d8216381fcfb2a96baac5030e19fd9c 607 Gene3D G3DSA:3.20.20.70 7 288 2.6E-117 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS16280 9d8216381fcfb2a96baac5030e19fd9c 607 PANTHER PTHR18866:SF109 8 606 9.1E-243 T 23-04-2016 LT40_RS18785 420dd55b6d780058bd2dc16c5a8a6e4d 423 PANTHER PTHR11063:SF8 1 421 1.9E-177 T 23-04-2016 LT40_RS18785 420dd55b6d780058bd2dc16c5a8a6e4d 423 SUPERFAMILY SSF53720 8 418 8.64E-120 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS18785 420dd55b6d780058bd2dc16c5a8a6e4d 423 Gene3D G3DSA:3.40.605.10 377 418 4.2E-103 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS18785 420dd55b6d780058bd2dc16c5a8a6e4d 423 Gene3D G3DSA:3.40.605.10 3 227 4.2E-103 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS18785 420dd55b6d780058bd2dc16c5a8a6e4d 423 Gene3D G3DSA:3.40.309.10 229 376 2.4E-39 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS18785 420dd55b6d780058bd2dc16c5a8a6e4d 423 Pfam PF00171 Aldehyde dehydrogenase family 14 285 5.4E-15 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS18785 420dd55b6d780058bd2dc16c5a8a6e4d 423 PIRSF PIRSF000151 1 419 1.1E-177 T 23-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LT40_RS18785 420dd55b6d780058bd2dc16c5a8a6e4d 423 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 8 418 41.605 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LT40_RS18785 420dd55b6d780058bd2dc16c5a8a6e4d 423 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 23-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LT40_RS18785 420dd55b6d780058bd2dc16c5a8a6e4d 423 PANTHER PTHR11063 1 421 1.9E-177 T 23-04-2016 LT40_RS18785 420dd55b6d780058bd2dc16c5a8a6e4d 423 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 407 1.3E-147 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LT40_RS11370 2edd1c09d9872b756fba2b9b5969fdee 165 Gene3D G3DSA:3.40.30.10 85 163 6.8E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS11370 2edd1c09d9872b756fba2b9b5969fdee 165 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 21 164 7.8E-50 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 LT40_RS11370 2edd1c09d9872b756fba2b9b5969fdee 165 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 122 140 - T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 LT40_RS11370 2edd1c09d9872b756fba2b9b5969fdee 165 SUPERFAMILY SSF52833 14 164 2.8E-48 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS11370 2edd1c09d9872b756fba2b9b5969fdee 165 PANTHER PTHR10371 1 164 4.0E-107 T 23-04-2016 LT40_RS11370 2edd1c09d9872b756fba2b9b5969fdee 165 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 22 164 6.8E-50 T 23-04-2016 LT40_RS11370 2edd1c09d9872b756fba2b9b5969fdee 165 PANTHER PTHR10371:SF7 1 164 4.0E-107 T 23-04-2016 LT40_RS11370 2edd1c09d9872b756fba2b9b5969fdee 165 PIRSF PIRSF000216 2 165 1.4E-53 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 LT40_RS04540 c0cc96ba70a6e31f535dc4ad6c90ef3a 370 PANTHER PTHR11941:SF53 264 337 1.1E-94 T 23-04-2016 LT40_RS04540 c0cc96ba70a6e31f535dc4ad6c90ef3a 370 PANTHER PTHR11941:SF53 15 193 1.1E-94 T 23-04-2016 LT40_RS04540 c0cc96ba70a6e31f535dc4ad6c90ef3a 370 Gene3D G3DSA:3.90.226.10 269 338 9.8E-53 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS04540 c0cc96ba70a6e31f535dc4ad6c90ef3a 370 Gene3D G3DSA:3.90.226.10 12 204 9.8E-53 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS04540 c0cc96ba70a6e31f535dc4ad6c90ef3a 370 SUPERFAMILY SSF52096 269 338 5.94E-62 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS04540 c0cc96ba70a6e31f535dc4ad6c90ef3a 370 SUPERFAMILY SSF52096 8 198 5.94E-62 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS04540 c0cc96ba70a6e31f535dc4ad6c90ef3a 370 Pfam PF16113 Enoyl-CoA hydratase/isomerase 16 354 8.8E-110 T 23-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 LT40_RS04540 c0cc96ba70a6e31f535dc4ad6c90ef3a 370 PANTHER PTHR11941 264 337 1.1E-94 T 23-04-2016 LT40_RS04540 c0cc96ba70a6e31f535dc4ad6c90ef3a 370 PANTHER PTHR11941 15 193 1.1E-94 T 23-04-2016 LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 Gene3D G3DSA:3.90.1170.50 25 146 1.4E-38 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 Gene3D G3DSA:3.30.365.10 182 288 2.2E-32 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 SMART SM01008 39 146 3.6E-46 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 Gene3D G3DSA:3.30.365.10 458 614 1.5E-52 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 SUPERFAMILY SSF56003 146 780 3.66E-202 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 Gene3D G3DSA:3.30.365.10 290 365 2.6E-23 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 Gene3D G3DSA:3.30.365.10 147 181 2.6E-23 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 PANTHER PTHR11908:SF66 23 784 0.0 T 23-04-2016 LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 SUPERFAMILY SSF54665 21 147 6.67E-40 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 Gene3D G3DSA:3.30.365.10 624 780 3.4E-85 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 Gene3D G3DSA:3.30.365.10 366 457 3.4E-85 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 167 709 1.5E-202 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 39 146 4.9E-24 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 PANTHER PTHR11908 23 784 0.0 T 23-04-2016 LT40_RS08970 47e4a8bcb39383ea356a48c70c6fa797 791 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 26 781 0.0 T 23-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 Pfam PF00106 short chain dehydrogenase 6 192 2.4E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 Gene3D G3DSA:3.40.50.720 3 196 2.4E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.0E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.0E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.0E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.0E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 SUPERFAMILY SSF51735 2 212 6.58E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 PANTHER PTHR24322 149 181 8.8E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 PANTHER PTHR24322 10 133 8.8E-38 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS07880 ea2209b7a4c42773b0b071c80b7b5fe5 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 181 0.0035 T 23-04-2016 LT40_RS20190 91de8153f7b2c1c8fdcfe9f2b78c5dc1 259 Pfam PF03883 Protein of unknown function (DUF328) 1 243 5.7E-90 T 23-04-2016 IPR005583 Peroxide stress protein YaaA LT40_RS20190 91de8153f7b2c1c8fdcfe9f2b78c5dc1 259 PANTHER PTHR30283:SF3 2 255 6.5E-122 T 23-04-2016 LT40_RS20190 91de8153f7b2c1c8fdcfe9f2b78c5dc1 259 PANTHER PTHR30283 2 255 6.5E-122 T 23-04-2016 LT40_RS20190 91de8153f7b2c1c8fdcfe9f2b78c5dc1 259 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.107 T 23-04-2016 IPR005583 Peroxide stress protein YaaA LT40_RS18035 4386ad2073e25444714180bdeefabe23 117 SUPERFAMILY SSF55620 2 115 2.45E-34 T 23-04-2016 LT40_RS18035 4386ad2073e25444714180bdeefabe23 117 TIGRFAM TIGR00526 folB_dom: FolB domain 2 115 2.1E-30 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS18035 4386ad2073e25444714180bdeefabe23 117 PANTHER PTHR20941 2 117 1.3E-28 T 23-04-2016 LT40_RS18035 4386ad2073e25444714180bdeefabe23 117 SMART SM00905 4 114 1.5E-47 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS18035 4386ad2073e25444714180bdeefabe23 117 Gene3D G3DSA:3.30.1130.10 2 114 1.4E-38 T 23-04-2016 LT40_RS18035 4386ad2073e25444714180bdeefabe23 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 3.6E-31 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS18035 4386ad2073e25444714180bdeefabe23 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 5.8E-24 T 23-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS15190 c9b18694b7f6b8d12fd01dec1c54fbae 430 Gene3D G3DSA:3.90.1150.10 7 63 2.5E-39 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS15190 c9b18694b7f6b8d12fd01dec1c54fbae 430 Gene3D G3DSA:3.90.1150.10 324 427 2.5E-39 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS15190 c9b18694b7f6b8d12fd01dec1c54fbae 430 SUPERFAMILY SSF53383 24 426 1.28E-133 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS15190 c9b18694b7f6b8d12fd01dec1c54fbae 430 PANTHER PTHR11986 9 425 1.2E-181 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS15190 c9b18694b7f6b8d12fd01dec1c54fbae 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS15190 c9b18694b7f6b8d12fd01dec1c54fbae 430 PANTHER PTHR11986:SF17 9 425 1.2E-181 T 23-04-2016 LT40_RS15190 c9b18694b7f6b8d12fd01dec1c54fbae 430 Pfam PF00202 Aminotransferase class-III 28 425 3.1E-128 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS15190 c9b18694b7f6b8d12fd01dec1c54fbae 430 Gene3D G3DSA:3.40.640.10 64 321 7.2E-85 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS15190 c9b18694b7f6b8d12fd01dec1c54fbae 430 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 15 426 2.5E-161 T 23-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 LT40_RS20305 ce3b3a47b943feac52cfc5df903d2a4c 184 PANTHER PTHR22769 1 179 8.1E-75 T 23-04-2016 LT40_RS20305 ce3b3a47b943feac52cfc5df903d2a4c 184 Gene3D G3DSA:3.90.79.10 36 164 2.2E-32 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS20305 ce3b3a47b943feac52cfc5df903d2a4c 184 Pfam PF00293 NUDIX domain 39 109 1.5E-12 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LT40_RS20305 ce3b3a47b943feac52cfc5df903d2a4c 184 Pfam PF14803 Nudix N-terminal 2 35 8.6E-17 T 23-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- LT40_RS20305 ce3b3a47b943feac52cfc5df903d2a4c 184 Gene3D G3DSA:2.20.70.10 1 35 7.6E-19 T 23-04-2016 LT40_RS20305 ce3b3a47b943feac52cfc5df903d2a4c 184 PANTHER PTHR22769:SF17 1 179 8.1E-75 T 23-04-2016 LT40_RS20305 ce3b3a47b943feac52cfc5df903d2a4c 184 SUPERFAMILY SSF55811 2 162 5.15E-39 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS10230 cc0b102c7c4a205fe0e88b8aeb9f1aba 122 Pfam PF06961 Protein of unknown function (DUF1294) 38 92 8.4E-22 T 23-04-2016 IPR010718 Protein of unknown function DUF1294 LT40_RS10230 cc0b102c7c4a205fe0e88b8aeb9f1aba 122 PANTHER PTHR12962 30 112 1.5E-25 T 23-04-2016 LT40_RS10230 cc0b102c7c4a205fe0e88b8aeb9f1aba 122 PANTHER PTHR12962:SF1 30 112 1.5E-25 T 23-04-2016 LT40_RS12255 dcc59d8e9d0b6759f1c773dc4df2a47d 294 Pfam PF00892 EamA-like transporter family 3 139 3.2E-6 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS12255 dcc59d8e9d0b6759f1c773dc4df2a47d 294 SUPERFAMILY SSF103481 205 283 4.97E-5 T 23-04-2016 LT40_RS12255 dcc59d8e9d0b6759f1c773dc4df2a47d 294 SUPERFAMILY SSF103481 36 140 5.1E-7 T 23-04-2016 LT40_RS12255 dcc59d8e9d0b6759f1c773dc4df2a47d 294 TIGRFAM TIGR00688 rarD: protein RarD 3 254 1.1E-55 T 23-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 LT40_RS12255 dcc59d8e9d0b6759f1c773dc4df2a47d 294 PANTHER PTHR22911:SF57 1 292 1.2E-86 T 23-04-2016 LT40_RS12255 dcc59d8e9d0b6759f1c773dc4df2a47d 294 PANTHER PTHR22911 1 292 1.2E-86 T 23-04-2016 LT40_RS01855 715ccbf3b90d23417af8082459da4904 357 SUPERFAMILY SSF51569 8 349 2.2E-134 T 23-04-2016 LT40_RS01855 715ccbf3b90d23417af8082459da4904 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 349 1.8E-151 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LT40_RS01855 715ccbf3b90d23417af8082459da4904 357 PIRSF PIRSF001361 2 355 3.5E-157 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LT40_RS01855 715ccbf3b90d23417af8082459da4904 357 PANTHER PTHR21225 6 350 1.6E-217 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LT40_RS01855 715ccbf3b90d23417af8082459da4904 357 Gene3D G3DSA:3.20.20.70 11 351 4.3E-148 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS01855 715ccbf3b90d23417af8082459da4904 357 Pfam PF00793 DAHP synthetase I family 45 340 3.4E-94 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LT40_RS04260 e1bd28d0fb233f6b9eedc1ef739f7547 256 PANTHER PTHR10434:SF8 3 191 8.6E-59 T 23-04-2016 LT40_RS04260 e1bd28d0fb233f6b9eedc1ef739f7547 256 PANTHER PTHR10434:SF8 208 245 8.6E-59 T 23-04-2016 LT40_RS04260 e1bd28d0fb233f6b9eedc1ef739f7547 256 PANTHER PTHR10434 3 191 8.6E-59 T 23-04-2016 LT40_RS04260 e1bd28d0fb233f6b9eedc1ef739f7547 256 PANTHER PTHR10434 208 245 8.6E-59 T 23-04-2016 LT40_RS04260 e1bd28d0fb233f6b9eedc1ef739f7547 256 SUPERFAMILY SSF69593 23 184 4.71E-25 T 23-04-2016 LT40_RS04260 e1bd28d0fb233f6b9eedc1ef739f7547 256 SMART SM00563 72 183 7.9E-30 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LT40_RS04260 e1bd28d0fb233f6b9eedc1ef739f7547 256 Gene3D G3DSA:3.40.1130.10 71 180 2.2E-6 T 23-04-2016 LT40_RS04260 e1bd28d0fb233f6b9eedc1ef739f7547 256 Pfam PF01553 Acyltransferase 61 180 7.7E-20 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LT40_RS05145 3c8b971add0e9a0213e4dcd9737a1af6 373 Gene3D G3DSA:1.10.540.10 9 88 1.6E-16 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS05145 3c8b971add0e9a0213e4dcd9737a1af6 373 PANTHER PTHR10909 19 354 4.2E-55 T 23-04-2016 LT40_RS05145 3c8b971add0e9a0213e4dcd9737a1af6 373 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 210 9.7E-14 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LT40_RS05145 3c8b971add0e9a0213e4dcd9737a1af6 373 PANTHER PTHR10909:SF152 19 354 4.2E-55 T 23-04-2016 LT40_RS05145 3c8b971add0e9a0213e4dcd9737a1af6 373 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 245 357 4.8E-9 T 23-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain LT40_RS05145 3c8b971add0e9a0213e4dcd9737a1af6 373 Gene3D G3DSA:2.40.110.10 128 211 5.5E-30 T 23-04-2016 LT40_RS05145 3c8b971add0e9a0213e4dcd9737a1af6 373 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 81 7.8E-9 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS05145 3c8b971add0e9a0213e4dcd9737a1af6 373 SUPERFAMILY SSF47203 235 372 4.99E-18 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS05145 3c8b971add0e9a0213e4dcd9737a1af6 373 Gene3D G3DSA:1.20.140.10 212 372 4.3E-34 T 23-04-2016 LT40_RS05145 3c8b971add0e9a0213e4dcd9737a1af6 373 SUPERFAMILY SSF56645 10 218 1.7E-44 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 Gene3D G3DSA:3.30.450.20 62 181 1.0E-28 T 23-04-2016 LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 70 194 1.7E-17 T 23-04-2016 IPR000014 PAS domain LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 Pfam PF00990 Diguanylate cyclase, GGDEF domain 198 354 2.1E-43 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 SUPERFAMILY SSF55073 203 361 2.04E-45 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 Pfam PF13426 PAS domain 84 185 2.8E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 SMART SM00052 369 615 5.2E-116 T 23-04-2016 IPR001633 EAL domain LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 Gene3D G3DSA:3.20.20.450 373 619 1.2E-99 T 23-04-2016 IPR001633 EAL domain LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 Gene3D G3DSA:3.30.70.270 199 367 8.3E-54 T 23-04-2016 LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 PANTHER PTHR10799 131 469 6.6E-85 T 23-04-2016 LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 SMART SM00091 73 139 2.4E-9 T 23-04-2016 IPR000014 PAS domain LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 SMART SM00267 187 359 2.0E-59 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 194 357 6.0E-39 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 SUPERFAMILY SSF55785 61 185 8.03E-29 T 23-04-2016 IPR000014 PAS domain LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 Pfam PF00563 EAL domain 375 610 4.7E-76 T 23-04-2016 IPR001633 EAL domain LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 SUPERFAMILY SSF141868 376 617 6.41E-88 T 23-04-2016 IPR001633 EAL domain LT40_RS15370 dc95edec1e9f926a4ef2a434e19d972f 624 PANTHER PTHR10799:SF710 131 469 6.6E-85 T 23-04-2016 LT40_RS05770 dd28b7188aa531157c16f21604a8bee8 185 PIRSF PIRSF000232 1 185 6.0E-65 T 23-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- LT40_RS05770 dd28b7188aa531157c16f21604a8bee8 185 SUPERFAMILY SSF55469 1 181 4.97E-40 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 LT40_RS05770 dd28b7188aa531157c16f21604a8bee8 185 Gene3D G3DSA:3.40.109.10 1 182 2.4E-38 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 LT40_RS05770 dd28b7188aa531157c16f21604a8bee8 185 PANTHER PTHR23026 1 172 1.7E-70 T 23-04-2016 LT40_RS05770 dd28b7188aa531157c16f21604a8bee8 185 PANTHER PTHR23026:SF107 1 172 1.7E-70 T 23-04-2016 LT40_RS05770 dd28b7188aa531157c16f21604a8bee8 185 Pfam PF00881 Nitroreductase family 17 162 5.8E-22 T 23-04-2016 IPR029479 Nitroreductase LT40_RS20665 0a154c91b2bea59502355e6049ea0c8d 324 PANTHER PTHR10314:SF110 3 321 1.7E-153 T 23-04-2016 LT40_RS20665 0a154c91b2bea59502355e6049ea0c8d 324 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 LT40_RS20665 0a154c91b2bea59502355e6049ea0c8d 324 Gene3D G3DSA:3.40.50.1100 137 322 8.7E-72 T 23-04-2016 LT40_RS20665 0a154c91b2bea59502355e6049ea0c8d 324 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 302 4.1E-67 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS20665 0a154c91b2bea59502355e6049ea0c8d 324 Gene3D G3DSA:3.40.50.1100 38 136 3.8E-40 T 23-04-2016 LT40_RS20665 0a154c91b2bea59502355e6049ea0c8d 324 PANTHER PTHR10314 3 321 1.7E-153 T 23-04-2016 LT40_RS20665 0a154c91b2bea59502355e6049ea0c8d 324 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 313 8.9E-129 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 LT40_RS20665 0a154c91b2bea59502355e6049ea0c8d 324 SUPERFAMILY SSF53686 5 312 3.01E-100 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS20665 0a154c91b2bea59502355e6049ea0c8d 324 TIGRFAM TIGR01139 cysK: cysteine synthase A 10 313 4.0E-135 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 325 5.0E-63 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 455 1.2E-28 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 Gene3D G3DSA:3.50.50.60 5 141 3.1E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PANTHER PTHR22912 4 459 6.8E-249 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PIRSF PIRSF000350 2 459 4.0E-65 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 1.9E-51 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.9E-51 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.9E-51 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.9E-51 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 1.9E-51 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 1.9E-51 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.9E-51 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.9E-51 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 1.9E-51 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 Gene3D G3DSA:3.30.390.30 343 457 1.2E-30 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 SUPERFAMILY SSF55424 343 461 1.89E-28 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 1 464 71.049 T 23-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 Gene3D G3DSA:3.50.50.60 142 332 3.8E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 SUPERFAMILY SSF51905 4 318 6.76E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PANTHER PTHR22912:SF93 4 459 6.8E-249 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 9.1E-32 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 9.1E-32 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 9.1E-32 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 9.1E-32 T 23-04-2016 LT40_RS12110 1b950a3907bbc3c229154d66c532caf1 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 9.1E-32 T 23-04-2016 LT40_RS03170 72ba2a942a42b7f2f28235bc69970d9d 125 Gene3D G3DSA:2.40.50.100 3 122 1.9E-38 T 23-04-2016 LT40_RS03170 72ba2a942a42b7f2f28235bc69970d9d 125 SUPERFAMILY SSF51230 2 121 1.92E-31 T 23-04-2016 IPR011053 Single hybrid motif LT40_RS03170 72ba2a942a42b7f2f28235bc69970d9d 125 PANTHER PTHR11715 2 121 4.6E-48 T 23-04-2016 IPR002930 Glycine cleavage system H-protein LT40_RS03170 72ba2a942a42b7f2f28235bc69970d9d 125 Pfam PF01597 Glycine cleavage H-protein 4 121 8.3E-35 T 23-04-2016 IPR002930 Glycine cleavage system H-protein LT40_RS03170 72ba2a942a42b7f2f28235bc69970d9d 125 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 122 1.9E-38 T 23-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 LT40_RS03170 72ba2a942a42b7f2f28235bc69970d9d 125 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 1 122 25.673 T 23-04-2016 IPR002930 Glycine cleavage system H-protein LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 Hamap MF_00195 GTPase Der [der]. 2 451 37.911 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 Gene3D G3DSA:3.40.50.300 189 375 9.2E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 Gene3D G3DSA:3.40.50.300 3 169 1.2E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 SUPERFAMILY SSF52540 137 454 2.86E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 SUPERFAMILY SSF52540 4 174 2.57E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 PANTHER PTHR11649 1 448 6.7E-146 T 23-04-2016 LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 Gene3D G3DSA:3.30.300.20 376 449 2.5E-23 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 PIRSF PIRSF006485 1 456 1.9E-171 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 368 448 9.1E-27 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 448 4.6E-173 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 2.9E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 PANTHER PTHR11649:SF5 1 448 6.7E-146 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 155 1.2E-20 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 192 351 1.3E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.2E-27 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS03565 bbe7a07e13e896955e14789ac97fe10a 487 Pfam PF01926 50S ribosome-binding GTPase 194 312 2.0E-25 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS03345 8dc6889c2de340f147f0c516b21865f4 215 Gene3D G3DSA:3.40.50.880 17 211 2.1E-56 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS03345 8dc6889c2de340f147f0c516b21865f4 215 Pfam PF01965 DJ-1/PfpI family 17 191 7.7E-22 T 23-04-2016 IPR002818 DJ-1/PfpI LT40_RS03345 8dc6889c2de340f147f0c516b21865f4 215 PANTHER PTHR11019:SF58 8 207 2.3E-23 T 23-04-2016 LT40_RS03345 8dc6889c2de340f147f0c516b21865f4 215 SUPERFAMILY SSF52317 15 211 6.52E-49 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS03345 8dc6889c2de340f147f0c516b21865f4 215 PANTHER PTHR11019 8 207 2.3E-23 T 23-04-2016 LT40_RS11475 74648b6081a5ad27c8c58a6322dd993d 202 Gene3D G3DSA:1.10.101.10 137 197 8.0E-11 T 23-04-2016 IPR002477 Peptidoglycan binding-like LT40_RS11475 74648b6081a5ad27c8c58a6322dd993d 202 Pfam PF01471 Putative peptidoglycan binding domain 143 197 6.5E-9 T 23-04-2016 IPR002477 Peptidoglycan binding-like LT40_RS11475 74648b6081a5ad27c8c58a6322dd993d 202 SUPERFAMILY SSF47090 140 198 7.69E-13 T 23-04-2016 IPR002477 Peptidoglycan binding-like LT40_RS11475 74648b6081a5ad27c8c58a6322dd993d 202 TIGRFAM TIGR03979 His_Ser_Rich: His-Xaa-Ser repeat protein HxsA 2 201 2.9E-75 T 23-04-2016 IPR023928 Conserved hypothetical protein CHP03979 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 PANTHER PTHR10742 13 535 1.3E-84 T 23-04-2016 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 Gene3D G3DSA:3.90.660.10 76 149 1.1E-25 T 23-04-2016 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 Gene3D G3DSA:3.90.660.10 363 465 1.1E-25 T 23-04-2016 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 PANTHER PTHR10742:SF277 13 535 1.3E-84 T 23-04-2016 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 Gene3D G3DSA:3.50.50.60 239 359 4.3E-9 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 Gene3D G3DSA:3.50.50.60 499 544 4.3E-9 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 SUPERFAMILY SSF54373 360 474 9.16E-26 T 23-04-2016 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 Pfam PF01593 Flavin containing amine oxidoreductase 55 531 1.4E-41 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 Gene3D G3DSA:3.40.50.720 43 75 1.5E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 Gene3D G3DSA:3.40.50.720 163 187 1.5E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 SUPERFAMILY SSF51905 463 535 2.76E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 SUPERFAMILY SSF51905 46 374 2.76E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 431 446 1.1E-5 T 23-04-2016 LT40_RS17950 b1ea5853459026a47282b2b7496f69c8 560 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 47 69 1.1E-5 T 23-04-2016 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 ProSitePatterns PS00480 Citrate synthase signature. 258 270 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 375 3.9E-155 T 23-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 Pfam PF00285 Citrate synthase, C-terminal domain 11 357 1.8E-119 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 PANTHER PTHR11739 11 375 1.0E-162 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 PRINTS PR00143 Citrate synthase signature 198 226 1.7E-41 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 PRINTS PR00143 Citrate synthase signature 251 271 1.7E-41 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 PRINTS PR00143 Citrate synthase signature 126 139 1.7E-41 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 PRINTS PR00143 Citrate synthase signature 176 191 1.7E-41 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 PRINTS PR00143 Citrate synthase signature 328 342 1.7E-41 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 PRINTS PR00143 Citrate synthase signature 308 324 1.7E-41 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 Gene3D G3DSA:1.10.580.10 17 233 2.8E-78 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 PIRSF PIRSF001369 3 375 5.0E-119 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 PANTHER PTHR11739:SF12 11 375 1.0E-162 T 23-04-2016 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 SUPERFAMILY SSF48256 10 375 6.54E-127 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS11200 dbfcc81d8435b545e8b19a2d819f95e7 375 Gene3D G3DSA:1.10.230.10 234 322 5.7E-30 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain LT40_RS13340 f8c37e2e9edfc6fd39547ad1c747592a 260 SUPERFAMILY SSF51182 19 188 1.53E-20 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS13340 f8c37e2e9edfc6fd39547ad1c747592a 260 Gene3D G3DSA:2.60.120.10 20 94 2.1E-10 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS13340 f8c37e2e9edfc6fd39547ad1c747592a 260 Gene3D G3DSA:1.10.10.60 216 259 4.4E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS13340 f8c37e2e9edfc6fd39547ad1c747592a 260 Gene3D G3DSA:1.10.10.60 160 215 2.1E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS13340 f8c37e2e9edfc6fd39547ad1c747592a 260 Pfam PF02311 AraC-like ligand binding domain 36 107 5.7E-7 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LT40_RS13340 f8c37e2e9edfc6fd39547ad1c747592a 260 SUPERFAMILY SSF46689 216 259 1.03E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS13340 f8c37e2e9edfc6fd39547ad1c747592a 260 PANTHER PTHR11019:SF98 11 259 3.0E-95 T 23-04-2016 LT40_RS13340 f8c37e2e9edfc6fd39547ad1c747592a 260 PANTHER PTHR11019 11 259 3.0E-95 T 23-04-2016 LT40_RS13340 f8c37e2e9edfc6fd39547ad1c747592a 260 SMART SM00342 179 260 8.3E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS13340 f8c37e2e9edfc6fd39547ad1c747592a 260 Pfam PF12833 Helix-turn-helix domain 185 259 4.8E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS01870 182cf53ad4574dfe34a002127fcfc42f 244 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 40 235 4.6E-84 T 23-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 LT40_RS01870 182cf53ad4574dfe34a002127fcfc42f 244 PANTHER PTHR23293 6 240 6.2E-108 T 23-04-2016 LT40_RS01870 182cf53ad4574dfe34a002127fcfc42f 244 Gene3D G3DSA:3.40.50.620 4 207 7.1E-50 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS01870 182cf53ad4574dfe34a002127fcfc42f 244 SUPERFAMILY SSF52402 8 199 3.18E-44 T 23-04-2016 LT40_RS01870 182cf53ad4574dfe34a002127fcfc42f 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 19 236 3.8E-50 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 LT40_RS01870 182cf53ad4574dfe34a002127fcfc42f 244 PIRSF PIRSF000857 2 241 6.6E-81 T 23-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 LT40_RS01870 182cf53ad4574dfe34a002127fcfc42f 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 34 211 1.9E-45 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 LT40_RS01870 182cf53ad4574dfe34a002127fcfc42f 244 PANTHER PTHR23293:SF11 6 240 6.2E-108 T 23-04-2016 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 2.9E-246 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 Gene3D G3DSA:3.30.930.10 417 586 6.8E-115 T 23-04-2016 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 Gene3D G3DSA:3.30.930.10 134 278 6.8E-115 T 23-04-2016 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 SUPERFAMILY SSF50249 2 106 2.67E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 4.7E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 4.7E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 4.7E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 4.7E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 PANTHER PTHR22594:SF5 373 572 8.2E-252 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 PANTHER PTHR22594:SF5 1 299 8.2E-252 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 1.9E-111 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 Gene3D G3DSA:2.40.50.140 1 109 2.9E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 Pfam PF01336 OB-fold nucleic acid binding domain 20 100 9.5E-17 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 Pfam PF02938 GAD domain 310 409 8.5E-28 T 23-04-2016 IPR029351 GAD domain LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 Gene3D G3DSA:3.30.1360.30 279 416 3.9E-47 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 PANTHER PTHR22594 373 572 8.2E-252 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 PANTHER PTHR22594 1 299 8.2E-252 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 564 37.956 T 23-04-2016 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 SUPERFAMILY SSF55681 109 290 1.03E-105 T 23-04-2016 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 SUPERFAMILY SSF55681 422 585 1.03E-105 T 23-04-2016 LT40_RS04935 af86b78487a8a6b2b132df7105b2dd34 591 SUPERFAMILY SSF55261 291 422 4.14E-45 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 LT40_RS17620 0193889d090cc9bf1f8fe2fc0e52a7dc 1126 SUPERFAMILY SSF82861 824 908 6.02E-7 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LT40_RS17620 0193889d090cc9bf1f8fe2fc0e52a7dc 1126 SUPERFAMILY SSF82689 978 1077 2.22E-25 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LT40_RS17620 0193889d090cc9bf1f8fe2fc0e52a7dc 1126 PANTHER PTHR30347 1 1098 0.0 T 23-04-2016 LT40_RS17620 0193889d090cc9bf1f8fe2fc0e52a7dc 1126 Gene3D G3DSA:3.30.70.100 980 1064 3.2E-22 T 23-04-2016 LT40_RS17620 0193889d090cc9bf1f8fe2fc0e52a7dc 1126 Pfam PF00924 Mechanosensitive ion channel 867 1066 5.8E-56 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LT40_RS17620 0193889d090cc9bf1f8fe2fc0e52a7dc 1126 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 488 806 1.1E-101 T 23-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 LT40_RS17620 0193889d090cc9bf1f8fe2fc0e52a7dc 1126 SUPERFAMILY SSF50182 910 975 2.52E-17 T 23-04-2016 IPR010920 LSM domain LT40_RS17620 0193889d090cc9bf1f8fe2fc0e52a7dc 1126 PANTHER PTHR30347:SF2 1 1098 0.0 T 23-04-2016 LT40_RS17620 0193889d090cc9bf1f8fe2fc0e52a7dc 1126 Gene3D G3DSA:2.30.30.60 925 974 6.8E-17 T 23-04-2016 LT40_RS17620 0193889d090cc9bf1f8fe2fc0e52a7dc 1126 Pfam PF12795 Mechanosensitive ion channel porin domain 34 265 3.6E-52 T 23-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain LT40_RS17620 0193889d090cc9bf1f8fe2fc0e52a7dc 1126 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 939 973 - T 23-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 LT40_RS14520 bab195cf3c5ef9a62af923795dda4104 151 SUPERFAMILY SSF50341 12 112 3.01E-10 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS14520 bab195cf3c5ef9a62af923795dda4104 151 SMART SM00260 9 144 1.1E-4 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS14520 bab195cf3c5ef9a62af923795dda4104 151 Pfam PF01584 CheW-like domain 15 143 1.5E-10 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 Gene3D G3DSA:3.30.1160.10 89 155 6.2E-36 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 PANTHER PTHR34186:SF2 1 155 3.2E-62 T 23-04-2016 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 PIRSF PIRSF001263 3 155 6.2E-63 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 Hamap MF_00535 Cyanate hydratase [cynS]. 1 155 74.287 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 TIGRFAM TIGR00673 cynS: cyanase 1 155 3.0E-55 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 SUPERFAMILY SSF55234 88 155 5.36E-28 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 SUPERFAMILY SSF47413 3 84 1.16E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 SMART SM01116 82 155 4.4E-45 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 PANTHER PTHR34186 1 155 3.2E-62 T 23-04-2016 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 PRINTS PR01693 Cyanase signature 90 104 1.9E-31 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 PRINTS PR01693 Cyanase signature 140 150 1.9E-31 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 PRINTS PR01693 Cyanase signature 22 37 1.9E-31 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 PRINTS PR01693 Cyanase signature 108 124 1.9E-31 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 PRINTS PR01693 Cyanase signature 42 59 1.9E-31 T 23-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 Gene3D G3DSA:1.10.260.40 1 87 2.6E-31 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS08145 de9b6b486d6060cb54346f1d07b54b56 155 Pfam PF02560 Cyanate lyase C-terminal domain 87 153 9.4E-33 T 23-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 Pfam PF13533 Biotin-lipoyl like 70 101 1.2E-6 T 23-04-2016 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 PANTHER PTHR30386 28 397 3.1E-128 T 23-04-2016 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 ProSitePatterns PS00543 HlyD family secretion proteins signature. 362 384 - T 23-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 Gene3D G3DSA:2.40.50.100 67 97 2.0E-15 T 23-04-2016 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 Gene3D G3DSA:2.40.50.100 244 278 2.0E-15 T 23-04-2016 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 292 316 4.7E-36 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 75 95 4.7E-36 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 377 397 4.7E-36 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 33 56 4.7E-36 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 316 339 4.7E-36 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 259 280 4.7E-36 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 377 4.7E-36 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 Pfam PF13437 HlyD family secretion protein 246 350 3.7E-17 T 23-04-2016 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 SUPERFAMILY SSF111369 71 125 3.14E-5 T 23-04-2016 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 188 397 3.7E-64 T 23-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 LT40_RS02240 52c821e0babd6343e263941a970dba35 397 PANTHER PTHR30386:SF4 28 397 3.1E-128 T 23-04-2016 LT40_RS02650 e6d4e03b04bf2823d796997a8ee66cd0 291 Pfam PF12277 Protein of unknown function (DUF3618) 11 55 3.4E-9 T 23-04-2016 IPR022062 Protein of unknown function DUF3618 LT40_RS02650 e6d4e03b04bf2823d796997a8ee66cd0 291 Gene3D G3DSA:1.20.120.20 123 186 2.3E-4 T 23-04-2016 LT40_RS02650 e6d4e03b04bf2823d796997a8ee66cd0 291 Gene3D G3DSA:1.20.120.20 227 247 2.3E-4 T 23-04-2016 LT40_RS03780 00459a16197cb92d73462bab3400e451 154 SUPERFAMILY SSF55804 1 147 9.03E-41 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 LT40_RS03780 00459a16197cb92d73462bab3400e451 154 PANTHER PTHR30505 1 154 3.2E-66 T 23-04-2016 LT40_RS03780 00459a16197cb92d73462bab3400e451 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 14 148 9.7E-35 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LT40_RS03780 00459a16197cb92d73462bab3400e451 154 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 4 148 1.8E-54 T 23-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LT40_RS03780 00459a16197cb92d73462bab3400e451 154 PANTHER PTHR30505:SF6 1 154 3.2E-66 T 23-04-2016 LT40_RS03780 00459a16197cb92d73462bab3400e451 154 Gene3D G3DSA:3.40.930.10 1 151 1.8E-42 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- LT40_RS06535 98923e5cb297a63ecf2d4eca20513640 400 PANTHER PTHR23501 21 396 1.2E-98 T 23-04-2016 LT40_RS06535 98923e5cb297a63ecf2d4eca20513640 400 SUPERFAMILY SSF103473 21 397 1.44E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS06535 98923e5cb297a63ecf2d4eca20513640 400 Gene3D G3DSA:1.20.1250.20 23 200 2.2E-23 T 23-04-2016 LT40_RS06535 98923e5cb297a63ecf2d4eca20513640 400 Gene3D G3DSA:1.20.1250.20 216 396 2.7E-15 T 23-04-2016 LT40_RS06535 98923e5cb297a63ecf2d4eca20513640 400 PANTHER PTHR23501:SF4 21 396 1.2E-98 T 23-04-2016 LT40_RS06535 98923e5cb297a63ecf2d4eca20513640 400 Pfam PF07690 Major Facilitator Superfamily 27 330 1.3E-28 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS13085 f0b50a53fc983f811c170fe8ce3aa1d0 189 SUPERFAMILY SSF52499 10 186 1.11E-32 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS13085 f0b50a53fc983f811c170fe8ce3aa1d0 189 PANTHER PTHR11080 10 186 2.9E-35 T 23-04-2016 LT40_RS13085 f0b50a53fc983f811c170fe8ce3aa1d0 189 PANTHER PTHR11080:SF16 10 186 2.9E-35 T 23-04-2016 LT40_RS13085 f0b50a53fc983f811c170fe8ce3aa1d0 189 Gene3D G3DSA:3.40.50.850 10 186 6.5E-34 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS13085 f0b50a53fc983f811c170fe8ce3aa1d0 189 Pfam PF00857 Isochorismatase family 10 152 6.1E-23 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS11815 833b73e81046fa9b2edd157cadc4eb11 404 PANTHER PTHR10909:SF300 8 374 8.4E-56 T 23-04-2016 LT40_RS11815 833b73e81046fa9b2edd157cadc4eb11 404 Gene3D G3DSA:1.20.140.10 220 400 1.0E-51 T 23-04-2016 LT40_RS11815 833b73e81046fa9b2edd157cadc4eb11 404 SUPERFAMILY SSF56645 24 224 1.44E-33 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS11815 833b73e81046fa9b2edd157cadc4eb11 404 Gene3D G3DSA:1.10.540.10 11 101 1.0E-17 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS11815 833b73e81046fa9b2edd157cadc4eb11 404 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 247 379 1.4E-17 T 23-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain LT40_RS11815 833b73e81046fa9b2edd157cadc4eb11 404 PANTHER PTHR10909 8 374 8.4E-56 T 23-04-2016 LT40_RS11815 833b73e81046fa9b2edd157cadc4eb11 404 Gene3D G3DSA:2.40.110.10 141 219 4.9E-18 T 23-04-2016 LT40_RS11815 833b73e81046fa9b2edd157cadc4eb11 404 SUPERFAMILY SSF47203 242 389 1.92E-16 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS18625 f5daf422f5633733b5b15a57709a8d9b 80 Gene3D G3DSA:1.10.287.1040 4 76 4.8E-27 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LT40_RS18625 f5daf422f5633733b5b15a57709a8d9b 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 15.747 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LT40_RS18625 f5daf422f5633733b5b15a57709a8d9b 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 49 5.0E-19 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LT40_RS18625 f5daf422f5633733b5b15a57709a8d9b 80 PIRSF PIRSF006488 1 80 3.1E-22 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LT40_RS18625 f5daf422f5633733b5b15a57709a8d9b 80 PANTHER PTHR34137 1 77 4.1E-25 T 23-04-2016 LT40_RS18625 f5daf422f5633733b5b15a57709a8d9b 80 SUPERFAMILY SSF116842 3 70 1.31E-20 T 23-04-2016 LT40_RS18625 f5daf422f5633733b5b15a57709a8d9b 80 Pfam PF02609 Exonuclease VII small subunit 10 60 1.1E-19 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LT40_RS18625 f5daf422f5633733b5b15a57709a8d9b 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 64 9.3E-22 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LT40_RS16545 956e893f0838397abcf508a9e926ce47 529 Gene3D G3DSA:3.10.105.10 284 498 2.1E-62 T 23-04-2016 LT40_RS16545 956e893f0838397abcf508a9e926ce47 529 SUPERFAMILY SSF53850 24 527 1.6E-143 T 23-04-2016 LT40_RS16545 956e893f0838397abcf508a9e926ce47 529 PANTHER PTHR30290:SF14 24 529 8.8E-190 T 23-04-2016 LT40_RS16545 956e893f0838397abcf508a9e926ce47 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 446 1.2E-93 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS16545 956e893f0838397abcf508a9e926ce47 529 PIRSF PIRSF002741 22 529 4.6E-110 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS16545 956e893f0838397abcf508a9e926ce47 529 PANTHER PTHR30290 24 529 8.8E-190 T 23-04-2016 LT40_RS16545 956e893f0838397abcf508a9e926ce47 529 Gene3D G3DSA:3.90.76.10 32 212 9.1E-45 T 23-04-2016 LT40_RS07250 3ced07d3857bcdd1058d7f0d83a7f67a 267 SUPERFAMILY SSF141673 4 133 1.57E-31 T 23-04-2016 LT40_RS07250 3ced07d3857bcdd1058d7f0d83a7f67a 267 PANTHER PTHR14237 3 267 1.0E-89 T 23-04-2016 LT40_RS07250 3ced07d3857bcdd1058d7f0d83a7f67a 267 Pfam PF03476 MOSC N-terminal beta barrel domain 3 118 2.1E-26 T 23-04-2016 IPR005303 MOSC, N-terminal beta barrel LT40_RS07250 3ced07d3857bcdd1058d7f0d83a7f67a 267 Pfam PF03473 MOSC domain 142 264 4.2E-31 T 23-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 LT40_RS07250 3ced07d3857bcdd1058d7f0d83a7f67a 267 SUPERFAMILY SSF50800 3 51 4.19E-20 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain LT40_RS07250 3ced07d3857bcdd1058d7f0d83a7f67a 267 SUPERFAMILY SSF50800 151 266 4.19E-20 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain LT40_RS00505 f1704f4207dea55e134e10418c12d6d4 281 PANTHER PTHR21057 1 281 5.3E-209 T 23-04-2016 LT40_RS00505 f1704f4207dea55e134e10418c12d6d4 281 Pfam PF00793 DAHP synthetase I family 9 272 6.3E-75 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LT40_RS00505 f1704f4207dea55e134e10418c12d6d4 281 PANTHER PTHR21057:SF6 1 281 5.3E-209 T 23-04-2016 LT40_RS00505 f1704f4207dea55e134e10418c12d6d4 281 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 273 7.1E-116 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LT40_RS00505 f1704f4207dea55e134e10418c12d6d4 281 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 275 48.717 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LT40_RS00505 f1704f4207dea55e134e10418c12d6d4 281 SUPERFAMILY SSF51569 3 277 2.47E-102 T 23-04-2016 LT40_RS00505 f1704f4207dea55e134e10418c12d6d4 281 Gene3D G3DSA:3.20.20.70 16 277 2.2E-105 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS07515 875bfe2480a7a9735a2e02a0b746eec0 64 PANTHER PTHR33343 1 61 9.3E-23 T 23-04-2016 LT40_RS07515 875bfe2480a7a9735a2e02a0b746eec0 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.843 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LT40_RS07515 875bfe2480a7a9735a2e02a0b746eec0 64 Pfam PF01632 Ribosomal protein L35 2 61 8.4E-25 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS07515 875bfe2480a7a9735a2e02a0b746eec0 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 5.6E-26 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LT40_RS07515 875bfe2480a7a9735a2e02a0b746eec0 64 SUPERFAMILY SSF143034 2 61 2.09E-20 T 23-04-2016 LT40_RS07515 875bfe2480a7a9735a2e02a0b746eec0 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS07515 875bfe2480a7a9735a2e02a0b746eec0 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 1.53E-19 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LT40_RS07515 875bfe2480a7a9735a2e02a0b746eec0 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 1.53E-19 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LT40_RS07515 875bfe2480a7a9735a2e02a0b746eec0 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.53E-19 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 Gene3D G3DSA:3.30.930.10 105 423 8.2E-141 T 23-04-2016 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 PIRSF PIRSF001529 1 426 3.4E-177 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 419 1.1E-164 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 SUPERFAMILY SSF55681 116 420 4.52E-98 T 23-04-2016 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 424 40.5 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 6.8E-30 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 2.1E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 2.1E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 2.1E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 2.1E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 2.1E-32 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 SUPERFAMILY SSF46589 1 112 7.32E-27 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 PANTHER PTHR11778 1 425 1.3E-207 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 Gene3D G3DSA:1.10.287.40 1 104 6.7E-25 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 LT40_RS11255 633cf0fd397714ab5e42a6cffdf019bb 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 218 402 1.6E-35 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS08770 5e668251a9ffff6b5b5e7fdc0f9efd89 1103 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 735 1038 1.4E-35 T 23-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal LT40_RS08770 5e668251a9ffff6b5b5e7fdc0f9efd89 1103 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 160 225 7.5E-14 T 23-04-2016 IPR013491 Caudovirus, tape measure, N-terminal LT40_RS08770 5e668251a9ffff6b5b5e7fdc0f9efd89 1103 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 849 922 1.1E-21 T 23-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal LT40_RS13120 42caf994055a8692b658691ef402b7e6 267 PANTHER PTHR30136 15 266 3.5E-41 T 23-04-2016 LT40_RS13120 42caf994055a8692b658691ef402b7e6 267 Pfam PF09339 IclR helix-turn-helix domain 21 71 6.5E-9 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS13120 42caf994055a8692b658691ef402b7e6 267 Gene3D G3DSA:3.30.450.40 90 266 7.2E-28 T 23-04-2016 IPR029016 GAF domain-like LT40_RS13120 42caf994055a8692b658691ef402b7e6 267 Pfam PF01614 Bacterial transcriptional regulator 159 262 3.2E-11 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal LT40_RS13120 42caf994055a8692b658691ef402b7e6 267 SMART SM00346 19 110 1.2E-15 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS13120 42caf994055a8692b658691ef402b7e6 267 SUPERFAMILY SSF46785 20 91 5.68E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13120 42caf994055a8692b658691ef402b7e6 267 SUPERFAMILY SSF55781 78 266 2.75E-28 T 23-04-2016 IPR029016 GAF domain-like LT40_RS13120 42caf994055a8692b658691ef402b7e6 267 Gene3D G3DSA:1.10.10.10 18 89 1.6E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10945 76b9dae3942d93b1cb1e76d5a769bdaa 166 SUPERFAMILY SSF52833 1 163 4.32E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS10945 76b9dae3942d93b1cb1e76d5a769bdaa 166 Gene3D G3DSA:3.40.30.10 2 166 1.4E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS10945 76b9dae3942d93b1cb1e76d5a769bdaa 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 23-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 LT40_RS10945 76b9dae3942d93b1cb1e76d5a769bdaa 166 PANTHER PTHR10681:SF81 3 166 1.7E-46 T 23-04-2016 LT40_RS10945 76b9dae3942d93b1cb1e76d5a769bdaa 166 Pfam PF08534 Redoxin 19 162 7.3E-26 T 23-04-2016 IPR013740 Redoxin GO:0016491 LT40_RS10945 76b9dae3942d93b1cb1e76d5a769bdaa 166 PANTHER PTHR10681 3 166 1.7E-46 T 23-04-2016 LT40_RS10945 76b9dae3942d93b1cb1e76d5a769bdaa 166 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 37.756 T 23-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.7E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 SUPERFAMILY SSF53850 91 295 3.88E-33 T 23-04-2016 LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 Pfam PF03466 LysR substrate binding domain 91 295 1.6E-36 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 SUPERFAMILY SSF46785 1 113 1.02E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 PANTHER PTHR30346:SF13 1 294 2.2E-107 T 23-04-2016 LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 8.6E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 8.6E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 8.6E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 Gene3D G3DSA:3.40.190.10 93 179 1.3E-18 T 23-04-2016 LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 PANTHER PTHR30346 1 294 2.2E-107 T 23-04-2016 LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 Gene3D G3DSA:3.40.190.10 180 268 1.2E-31 T 23-04-2016 LT40_RS03425 e65bf795c01761d7bfe382a07884e1d3 318 Gene3D G3DSA:1.10.10.10 2 84 4.5E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS19575 f168b7ecd306e0fcee8c9b20f4135c76 141 Pfam PF12903 Protein of unknown function (DUF3830) 5 139 8.4E-31 T 23-04-2016 IPR024532 Protein of unknown function DUF3830 LT40_RS19575 f168b7ecd306e0fcee8c9b20f4135c76 141 SUPERFAMILY SSF50891 3 101 8.72E-5 T 23-04-2016 IPR029000 Cyclophilin-like domain LT40_RS02990 178faa37a78a35f724fc7cb257c3a2f3 304 SUPERFAMILY SSF53850 26 295 7.96E-60 T 23-04-2016 LT40_RS02990 178faa37a78a35f724fc7cb257c3a2f3 304 PANTHER PTHR30177:SF9 16 297 2.0E-92 T 23-04-2016 LT40_RS02990 178faa37a78a35f724fc7cb257c3a2f3 304 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 293 1.5E-60 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LT40_RS02990 178faa37a78a35f724fc7cb257c3a2f3 304 PANTHER PTHR30177 16 297 2.0E-92 T 23-04-2016 LT40_RS02990 178faa37a78a35f724fc7cb257c3a2f3 304 Gene3D G3DSA:3.40.190.10 235 295 4.5E-16 T 23-04-2016 LT40_RS02990 178faa37a78a35f724fc7cb257c3a2f3 304 Gene3D G3DSA:3.40.190.10 24 133 2.0E-33 T 23-04-2016 LT40_RS02990 178faa37a78a35f724fc7cb257c3a2f3 304 Gene3D G3DSA:3.40.190.120 134 234 2.2E-30 T 23-04-2016 LT40_RS03215 6371faa1eea6922a2498411e518f91f0 317 Hamap MF_00524 Glucokinase [glk]. 1 315 35.115 T 23-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 LT40_RS03215 6371faa1eea6922a2498411e518f91f0 317 TIGRFAM TIGR00749 glk: glucokinase 5 309 8.0E-80 T 23-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 LT40_RS03215 6371faa1eea6922a2498411e518f91f0 317 SUPERFAMILY SSF53067 7 313 5.44E-62 T 23-04-2016 LT40_RS03215 6371faa1eea6922a2498411e518f91f0 317 PANTHER PTHR30514 1 317 1.9E-78 T 23-04-2016 LT40_RS03215 6371faa1eea6922a2498411e518f91f0 317 PANTHER PTHR30514:SF0 1 317 1.9E-78 T 23-04-2016 LT40_RS03215 6371faa1eea6922a2498411e518f91f0 317 Pfam PF02685 Glucokinase 5 314 3.7E-110 T 23-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 LT40_RS03215 6371faa1eea6922a2498411e518f91f0 317 Gene3D G3DSA:3.40.367.20 100 298 1.9E-69 T 23-04-2016 LT40_RS11870 7c2a8f69028484d48e12de9271961c20 428 SUPERFAMILY SSF47203 239 381 2.09E-13 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS11870 7c2a8f69028484d48e12de9271961c20 428 Gene3D G3DSA:1.10.540.10 10 116 5.8E-18 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS11870 7c2a8f69028484d48e12de9271961c20 428 Gene3D G3DSA:1.20.140.10 216 400 1.8E-47 T 23-04-2016 LT40_RS11870 7c2a8f69028484d48e12de9271961c20 428 PIRSF PIRSF016578 11 389 1.1E-28 T 23-04-2016 LT40_RS11870 7c2a8f69028484d48e12de9271961c20 428 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 214 8.1E-9 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LT40_RS11870 7c2a8f69028484d48e12de9271961c20 428 SUPERFAMILY SSF56645 27 222 5.37E-42 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS11870 7c2a8f69028484d48e12de9271961c20 428 PANTHER PTHR10909 23 414 9.7E-79 T 23-04-2016 LT40_RS11870 7c2a8f69028484d48e12de9271961c20 428 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 246 379 3.9E-14 T 23-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain LT40_RS11870 7c2a8f69028484d48e12de9271961c20 428 PANTHER PTHR10909:SF334 23 414 9.7E-79 T 23-04-2016 LT40_RS11870 7c2a8f69028484d48e12de9271961c20 428 Gene3D G3DSA:2.40.110.10 140 215 6.7E-20 T 23-04-2016 LT40_RS19580 1d151eaf6d7b0ccb13271c52d72e9552 207 Pfam PF01121 Dephospho-CoA kinase 9 184 1.1E-62 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 LT40_RS19580 1d151eaf6d7b0ccb13271c52d72e9552 207 SUPERFAMILY SSF52540 10 196 1.43E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19580 1d151eaf6d7b0ccb13271c52d72e9552 207 Gene3D G3DSA:3.40.50.300 6 199 8.4E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19580 1d151eaf6d7b0ccb13271c52d72e9552 207 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 8 202 25.147 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 LT40_RS19580 1d151eaf6d7b0ccb13271c52d72e9552 207 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 10 193 6.0E-47 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 LT40_RS19580 1d151eaf6d7b0ccb13271c52d72e9552 207 PANTHER PTHR10695 9 200 9.2E-56 T 23-04-2016 LT40_RS20025 bd5689fd4e8108cd85ecf2ce777bff7e 177 Gene3D G3DSA:2.60.40.1090 25 177 3.9E-39 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LT40_RS20025 bd5689fd4e8108cd85ecf2ce777bff7e 177 Pfam PF00419 Fimbrial protein 27 176 3.7E-19 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LT40_RS20025 bd5689fd4e8108cd85ecf2ce777bff7e 177 PANTHER PTHR33420 1 177 1.5E-38 T 23-04-2016 LT40_RS20025 bd5689fd4e8108cd85ecf2ce777bff7e 177 SUPERFAMILY SSF49401 26 177 7.95E-33 T 23-04-2016 IPR008966 Adhesion domain LT40_RS14080 cdfb343166241a405b0b20d896cca4dd 307 PANTHER PTHR30024:SF11 1 305 5.0E-117 T 23-04-2016 LT40_RS14080 cdfb343166241a405b0b20d896cca4dd 307 SMART SM00062 26 247 2.6E-21 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS14080 cdfb343166241a405b0b20d896cca4dd 307 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 27 305 1.9E-85 T 23-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 LT40_RS14080 cdfb343166241a405b0b20d896cca4dd 307 SUPERFAMILY SSF53850 27 302 4.45E-46 T 23-04-2016 LT40_RS14080 cdfb343166241a405b0b20d896cca4dd 307 Gene3D G3DSA:3.40.190.10 108 227 4.3E-27 T 23-04-2016 LT40_RS14080 cdfb343166241a405b0b20d896cca4dd 307 Gene3D G3DSA:3.40.190.10 28 86 7.6E-4 T 23-04-2016 LT40_RS14080 cdfb343166241a405b0b20d896cca4dd 307 PANTHER PTHR30024 1 305 5.0E-117 T 23-04-2016 LT40_RS14080 cdfb343166241a405b0b20d896cca4dd 307 Pfam PF09084 NMT1/THI5 like 59 229 3.4E-13 T 23-04-2016 IPR015168 SsuA/THI5-like LT40_RS07695 6a04ecc291d4c0f699a39690750d833d 416 PANTHER PTHR23539:SF1 1 407 3.8E-109 T 23-04-2016 LT40_RS07695 6a04ecc291d4c0f699a39690750d833d 416 Gene3D G3DSA:1.20.1250.20 207 401 2.2E-28 T 23-04-2016 LT40_RS07695 6a04ecc291d4c0f699a39690750d833d 416 SUPERFAMILY SSF103473 9 406 1.57E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS07695 6a04ecc291d4c0f699a39690750d833d 416 Pfam PF07690 Major Facilitator Superfamily 22 264 1.6E-26 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS07695 6a04ecc291d4c0f699a39690750d833d 416 Gene3D G3DSA:1.20.1250.20 18 186 1.8E-20 T 23-04-2016 LT40_RS07695 6a04ecc291d4c0f699a39690750d833d 416 PANTHER PTHR23539 1 407 3.8E-109 T 23-04-2016 LT40_RS04350 f7d29f1d114e0ae539aaccd659513d24 429 PANTHER PTHR23508:SF12 1 419 9.8E-280 T 23-04-2016 LT40_RS04350 f7d29f1d114e0ae539aaccd659513d24 429 SUPERFAMILY SSF103473 11 423 1.22E-65 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04350 f7d29f1d114e0ae539aaccd659513d24 429 Gene3D G3DSA:1.20.1250.20 240 423 6.0E-20 T 23-04-2016 LT40_RS04350 f7d29f1d114e0ae539aaccd659513d24 429 Gene3D G3DSA:1.20.1250.20 11 223 3.8E-25 T 23-04-2016 LT40_RS04350 f7d29f1d114e0ae539aaccd659513d24 429 Pfam PF00083 Sugar (and other) transporter 19 215 3.7E-27 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS04350 f7d29f1d114e0ae539aaccd659513d24 429 Pfam PF00083 Sugar (and other) transporter 220 414 5.9E-10 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS04350 f7d29f1d114e0ae539aaccd659513d24 429 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 24 413 1.2E-143 T 23-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 LT40_RS04350 f7d29f1d114e0ae539aaccd659513d24 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 127 152 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS04350 f7d29f1d114e0ae539aaccd659513d24 429 PANTHER PTHR23508 1 419 9.8E-280 T 23-04-2016 LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 SUPERFAMILY SSF47384 299 373 3.73E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 Pfam PF00512 His Kinase A (phospho-acceptor) domain 310 373 4.6E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 Gene3D G3DSA:3.30.450.20 195 231 1.9E-5 T 23-04-2016 LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 SUPERFAMILY SSF55874 366 524 5.37E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 1.3E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 1.3E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 1.3E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 SMART SM00388 310 376 1.0E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 PANTHER PTHR24423:SF483 194 524 1.4E-136 T 23-04-2016 LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 PANTHER PTHR24423 194 524 1.4E-136 T 23-04-2016 LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 418 524 1.7E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 SMART SM00387 417 528 1.0E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 Gene3D G3DSA:1.10.287.130 304 372 4.6E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS19515 025f9e44f1dc27628cc23be4e8fa1420 531 Gene3D G3DSA:3.30.565.10 378 524 7.7E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 Pfam PF00989 PAS fold 9 119 5.0E-11 T 23-04-2016 IPR013767 PAS fold GO:0006355 LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 Gene3D G3DSA:3.30.70.270 275 441 1.6E-59 T 23-04-2016 LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 PANTHER PTHR10799:SF657 307 545 1.1E-78 T 23-04-2016 LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 PANTHER PTHR10799:SF657 1 100 1.1E-78 T 23-04-2016 LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 Pfam PF00563 EAL domain 451 682 1.0E-75 T 23-04-2016 IPR001633 EAL domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 SUPERFAMILY SSF55073 279 437 5.18E-50 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 SUPERFAMILY SSF55785 170 271 1.13E-8 T 23-04-2016 IPR000014 PAS domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 PANTHER PTHR10799 307 545 1.1E-78 T 23-04-2016 LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 PANTHER PTHR10799 1 100 1.1E-78 T 23-04-2016 LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 Gene3D G3DSA:3.30.450.20 144 262 3.1E-13 T 23-04-2016 LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 SMART SM00052 445 687 1.3E-113 T 23-04-2016 IPR001633 EAL domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 SMART SM00091 7 76 3.8 T 23-04-2016 IPR000014 PAS domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 SMART SM00091 149 216 0.12 T 23-04-2016 IPR000014 PAS domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 430 1.2E-49 T 23-04-2016 IPR000160 GGDEF domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 SMART SM00267 263 435 5.4E-67 T 23-04-2016 IPR000160 GGDEF domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 SUPERFAMILY SSF55785 17 122 4.67E-21 T 23-04-2016 IPR000014 PAS domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 271 434 5.2E-43 T 23-04-2016 IPR000160 GGDEF domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 Pfam PF13188 PAS domain 150 198 3.3E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 Gene3D G3DSA:3.30.450.20 20 122 4.7E-20 T 23-04-2016 LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 SUPERFAMILY SSF141868 450 687 1.31E-90 T 23-04-2016 IPR001633 EAL domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 SMART SM00086 81 123 7.2E-5 T 23-04-2016 IPR001610 PAC motif LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 SMART SM00086 222 263 390.0 T 23-04-2016 IPR001610 PAC motif LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 269 1.6E-7 T 23-04-2016 IPR000014 PAS domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 124 9.4E-16 T 23-04-2016 IPR000014 PAS domain LT40_RS19775 f535456a77b117451e337a83dd94cf4a 690 Gene3D G3DSA:3.20.20.450 449 687 8.9E-96 T 23-04-2016 IPR001633 EAL domain LT40_RS02170 4372bb30578944b8a8258b19a287a0d4 150 Gene3D G3DSA:3.30.420.10 2 144 1.3E-60 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS02170 4372bb30578944b8a8258b19a287a0d4 150 PANTHER PTHR10642 1 145 3.6E-57 T 23-04-2016 LT40_RS02170 4372bb30578944b8a8258b19a287a0d4 150 Pfam PF00075 RNase H 4 141 5.0E-49 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 LT40_RS02170 4372bb30578944b8a8258b19a287a0d4 150 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 34.139 T 23-04-2016 IPR022892 Ribonuclease H GO:0004523 LT40_RS02170 4372bb30578944b8a8258b19a287a0d4 150 SUPERFAMILY SSF53098 3 142 8.6E-58 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS10045 d0fd9c641f8b9d14e46d5e2a99d806e3 293 SMART SM00382 56 237 2.5E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10045 d0fd9c641f8b9d14e46d5e2a99d806e3 293 PANTHER PTHR24220 29 247 2.5E-143 T 23-04-2016 LT40_RS10045 d0fd9c641f8b9d14e46d5e2a99d806e3 293 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS10045 d0fd9c641f8b9d14e46d5e2a99d806e3 293 SUPERFAMILY SSF52540 27 241 6.36E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10045 d0fd9c641f8b9d14e46d5e2a99d806e3 293 Gene3D G3DSA:3.40.50.300 21 247 1.2E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10045 d0fd9c641f8b9d14e46d5e2a99d806e3 293 PANTHER PTHR24220:SF422 29 247 2.5E-143 T 23-04-2016 LT40_RS10045 d0fd9c641f8b9d14e46d5e2a99d806e3 293 Pfam PF00005 ABC transporter 48 189 1.6E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 Pfam PF00990 Diguanylate cyclase, GGDEF domain 276 433 5.3E-46 T 23-04-2016 IPR000160 GGDEF domain LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 SMART SM00091 152 219 4.8E-9 T 23-04-2016 IPR000014 PAS domain LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 Pfam PF00563 EAL domain 456 688 1.7E-65 T 23-04-2016 IPR001633 EAL domain LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 SMART SM00448 13 127 3.3E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 272 436 3.4E-45 T 23-04-2016 IPR000160 GGDEF domain LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 Gene3D G3DSA:3.30.70.270 278 443 1.3E-57 T 23-04-2016 LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 Gene3D G3DSA:3.30.450.20 148 261 1.9E-17 T 23-04-2016 LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 Pfam PF00989 PAS fold 155 244 1.2E-7 T 23-04-2016 IPR013767 PAS fold GO:0006355 LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 155 263 2.2E-9 T 23-04-2016 IPR000014 PAS domain LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 Gene3D G3DSA:3.40.50.2300 13 147 2.2E-37 T 23-04-2016 LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 SUPERFAMILY SSF55785 139 260 2.97E-16 T 23-04-2016 IPR000014 PAS domain LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 Pfam PF00072 Response regulator receiver domain 16 127 3.1E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 PANTHER PTHR10799 309 547 2.4E-69 T 23-04-2016 LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 PANTHER PTHR10799 122 264 2.4E-69 T 23-04-2016 LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 SUPERFAMILY SSF141868 455 696 5.23E-74 T 23-04-2016 IPR001633 EAL domain LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 SUPERFAMILY SSF52172 13 169 1.14E-39 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 SUPERFAMILY SSF55073 281 439 2.86E-50 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 PANTHER PTHR10799:SF774 309 547 2.4E-69 T 23-04-2016 LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 PANTHER PTHR10799:SF774 122 264 2.4E-69 T 23-04-2016 LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 Gene3D G3DSA:3.20.20.450 451 696 4.9E-79 T 23-04-2016 IPR001633 EAL domain LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 SMART SM00052 447 693 8.9E-80 T 23-04-2016 IPR001633 EAL domain LT40_RS17365 a4cedf9742cbdb727eb8d0d8d17258be 709 SMART SM00267 265 437 1.3E-62 T 23-04-2016 IPR000160 GGDEF domain LT40_RS04325 6b0a5e30d8b70aadce163b6cdb6d22a5 269 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 20 267 1.5E-104 T 23-04-2016 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 LT40_RS04325 6b0a5e30d8b70aadce163b6cdb6d22a5 269 Gene3D G3DSA:3.30.450.40 89 267 1.0E-57 T 23-04-2016 IPR029016 GAF domain-like LT40_RS04325 6b0a5e30d8b70aadce163b6cdb6d22a5 269 SUPERFAMILY SSF55781 88 267 2.42E-48 T 23-04-2016 IPR029016 GAF domain-like LT40_RS04325 6b0a5e30d8b70aadce163b6cdb6d22a5 269 Pfam PF01614 Bacterial transcriptional regulator 140 265 2.3E-42 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal LT40_RS04325 6b0a5e30d8b70aadce163b6cdb6d22a5 269 PANTHER PTHR30136 19 267 4.0E-104 T 23-04-2016 LT40_RS04325 6b0a5e30d8b70aadce163b6cdb6d22a5 269 SMART SM00346 23 111 1.7E-32 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS04325 6b0a5e30d8b70aadce163b6cdb6d22a5 269 PANTHER PTHR30136:SF10 19 267 4.0E-104 T 23-04-2016 LT40_RS04325 6b0a5e30d8b70aadce163b6cdb6d22a5 269 SUPERFAMILY SSF46785 24 95 8.91E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04325 6b0a5e30d8b70aadce163b6cdb6d22a5 269 Pfam PF09339 IclR helix-turn-helix domain 25 76 7.3E-14 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS04325 6b0a5e30d8b70aadce163b6cdb6d22a5 269 Gene3D G3DSA:1.10.10.10 11 81 6.2E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 SUPERFAMILY SSF50022 13 154 7.07E-40 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 Pfam PF00355 Rieske [2Fe-2S] domain 41 120 6.6E-18 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 Gene3D G3DSA:3.90.380.10 150 348 1.5E-17 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 77 97 1.8E-20 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 139 165 1.8E-20 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 178 200 1.8E-20 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 56 71 1.8E-20 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 26 51 1.8E-20 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 98 118 1.8E-20 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 PANTHER PTHR21266:SF2 14 374 8.9E-71 T 23-04-2016 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 Gene3D G3DSA:2.102.10.10 40 149 5.6E-30 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 SUPERFAMILY SSF55961 156 358 2.83E-34 T 23-04-2016 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 PANTHER PTHR21266 14 374 8.9E-71 T 23-04-2016 LT40_RS18655 62eedcee07019d2b04bde86b54976d40 375 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 180 367 4.1E-27 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 SUPERFAMILY SSF46557 4 78 1.83E-26 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 Gene3D G3DSA:1.10.287.180 3 75 6.3E-30 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.8E-52 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 30.861 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 PANTHER PTHR30437 1 156 4.8E-57 T 23-04-2016 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 4.3E-28 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 Gene3D G3DSA:3.10.50.30 81 156 2.9E-29 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 4.4E-26 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 SUPERFAMILY SSF54534 82 156 3.53E-22 T 23-04-2016 LT40_RS12950 b80c04e9a5469aae5598c7002242e9bf 158 PIRSF PIRSF006092 1 158 5.0E-49 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 SUPERFAMILY SSF51246 331 443 7.85E-43 T 23-04-2016 IPR011054 Rudiment single hybrid motif LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 Gene3D G3DSA:3.40.50.20 1 129 1.4E-50 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 5.7E-39 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 Gene3D G3DSA:3.30.470.20 204 444 6.9E-95 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 5.2E-223 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 SUPERFAMILY SSF52440 1 113 2.45E-46 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.8E-81 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 SMART SM00878 336 441 3.1E-64 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 SUPERFAMILY SSF56059 83 346 1.15E-66 T 23-04-2016 LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 PANTHER PTHR18866 1 441 1.6E-286 T 23-04-2016 LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 Gene3D G3DSA:3.30.1490.20 130 203 5.9E-28 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS13450 3facb850a5bc9093a210993a44fbbf36 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.3E-44 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain LT40_RS07510 e3a0297de3e4c5c71bf5ed86efd70078 177 ProSitePatterns PS00938 Initiation factor 3 signature. 64 77 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 LT40_RS07510 e3a0297de3e4c5c71bf5ed86efd70078 177 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 89 174 1.3E-36 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 LT40_RS07510 e3a0297de3e4c5c71bf5ed86efd70078 177 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 13 176 4.0E-65 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 LT40_RS07510 e3a0297de3e4c5c71bf5ed86efd70078 177 Gene3D G3DSA:3.30.110.10 85 177 6.0E-40 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 LT40_RS07510 e3a0297de3e4c5c71bf5ed86efd70078 177 Gene3D G3DSA:3.10.20.80 11 84 7.6E-32 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 LT40_RS07510 e3a0297de3e4c5c71bf5ed86efd70078 177 SUPERFAMILY SSF55200 89 177 7.98E-33 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 LT40_RS07510 e3a0297de3e4c5c71bf5ed86efd70078 177 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 13 78 1.0E-28 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 LT40_RS07510 e3a0297de3e4c5c71bf5ed86efd70078 177 SUPERFAMILY SSF54364 12 84 3.27E-26 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 LT40_RS07510 e3a0297de3e4c5c71bf5ed86efd70078 177 PANTHER PTHR10938 2 177 3.6E-65 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 LT40_RS07510 e3a0297de3e4c5c71bf5ed86efd70078 177 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 176 30.011 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 LT40_RS00155 6707c819fdc8eed3aa01b99c75d6846e 157 Gene3D G3DSA:3.40.30.10 2 154 4.1E-46 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS00155 6707c819fdc8eed3aa01b99c75d6846e 157 Pfam PF00578 AhpC/TSA family 7 133 4.8E-34 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS00155 6707c819fdc8eed3aa01b99c75d6846e 157 PANTHER PTHR10681 1 154 4.2E-44 T 23-04-2016 LT40_RS00155 6707c819fdc8eed3aa01b99c75d6846e 157 PIRSF PIRSF000239 1 155 2.6E-24 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 LT40_RS00155 6707c819fdc8eed3aa01b99c75d6846e 157 SUPERFAMILY SSF52833 4 154 1.19E-47 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS11610 1530067963cfddd0f0ec0e5030ccd56e 161 Pfam PF01613 Flavin reductase like domain 11 155 5.9E-36 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LT40_RS11610 1530067963cfddd0f0ec0e5030ccd56e 161 SUPERFAMILY SSF50475 3 155 1.53E-44 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS11610 1530067963cfddd0f0ec0e5030ccd56e 161 Gene3D G3DSA:2.30.110.10 3 153 1.1E-48 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS11610 1530067963cfddd0f0ec0e5030ccd56e 161 PANTHER PTHR30466 2 153 2.3E-37 T 23-04-2016 LT40_RS11610 1530067963cfddd0f0ec0e5030ccd56e 161 SMART SM00903 11 156 1.7E-52 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LT40_RS13755 d663476e4bd0926f6932706a84216661 879 SUPERFAMILY SSF50249 71 151 7.81E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS13755 d663476e4bd0926f6932706a84216661 879 SMART SM00357 90 149 1.0E-10 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 LT40_RS13755 d663476e4bd0926f6932706a84216661 879 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 746 3.9E-262 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 LT40_RS13755 d663476e4bd0926f6932706a84216661 879 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 78 745 4.4E-224 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 LT40_RS13755 d663476e4bd0926f6932706a84216661 879 Pfam PF00575 S1 RNA binding domain 662 746 1.6E-12 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS13755 d663476e4bd0926f6932706a84216661 879 SUPERFAMILY SSF50249 224 664 1.03E-146 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS13755 d663476e4bd0926f6932706a84216661 879 Pfam PF08206 Ribonuclease B OB domain 91 148 3.6E-20 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain LT40_RS13755 d663476e4bd0926f6932706a84216661 879 SUPERFAMILY SSF50249 666 745 4.05E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS13755 d663476e4bd0926f6932706a84216661 879 SUPERFAMILY SSF50249 142 239 1.36E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS13755 d663476e4bd0926f6932706a84216661 879 Pfam PF08461 Ribonuclease R winged-helix domain 27 81 4.3E-8 T 23-04-2016 IPR013668 Ribonuclease R winged-helix domain LT40_RS13755 d663476e4bd0926f6932706a84216661 879 Pfam PF00773 RNB domain 264 601 3.4E-109 T 23-04-2016 LT40_RS13755 d663476e4bd0926f6932706a84216661 879 ProSitePatterns PS01175 Ribonuclease II family signature. 570 594 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site LT40_RS13755 d663476e4bd0926f6932706a84216661 879 Gene3D G3DSA:2.40.50.140 666 750 3.2E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS13755 d663476e4bd0926f6932706a84216661 879 PANTHER PTHR23355:SF9 8 829 1.4E-270 T 23-04-2016 LT40_RS13755 d663476e4bd0926f6932706a84216661 879 SMART SM00316 664 747 1.8E-13 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS13755 d663476e4bd0926f6932706a84216661 879 Hamap MF_01895 Ribonuclease R [rnr]. 42 747 56.306 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 LT40_RS13755 d663476e4bd0926f6932706a84216661 879 PANTHER PTHR23355 8 829 1.4E-270 T 23-04-2016 LT40_RS13755 d663476e4bd0926f6932706a84216661 879 SMART SM00955 264 603 2.1E-183 T 23-04-2016 LT40_RS04200 98f0bf73a25d47b1e46fb285a0ef2ad9 475 SUPERFAMILY SSF46626 334 475 7.63E-24 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS04200 98f0bf73a25d47b1e46fb285a0ef2ad9 475 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 33 475 2.0E-132 T 23-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase LT40_RS04200 98f0bf73a25d47b1e46fb285a0ef2ad9 475 PANTHER PTHR30600:SF4 29 109 2.2E-153 T 23-04-2016 LT40_RS04200 98f0bf73a25d47b1e46fb285a0ef2ad9 475 PANTHER PTHR30600:SF4 183 231 2.2E-153 T 23-04-2016 LT40_RS04200 98f0bf73a25d47b1e46fb285a0ef2ad9 475 PANTHER PTHR30600:SF4 256 475 2.2E-153 T 23-04-2016 LT40_RS04200 98f0bf73a25d47b1e46fb285a0ef2ad9 475 PIRSF PIRSF028099 4 475 5.6E-183 T 23-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase LT40_RS04200 98f0bf73a25d47b1e46fb285a0ef2ad9 475 Gene3D G3DSA:1.10.760.10 335 475 9.2E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS04200 98f0bf73a25d47b1e46fb285a0ef2ad9 475 PANTHER PTHR30600 29 109 2.2E-153 T 23-04-2016 LT40_RS04200 98f0bf73a25d47b1e46fb285a0ef2ad9 475 PANTHER PTHR30600 183 231 2.2E-153 T 23-04-2016 LT40_RS04200 98f0bf73a25d47b1e46fb285a0ef2ad9 475 PANTHER PTHR30600 256 475 2.2E-153 T 23-04-2016 LT40_RS03595 f2f26a09e6f5394b024f95e7d2a9a863 322 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS03595 f2f26a09e6f5394b024f95e7d2a9a863 322 SMART SM00382 39 231 5.9E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS03595 f2f26a09e6f5394b024f95e7d2a9a863 322 PANTHER PTHR24220:SF493 6 319 1.4E-185 T 23-04-2016 LT40_RS03595 f2f26a09e6f5394b024f95e7d2a9a863 322 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 317 2.8E-27 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS03595 f2f26a09e6f5394b024f95e7d2a9a863 322 Pfam PF00005 ABC transporter 30 182 1.0E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS03595 f2f26a09e6f5394b024f95e7d2a9a863 322 SUPERFAMILY SSF52540 5 253 6.63E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03595 f2f26a09e6f5394b024f95e7d2a9a863 322 Gene3D G3DSA:3.40.50.300 4 255 3.1E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03595 f2f26a09e6f5394b024f95e7d2a9a863 322 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 6.8E-18 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS03595 f2f26a09e6f5394b024f95e7d2a9a863 322 PANTHER PTHR24220 6 319 1.4E-185 T 23-04-2016 LT40_RS07375 de62723a8cdf25b52ab760d5a10dfb9e 774 PANTHER PTHR10799 295 762 3.5E-176 T 23-04-2016 LT40_RS07375 de62723a8cdf25b52ab760d5a10dfb9e 774 SMART SM00487 298 482 5.9E-31 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS07375 de62723a8cdf25b52ab760d5a10dfb9e 774 SMART SM00490 629 709 7.9E-21 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS07375 de62723a8cdf25b52ab760d5a10dfb9e 774 Pfam PF00176 SNF2 family N-terminal domain 317 585 6.7E-63 T 23-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 LT40_RS07375 de62723a8cdf25b52ab760d5a10dfb9e 774 Gene3D G3DSA:3.40.50.300 298 471 2.7E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07375 de62723a8cdf25b52ab760d5a10dfb9e 774 Pfam PF00271 Helicase conserved C-terminal domain 600 709 2.5E-16 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS07375 de62723a8cdf25b52ab760d5a10dfb9e 774 SUPERFAMILY SSF52540 514 762 1.19E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07375 de62723a8cdf25b52ab760d5a10dfb9e 774 SUPERFAMILY SSF52540 288 513 3.55E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07375 de62723a8cdf25b52ab760d5a10dfb9e 774 Gene3D G3DSA:3.40.50.300 597 737 1.0E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04475 6ce05fd86290072bfd45f7748d1924c2 492 PANTHER PTHR30618:SF6 23 483 3.4E-211 T 23-04-2016 LT40_RS04475 6ce05fd86290072bfd45f7748d1924c2 492 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 37 466 2.1E-82 T 23-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 LT40_RS04475 6ce05fd86290072bfd45f7748d1924c2 492 PANTHER PTHR30618 23 483 3.4E-211 T 23-04-2016 LT40_RS01025 77cfb9bf237074fc467e03f9da1f5bfd 393 Gene3D G3DSA:3.10.290.10 17 75 1.0E-16 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS01025 77cfb9bf237074fc467e03f9da1f5bfd 393 SUPERFAMILY SSF55120 81 251 2.64E-42 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS01025 77cfb9bf237074fc467e03f9da1f5bfd 393 Pfam PF01479 S4 domain 19 63 2.7E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS01025 77cfb9bf237074fc467e03f9da1f5bfd 393 SMART SM00363 18 75 6.0E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS01025 77cfb9bf237074fc467e03f9da1f5bfd 393 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 120 134 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LT40_RS01025 77cfb9bf237074fc467e03f9da1f5bfd 393 PANTHER PTHR21600 6 324 3.2E-97 T 23-04-2016 LT40_RS01025 77cfb9bf237074fc467e03f9da1f5bfd 393 PANTHER PTHR21600:SF2 6 324 3.2E-97 T 23-04-2016 LT40_RS01025 77cfb9bf237074fc467e03f9da1f5bfd 393 Pfam PF00849 RNA pseudouridylate synthase 82 212 1.3E-13 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS01025 77cfb9bf237074fc467e03f9da1f5bfd 393 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 86 248 1.4E-52 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LT40_RS01025 77cfb9bf237074fc467e03f9da1f5bfd 393 SUPERFAMILY SSF55174 19 110 4.37E-14 T 23-04-2016 LT40_RS20670 f30ee0e1d3c97703e4943368cf5029fe 312 PANTHER PTHR12366:SF25 18 249 2.1E-121 T 23-04-2016 LT40_RS20670 f30ee0e1d3c97703e4943368cf5029fe 312 Gene3D G3DSA:2.60.120.330 131 228 2.7E-15 T 23-04-2016 IPR027443 Isopenicillin N synthase-like LT40_RS20670 f30ee0e1d3c97703e4943368cf5029fe 312 PANTHER PTHR12366 18 249 2.1E-121 T 23-04-2016 LT40_RS20670 f30ee0e1d3c97703e4943368cf5029fe 312 SUPERFAMILY SSF51197 106 229 1.79E-15 T 23-04-2016 LT40_RS20670 f30ee0e1d3c97703e4943368cf5029fe 312 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 75 228 1.2E-47 T 23-04-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 LT40_RS09685 e92ddfc89f7f73db2d78cb00cd5db78b 302 Pfam PF04960 Glutaminase 19 302 1.2E-110 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 LT40_RS09685 e92ddfc89f7f73db2d78cb00cd5db78b 302 PANTHER PTHR12544 1 302 4.3E-146 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 LT40_RS09685 e92ddfc89f7f73db2d78cb00cd5db78b 302 TIGRFAM TIGR03814 Gln_ase: glutaminase A 6 302 4.5E-127 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 LT40_RS09685 e92ddfc89f7f73db2d78cb00cd5db78b 302 Gene3D G3DSA:3.40.710.10 2 302 1.4E-120 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS09685 e92ddfc89f7f73db2d78cb00cd5db78b 302 SUPERFAMILY SSF56601 2 302 2.95E-110 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS09685 e92ddfc89f7f73db2d78cb00cd5db78b 302 Hamap MF_00313 Glutaminase [glsA]. 1 302 45.902 T 23-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 LT40_RS14585 4aba40687c356f1f97354a7675ac290a 135 Pfam PF05154 TM2 domain 10 56 4.9E-16 T 23-04-2016 IPR007829 TM2 domain LT40_RS14585 4aba40687c356f1f97354a7675ac290a 135 Pfam PF05154 TM2 domain 74 121 8.7E-15 T 23-04-2016 IPR007829 TM2 domain LT40_RS14585 4aba40687c356f1f97354a7675ac290a 135 PANTHER PTHR21016 8 74 2.0E-22 T 23-04-2016 LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 SMART SM01382 125 253 1.7E-92 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 Gene3D G3DSA:4.10.950.10 197 273 1.3E-34 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 SUPERFAMILY SSF50249 2 126 7.2E-48 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 1.3E-128 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 3.5E-56 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 Gene3D G3DSA:2.40.50.140 1 115 3.1E-50 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 SUPERFAMILY SSF50104 127 273 2.77E-60 T 23-04-2016 IPR008991 Translation protein SH3-like domain LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 47.209 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.3E-33 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 PIRSF PIRSF002158 12 274 6.7E-100 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 SMART SM01383 42 119 2.4E-43 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 PANTHER PTHR13691 1 274 4.9E-144 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18370 02ad04c8c493d4c543a584e44192c9db 274 Gene3D G3DSA:2.30.30.30 120 196 3.0E-31 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 SUPERFAMILY SSF103515 446 735 3.01E-52 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 PRINTS PR01484 Pertactin virulence factor family signature 715 735 4.5E-30 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 PRINTS PR01484 Pertactin virulence factor family signature 690 715 4.5E-30 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 PRINTS PR01484 Pertactin virulence factor family signature 451 469 4.5E-30 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 PRINTS PR01484 Pertactin virulence factor family signature 604 621 4.5E-30 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 PRINTS PR01484 Pertactin virulence factor family signature 471 491 4.5E-30 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 PRINTS PR01484 Pertactin virulence factor family signature 652 673 4.5E-30 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 PRINTS PR01484 Pertactin virulence factor family signature 623 646 4.5E-30 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 PRINTS PR01484 Pertactin virulence factor family signature 512 536 4.5E-30 T 23-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 Gene3D G3DSA:2.40.128.130 432 735 2.1E-83 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 SMART SM00869 471 724 3.6E-43 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 Gene3D G3DSA:2.160.20.20 64 425 2.1E-53 T 23-04-2016 IPR012332 P22 tailspike C-terminal domain-like LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 SUPERFAMILY SSF51126 52 426 2.74E-40 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 Pfam PF03797 Autotransporter beta-domain 470 720 2.1E-50 T 23-04-2016 IPR005546 Autotransporter beta-domain LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 PANTHER PTHR12338 429 735 5.4E-16 T 23-04-2016 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 329 735 3.3E-98 T 23-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 PANTHER PTHR12338:SF7 429 735 5.4E-16 T 23-04-2016 LT40_RS17735 da54dec724feb6ff14243d1f560d1e48 735 Pfam PF03212 Pertactin 314 425 2.9E-26 T 23-04-2016 IPR004899 Pertactin, central region LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 SUPERFAMILY SSF52540 301 518 9.84E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 PANTHER PTHR19211 1 554 0.0 T 23-04-2016 LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 SUPERFAMILY SSF52540 9 244 3.12E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 Pfam PF12848 ABC transporter 230 305 3.0E-11 T 23-04-2016 IPR032781 ABC-transporter extension domain LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 2.1E-296 T 23-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 SMART SM00382 348 518 1.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 SMART SM00382 31 236 2.4E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 Gene3D G3DSA:3.40.50.300 322 541 7.6E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 PANTHER PTHR19211:SF7 1 554 0.0 T 23-04-2016 LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 Gene3D G3DSA:3.40.50.300 8 105 5.2E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 Gene3D G3DSA:3.40.50.300 141 288 5.2E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 Pfam PF00005 ABC transporter 22 191 1.4E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 Pfam PF00005 ABC transporter 340 473 2.4E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS19355 86c57132c6a7977714edc4cee0d48ebf 554 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS16085 eb2f5ef3594e08c4bcb6f30f9f70c065 290 Gene3D G3DSA:1.10.260.40 131 177 1.2E-4 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS16085 eb2f5ef3594e08c4bcb6f30f9f70c065 290 Pfam PF02195 ParB-like nuclease domain 39 127 2.9E-29 T 23-04-2016 IPR003115 ParB/Sulfiredoxin LT40_RS16085 eb2f5ef3594e08c4bcb6f30f9f70c065 290 SUPERFAMILY SSF110849 37 184 1.62E-34 T 23-04-2016 IPR003115 ParB/Sulfiredoxin LT40_RS16085 eb2f5ef3594e08c4bcb6f30f9f70c065 290 PANTHER PTHR33375 1 290 1.3E-101 T 23-04-2016 LT40_RS16085 eb2f5ef3594e08c4bcb6f30f9f70c065 290 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 205 3.6E-60 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 LT40_RS16085 eb2f5ef3594e08c4bcb6f30f9f70c065 290 SMART SM00470 37 127 4.0E-38 T 23-04-2016 IPR003115 ParB/Sulfiredoxin LT40_RS16085 eb2f5ef3594e08c4bcb6f30f9f70c065 290 Gene3D G3DSA:3.90.1530.10 32 130 4.5E-42 T 23-04-2016 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 SUPERFAMILY SSF51971 336 523 4.71E-42 T 23-04-2016 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 Gene3D G3DSA:3.20.20.70 6 363 3.3E-122 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 PANTHER PTHR22893 1 420 2.0E-245 T 23-04-2016 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 SUPERFAMILY SSF51395 4 365 3.93E-110 T 23-04-2016 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 625 639 1.5E-5 T 23-04-2016 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 379 401 1.5E-5 T 23-04-2016 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 SUPERFAMILY SSF51905 473 633 5.44E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 333 1.8E-86 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 PANTHER PTHR22893:SF25 1 420 2.0E-245 T 23-04-2016 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 502 520 4.8E-15 T 23-04-2016 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 462 480 4.8E-15 T 23-04-2016 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 624 640 4.8E-15 T 23-04-2016 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 380 399 4.8E-15 T 23-04-2016 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 Gene3D G3DSA:3.50.50.60 364 469 6.4E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 Gene3D G3DSA:3.50.50.60 475 631 1.0E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS06210 187de255dbaeb752dc96fe40a98eb1c5 678 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 379 641 3.6E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16185 e6eadb147417db23948d8e6345d50aab 199 Gene3D G3DSA:2.60.120.10 108 197 2.7E-14 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS16185 e6eadb147417db23948d8e6345d50aab 199 PANTHER PTHR37943 2 126 2.8E-37 T 23-04-2016 LT40_RS16185 e6eadb147417db23948d8e6345d50aab 199 PANTHER PTHR37943:SF1 2 126 2.8E-37 T 23-04-2016 LT40_RS16185 e6eadb147417db23948d8e6345d50aab 199 Pfam PF05962 HutD 12 177 3.3E-47 T 23-04-2016 IPR010282 Uncharacterised protein family HutD/Ves LT40_RS16185 e6eadb147417db23948d8e6345d50aab 199 SUPERFAMILY SSF51182 6 185 3.02E-44 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS16185 e6eadb147417db23948d8e6345d50aab 199 Gene3D G3DSA:2.60.120.10 11 107 5.1E-34 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 ProSitePatterns PS00438 Catalase proximal active site signature. 80 96 - T 23-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 Pfam PF01965 DJ-1/PfpI family 562 658 1.7E-8 T 23-04-2016 IPR002818 DJ-1/PfpI LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 Gene3D G3DSA:3.40.50.880 561 712 3.5E-51 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 Pfam PF00199 Catalase 45 429 5.3E-178 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 374 382 - T 23-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 SUPERFAMILY SSF52317 559 707 5.0E-22 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 Gene3D G3DSA:2.40.180.10 23 399 1.6E-181 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 PIRSF PIRSF038927 8 710 0.0 T 23-04-2016 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 PANTHER PTHR11465 23 595 0.0 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 Pfam PF06628 Catalase-related immune-responsive 461 526 1.8E-21 T 23-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 PRINTS PR00067 Catalase signature 141 158 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 PRINTS PR00067 Catalase signature 57 80 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 PRINTS PR00067 Catalase signature 120 138 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 PRINTS PR00067 Catalase signature 329 356 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 PRINTS PR00067 Catalase signature 361 387 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 PRINTS PR00067 Catalase signature 160 178 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 SUPERFAMILY SSF56634 19 533 2.75E-220 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 SMART SM01060 44 432 1.0E-272 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS15735 6d159547f34e5480b6bb689280798eae 712 PANTHER PTHR11465:SF7 23 595 0.0 T 23-04-2016 LT40_RS07700 a07efc2a7bc5528e36be7eb4bfadc934 375 SUPERFAMILY SSF103473 5 369 1.96E-34 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS07700 a07efc2a7bc5528e36be7eb4bfadc934 375 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 17 361 2.1E-14 T 23-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB LT40_RS07700 a07efc2a7bc5528e36be7eb4bfadc934 375 Gene3D G3DSA:1.20.1250.20 198 369 1.3E-9 T 23-04-2016 LT40_RS07700 a07efc2a7bc5528e36be7eb4bfadc934 375 Gene3D G3DSA:1.20.1250.20 9 186 1.6E-15 T 23-04-2016 LT40_RS17860 d09bcbcb36ff48c92923c2b0f152169c 817 SUPERFAMILY SSF63411 245 398 1.28E-11 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LT40_RS17860 d09bcbcb36ff48c92923c2b0f152169c 817 TIGRFAM TIGR02110 PQQ_syn_pqqF: coenzyme PQQ biosynthesis protein PqqF 11 713 3.3E-222 T 23-04-2016 IPR011844 Coenzyme PQQ biosynthesis protein PqqF GO:0004222|GO:0006508|GO:0008270|GO:0018189 UniPathway: UPA00539 LT40_RS17860 d09bcbcb36ff48c92923c2b0f152169c 817 SUPERFAMILY SSF63411 622 791 1.04E-28 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LT40_RS17860 d09bcbcb36ff48c92923c2b0f152169c 817 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 40 63 - T 23-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 LT40_RS17860 d09bcbcb36ff48c92923c2b0f152169c 817 Pfam PF05193 Peptidase M16 inactive domain 180 334 1.4E-13 T 23-04-2016 IPR007863 Peptidase M16, C-terminal LT40_RS17860 d09bcbcb36ff48c92923c2b0f152169c 817 Gene3D G3DSA:3.30.830.10 4 225 1.2E-45 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LT40_RS17860 d09bcbcb36ff48c92923c2b0f152169c 817 PANTHER PTHR11851 2 317 1.9E-41 T 23-04-2016 LT40_RS17860 d09bcbcb36ff48c92923c2b0f152169c 817 SUPERFAMILY SSF63411 6 215 2.75E-40 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LT40_RS17860 d09bcbcb36ff48c92923c2b0f152169c 817 Gene3D G3DSA:3.30.830.10 247 355 2.2E-7 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LT40_RS17860 d09bcbcb36ff48c92923c2b0f152169c 817 Gene3D G3DSA:3.30.830.10 627 787 6.4E-28 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LT40_RS17860 d09bcbcb36ff48c92923c2b0f152169c 817 Pfam PF00675 Insulinase (Peptidase family M16) 20 149 1.3E-30 T 23-04-2016 IPR011765 Peptidase M16, N-terminal LT40_RS03090 057393870e79eed9702564b94531a5b8 407 SUPERFAMILY SSF103473 13 391 2.75E-43 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS03090 057393870e79eed9702564b94531a5b8 407 PANTHER PTHR23523:SF2 7 406 2.0E-151 T 23-04-2016 LT40_RS03090 057393870e79eed9702564b94531a5b8 407 TIGRFAM TIGR00896 CynX: cyanate transporter 23 373 7.9E-139 T 23-04-2016 IPR004747 Cyanate transport system protein GO:0016021 LT40_RS03090 057393870e79eed9702564b94531a5b8 407 PANTHER PTHR23523 7 406 2.0E-151 T 23-04-2016 LT40_RS03090 057393870e79eed9702564b94531a5b8 407 Gene3D G3DSA:1.20.1250.20 21 198 6.5E-14 T 23-04-2016 LT40_RS03090 057393870e79eed9702564b94531a5b8 407 Gene3D G3DSA:1.20.1250.20 214 389 1.2E-15 T 23-04-2016 LT40_RS03090 057393870e79eed9702564b94531a5b8 407 Pfam PF07690 Major Facilitator Superfamily 41 355 1.6E-20 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 Gene3D G3DSA:2.30.38.10 359 433 1.9E-20 T 23-04-2016 LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 Gene3D G3DSA:3.40.50.980 176 200 2.5E-24 T 23-04-2016 LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 Gene3D G3DSA:3.40.50.980 26 138 2.5E-24 T 23-04-2016 LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 Gene3D G3DSA:3.40.50.980 201 358 1.4E-31 T 23-04-2016 LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 SUPERFAMILY SSF56801 5 533 2.35E-126 T 23-04-2016 LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 Gene3D G3DSA:3.30.300.30 434 532 8.9E-25 T 23-04-2016 LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 Pfam PF00550 Phosphopantetheine attachment site 542 600 2.4E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 523 1.9E-12 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 PANTHER PTHR24095 1 534 1.2E-213 T 23-04-2016 LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 Gene3D G3DSA:1.10.1200.10 554 609 1.3E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 530 4.1E-248 T 23-04-2016 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 PANTHER PTHR24095:SF123 1 534 1.2E-213 T 23-04-2016 LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 SUPERFAMILY SSF47336 542 608 4.19E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 23-04-2016 IPR020845 AMP-binding, conserved site LT40_RS08325 53f92f96cf982e16df9413eae3c29886 611 Pfam PF00501 AMP-binding enzyme 32 439 3.0E-76 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PRINTS PR00415 Aconitase family signature 214 227 1.5E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PRINTS PR00415 Aconitase family signature 138 153 1.5E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PRINTS PR00415 Aconitase family signature 113 121 1.5E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PRINTS PR00415 Aconitase family signature 200 213 1.5E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PRINTS PR00415 Aconitase family signature 87 100 1.5E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PRINTS PR00415 Aconitase family signature 405 418 1.5E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PRINTS PR00415 Aconitase family signature 124 137 1.5E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PRINTS PR00415 Aconitase family signature 348 359 1.5E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PRINTS PR00415 Aconitase family signature 291 305 1.5E-47 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 Gene3D G3DSA:3.40.1060.10 171 286 3.0E-38 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PANTHER PTHR11670:SF38 332 471 1.1E-281 T 23-04-2016 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PANTHER PTHR11670:SF38 1 312 1.1E-281 T 23-04-2016 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 Gene3D G3DSA:3.30.499.10 4 162 3.9E-20 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 472 60.99 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 Pfam PF00330 Aconitase family (aconitate hydratase) 8 463 1.5E-152 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PANTHER PTHR11670 332 471 1.1E-281 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 PANTHER PTHR11670 1 312 1.1E-281 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 471 9.5E-234 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 SUPERFAMILY SSF53732 2 471 6.41E-161 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 ProSitePatterns PS00450 Aconitase family signature 1. 344 360 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 ProSitePatterns PS01244 Aconitase family signature 2. 405 418 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05570 9d4abd8afe8c7f99642dc6cd8f2fec7d 477 Gene3D G3DSA:3.30.499.10 340 472 2.4E-59 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 1 513 51.321 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 SUPERFAMILY SSF53795 200 513 1.92E-124 T 23-04-2016 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 Gene3D G3DSA:3.40.449.10 8 197 1.3E-67 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 Pfam PF01293 Phosphoenolpyruvate carboxykinase 7 467 2.7E-187 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 237 252 - T 23-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 PIRSF PIRSF006294 1 513 7.1E-206 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 Gene3D G3DSA:3.90.228.20 200 262 1.2E-104 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 Gene3D G3DSA:3.90.228.20 322 512 1.2E-104 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 513 3.8E-182 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 SUPERFAMILY SSF68923 6 198 5.76E-70 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 PANTHER PTHR30031:SF0 6 513 2.2E-269 T 23-04-2016 LT40_RS17210 648fe75a5dcf4f02896e0f44a983078a 513 PANTHER PTHR30031 6 513 2.2E-269 T 23-04-2016 LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 Pfam PF12833 Helix-turn-helix domain 232 310 3.8E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 SMART SM00342 226 309 1.9E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 SUPERFAMILY SSF52317 5 191 4.58E-39 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 Gene3D G3DSA:1.10.10.60 264 311 1.0E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 Pfam PF01965 DJ-1/PfpI family 11 169 4.0E-8 T 23-04-2016 IPR002818 DJ-1/PfpI LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 PANTHER PTHR11019:SF90 51 309 6.0E-142 T 23-04-2016 LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 PANTHER PTHR11019:SF90 1 26 6.0E-142 T 23-04-2016 LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 Gene3D G3DSA:1.10.10.60 216 263 1.4E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 Gene3D G3DSA:3.40.50.880 5 215 9.3E-35 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 SUPERFAMILY SSF46689 262 311 3.23E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 PANTHER PTHR11019 51 309 6.0E-142 T 23-04-2016 LT40_RS17485 1d6b5e0c0803279e8558f1a915ae11b1 315 PANTHER PTHR11019 1 26 6.0E-142 T 23-04-2016 LT40_RS15905 9cc4671fc11218051a1780b8137667ef 270 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 263 36.857 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LT40_RS15905 9cc4671fc11218051a1780b8137667ef 270 SUPERFAMILY SSF51366 1 245 5.18E-91 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LT40_RS15905 9cc4671fc11218051a1780b8137667ef 270 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 23-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LT40_RS15905 9cc4671fc11218051a1780b8137667ef 270 Pfam PF00290 Tryptophan synthase alpha chain 8 263 2.9E-99 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LT40_RS15905 9cc4671fc11218051a1780b8137667ef 270 Gene3D G3DSA:3.20.20.70 2 266 6.4E-104 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS15905 9cc4671fc11218051a1780b8137667ef 270 PANTHER PTHR10314 74 130 9.8E-26 T 23-04-2016 LT40_RS15905 9cc4671fc11218051a1780b8137667ef 270 PANTHER PTHR10314 1 51 9.8E-26 T 23-04-2016 LT40_RS15905 9cc4671fc11218051a1780b8137667ef 270 PANTHER PTHR10314:SF4 74 130 9.8E-26 T 23-04-2016 LT40_RS15905 9cc4671fc11218051a1780b8137667ef 270 PANTHER PTHR10314:SF4 1 51 9.8E-26 T 23-04-2016 LT40_RS15905 9cc4671fc11218051a1780b8137667ef 270 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 260 1.1E-81 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LT40_RS02260 bd25be1d3d51b028c08d57daebf10581 433 Gene3D G3DSA:1.20.1250.20 6 180 4.3E-14 T 23-04-2016 LT40_RS02260 bd25be1d3d51b028c08d57daebf10581 433 Gene3D G3DSA:1.20.1250.20 203 374 8.8E-23 T 23-04-2016 LT40_RS02260 bd25be1d3d51b028c08d57daebf10581 433 Pfam PF07690 Major Facilitator Superfamily 12 282 1.3E-16 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS02260 bd25be1d3d51b028c08d57daebf10581 433 PANTHER PTHR23521:SF2 2 416 4.4E-190 T 23-04-2016 LT40_RS02260 bd25be1d3d51b028c08d57daebf10581 433 SUPERFAMILY SSF103473 5 371 1.19E-45 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS02260 bd25be1d3d51b028c08d57daebf10581 433 PANTHER PTHR23521 2 416 4.4E-190 T 23-04-2016 LT40_RS05755 df6861b890cee5fa33dc66964bf880e0 694 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 649 690 5.2E-10 T 23-04-2016 IPR020011 Motility protein FimV, C-terminal LT40_RS16005 e2e58f1a3278f1d35c42432ee88397ef 256 PANTHER PTHR10434:SF11 1 247 1.0E-52 T 23-04-2016 LT40_RS16005 e2e58f1a3278f1d35c42432ee88397ef 256 PANTHER PTHR10434 1 247 1.0E-52 T 23-04-2016 LT40_RS16005 e2e58f1a3278f1d35c42432ee88397ef 256 Pfam PF01553 Acyltransferase 63 187 8.7E-23 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LT40_RS16005 e2e58f1a3278f1d35c42432ee88397ef 256 SMART SM00563 76 190 2.0E-31 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LT40_RS16005 e2e58f1a3278f1d35c42432ee88397ef 256 SUPERFAMILY SSF69593 18 220 1.57E-37 T 23-04-2016 LT40_RS16005 e2e58f1a3278f1d35c42432ee88397ef 256 Gene3D G3DSA:3.40.1130.10 68 218 3.1E-20 T 23-04-2016 LT40_RS20295 2822d3071cb16bc10b48bea87dcefab4 544 Pfam PF08479 POTRA domain, ShlB-type 67 140 5.8E-12 T 23-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type LT40_RS20295 2822d3071cb16bc10b48bea87dcefab4 544 Gene3D G3DSA:3.10.20.310 62 120 5.5E-9 T 23-04-2016 LT40_RS20295 2822d3071cb16bc10b48bea87dcefab4 544 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 159 522 4.8E-33 T 23-04-2016 IPR005565 Haemolysin activator HlyB LT40_RS20295 2822d3071cb16bc10b48bea87dcefab4 544 PIRSF PIRSF029745 3 544 1.3E-105 T 23-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 LT40_RS20295 2822d3071cb16bc10b48bea87dcefab4 544 PANTHER PTHR34597 4 544 2.2E-78 T 23-04-2016 LT40_RS20295 2822d3071cb16bc10b48bea87dcefab4 544 PANTHER PTHR34597:SF2 4 544 2.2E-78 T 23-04-2016 LT40_RS20295 2822d3071cb16bc10b48bea87dcefab4 544 Gene3D G3DSA:2.40.160.50 171 544 1.3E-66 T 23-04-2016 LT40_RS05265 4ed40ea89f6af19b5a662d16743c049a 398 Gene3D G3DSA:3.40.640.10 48 317 3.6E-102 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS05265 4ed40ea89f6af19b5a662d16743c049a 398 PRINTS PR00799 Aspartate aminotransferase signature 208 220 6.6E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LT40_RS05265 4ed40ea89f6af19b5a662d16743c049a 398 PRINTS PR00799 Aspartate aminotransferase signature 177 196 6.6E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LT40_RS05265 4ed40ea89f6af19b5a662d16743c049a 398 PRINTS PR00799 Aspartate aminotransferase signature 343 361 6.6E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LT40_RS05265 4ed40ea89f6af19b5a662d16743c049a 398 PRINTS PR00799 Aspartate aminotransferase signature 275 300 6.6E-38 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LT40_RS05265 4ed40ea89f6af19b5a662d16743c049a 398 PANTHER PTHR11879 1 397 8.6E-233 T 23-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 LT40_RS05265 4ed40ea89f6af19b5a662d16743c049a 398 SUPERFAMILY SSF53383 1 397 2.38E-111 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS05265 4ed40ea89f6af19b5a662d16743c049a 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 245 258 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 LT40_RS05265 4ed40ea89f6af19b5a662d16743c049a 398 PANTHER PTHR11879:SF11 1 397 8.6E-233 T 23-04-2016 LT40_RS05265 4ed40ea89f6af19b5a662d16743c049a 398 Pfam PF00155 Aminotransferase class I and II 28 394 1.2E-80 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 PIRSF PIRSF000414 4 535 1.3E-215 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 SUPERFAMILY SSF53927 222 535 4.21E-128 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 SUPERFAMILY SSF52335 10 197 3.53E-67 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 11 535 1.2E-233 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 Gene3D G3DSA:3.40.50.1380 9 191 4.8E-80 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 SMART SM00851 22 135 1.3E-56 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 SMART SM00798 140 467 3.6E-207 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 Pfam PF02142 MGS-like domain 22 135 3.0E-26 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 PANTHER PTHR11692:SF2 8 535 0.0 T 23-04-2016 LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 Gene3D G3DSA:3.40.140.20 254 376 8.8E-46 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 10 535 44.537 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 PANTHER PTHR11692 8 535 0.0 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 Pfam PF01808 AICARFT/IMPCHase bienzyme 140 466 1.5E-116 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LT40_RS13475 5313ea323fec52799005f47af9fb982d 535 Gene3D G3DSA:3.40.140.20 383 525 2.6E-61 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 LT40_RS06090 829fbef3be20b4e048fd688a82507514 312 SMART SM00450 114 215 3.0E-15 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS06090 829fbef3be20b4e048fd688a82507514 312 Pfam PF00581 Rhodanese-like domain 117 210 4.2E-6 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS06090 829fbef3be20b4e048fd688a82507514 312 Gene3D G3DSA:3.40.250.10 104 227 3.0E-38 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS06090 829fbef3be20b4e048fd688a82507514 312 PANTHER PTHR22778:SF12 3 291 4.4E-106 T 23-04-2016 LT40_RS06090 829fbef3be20b4e048fd688a82507514 312 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 255 45.696 T 23-04-2016 IPR020936 Uncharacterised protein family UPF0176 LT40_RS06090 829fbef3be20b4e048fd688a82507514 312 PANTHER PTHR22778 3 291 4.4E-106 T 23-04-2016 LT40_RS06090 829fbef3be20b4e048fd688a82507514 312 SUPERFAMILY SSF52821 91 226 3.98E-30 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS13940 b6d24f8b9ad1492beef5700fda30cefb 498 Pfam PF10144 Bacterial virulence factor haemolysin 27 156 4.3E-7 T 23-04-2016 IPR019305 Uncharacterised protein family Smp LT40_RS13940 b6d24f8b9ad1492beef5700fda30cefb 498 Pfam PF00672 HAMP domain 169 224 1.9E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS03445 d3fb606cfd6de21561b6590422021ded 243 Gene3D G3DSA:3.40.225.10 6 217 2.4E-48 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS03445 d3fb606cfd6de21561b6590422021ded 243 SUPERFAMILY SSF53639 6 218 6.67E-54 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS03445 d3fb606cfd6de21561b6590422021ded 243 PANTHER PTHR10672 6 214 2.5E-56 T 23-04-2016 LT40_RS03445 d3fb606cfd6de21561b6590422021ded 243 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 191 1.1E-38 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS03445 d3fb606cfd6de21561b6590422021ded 243 SMART SM01007 11 192 1.0E-45 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS11345 98b7ffc583e0d9bde7259a512c9e4519 251 Pfam PF03958 Bacterial type II/III secretion system short domain 22 80 2.3E-8 T 23-04-2016 IPR005644 NolW-like LT40_RS11345 98b7ffc583e0d9bde7259a512c9e4519 251 Pfam PF00263 Bacterial type II and III secretion system protein 123 225 9.2E-6 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.3E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.3E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.3E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 SUPERFAMILY SSF52172 3 179 9.42E-25 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 206 4.5E-18 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 Gene3D G3DSA:1.10.10.10 138 209 2.8E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 PANTHER PTHR26402:SF474 4 210 7.7E-77 T 23-04-2016 LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 Gene3D G3DSA:3.40.50.2300 3 132 9.8E-28 T 23-04-2016 LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 Pfam PF00072 Response regulator receiver domain 6 119 2.0E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 SMART SM00448 4 119 5.0E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 PANTHER PTHR26402 4 210 7.7E-77 T 23-04-2016 LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 SMART SM00421 150 207 1.3E-23 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS00605 c102987806273883f1c4ee533d488dd6 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS08025 ffd15325c64d05fb1ce35a71fab23a26 215 PANTHER PTHR10204:SF4 1 204 1.5E-36 T 23-04-2016 LT40_RS08025 ffd15325c64d05fb1ce35a71fab23a26 215 SUPERFAMILY SSF52218 1 208 2.1E-44 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS08025 ffd15325c64d05fb1ce35a71fab23a26 215 Pfam PF02525 Flavodoxin-like fold 1 202 1.3E-38 T 23-04-2016 IPR003680 Flavodoxin-like fold LT40_RS08025 ffd15325c64d05fb1ce35a71fab23a26 215 Gene3D G3DSA:3.40.50.360 1 205 2.4E-51 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS08025 ffd15325c64d05fb1ce35a71fab23a26 215 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 207 23.649 T 23-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 LT40_RS08025 ffd15325c64d05fb1ce35a71fab23a26 215 PANTHER PTHR10204 1 204 1.5E-36 T 23-04-2016 LT40_RS14340 f7f7ed2ee792a0ee0a6307c5c34ed404 235 Pfam PF04452 RNA methyltransferase 18 234 3.4E-44 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS14340 f7f7ed2ee792a0ee0a6307c5c34ed404 235 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 14 232 1.8E-25 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS14340 f7f7ed2ee792a0ee0a6307c5c34ed404 235 SUPERFAMILY SSF75217 72 234 2.09E-35 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases LT40_RS14340 f7f7ed2ee792a0ee0a6307c5c34ed404 235 PANTHER PTHR30027:SF3 7 234 1.7E-42 T 23-04-2016 LT40_RS14340 f7f7ed2ee792a0ee0a6307c5c34ed404 235 Gene3D G3DSA:3.40.1280.10 1 234 1.4E-57 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LT40_RS14340 f7f7ed2ee792a0ee0a6307c5c34ed404 235 PIRSF PIRSF015601 1 235 9.6E-51 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS14340 f7f7ed2ee792a0ee0a6307c5c34ed404 235 PANTHER PTHR30027 7 234 1.7E-42 T 23-04-2016 LT40_RS07705 e68e483795237b47b0d7f2c9af32368b 182 SUPERFAMILY SSF48498 72 158 3.91E-9 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LT40_RS07705 e68e483795237b47b0d7f2c9af32368b 182 Gene3D G3DSA:1.10.357.10 2 152 3.5E-23 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS07705 e68e483795237b47b0d7f2c9af32368b 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.1E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS07705 e68e483795237b47b0d7f2c9af32368b 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 3.4E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS07705 e68e483795237b47b0d7f2c9af32368b 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 3.4E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS07705 e68e483795237b47b0d7f2c9af32368b 182 PANTHER PTHR30328:SF4 3 86 5.2E-15 T 23-04-2016 LT40_RS07705 e68e483795237b47b0d7f2c9af32368b 182 PANTHER PTHR30328 3 86 5.2E-15 T 23-04-2016 LT40_RS07705 e68e483795237b47b0d7f2c9af32368b 182 SUPERFAMILY SSF46689 2 73 6.98E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS06065 1364514dd88ad99391c815a73cf7ce89 263 SUPERFAMILY SSF53850 14 240 6.85E-24 T 23-04-2016 LT40_RS06065 1364514dd88ad99391c815a73cf7ce89 263 Gene3D G3DSA:3.40.190.10 107 196 5.5E-5 T 23-04-2016 LT40_RS06065 1364514dd88ad99391c815a73cf7ce89 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 19 238 3.1E-13 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS06065 1364514dd88ad99391c815a73cf7ce89 263 Gene3D G3DSA:3.40.190.10 16 81 2.5E-6 T 23-04-2016 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 PANTHER PTHR12128:SF34 1 292 2.7E-146 T 23-04-2016 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 Gene3D G3DSA:3.20.20.70 1 291 1.7E-123 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 68.877 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 PIRSF PIRSF001365 1 291 1.3E-99 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 SMART SM01130 1 289 6.4E-149 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.1E-108 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 SUPERFAMILY SSF51569 2 288 3.45E-106 T 23-04-2016 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 PANTHER PTHR12128 1 292 2.7E-146 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 4.0E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 4.0E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 4.0E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 4.0E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 287 2.0E-114 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS00165 58490f3797f2f87eb0292452e934a8a9 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS13185 c27e12acc8416301130de7c960de7903 308 SUPERFAMILY SSF46785 7 118 4.52E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13185 c27e12acc8416301130de7c960de7903 308 Gene3D G3DSA:1.10.10.10 8 90 1.2E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13185 c27e12acc8416301130de7c960de7903 308 PANTHER PTHR30579 3 296 6.3E-72 T 23-04-2016 LT40_RS13185 c27e12acc8416301130de7c960de7903 308 Gene3D G3DSA:3.40.190.10 99 198 1.9E-15 T 23-04-2016 LT40_RS13185 c27e12acc8416301130de7c960de7903 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 70 6.0E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS13185 c27e12acc8416301130de7c960de7903 308 SUPERFAMILY SSF53850 97 296 9.59E-34 T 23-04-2016 LT40_RS13185 c27e12acc8416301130de7c960de7903 308 PANTHER PTHR30579:SF3 3 296 6.3E-72 T 23-04-2016 LT40_RS13185 c27e12acc8416301130de7c960de7903 308 Pfam PF03466 LysR substrate binding domain 97 293 6.5E-28 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS19805 81a7fac9bde219ba4366b582e6c74a55 313 PANTHER PTHR10210 2 313 3.0E-182 T 23-04-2016 LT40_RS19805 81a7fac9bde219ba4366b582e6c74a55 313 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 313 48.092 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LT40_RS19805 81a7fac9bde219ba4366b582e6c74a55 313 SUPERFAMILY SSF53271 69 305 7.26E-66 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS19805 81a7fac9bde219ba4366b582e6c74a55 313 PANTHER PTHR10210:SF41 2 313 3.0E-182 T 23-04-2016 LT40_RS19805 81a7fac9bde219ba4366b582e6c74a55 313 SMART SM01400 4 121 9.3E-77 T 23-04-2016 LT40_RS19805 81a7fac9bde219ba4366b582e6c74a55 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 313 7.0E-125 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LT40_RS19805 81a7fac9bde219ba4366b582e6c74a55 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 LT40_RS19805 81a7fac9bde219ba4366b582e6c74a55 313 Gene3D G3DSA:3.40.50.2020 2 159 3.0E-75 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS19805 81a7fac9bde219ba4366b582e6c74a55 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 202 313 8.5E-34 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LT40_RS19805 81a7fac9bde219ba4366b582e6c74a55 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 6.2E-49 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 LT40_RS19805 81a7fac9bde219ba4366b582e6c74a55 313 Gene3D G3DSA:3.40.50.2020 160 286 1.3E-55 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS14420 ce8ecdc4881afb3b8ec1381b1610203a 816 PIRSF PIRSF000460 2 816 8.2E-224 T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LT40_RS14420 ce8ecdc4881afb3b8ec1381b1610203a 816 Pfam PF00343 Carbohydrate phosphorylase 100 813 2.5E-300 T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LT40_RS14420 ce8ecdc4881afb3b8ec1381b1610203a 816 Gene3D G3DSA:3.40.50.2000 9 482 4.2E-198 T 23-04-2016 LT40_RS14420 ce8ecdc4881afb3b8ec1381b1610203a 816 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 13 813 0.0 T 23-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LT40_RS14420 ce8ecdc4881afb3b8ec1381b1610203a 816 PANTHER PTHR11468 11 813 0.0 T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LT40_RS14420 ce8ecdc4881afb3b8ec1381b1610203a 816 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 658 670 - T 23-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 LT40_RS14420 ce8ecdc4881afb3b8ec1381b1610203a 816 PANTHER PTHR11468:SF3 11 813 0.0 T 23-04-2016 LT40_RS14420 ce8ecdc4881afb3b8ec1381b1610203a 816 SUPERFAMILY SSF53756 8 813 0.0 T 23-04-2016 LT40_RS14420 ce8ecdc4881afb3b8ec1381b1610203a 816 Gene3D G3DSA:3.40.50.2000 483 799 5.3E-121 T 23-04-2016 LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 195 6.5E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 211 6.5E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 211 223 6.5E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 SUPERFAMILY SSF75516 12 150 2.35E-23 T 23-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 SMART SM00421 178 235 4.9E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 Pfam PF00196 Bacterial regulatory proteins, luxR family 181 235 1.6E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 PANTHER PTHR26402:SF432 44 235 1.2E-15 T 23-04-2016 LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 Gene3D G3DSA:1.10.10.10 184 241 6.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 Pfam PF03472 Autoinducer binding domain 27 152 7.5E-21 T 23-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 Gene3D G3DSA:3.30.450.80 12 183 3.6E-24 T 23-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 SUPERFAMILY SSF46894 170 241 9.18E-16 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS00215 061a908be7a0ab38fdca31138959dcf6 241 PANTHER PTHR26402 44 235 1.2E-15 T 23-04-2016 LT40_RS03815 40b9220630028f37901f65995a03a303 324 PANTHER PTHR38418 5 197 9.3E-39 T 23-04-2016 LT40_RS03815 40b9220630028f37901f65995a03a303 324 PIRSF PIRSF004692 1 324 1.5E-131 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LT40_RS03815 40b9220630028f37901f65995a03a303 324 Gene3D G3DSA:3.40.50.10490 10 195 3.0E-51 T 23-04-2016 LT40_RS03815 40b9220630028f37901f65995a03a303 324 PANTHER PTHR38418:SF1 5 197 9.3E-39 T 23-04-2016 LT40_RS03815 40b9220630028f37901f65995a03a303 324 Pfam PF01380 SIS domain 41 172 1.4E-32 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LT40_RS03815 40b9220630028f37901f65995a03a303 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 312 1.7E-110 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 LT40_RS03815 40b9220630028f37901f65995a03a303 324 Pfam PF00571 CBS domain 269 321 9.1E-7 T 23-04-2016 IPR000644 CBS domain LT40_RS03815 40b9220630028f37901f65995a03a303 324 Pfam PF00571 CBS domain 211 257 0.0012 T 23-04-2016 IPR000644 CBS domain LT40_RS03815 40b9220630028f37901f65995a03a303 324 SMART SM00116 275 323 2.0 T 23-04-2016 IPR000644 CBS domain LT40_RS03815 40b9220630028f37901f65995a03a303 324 SMART SM00116 210 258 5.8 T 23-04-2016 IPR000644 CBS domain LT40_RS03815 40b9220630028f37901f65995a03a303 324 SUPERFAMILY SSF53697 8 321 6.01E-70 T 23-04-2016 LT40_RS03815 40b9220630028f37901f65995a03a303 324 Gene3D G3DSA:3.10.580.10 196 321 8.0E-38 T 23-04-2016 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 8.9E-246 T 23-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Gene3D G3DSA:2.70.20.10 344 480 1.2E-33 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Gene3D G3DSA:2.70.20.10 220 341 5.4E-33 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 SUPERFAMILY SSF57783 704 747 1.55E-9 T 23-04-2016 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 SUPERFAMILY SSF57783 813 869 1.39E-20 T 23-04-2016 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 SMART SM00437 279 534 3.5E-113 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Gene3D G3DSA:1.10.460.10 481 585 1.3E-57 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Gene3D G3DSA:1.10.460.10 171 218 1.3E-57 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Pfam PF01751 Toprim domain 5 149 2.0E-32 T 23-04-2016 IPR006171 Toprim domain LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 PANTHER PTHR11390 1 37 0.0 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 PANTHER PTHR11390 74 780 0.0 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Gene3D G3DSA:3.30.65.10 749 810 2.7E-22 T 23-04-2016 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Gene3D G3DSA:3.30.65.10 709 747 4.0E-13 T 23-04-2016 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Gene3D G3DSA:3.30.65.10 598 629 9.8E-11 T 23-04-2016 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 SUPERFAMILY SSF56712 3 614 7.19E-201 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 SMART SM00436 140 228 1.1E-48 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 727 56.157 T 23-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 714 748 2.2E-12 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 603 627 1.4E-4 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 1.7E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 497 511 1.7E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 1.7E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 1.7E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 1.7E-37 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 SMART SM00493 3 139 1.4E-28 T 23-04-2016 IPR006171 Toprim domain LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 PANTHER PTHR11390:SF27 1 37 0.0 T 23-04-2016 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 PANTHER PTHR11390:SF27 74 780 0.0 T 23-04-2016 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Pfam PF01131 DNA topoisomerase 164 572 4.6E-128 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Gene3D G3DSA:3.40.50.140 1 170 1.7E-57 T 23-04-2016 IPR006171 Toprim domain LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Gene3D G3DSA:2.20.25.10 812 869 2.0E-27 T 23-04-2016 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Pfam PF08272 Topoisomerase I zinc-ribbon-like 762 797 1.3E-11 T 23-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 867 2.7E-16 T 23-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 LT40_RS07290 69d3bafda52891149e74ef7788d3527d 870 SUPERFAMILY SSF57783 748 810 1.31E-16 T 23-04-2016 LT40_RS14395 6898fac88176c5c0962fd467af34b810 283 SUPERFAMILY SSF161098 87 271 1.83E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS14395 6898fac88176c5c0962fd467af34b810 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 268 1.3E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS14395 6898fac88176c5c0962fd467af34b810 283 PANTHER PTHR30177:SF10 6 283 2.6E-170 T 23-04-2016 LT40_RS14395 6898fac88176c5c0962fd467af34b810 283 PANTHER PTHR30177 6 283 2.6E-170 T 23-04-2016 LT40_RS14395 6898fac88176c5c0962fd467af34b810 283 Gene3D G3DSA:1.10.3720.10 87 270 4.2E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS19750 e729f8e5b5803c464f0ae812e6edc31d 226 SMART SM00702 1 177 2.5E-24 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 LT40_RS19750 e729f8e5b5803c464f0ae812e6edc31d 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 5.0E-11 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 LT40_RS19750 e729f8e5b5803c464f0ae812e6edc31d 226 PANTHER PTHR41536:SF1 2 226 1.1E-119 T 23-04-2016 LT40_RS19750 e729f8e5b5803c464f0ae812e6edc31d 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 44.45 T 23-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 LT40_RS19750 e729f8e5b5803c464f0ae812e6edc31d 226 PANTHER PTHR41536 2 226 1.1E-119 T 23-04-2016 LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PANTHER PTHR24322 161 192 1.9E-72 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PANTHER PTHR24322 16 145 1.9E-72 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 Gene3D G3DSA:3.40.50.720 5 254 5.8E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 4.6E-65 T 23-04-2016 LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 7.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 7.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 7.0E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 SUPERFAMILY SSF51735 10 254 1.08E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PANTHER PTHR24322:SF409 161 192 1.9E-72 T 23-04-2016 LT40_RS12660 66a5fda4f14480dba55a19c0a6c25a17 255 PANTHER PTHR24322:SF409 16 145 1.9E-72 T 23-04-2016 LT40_RS05835 40ea3a36603a7cfcbbbb674dd6258261 427 PANTHER PTHR11601 310 417 1.9E-117 T 23-04-2016 LT40_RS05835 40ea3a36603a7cfcbbbb674dd6258261 427 PANTHER PTHR11601 8 293 1.9E-117 T 23-04-2016 LT40_RS05835 40ea3a36603a7cfcbbbb674dd6258261 427 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 17 417 3.3E-115 T 23-04-2016 IPR011340 Cysteine desulfurase-related LT40_RS05835 40ea3a36603a7cfcbbbb674dd6258261 427 SUPERFAMILY SSF53383 17 425 2.2E-80 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS05835 40ea3a36603a7cfcbbbb674dd6258261 427 Gene3D G3DSA:3.40.640.10 45 274 5.7E-53 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS05835 40ea3a36603a7cfcbbbb674dd6258261 427 Pfam PF00266 Aminotransferase class-V 306 413 5.6E-9 T 23-04-2016 IPR000192 Aminotransferase class V domain LT40_RS05835 40ea3a36603a7cfcbbbb674dd6258261 427 Pfam PF00266 Aminotransferase class-V 34 255 3.4E-50 T 23-04-2016 IPR000192 Aminotransferase class V domain LT40_RS05835 40ea3a36603a7cfcbbbb674dd6258261 427 PANTHER PTHR11601:SF22 310 417 1.9E-117 T 23-04-2016 LT40_RS05835 40ea3a36603a7cfcbbbb674dd6258261 427 PANTHER PTHR11601:SF22 8 293 1.9E-117 T 23-04-2016 LT40_RS05835 40ea3a36603a7cfcbbbb674dd6258261 427 Gene3D G3DSA:3.90.1150.10 275 424 3.6E-25 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS11630 54e06ddb55946e4d7cd2e1b5fbdf2c62 382 SUPERFAMILY SSF55821 2 202 1.42E-84 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LT40_RS11630 54e06ddb55946e4d7cd2e1b5fbdf2c62 382 Pfam PF00925 GTP cyclohydrolase II 208 365 8.2E-27 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LT40_RS11630 54e06ddb55946e4d7cd2e1b5fbdf2c62 382 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 1.8E-70 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS11630 54e06ddb55946e4d7cd2e1b5fbdf2c62 382 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 4.2E-81 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS11630 54e06ddb55946e4d7cd2e1b5fbdf2c62 382 SUPERFAMILY SSF142695 204 366 2.35E-38 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LT40_RS11630 54e06ddb55946e4d7cd2e1b5fbdf2c62 382 PANTHER PTHR21327:SF6 1 373 8.6E-136 T 23-04-2016 LT40_RS11630 54e06ddb55946e4d7cd2e1b5fbdf2c62 382 PANTHER PTHR21327 1 373 8.6E-136 T 23-04-2016 LT40_RS11630 54e06ddb55946e4d7cd2e1b5fbdf2c62 382 PIRSF PIRSF001259 1 376 5.7E-112 T 23-04-2016 LT40_RS11630 54e06ddb55946e4d7cd2e1b5fbdf2c62 382 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.52 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS11630 54e06ddb55946e4d7cd2e1b5fbdf2c62 382 Gene3D G3DSA:3.90.870.10 1 210 2.9E-97 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LT40_RS06750 61223f5fcf272dd8a1a3cca60cab9891 168 SUPERFAMILY SSF55068 4 162 7.46E-64 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LT40_RS06750 61223f5fcf272dd8a1a3cca60cab9891 168 PANTHER PTHR10173 4 154 1.6E-68 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 LT40_RS06750 61223f5fcf272dd8a1a3cca60cab9891 168 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 154 1.1E-48 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LT40_RS06750 61223f5fcf272dd8a1a3cca60cab9891 168 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 160 33.863 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LT40_RS06750 61223f5fcf272dd8a1a3cca60cab9891 168 Pfam PF01625 Peptide methionine sulfoxide reductase 7 154 4.5E-56 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LT40_RS06750 61223f5fcf272dd8a1a3cca60cab9891 168 Gene3D G3DSA:3.30.1060.10 4 155 3.1E-64 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 LT40_RS06750 61223f5fcf272dd8a1a3cca60cab9891 168 PANTHER PTHR10173:SF6 4 154 1.6E-68 T 23-04-2016 LT40_RS00625 ce6dbe16cd04089462e1d942d4482501 230 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 142 1.8E-47 T 23-04-2016 IPR023370 TsaA-like domain LT40_RS00625 ce6dbe16cd04089462e1d942d4482501 230 PANTHER PTHR12818:SF6 3 227 1.4E-102 T 23-04-2016 LT40_RS00625 ce6dbe16cd04089462e1d942d4482501 230 Gene3D G3DSA:2.40.30.70 3 146 4.7E-55 T 23-04-2016 IPR023370 TsaA-like domain LT40_RS00625 ce6dbe16cd04089462e1d942d4482501 230 ProSitePatterns PS01318 TsaA-like domain signature. 86 97 - T 23-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site LT40_RS00625 ce6dbe16cd04089462e1d942d4482501 230 SUPERFAMILY SSF118196 2 218 9.55E-76 T 23-04-2016 IPR023370 TsaA-like domain LT40_RS00625 ce6dbe16cd04089462e1d942d4482501 230 Pfam PF01980 Uncharacterised protein family UPF0066 20 138 2.5E-43 T 23-04-2016 IPR023370 TsaA-like domain LT40_RS00625 ce6dbe16cd04089462e1d942d4482501 230 PANTHER PTHR12818 3 227 1.4E-102 T 23-04-2016 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 Gene3D G3DSA:1.10.8.50 131 270 5.6E-46 T 23-04-2016 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 PANTHER PTHR22993:SF15 1 270 2.0E-126 T 23-04-2016 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 SUPERFAMILY SSF81624 2 135 5.76E-41 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 Pfam PF06827 Zinc finger found in FPG and IleRS 242 270 4.1E-10 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 7.2E-35 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 SMART SM00898 2 116 3.1E-54 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 Gene3D G3DSA:3.20.190.10 2 130 3.2E-40 T 23-04-2016 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 SUPERFAMILY SSF46946 131 222 7.46E-27 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 3.9E-89 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 SUPERFAMILY SSF57716 218 270 1.88E-16 T 23-04-2016 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 245 269 - T 23-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 SMART SM01232 130 222 5.7E-43 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 PANTHER PTHR22993 1 270 2.0E-126 T 23-04-2016 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 44.101 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 LT40_RS14725 4835e2effb0d4cb390b28aea88475b08 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 219 1.8E-21 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LT40_RS17265 9ad106babed3c7da7b08cc51f96c74ec 181 SUPERFAMILY SSF51182 1 178 9.54E-77 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS17265 9ad106babed3c7da7b08cc51f96c74ec 181 Gene3D G3DSA:2.60.120.10 1 178 1.5E-82 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS17265 9ad106babed3c7da7b08cc51f96c74ec 181 PANTHER PTHR21047:SF2 1 179 7.0E-74 T 23-04-2016 LT40_RS17265 9ad106babed3c7da7b08cc51f96c74ec 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 4.3E-74 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LT40_RS17265 9ad106babed3c7da7b08cc51f96c74ec 181 PANTHER PTHR21047 1 179 7.0E-74 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LT40_RS17265 9ad106babed3c7da7b08cc51f96c74ec 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 181 7.0E-84 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LT40_RS17265 9ad106babed3c7da7b08cc51f96c74ec 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 177 1.8E-82 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LT40_RS14330 511f545406a6b543a30829787528346e 158 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 7.5E-18 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 LT40_RS14330 511f545406a6b543a30829787528346e 158 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 7.5E-18 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 LT40_RS14330 511f545406a6b543a30829787528346e 158 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 7.5E-18 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 LT40_RS14330 511f545406a6b543a30829787528346e 158 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 154 15.928 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 LT40_RS14330 511f545406a6b543a30829787528346e 158 PANTHER PTHR33162 1 152 1.3E-22 T 23-04-2016 LT40_RS14330 511f545406a6b543a30829787528346e 158 PANTHER PTHR33162:SF4 1 152 1.3E-22 T 23-04-2016 LT40_RS14330 511f545406a6b543a30829787528346e 158 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 75 6.5E-23 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 LT40_RS14330 511f545406a6b543a30829787528346e 158 Pfam PF02416 mttA/Hcf106 family 4 40 4.2E-7 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 LT40_RS20590 d97a425297f5faf8bcdbffe89f856f9b 270 PIRSF PIRSF018249 1 269 1.7E-88 T 23-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 LT40_RS20590 d97a425297f5faf8bcdbffe89f856f9b 270 PANTHER PTHR10108 20 269 1.8E-52 T 23-04-2016 LT40_RS20590 d97a425297f5faf8bcdbffe89f856f9b 270 SUPERFAMILY SSF53335 1 248 2.15E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS20590 d97a425297f5faf8bcdbffe89f856f9b 270 PANTHER PTHR10108:SF886 20 269 1.8E-52 T 23-04-2016 LT40_RS20590 d97a425297f5faf8bcdbffe89f856f9b 270 Pfam PF13649 Methyltransferase domain 86 168 1.8E-11 T 23-04-2016 LT40_RS20590 d97a425297f5faf8bcdbffe89f856f9b 270 Gene3D G3DSA:3.40.50.150 62 190 8.0E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS09875 b6fae2f78f8c6d588a00a28b8b2028e8 313 SUPERFAMILY SSF53613 1 307 4.05E-83 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS09875 b6fae2f78f8c6d588a00a28b8b2028e8 313 Pfam PF00294 pfkB family carbohydrate kinase 5 303 3.6E-61 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB LT40_RS09875 b6fae2f78f8c6d588a00a28b8b2028e8 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 255 268 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LT40_RS09875 b6fae2f78f8c6d588a00a28b8b2028e8 313 PANTHER PTHR10584:SF186 1 309 1.4E-119 T 23-04-2016 LT40_RS09875 b6fae2f78f8c6d588a00a28b8b2028e8 313 Gene3D G3DSA:3.40.1190.20 2 308 2.8E-90 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS09875 b6fae2f78f8c6d588a00a28b8b2028e8 313 PANTHER PTHR10584 1 309 1.4E-119 T 23-04-2016 LT40_RS18505 ade42bca9047bb5a39ec7f67b2d8bc82 176 Pfam PF00436 Single-strand binding protein family 5 107 2.4E-38 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 LT40_RS18505 ade42bca9047bb5a39ec7f67b2d8bc82 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 176 1.8E-59 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LT40_RS18505 ade42bca9047bb5a39ec7f67b2d8bc82 176 PANTHER PTHR10302 1 176 6.8E-51 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LT40_RS18505 ade42bca9047bb5a39ec7f67b2d8bc82 176 SUPERFAMILY SSF50249 3 176 4.8E-60 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS18505 ade42bca9047bb5a39ec7f67b2d8bc82 176 Gene3D G3DSA:2.40.50.140 1 176 2.5E-54 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS18505 ade42bca9047bb5a39ec7f67b2d8bc82 176 Hamap MF_00984 Single-stranded DNA-binding protein. 5 115 36.189 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LT40_RS18505 ade42bca9047bb5a39ec7f67b2d8bc82 176 PIRSF PIRSF002070 1 173 1.9E-36 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 LT40_RS12470 3976fa37187155c36e50d3c980430a96 335 Pfam PF08447 PAS fold 43 116 1.8E-12 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS12470 3976fa37187155c36e50d3c980430a96 335 Pfam PF13581 Histidine kinase-like ATPase domain 234 330 1.4E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS12470 3976fa37187155c36e50d3c980430a96 335 Gene3D G3DSA:3.30.450.20 16 128 2.4E-24 T 23-04-2016 LT40_RS12470 3976fa37187155c36e50d3c980430a96 335 Pfam PF07568 Histidine kinase 143 212 5.8E-17 T 23-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain LT40_RS12470 3976fa37187155c36e50d3c980430a96 335 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 135 2.9E-14 T 23-04-2016 IPR000014 PAS domain LT40_RS12470 3976fa37187155c36e50d3c980430a96 335 SUPERFAMILY SSF55785 22 132 8.03E-24 T 23-04-2016 IPR000014 PAS domain LT40_RS12470 3976fa37187155c36e50d3c980430a96 335 PANTHER PTHR24423 16 291 2.0E-33 T 23-04-2016 LT40_RS12470 3976fa37187155c36e50d3c980430a96 335 SMART SM00091 17 83 8.4E-7 T 23-04-2016 IPR000014 PAS domain LT40_RS12470 3976fa37187155c36e50d3c980430a96 335 SUPERFAMILY SSF55874 209 333 2.1E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS12470 3976fa37187155c36e50d3c980430a96 335 SMART SM00086 89 130 1.1E-8 T 23-04-2016 IPR001610 PAC motif LT40_RS12470 3976fa37187155c36e50d3c980430a96 335 Gene3D G3DSA:3.30.565.10 208 333 4.4E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS17645 d838f3677d047e7070b7019a2cc8f4c1 279 SUPERFAMILY SSF53335 8 275 2.7E-86 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS17645 d838f3677d047e7070b7019a2cc8f4c1 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 276 1.4E-94 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 LT40_RS17645 d838f3677d047e7070b7019a2cc8f4c1 279 PANTHER PTHR37426 1 279 3.5E-133 T 23-04-2016 LT40_RS17645 d838f3677d047e7070b7019a2cc8f4c1 279 PANTHER PTHR37426:SF1 1 279 3.5E-133 T 23-04-2016 LT40_RS17645 d838f3677d047e7070b7019a2cc8f4c1 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LT40_RS17645 d838f3677d047e7070b7019a2cc8f4c1 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 160 166 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LT40_RS17645 d838f3677d047e7070b7019a2cc8f4c1 279 Gene3D G3DSA:3.40.50.150 1 278 6.4E-103 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS17645 d838f3677d047e7070b7019a2cc8f4c1 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 266 38.597 T 23-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 LT40_RS03990 9d0fb16ecd3fa4c3d70dedf33688ecc3 197 Pfam PF13580 SIS domain 15 146 2.0E-35 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LT40_RS03990 9d0fb16ecd3fa4c3d70dedf33688ecc3 197 PANTHER PTHR30390:SF5 3 197 4.2E-120 T 23-04-2016 LT40_RS03990 9d0fb16ecd3fa4c3d70dedf33688ecc3 197 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 2 192 37.265 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 LT40_RS03990 9d0fb16ecd3fa4c3d70dedf33688ecc3 197 PANTHER PTHR30390 3 197 4.2E-120 T 23-04-2016 LT40_RS03990 9d0fb16ecd3fa4c3d70dedf33688ecc3 197 Gene3D G3DSA:3.40.50.10490 2 194 2.2E-61 T 23-04-2016 LT40_RS03990 9d0fb16ecd3fa4c3d70dedf33688ecc3 197 SUPERFAMILY SSF53697 2 193 3.03E-57 T 23-04-2016 LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 Gene3D G3DSA:3.40.50.300 453 636 1.3E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 Pfam PF00271 Helicase conserved C-terminal domain 479 586 8.8E-17 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 PANTHER PTHR24031:SF249 260 282 4.6E-121 T 23-04-2016 LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 PANTHER PTHR24031:SF249 624 669 4.6E-121 T 23-04-2016 LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 PANTHER PTHR24031:SF249 299 600 4.6E-121 T 23-04-2016 LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 Gene3D G3DSA:3.40.50.300 260 452 8.4E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 663 1.0E-219 T 23-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 SUPERFAMILY SSF52540 317 598 8.78E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 Gene3D G3DSA:2.40.50.140 45 139 1.7E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 Pfam PF17191 RecG wedge domain 11 169 7.3E-16 T 23-04-2016 IPR033454 RecG, wedge domain LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 SUPERFAMILY SSF50249 7 172 1.88E-35 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 Pfam PF00270 DEAD/DEAH box helicase 293 429 3.0E-16 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 SMART SM00490 507 587 2.9E-18 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 SMART SM00487 265 458 1.5E-24 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 PANTHER PTHR24031 260 282 4.6E-121 T 23-04-2016 LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 PANTHER PTHR24031 624 669 4.6E-121 T 23-04-2016 LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 PANTHER PTHR24031 299 600 4.6E-121 T 23-04-2016 LT40_RS16440 d7cd866c0a1ca3319b36e204e8826241 691 Gene3D G3DSA:1.10.150.20 4 35 2.3E-4 T 23-04-2016 LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 SMART SM00912 64 185 1.3E-48 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Gene3D G3DSA:2.160.20.10 57 342 5.3E-95 T 23-04-2016 IPR012334 Pectin lyase fold LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05860 haemagglutination activity domain 61 184 6.0E-34 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF04830 Possible hemagglutinin (DUF637) 2418 2568 1.4E-24 T 23-04-2016 IPR006915 Domain of unknown function DUF637, haemagglutinin putative LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 SUPERFAMILY SSF51126 59 325 1.07E-61 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF13332 Haemagluttinin repeat 2000 2058 1.4E-4 T 23-04-2016 IPR025157 Haemagluttinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF13332 Haemagluttinin repeat 2126 2269 2.3E-11 T 23-04-2016 IPR025157 Haemagluttinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 82 180 1.1E-19 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 PANTHER PTHR32093 28 186 2.3E-63 T 23-04-2016 LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1126 1145 0.13 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 771 807 0.98 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 851 891 0.0018 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 892 931 2.5E-5 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 559 592 1.3E-7 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 418 456 1.9E-5 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 518 558 1.1 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1944 1980 0.053 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 811 850 2.1E-5 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1103 1140 0.0059 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 724 762 8.7E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1308 1344 0.43 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 704 734 5.6E-6 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 661 702 0.037 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1346 1384 2.1E-4 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 498 537 0.004 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1158 1184 0.12 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1488 1523 0.029 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 641 672 0.67 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 477 517 0.0013 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1208 1238 0.85 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 977 1018 2.9E-7 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 603 638 4.8E-5 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 457 495 1.2 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1026 1059 0.031 T 23-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 1883 1954 6.8 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 989 1044 1.6 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 575 638 0.0086 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 1599 1626 22.0 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 819 894 0.0085 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 698 774 59.0 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 464 537 0.02 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 1480 1519 0.73 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 1088 1164 0.012 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 1340 1398 76.0 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 312 368 0.31 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS15430 a98bb20e163a563b2be7b7d08d33e729 2909 Pfam PF05594 Haemagluttinin repeat 232 309 0.0019 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS03075 fcc631422e9e6e3c42d1c318bbd3e1df 393 Gene3D G3DSA:1.10.3720.10 256 388 1.4E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03075 fcc631422e9e6e3c42d1c318bbd3e1df 393 Gene3D G3DSA:1.10.3720.10 82 151 1.4E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03075 fcc631422e9e6e3c42d1c318bbd3e1df 393 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 84 147 3.9E-15 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS03075 fcc631422e9e6e3c42d1c318bbd3e1df 393 SUPERFAMILY SSF161098 183 374 8.63E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03075 fcc631422e9e6e3c42d1c318bbd3e1df 393 PANTHER PTHR30085 251 393 1.3E-150 T 23-04-2016 LT40_RS03075 fcc631422e9e6e3c42d1c318bbd3e1df 393 PANTHER PTHR30085 14 172 1.3E-150 T 23-04-2016 LT40_RS03075 fcc631422e9e6e3c42d1c318bbd3e1df 393 SUPERFAMILY SSF161098 83 168 1.28E-11 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03075 fcc631422e9e6e3c42d1c318bbd3e1df 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 388 5.9E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03075 fcc631422e9e6e3c42d1c318bbd3e1df 393 PANTHER PTHR30085:SF1 251 393 1.3E-150 T 23-04-2016 LT40_RS03075 fcc631422e9e6e3c42d1c318bbd3e1df 393 PANTHER PTHR30085:SF1 14 172 1.3E-150 T 23-04-2016 LT40_RS10825 e28a855a50cd43defb3fc6d41f3e872b 226 SUPERFAMILY SSF161098 6 218 2.62E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10825 e28a855a50cd43defb3fc6d41f3e872b 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 217 3.6E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10825 e28a855a50cd43defb3fc6d41f3e872b 226 PANTHER PTHR30183 1 222 3.1E-68 T 23-04-2016 LT40_RS10825 e28a855a50cd43defb3fc6d41f3e872b 226 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 216 3.2E-72 T 23-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 LT40_RS10825 e28a855a50cd43defb3fc6d41f3e872b 226 Gene3D G3DSA:1.10.3720.10 8 220 3.3E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13095 8ed6b56d463106f6fc314e54567349d8 342 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 305 1.0E-13 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS13095 8ed6b56d463106f6fc314e54567349d8 342 Gene3D G3DSA:3.40.50.300 7 264 9.6E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13095 8ed6b56d463106f6fc314e54567349d8 342 SMART SM00382 35 240 3.3E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS13095 8ed6b56d463106f6fc314e54567349d8 342 PANTHER PTHR24220:SF535 8 340 4.0E-144 T 23-04-2016 LT40_RS13095 8ed6b56d463106f6fc314e54567349d8 342 Pfam PF00005 ABC transporter 27 190 6.6E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS13095 8ed6b56d463106f6fc314e54567349d8 342 PANTHER PTHR24220 8 340 4.0E-144 T 23-04-2016 LT40_RS13095 8ed6b56d463106f6fc314e54567349d8 342 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 329 1.8E-20 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS13095 8ed6b56d463106f6fc314e54567349d8 342 SUPERFAMILY SSF52540 7 261 1.47E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13095 8ed6b56d463106f6fc314e54567349d8 342 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS18835 653be915caaf8af6b7ee6a576c4be9d6 215 Gene3D G3DSA:3.90.1550.10 6 202 2.2E-68 T 23-04-2016 LT40_RS18835 653be915caaf8af6b7ee6a576c4be9d6 215 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 37.758 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LT40_RS18835 653be915caaf8af6b7ee6a576c4be9d6 215 PIRSF PIRSF016262 1 213 9.3E-57 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LT40_RS18835 653be915caaf8af6b7ee6a576c4be9d6 215 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 3.0E-8 T 23-04-2016 LT40_RS18835 653be915caaf8af6b7ee6a576c4be9d6 215 Pfam PF03099 Biotin/lipoate A/B protein ligase family 61 158 3.8E-6 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LT40_RS18835 653be915caaf8af6b7ee6a576c4be9d6 215 PANTHER PTHR10993 7 178 5.2E-71 T 23-04-2016 LT40_RS18835 653be915caaf8af6b7ee6a576c4be9d6 215 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 200 1.4E-63 T 23-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LT40_RS18835 653be915caaf8af6b7ee6a576c4be9d6 215 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 23-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LT40_RS18835 653be915caaf8af6b7ee6a576c4be9d6 215 SUPERFAMILY SSF55681 7 204 3.65E-67 T 23-04-2016 LT40_RS04845 f7e3e41b5d15e071a0e5336ee41ff021 142 PANTHER PTHR30558 1 137 1.1E-41 T 23-04-2016 LT40_RS04845 f7e3e41b5d15e071a0e5336ee41ff021 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 135 3.4E-25 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 LT40_RS04845 f7e3e41b5d15e071a0e5336ee41ff021 142 PANTHER PTHR30558:SF5 1 137 1.1E-41 T 23-04-2016 LT40_RS05845 c5404561fab7f69f109e890e8dc8e4c4 307 PANTHER PTHR10587 14 303 5.2E-114 T 23-04-2016 LT40_RS05845 c5404561fab7f69f109e890e8dc8e4c4 307 SUPERFAMILY SSF88713 11 302 2.97E-78 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LT40_RS05845 c5404561fab7f69f109e890e8dc8e4c4 307 Pfam PF01522 Polysaccharide deacetylase 77 188 2.9E-17 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LT40_RS05845 c5404561fab7f69f109e890e8dc8e4c4 307 Gene3D G3DSA:3.20.20.370 11 302 7.3E-96 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LT40_RS05845 c5404561fab7f69f109e890e8dc8e4c4 307 PANTHER PTHR10587:SF72 14 303 5.2E-114 T 23-04-2016 LT40_RS18115 76cd64d9ecca7de8e4dfb3cf056fad5d 314 SUPERFAMILY SSF53474 64 118 6.26E-9 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS18115 76cd64d9ecca7de8e4dfb3cf056fad5d 314 SUPERFAMILY SSF53474 179 262 6.26E-9 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS18115 76cd64d9ecca7de8e4dfb3cf056fad5d 314 Gene3D G3DSA:3.40.50.1820 74 126 1.5E-12 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS18115 76cd64d9ecca7de8e4dfb3cf056fad5d 314 Gene3D G3DSA:3.40.50.1820 179 277 1.5E-12 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS18115 76cd64d9ecca7de8e4dfb3cf056fad5d 314 Pfam PF12048 Protein of unknown function (DUF3530) 8 311 1.4E-86 T 23-04-2016 IPR022529 Protein of unknown function DUF3530 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 Gene3D G3DSA:3.30.1360.120 4 121 3.1E-44 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 Pfam PF12631 MnmE helical domain 123 453 6.4E-55 T 23-04-2016 IPR025867 MnmE, helical domain LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 Gene3D G3DSA:3.40.50.300 206 247 4.6E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 456 2.2E-103 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 Pfam PF01926 50S ribosome-binding GTPase 218 307 4.1E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 PANTHER PTHR11649 9 456 2.3E-163 T 23-04-2016 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 5.0E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 286 304 5.0E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 120 4.2E-38 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 456 32.688 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 SUPERFAMILY SSF52540 73 152 6.9E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 SUPERFAMILY SSF52540 188 343 6.9E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 SUPERFAMILY SSF116878 381 456 4.58E-49 T 23-04-2016 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 SUPERFAMILY SSF116878 121 220 4.58E-49 T 23-04-2016 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 PANTHER PTHR11649:SF56 9 456 2.3E-163 T 23-04-2016 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 317 9.2E-20 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 Gene3D G3DSA:1.20.120.430 248 271 1.6E-57 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 Gene3D G3DSA:1.20.120.430 386 456 1.6E-57 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 LT40_RS16065 fdffdd15e8e0b8939e037ba7952acb3b 456 Gene3D G3DSA:1.20.120.430 122 182 1.6E-57 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 LT40_RS03045 332fe6a33aa9bd5681d745add0a94170 157 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 2 149 7.5E-69 T 23-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 LT40_RS03045 332fe6a33aa9bd5681d745add0a94170 157 Gene3D G3DSA:3.30.70.640 2 154 1.9E-68 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 LT40_RS03045 332fe6a33aa9bd5681d745add0a94170 157 PANTHER PTHR22960 2 155 7.0E-100 T 23-04-2016 LT40_RS03045 332fe6a33aa9bd5681d745add0a94170 157 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 155 35.538 T 23-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 LT40_RS03045 332fe6a33aa9bd5681d745add0a94170 157 SUPERFAMILY SSF55040 9 152 4.45E-61 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 LT40_RS03045 332fe6a33aa9bd5681d745add0a94170 157 Pfam PF01967 MoaC family 13 147 4.1E-55 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 LT40_RS17535 6bde4c4882fa24718c3f69bf763b0c0b 674 PANTHER PTHR23028:SF53 18 364 4.6E-69 T 23-04-2016 LT40_RS17535 6bde4c4882fa24718c3f69bf763b0c0b 674 Pfam PF01757 Acyltransferase family 20 352 2.1E-26 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LT40_RS17535 6bde4c4882fa24718c3f69bf763b0c0b 674 PANTHER PTHR23028 18 364 4.6E-69 T 23-04-2016 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 535 1.5E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 SUPERFAMILY SSF55874 361 535 1.57E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Gene3D G3DSA:3.30.565.10 374 540 4.3E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Pfam PF00512 His Kinase A (phospho-acceptor) domain 308 372 3.5E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 489 4.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 533 4.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 514 4.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 4.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 SUPERFAMILY SSF47384 290 372 3.73E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 257 2.1E-23 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Pfam PF01627 Hpt domain 701 770 7.5E-8 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 SMART SM00062 37 259 7.7E-12 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Gene3D G3DSA:3.40.190.10 126 212 3.5E-8 T 23-04-2016 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 SUPERFAMILY SSF53850 30 256 1.3E-30 T 23-04-2016 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 SMART SM00448 559 674 8.5E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 PANTHER PTHR24423:SF382 292 715 9.5E-115 T 23-04-2016 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 PANTHER PTHR24423:SF382 32 49 9.5E-115 T 23-04-2016 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 PANTHER PTHR24423 292 715 9.5E-115 T 23-04-2016 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 PANTHER PTHR24423 32 49 9.5E-115 T 23-04-2016 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Pfam PF00072 Response regulator receiver domain 561 671 1.8E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Gene3D G3DSA:1.20.120.160 669 779 6.2E-9 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Gene3D G3DSA:3.40.50.2300 559 668 4.2E-32 T 23-04-2016 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Gene3D G3DSA:1.10.287.130 299 368 3.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 SUPERFAMILY SSF47226 657 772 1.27E-11 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 SMART SM00387 419 536 1.1E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Gene3D G3DSA:3.40.190.10 219 257 1.2E-10 T 23-04-2016 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 Gene3D G3DSA:3.40.190.10 36 124 1.2E-10 T 23-04-2016 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 SMART SM00388 307 372 5.3E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10690 626aa37075df8dc3c95326afee865bb8 789 SUPERFAMILY SSF52172 559 685 4.27E-33 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 7.6E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 7.6E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 SMART SM00895 99 231 2.3E-20 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 SUPERFAMILY SSF46785 5 76 1.11E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 SMART SM00345 15 74 3.3E-25 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 SUPERFAMILY SSF48008 95 236 3.4E-24 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 PANTHER PTHR11751:SF355 93 115 3.8E-41 T 23-04-2016 LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 PANTHER PTHR11751:SF355 12 77 3.8E-41 T 23-04-2016 LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 8.3E-23 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 Gene3D G3DSA:1.20.120.530 95 239 4.3E-23 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 Pfam PF07729 FCD domain 99 229 3.4E-22 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 Gene3D G3DSA:1.10.10.10 7 76 4.6E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 PANTHER PTHR11751 93 115 3.8E-41 T 23-04-2016 LT40_RS13015 f1e96bcc450acd07cfd71419648983de 255 PANTHER PTHR11751 12 77 3.8E-41 T 23-04-2016 LT40_RS16230 2a7ad3450ef5aad4c5109a5eacfc95f1 161 Pfam PF03061 Thioesterase superfamily 23 96 1.2E-18 T 23-04-2016 IPR006683 Thioesterase domain LT40_RS16230 2a7ad3450ef5aad4c5109a5eacfc95f1 161 SUPERFAMILY SSF54637 3 155 2.07E-45 T 23-04-2016 IPR029069 HotDog domain LT40_RS16230 2a7ad3450ef5aad4c5109a5eacfc95f1 161 PANTHER PTHR11049 7 157 1.3E-69 T 23-04-2016 LT40_RS16230 2a7ad3450ef5aad4c5109a5eacfc95f1 161 Gene3D G3DSA:3.10.129.10 6 153 1.0E-55 T 23-04-2016 IPR029069 HotDog domain LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 Hamap MF_01973 Lon protease [lon]. 7 767 70.956 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 PANTHER PTHR10046 5 771 0.0 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 Gene3D G3DSA:3.30.230.10 585 766 1.7E-74 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 SMART SM00382 344 488 3.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 SMART SM00464 6 198 1.4E-71 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 SUPERFAMILY SSF54211 590 765 4.17E-57 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 TIGRFAM TIGR00763 lon: endopeptidase La 8 766 4.0E-299 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 668 687 3.3E-54 T 23-04-2016 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 721 739 3.3E-54 T 23-04-2016 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 371 3.3E-54 T 23-04-2016 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 698 717 3.3E-54 T 23-04-2016 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 590 606 3.3E-54 T 23-04-2016 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 348 484 1.9E-19 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 PIRSF PIRSF001174 1 770 0.0 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 564 767 3.6E-97 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 SUPERFAMILY SSF88697 6 197 1.17E-48 T 23-04-2016 IPR015947 PUA-like domain LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 Gene3D G3DSA:3.40.50.300 308 496 3.7E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 SUPERFAMILY SSF52540 308 581 1.49E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 PANTHER PTHR10046:SF43 5 771 0.0 T 23-04-2016 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 197 7.4E-41 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 LT40_RS02110 9f7ad64ef72df24de5fe99056215e42b 798 Gene3D G3DSA:1.10.8.60 497 579 1.4E-31 T 23-04-2016 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 PANTHER PTHR11693 1 286 1.7E-129 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 SUPERFAMILY SSF52943 2 286 5.49E-95 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 Gene3D G3DSA:3.40.1380.10 64 192 7.6E-44 T 23-04-2016 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 Gene3D G3DSA:1.10.287.80 19 60 1.3E-37 T 23-04-2016 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 Gene3D G3DSA:1.10.287.80 201 234 1.3E-37 T 23-04-2016 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 5.7E-106 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 23-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.563 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.7E-37 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 2.7E-37 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.7E-37 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 2.7E-37 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 Gene3D G3DSA:1.10.287.80 235 281 9.7E-31 T 23-04-2016 LT40_RS16120 db7d0f3e60fe37cf69a27d728cad9257 286 Pfam PF00231 ATP synthase 5 285 5.0E-92 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 Gene3D G3DSA:1.10.1020.10 60 118 3.1E-9 T 23-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 230 1.8E-21 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 SUPERFAMILY SSF53335 1 256 1.83E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 7.8E-13 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 170 182 7.8E-13 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 7.8E-13 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 7.8E-13 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 PANTHER PTHR30481 4 257 7.2E-77 T 23-04-2016 LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 PANTHER PTHR30481:SF4 4 257 7.2E-77 T 23-04-2016 LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 PIRSF PIRSF000398 1 259 3.3E-42 T 23-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 Gene3D G3DSA:3.40.50.150 2 59 1.7E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08825 dd7e3568734abb0f5e4865ab9ac184b9 264 Gene3D G3DSA:3.40.50.150 154 256 1.7E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14345 32f413c35c9cc3c0da26cd4f0fb9ba73 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 437 636 5.0E-53 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS14345 32f413c35c9cc3c0da26cd4f0fb9ba73 638 SMART SM01358 37 287 5.0E-44 T 23-04-2016 IPR032255 Helical bimodular sensor domain LT40_RS14345 32f413c35c9cc3c0da26cd4f0fb9ba73 638 PANTHER PTHR32089 231 638 2.5E-127 T 23-04-2016 LT40_RS14345 32f413c35c9cc3c0da26cd4f0fb9ba73 638 Pfam PF16591 Helical bimodular sensor domain 37 285 1.2E-58 T 23-04-2016 IPR032255 Helical bimodular sensor domain LT40_RS14345 32f413c35c9cc3c0da26cd4f0fb9ba73 638 SMART SM00304 368 414 8.6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS14345 32f413c35c9cc3c0da26cd4f0fb9ba73 638 SMART SM00304 309 361 1.8E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS14345 32f413c35c9cc3c0da26cd4f0fb9ba73 638 SMART SM00283 376 637 2.3E-86 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS14345 32f413c35c9cc3c0da26cd4f0fb9ba73 638 Pfam PF00672 HAMP domain 290 358 1.4E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS14345 32f413c35c9cc3c0da26cd4f0fb9ba73 638 SUPERFAMILY SSF58104 329 638 3.4E-79 T 23-04-2016 LT40_RS14345 32f413c35c9cc3c0da26cd4f0fb9ba73 638 Gene3D G3DSA:1.10.287.950 391 608 2.1E-60 T 23-04-2016 LT40_RS09615 4874b7b379a3578fa2c2c4e9faf278b3 433 SUPERFAMILY SSF103088 314 433 3.01E-16 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS09615 4874b7b379a3578fa2c2c4e9faf278b3 433 PANTHER PTHR30570:SF1 23 46 1.5E-56 T 23-04-2016 LT40_RS09615 4874b7b379a3578fa2c2c4e9faf278b3 433 Gene3D G3DSA:3.30.1330.60 324 433 9.1E-17 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS09615 4874b7b379a3578fa2c2c4e9faf278b3 433 PANTHER PTHR30570:SF1 70 299 1.5E-56 T 23-04-2016 LT40_RS09615 4874b7b379a3578fa2c2c4e9faf278b3 433 Pfam PF00691 OmpA family 334 428 6.1E-10 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS09615 4874b7b379a3578fa2c2c4e9faf278b3 433 PANTHER PTHR30570 70 299 1.5E-56 T 23-04-2016 LT40_RS09615 4874b7b379a3578fa2c2c4e9faf278b3 433 PANTHER PTHR30570 23 46 1.5E-56 T 23-04-2016 LT40_RS09615 4874b7b379a3578fa2c2c4e9faf278b3 433 Pfam PF12849 PBP superfamily domain 71 287 2.5E-32 T 23-04-2016 IPR024370 PBP domain LT40_RS09615 4874b7b379a3578fa2c2c4e9faf278b3 433 Gene3D G3DSA:3.40.190.10 131 262 4.4E-30 T 23-04-2016 LT40_RS09615 4874b7b379a3578fa2c2c4e9faf278b3 433 SUPERFAMILY SSF53850 23 44 4.76E-59 T 23-04-2016 LT40_RS09615 4874b7b379a3578fa2c2c4e9faf278b3 433 SUPERFAMILY SSF53850 74 345 4.76E-59 T 23-04-2016 LT40_RS05315 3ca353fa444cd596d7999ac219085987 361 PANTHER PTHR24220 8 249 4.5E-129 T 23-04-2016 LT40_RS05315 3ca353fa444cd596d7999ac219085987 361 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS05315 3ca353fa444cd596d7999ac219085987 361 PANTHER PTHR24220:SF282 8 249 4.5E-129 T 23-04-2016 LT40_RS05315 3ca353fa444cd596d7999ac219085987 361 SUPERFAMILY SSF50331 250 346 1.67E-11 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS05315 3ca353fa444cd596d7999ac219085987 361 SUPERFAMILY SSF52540 6 242 2.48E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05315 3ca353fa444cd596d7999ac219085987 361 Gene3D G3DSA:3.40.50.300 5 237 1.4E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05315 3ca353fa444cd596d7999ac219085987 361 Pfam PF08402 TOBE domain 276 345 4.1E-9 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LT40_RS05315 3ca353fa444cd596d7999ac219085987 361 SMART SM00382 31 214 2.2E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS05315 3ca353fa444cd596d7999ac219085987 361 Pfam PF00005 ABC transporter 23 164 3.2E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS15015 717fb65cd3352e00d48caefef1213088 118 Pfam PF07411 Domain of unknown function (DUF1508) 11 51 2.5E-11 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 LT40_RS15015 717fb65cd3352e00d48caefef1213088 118 Pfam PF07411 Domain of unknown function (DUF1508) 61 105 2.0E-7 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 LT40_RS15015 717fb65cd3352e00d48caefef1213088 118 PANTHER PTHR40606 2 108 2.7E-19 T 23-04-2016 LT40_RS15015 717fb65cd3352e00d48caefef1213088 118 SUPERFAMILY SSF160113 3 58 1.57E-13 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 LT40_RS15015 717fb65cd3352e00d48caefef1213088 118 Gene3D G3DSA:3.30.160.160 58 97 5.6E-4 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 LT40_RS15015 717fb65cd3352e00d48caefef1213088 118 Gene3D G3DSA:3.30.160.160 4 48 6.8E-13 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 LT40_RS15015 717fb65cd3352e00d48caefef1213088 118 PANTHER PTHR40606:SF1 2 108 2.7E-19 T 23-04-2016 LT40_RS15015 717fb65cd3352e00d48caefef1213088 118 SUPERFAMILY SSF160113 57 107 7.2E-6 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 PANTHER PTHR11493 34 422 6.8E-61 T 23-04-2016 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 Gene3D G3DSA:3.90.480.10 48 115 4.8E-25 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 Gene3D G3DSA:3.90.480.10 271 347 4.8E-25 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 SUPERFAMILY SSF55124 31 112 3.76E-13 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 Gene3D G3DSA:3.30.413.10 118 245 1.9E-13 T 23-04-2016 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 Gene3D G3DSA:3.30.413.10 355 443 3.3E-11 T 23-04-2016 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 34 416 5.6E-115 T 23-04-2016 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 SUPERFAMILY SSF55124 255 347 4.09E-15 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 52 98 1.5E-10 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 279 330 9.9E-12 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 118 244 2.2E-12 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 SUPERFAMILY SSF56014 118 245 1.57E-21 T 23-04-2016 LT40_RS13505 f063a1fd30b4a9dec48b549e609c3a37 457 SUPERFAMILY SSF56014 356 448 1.28E-13 T 23-04-2016 LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 Gene3D G3DSA:3.20.20.450 606 850 9.7E-100 T 23-04-2016 IPR001633 EAL domain LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 SUPERFAMILY SSF141868 608 851 7.19E-89 T 23-04-2016 IPR001633 EAL domain LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 Gene3D G3DSA:3.30.450.20 306 419 5.0E-13 T 23-04-2016 LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 SMART SM00052 603 845 1.6E-116 T 23-04-2016 IPR001633 EAL domain LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 SMART SM00091 314 379 9.5E-6 T 23-04-2016 IPR000014 PAS domain LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 Pfam PF05228 CHASE4 domain 67 227 2.1E-18 T 23-04-2016 IPR007892 CHASE4 LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 SMART SM00267 421 593 3.1E-62 T 23-04-2016 IPR000160 GGDEF domain LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 Pfam PF00563 EAL domain 609 840 1.1E-72 T 23-04-2016 IPR001633 EAL domain LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 PANTHER PTHR10799:SF657 465 703 1.5E-82 T 23-04-2016 LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 PANTHER PTHR10799:SF657 260 437 1.5E-82 T 23-04-2016 LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 311 426 5.0E-7 T 23-04-2016 IPR000014 PAS domain LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 PANTHER PTHR10799 465 703 1.5E-82 T 23-04-2016 LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 PANTHER PTHR10799 260 437 1.5E-82 T 23-04-2016 LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 Pfam PF00990 Diguanylate cyclase, GGDEF domain 433 588 1.5E-45 T 23-04-2016 IPR000160 GGDEF domain LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 429 590 4.6E-42 T 23-04-2016 IPR000160 GGDEF domain LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 SUPERFAMILY SSF55785 303 419 3.84E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 SUPERFAMILY SSF55073 437 595 1.26E-47 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS06365 7627490d8e68f2f65f5c1ffd38a10c92 855 Gene3D G3DSA:3.30.70.270 433 601 2.5E-55 T 23-04-2016 LT40_RS17975 8cbf3e607aeffb517c3768613cfd39aa 256 Gene3D G3DSA:3.30.65.10 216 254 4.2E-7 T 23-04-2016 LT40_RS17975 8cbf3e607aeffb517c3768613cfd39aa 256 SUPERFAMILY SSF57783 204 254 7.14E-7 T 23-04-2016 LT40_RS17975 8cbf3e607aeffb517c3768613cfd39aa 256 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 218 255 1.0E-9 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 LT40_RS17975 8cbf3e607aeffb517c3768613cfd39aa 256 Pfam PF08378 Nuclease-related domain 33 144 6.6E-25 T 23-04-2016 IPR011528 Nuclease-related domain, NERD LT40_RS11750 8a7ab20b9d462635b966e74c4fed1d95 311 PANTHER PTHR32322 4 308 8.4E-19 T 23-04-2016 LT40_RS11750 8a7ab20b9d462635b966e74c4fed1d95 311 SUPERFAMILY SSF103481 46 148 4.58E-5 T 23-04-2016 LT40_RS11750 8a7ab20b9d462635b966e74c4fed1d95 311 SUPERFAMILY SSF103481 192 297 8.63E-10 T 23-04-2016 LT40_RS11750 8a7ab20b9d462635b966e74c4fed1d95 311 Pfam PF00892 EamA-like transporter family 15 148 4.3E-14 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS11750 8a7ab20b9d462635b966e74c4fed1d95 311 Pfam PF00892 EamA-like transporter family 157 296 2.6E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS09165 f08d420e0c6802aaaf7b667ff59708ba 481 Pfam PF13946 Domain of unknown function (DUF4214) 295 361 1.0E-11 T 23-04-2016 IPR025282 Domain of unknown function DUF4214 LT40_RS09165 f08d420e0c6802aaaf7b667ff59708ba 481 Pfam PF13946 Domain of unknown function (DUF4214) 362 414 2.1E-11 T 23-04-2016 IPR025282 Domain of unknown function DUF4214 LT40_RS09165 f08d420e0c6802aaaf7b667ff59708ba 481 Pfam PF13946 Domain of unknown function (DUF4214) 264 304 7.1E-6 T 23-04-2016 IPR025282 Domain of unknown function DUF4214 LT40_RS09165 f08d420e0c6802aaaf7b667ff59708ba 481 Pfam PF13946 Domain of unknown function (DUF4214) 418 469 3.9E-6 T 23-04-2016 IPR025282 Domain of unknown function DUF4214 LT40_RS09165 f08d420e0c6802aaaf7b667ff59708ba 481 Gene3D G3DSA:2.150.10.10 128 253 1.2E-18 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS09165 f08d420e0c6802aaaf7b667ff59708ba 481 SUPERFAMILY SSF51120 124 243 2.88E-19 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS15950 fe270d87ed3145094138315a810a86e1 368 PANTHER PTHR32039 61 366 1.2E-107 T 23-04-2016 LT40_RS15950 fe270d87ed3145094138315a810a86e1 368 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 79 296 4.6E-78 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 LT40_RS15950 fe270d87ed3145094138315a810a86e1 368 SUPERFAMILY SSF102405 90 297 2.9E-46 T 23-04-2016 LT40_RS15950 fe270d87ed3145094138315a810a86e1 368 Gene3D G3DSA:3.40.50.450 121 300 2.7E-17 T 23-04-2016 LT40_RS15950 fe270d87ed3145094138315a810a86e1 368 PANTHER PTHR32039:SF8 61 366 1.2E-107 T 23-04-2016 LT40_RS15950 fe270d87ed3145094138315a810a86e1 368 Gene3D G3DSA:1.10.150.20 19 63 8.2E-4 T 23-04-2016 LT40_RS15950 fe270d87ed3145094138315a810a86e1 368 Pfam PF02481 DNA recombination-mediator protein A 82 288 2.5E-77 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 SUPERFAMILY SSF52156 617 743 3.01E-33 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 SUPERFAMILY SSF46955 3 51 7.32E-11 T 23-04-2016 IPR009061 Putative DNA-binding domain LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 339 495 3.3E-31 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 261 311 1.5E-15 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.7E-6 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 834 17.139 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 SUPERFAMILY SSF52540 331 504 1.4E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 Gene3D G3DSA:2.40.30.10 507 600 4.7E-27 T 23-04-2016 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 SUPERFAMILY SSF50447 509 591 3.12E-26 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 Gene3D G3DSA:3.40.50.300 337 495 4.9E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 SUPERFAMILY SSF50447 738 834 7.27E-31 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 ProSitePatterns PS01176 Initiation factor 2 signature. 787 809 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 Pfam PF00009 Elongation factor Tu GTP binding domain 341 497 8.1E-36 T 23-04-2016 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 Gene3D G3DSA:2.40.30.10 738 834 9.8E-36 T 23-04-2016 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 95 1.3E-9 T 23-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 Pfam PF11987 Translation-initiation factor 2 621 726 7.3E-34 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 PANTHER PTHR23115:SF184 689 834 7.9E-207 T 23-04-2016 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 PANTHER PTHR23115:SF184 321 664 7.9E-207 T 23-04-2016 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 PANTHER PTHR23115 689 834 7.9E-207 T 23-04-2016 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 PANTHER PTHR23115 321 664 7.9E-207 T 23-04-2016 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 Gene3D G3DSA:3.40.50.10050 636 715 1.5E-20 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 Gene3D G3DSA:3.30.56.50 2 51 2.4E-21 T 23-04-2016 LT40_RS12885 ac74b4d51de4d7b63828845ca7d16e3d 836 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 255 836 2.4E-257 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 LT40_RS16640 1336c21096cd145d93ebfca0328503fa 459 PIRSF PIRSF006603 7 458 1.3E-59 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LT40_RS16640 1336c21096cd145d93ebfca0328503fa 459 PANTHER PTHR11206 6 441 1.6E-88 T 23-04-2016 LT40_RS16640 1336c21096cd145d93ebfca0328503fa 459 PANTHER PTHR11206:SF95 6 441 1.6E-88 T 23-04-2016 LT40_RS16640 1336c21096cd145d93ebfca0328503fa 459 Pfam PF01554 MatE 18 175 3.3E-22 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LT40_RS16640 1336c21096cd145d93ebfca0328503fa 459 Pfam PF01554 MatE 244 409 1.1E-26 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LT40_RS16640 1336c21096cd145d93ebfca0328503fa 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 423 9.4E-64 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 PANTHER PTHR11063:SF6 9 372 4.2E-118 T 23-04-2016 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 Gene3D G3DSA:3.40.1160.10 3 265 2.8E-59 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 Pfam PF00696 Amino acid kinase family 10 238 3.9E-45 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 37.231 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 23-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 Gene3D G3DSA:2.30.130.10 278 369 3.8E-26 T 23-04-2016 IPR015947 PUA-like domain LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 SUPERFAMILY SSF88697 280 371 4.66E-23 T 23-04-2016 IPR015947 PUA-like domain LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 PANTHER PTHR11063 9 372 4.2E-118 T 23-04-2016 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 PIRSF PIRSF000729 4 372 2.1E-131 T 23-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 Pfam PF01472 PUA domain 281 355 3.9E-22 T 23-04-2016 IPR002478 PUA domain GO:0003723 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 SUPERFAMILY SSF53633 9 261 1.7E-69 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 SMART SM00359 281 364 1.7E-17 T 23-04-2016 IPR002478 PUA domain GO:0003723 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 370 2.3E-130 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 3.6E-53 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 3.6E-53 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 3.6E-53 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 3.6E-53 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LT40_RS19425 e30f26c81c7de2d836441ec6323c3d4e 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 3.6E-53 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 PANTHER PTHR32071 14 308 3.5E-107 T 23-04-2016 LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 289 309 8.1E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 272 289 8.1E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 Gene3D G3DSA:1.10.8.60 179 247 1.3E-19 T 23-04-2016 LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 Pfam PF00158 Sigma-54 interaction domain 16 172 2.2E-33 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 SUPERFAMILY SSF46689 219 308 1.87E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 Pfam PF02954 Bacterial regulatory protein, Fis family 269 303 6.4E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 Gene3D G3DSA:1.10.10.60 267 308 3.7E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 SMART SM00382 35 167 4.9E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 PANTHER PTHR32071:SF34 14 308 3.5E-107 T 23-04-2016 LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 Gene3D G3DSA:3.40.50.300 14 178 3.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 SUPERFAMILY SSF52540 15 247 3.16E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10210 31304eee1c4a6960b6544d8a557c38dd 309 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS16130 1224f83bd1f0b4e89cb78417b8e376c9 141 PANTHER PTHR13822 1 140 3.8E-40 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16130 1224f83bd1f0b4e89cb78417b8e376c9 141 SUPERFAMILY SSF51344 3 86 3.66E-24 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16130 1224f83bd1f0b4e89cb78417b8e376c9 141 Gene3D G3DSA:1.20.5.440 92 134 5.8E-16 T 23-04-2016 LT40_RS16130 1224f83bd1f0b4e89cb78417b8e376c9 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 3.2E-44 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16130 1224f83bd1f0b4e89cb78417b8e376c9 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 4.2E-30 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16130 1224f83bd1f0b4e89cb78417b8e376c9 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 132 2.3E-7 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain LT40_RS16130 1224f83bd1f0b4e89cb78417b8e376c9 141 Gene3D G3DSA:2.60.15.10 3 91 1.3E-28 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16130 1224f83bd1f0b4e89cb78417b8e376c9 141 SUPERFAMILY SSF46604 89 137 4.97E-11 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain LT40_RS16130 1224f83bd1f0b4e89cb78417b8e376c9 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 19.778 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS16130 1224f83bd1f0b4e89cb78417b8e376c9 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 86 2.0E-38 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 LT40_RS15795 82adea89b1c48aae92552566d96ebd7c 594 Pfam PF05199 GMC oxidoreductase 451 573 6.7E-20 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 LT40_RS15795 82adea89b1c48aae92552566d96ebd7c 594 PANTHER PTHR11552:SF139 5 589 2.2E-170 T 23-04-2016 LT40_RS15795 82adea89b1c48aae92552566d96ebd7c 594 SUPERFAMILY SSF51905 524 585 4.86E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15795 82adea89b1c48aae92552566d96ebd7c 594 SUPERFAMILY SSF51905 6 344 4.86E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15795 82adea89b1c48aae92552566d96ebd7c 594 Pfam PF00732 GMC oxidoreductase 203 348 2.6E-8 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 LT40_RS15795 82adea89b1c48aae92552566d96ebd7c 594 SUPERFAMILY SSF54373 433 496 5.49E-10 T 23-04-2016 LT40_RS15795 82adea89b1c48aae92552566d96ebd7c 594 PANTHER PTHR11552 5 589 2.2E-170 T 23-04-2016 LT40_RS15795 82adea89b1c48aae92552566d96ebd7c 594 Gene3D G3DSA:3.50.50.60 515 583 3.8E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15795 82adea89b1c48aae92552566d96ebd7c 594 Gene3D G3DSA:3.50.50.60 246 352 3.8E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15795 82adea89b1c48aae92552566d96ebd7c 594 Gene3D G3DSA:3.50.50.60 6 158 3.8E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15795 82adea89b1c48aae92552566d96ebd7c 594 Gene3D G3DSA:3.50.50.60 457 470 3.8E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 SUPERFAMILY SSF55174 320 396 7.77E-13 T 23-04-2016 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 Gene3D G3DSA:3.10.290.10 327 396 1.8E-15 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 396 1.1E-117 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 PANTHER PTHR11766 4 398 2.6E-220 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 312 9.2E-79 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 Gene3D G3DSA:3.40.50.620 10 227 1.4E-85 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 2.0E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 2.0E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.0E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 2.0E-25 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 Gene3D G3DSA:1.10.240.10 228 326 1.6E-34 T 23-04-2016 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 SUPERFAMILY SSF52374 4 311 2.81E-97 T 23-04-2016 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 PANTHER PTHR11766:SF1 4 398 2.6E-220 T 23-04-2016 LT40_RS18235 2e5e4b4a89e0197e69394772da0eb3cd 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 396 47.476 T 23-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 LT40_RS08255 e936294f93654b76751a4e5e917e6e3d 368 SUPERFAMILY SSF111369 51 263 6.41E-17 T 23-04-2016 LT40_RS08255 e936294f93654b76751a4e5e917e6e3d 368 PANTHER PTHR30469 8 366 3.8E-51 T 23-04-2016 LT40_RS08255 e936294f93654b76751a4e5e917e6e3d 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 45 355 4.3E-52 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LT40_RS08255 e936294f93654b76751a4e5e917e6e3d 368 Gene3D G3DSA:2.40.50.100 65 94 2.0E-15 T 23-04-2016 LT40_RS08255 e936294f93654b76751a4e5e917e6e3d 368 Gene3D G3DSA:2.40.50.100 169 200 2.0E-15 T 23-04-2016 LT40_RS08255 e936294f93654b76751a4e5e917e6e3d 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 261 1.6E-14 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LT40_RS08300 170885eb72916cce461abe962bd5e857 177 Pfam PF04542 Sigma-70 region 2 15 80 1.2E-8 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS08300 170885eb72916cce461abe962bd5e857 177 Gene3D G3DSA:1.10.1740.10 9 80 7.0E-9 T 23-04-2016 LT40_RS08300 170885eb72916cce461abe962bd5e857 177 Pfam PF08281 Sigma-70, region 4 114 163 6.4E-11 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS08300 170885eb72916cce461abe962bd5e857 177 SUPERFAMILY SSF88659 104 164 4.14E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS08300 170885eb72916cce461abe962bd5e857 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 164 5.2E-15 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS08300 170885eb72916cce461abe962bd5e857 177 Gene3D G3DSA:1.10.10.10 109 164 6.0E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08300 170885eb72916cce461abe962bd5e857 177 SUPERFAMILY SSF88946 10 95 2.0E-9 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS08300 170885eb72916cce461abe962bd5e857 177 PANTHER PTHR30173 9 174 7.1E-25 T 23-04-2016 LT40_RS08300 170885eb72916cce461abe962bd5e857 177 PANTHER PTHR30173:SF9 9 174 7.1E-25 T 23-04-2016 LT40_RS07045 8622f30f688f1ab0692d7d523071f2d1 464 PANTHER PTHR39479 1 454 6.4E-231 T 23-04-2016 LT40_RS07045 8622f30f688f1ab0692d7d523071f2d1 464 PANTHER PTHR39479:SF2 1 454 6.4E-231 T 23-04-2016 LT40_RS07045 8622f30f688f1ab0692d7d523071f2d1 464 Pfam PF07063 Domain of unknown function (DUF1338) 11 414 1.0E-113 T 23-04-2016 IPR009770 Domain of unknown function DUF1338 LT40_RS07045 8622f30f688f1ab0692d7d523071f2d1 464 SMART SM01150 13 414 1.1E-203 T 23-04-2016 IPR009770 Domain of unknown function DUF1338 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 PANTHER PTHR23309 8 715 0.0 T 23-04-2016 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 SUPERFAMILY SSF48179 496 607 1.53E-30 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 107 127 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 SUPERFAMILY SSF48179 622 714 1.02E-23 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 Gene3D G3DSA:3.40.50.720 312 498 3.7E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 23-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 206 1.2E-39 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 Gene3D G3DSA:1.10.1040.10 633 713 1.5E-15 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 SUPERFAMILY SSF52096 2 305 1.61E-66 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 PANTHER PTHR23309:SF18 8 715 0.0 T 23-04-2016 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 52.209 T 23-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 1.1E-61 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 Gene3D G3DSA:3.90.226.10 6 208 8.5E-58 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 592 7.7E-28 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 23-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 Gene3D G3DSA:1.10.1040.10 499 593 1.6E-23 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS07275 d4d5b791f3c324d74523771d9d236dba 725 SUPERFAMILY SSF51735 313 496 8.74E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 Hamap MF_00163 Peptide deformylase [def]. 2 163 32.57 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 PIRSF PIRSF004749 1 168 3.0E-60 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 PANTHER PTHR10458:SF10 1 168 1.1E-103 T 23-04-2016 LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 4.5E-57 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 Pfam PF01327 Polypeptide deformylase 4 153 1.7E-53 T 23-04-2016 IPR023635 Peptide deformylase LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 PRINTS PR01576 Peptide deformylase signature 33 62 5.7E-40 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 PRINTS PR01576 Peptide deformylase signature 121 150 5.7E-40 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 PRINTS PR01576 Peptide deformylase signature 102 120 5.7E-40 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 PRINTS PR01576 Peptide deformylase signature 90 101 5.7E-40 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 Gene3D G3DSA:3.90.45.10 5 166 1.3E-68 T 23-04-2016 IPR023635 Peptide deformylase LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 SUPERFAMILY SSF56420 2 165 1.31E-65 T 23-04-2016 IPR023635 Peptide deformylase LT40_RS15960 315e2e656ef1486e7ca41b8a47896936 168 PANTHER PTHR10458 1 168 1.1E-103 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 SUPERFAMILY SSF117916 98 187 6.1E-25 T 23-04-2016 LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 Pfam PF01106 NifU-like domain 114 180 1.4E-20 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 SUPERFAMILY SSF89360 3 100 1.65E-19 T 23-04-2016 IPR000361 FeS cluster biogenesis LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 3 194 41.753 T 23-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 121 180 2.0E-20 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 100 2.8E-9 T 23-04-2016 IPR000361 FeS cluster biogenesis LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 4 194 4.0E-92 T 23-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 Gene3D G3DSA:2.60.300.12 2 97 7.1E-15 T 23-04-2016 IPR000361 FeS cluster biogenesis LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 PANTHER PTHR10072 150 191 2.5E-78 T 23-04-2016 LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 PANTHER PTHR10072 1 100 2.5E-78 T 23-04-2016 LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 PANTHER PTHR10072:SF37 150 191 2.5E-78 T 23-04-2016 LT40_RS10275 f7ec0f5a272e01bfee89128ed2ac4f9a 194 PANTHER PTHR10072:SF37 1 100 2.5E-78 T 23-04-2016 LT40_RS17595 af5f2157eaac8c7283e5a7dd4a2a785a 256 PANTHER PTHR13696 4 254 1.6E-105 T 23-04-2016 LT40_RS17595 af5f2157eaac8c7283e5a7dd4a2a785a 256 Gene3D G3DSA:3.40.50.300 4 253 3.9E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17595 af5f2157eaac8c7283e5a7dd4a2a785a 256 SUPERFAMILY SSF52540 1 254 7.84E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17595 af5f2157eaac8c7283e5a7dd4a2a785a 256 PANTHER PTHR13696:SF66 4 254 1.6E-105 T 23-04-2016 LT40_RS17595 af5f2157eaac8c7283e5a7dd4a2a785a 256 Pfam PF13614 AAA domain 5 182 6.0E-37 T 23-04-2016 IPR025669 AAA domain LT40_RS19205 8423e3c0b6f1eac0e88b447c4980754b 258 SUPERFAMILY SSF46785 6 76 4.12E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS19205 8423e3c0b6f1eac0e88b447c4980754b 258 SMART SM00346 6 92 1.6E-16 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS19205 8423e3c0b6f1eac0e88b447c4980754b 258 Gene3D G3DSA:1.10.10.10 6 74 2.1E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS19205 8423e3c0b6f1eac0e88b447c4980754b 258 Pfam PF01614 Bacterial transcriptional regulator 122 249 7.3E-19 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal LT40_RS19205 8423e3c0b6f1eac0e88b447c4980754b 258 SUPERFAMILY SSF55781 81 249 4.12E-33 T 23-04-2016 IPR029016 GAF domain-like LT40_RS19205 8423e3c0b6f1eac0e88b447c4980754b 258 PANTHER PTHR30136 6 248 1.4E-79 T 23-04-2016 LT40_RS19205 8423e3c0b6f1eac0e88b447c4980754b 258 Pfam PF09339 IclR helix-turn-helix domain 6 55 1.7E-15 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS19205 8423e3c0b6f1eac0e88b447c4980754b 258 Gene3D G3DSA:3.30.450.40 81 249 3.4E-42 T 23-04-2016 IPR029016 GAF domain-like LT40_RS19205 8423e3c0b6f1eac0e88b447c4980754b 258 PANTHER PTHR30136:SF13 6 248 1.4E-79 T 23-04-2016 LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 Gene3D G3DSA:1.10.1670.10 250 298 1.8E-13 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 SUPERFAMILY SSF48150 115 300 1.29E-34 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 SUPERFAMILY SSF55945 8 105 4.08E-22 T 23-04-2016 LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 PANTHER PTHR10242:SF3 8 51 1.2E-68 T 23-04-2016 LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 PANTHER PTHR10242:SF3 71 303 1.2E-68 T 23-04-2016 LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 PANTHER PTHR10242 8 51 1.2E-68 T 23-04-2016 LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 PANTHER PTHR10242 71 303 1.2E-68 T 23-04-2016 LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 Pfam PF06029 AlkA N-terminal domain 8 124 1.5E-29 T 23-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 Gene3D G3DSA:1.10.340.30 126 248 4.9E-32 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 130 259 1.6E-6 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 SMART SM00478 134 299 1.8E-6 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 Gene3D G3DSA:3.30.310.20 8 124 2.6E-29 T 23-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal LT40_RS06530 cc574da47924e7d907e3c3c0471ae81d 308 SMART SM01009 7 124 1.3E-37 T 23-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal LT40_RS04995 1abd85908467ccbcba637dd7de507d9e 215 PANTHER PTHR11228 1 209 4.8E-66 T 23-04-2016 LT40_RS04995 1abd85908467ccbcba637dd7de507d9e 215 PANTHER PTHR11228:SF6 1 209 4.8E-66 T 23-04-2016 LT40_RS04995 1abd85908467ccbcba637dd7de507d9e 215 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 212 34.545 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 LT40_RS04995 1abd85908467ccbcba637dd7de507d9e 215 PIRSF PIRSF000370 3 215 2.9E-67 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 LT40_RS04995 1abd85908467ccbcba637dd7de507d9e 215 Pfam PF04055 Radical SAM superfamily 28 119 2.1E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS04995 1abd85908467ccbcba637dd7de507d9e 215 Pfam PF13394 4Fe-4S single cluster domain 26 109 5.8E-12 T 23-04-2016 LT40_RS04995 1abd85908467ccbcba637dd7de507d9e 215 Gene3D G3DSA:3.20.20.70 31 104 1.2E-12 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS04995 1abd85908467ccbcba637dd7de507d9e 215 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 5 215 1.3E-109 T 23-04-2016 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE LT40_RS04995 1abd85908467ccbcba637dd7de507d9e 215 SUPERFAMILY SSF102114 27 105 1.83E-13 T 23-04-2016 LT40_RS01390 298ab847154652901481271180326c6b 321 Pfam PF00892 EamA-like transporter family 175 308 9.5E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS01390 298ab847154652901481271180326c6b 321 Pfam PF00892 EamA-like transporter family 19 161 1.8E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS01390 298ab847154652901481271180326c6b 321 SUPERFAMILY SSF103481 60 163 1.7E-13 T 23-04-2016 LT40_RS01390 298ab847154652901481271180326c6b 321 PANTHER PTHR32322 7 315 1.1E-61 T 23-04-2016 LT40_RS01390 298ab847154652901481271180326c6b 321 PANTHER PTHR32322:SF9 7 315 1.1E-61 T 23-04-2016 LT40_RS01390 298ab847154652901481271180326c6b 321 SUPERFAMILY SSF103481 208 311 3.92E-11 T 23-04-2016 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 Gene3D G3DSA:3.30.360.10 147 296 9.8E-58 T 23-04-2016 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 SUPERFAMILY SSF55021 351 422 2.41E-15 T 23-04-2016 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 PANTHER PTHR21499 4 367 4.5E-134 T 23-04-2016 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 PANTHER PTHR21499:SF2 4 367 4.5E-134 T 23-04-2016 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 Pfam PF00742 Homoserine dehydrogenase 135 313 2.0E-65 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 SUPERFAMILY SSF51735 2 156 2.92E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 127 2.9E-22 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 SUPERFAMILY SSF55347 135 300 1.11E-53 T 23-04-2016 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 PIRSF PIRSF000098 1 433 2.6E-166 T 23-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 Gene3D G3DSA:3.30.70.260 352 422 1.3E-14 T 23-04-2016 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 Pfam PF01842 ACT domain 352 418 4.7E-16 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LT40_RS20375 929f99562122505fb5f873fa46dee36d 434 Gene3D G3DSA:3.40.50.720 2 146 4.3E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 SUPERFAMILY SSF53335 265 384 1.1E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 SUPERFAMILY SSF53335 144 224 1.1E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 PANTHER PTHR18895:SF62 460 728 2.3E-109 T 23-04-2016 LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 313 319 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 Gene3D G3DSA:3.40.50.150 491 756 5.7E-73 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 7 758 32.663 T 23-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 Pfam PF01170 Putative RNA methylase family UPF0020 165 380 1.5E-43 T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 PANTHER PTHR18895 460 728 2.3E-109 T 23-04-2016 LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 SMART SM00981 59 157 2.9E-22 T 23-04-2016 IPR004114 THUMP domain GO:0003723 LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 PIRSF PIRSF037618 2 758 0.0 T 23-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 Gene3D G3DSA:3.40.50.150 151 221 1.1E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 Gene3D G3DSA:3.40.50.150 262 356 1.1E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 SUPERFAMILY SSF53335 454 753 1.03E-65 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 Pfam PF02926 THUMP domain 42 156 1.3E-6 T 23-04-2016 IPR004114 THUMP domain GO:0003723 LT40_RS01945 272db5452c88a10f27ab0c168904b148 758 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 537 711 3.0E-19 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 Pfam PF02881 SRP54-type protein, helical bundle domain 196 262 3.1E-12 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 SUPERFAMILY SSF47364 180 259 1.96E-20 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 455 468 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 PANTHER PTHR11564 175 487 6.5E-145 T 23-04-2016 LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 209 482 62.519 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 Gene3D G3DSA:1.20.120.140 172 262 1.3E-31 T 23-04-2016 LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 Gene3D G3DSA:3.40.50.300 277 481 6.5E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 Pfam PF00448 SRP54-type protein, GTPase domain 281 481 9.9E-78 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 SMART SM00962 281 482 3.7E-122 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 PANTHER PTHR11564:SF16 175 487 6.5E-145 T 23-04-2016 LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 SMART SM00963 185 266 8.7E-25 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 SMART SM00382 280 480 1.2E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 SUPERFAMILY SSF52540 278 481 6.2E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14680 c579a4c16edd734b43b089dc5a1cdff7 487 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 211 481 2.1E-110 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 LT40_RS17085 c1e66f0411fa39f505c9ac7bb6360bf5 221 PANTHER PTHR11820 19 221 7.6E-74 T 23-04-2016 LT40_RS17085 c1e66f0411fa39f505c9ac7bb6360bf5 221 Gene3D G3DSA:3.90.850.10 15 220 1.4E-66 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS17085 c1e66f0411fa39f505c9ac7bb6360bf5 221 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 19 220 5.4E-49 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS17085 c1e66f0411fa39f505c9ac7bb6360bf5 221 SUPERFAMILY SSF56529 13 220 4.06E-64 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS17085 c1e66f0411fa39f505c9ac7bb6360bf5 221 PANTHER PTHR11820:SF7 19 221 7.6E-74 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 Gene3D G3DSA:2.20.28.10 1 54 2.8E-25 T 23-04-2016 IPR004039 Rubredoxin-type fold LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PANTHER PTHR22912 78 428 1.7E-92 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 Gene3D G3DSA:3.50.50.60 201 368 1.2E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 94 374 1.1E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 189 207 3.4E-24 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 251 3.4E-24 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 343 365 3.4E-24 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 318 334 3.4E-24 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 94 113 3.4E-24 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 358 365 6.2E-14 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 93 115 6.2E-14 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 258 6.2E-14 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 319 333 6.2E-14 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PANTHER PTHR22912:SF130 78 428 1.7E-92 T 23-04-2016 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PRINTS PR00163 Rubredoxin signature 33 49 8.3E-8 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 PRINTS PR00163 Rubredoxin signature 3 19 8.3E-8 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 Pfam PF00301 Rubredoxin 3 49 2.1E-22 T 23-04-2016 IPR024935 Rubredoxin domain GO:0005506 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 Gene3D G3DSA:3.50.50.60 93 200 2.6E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 SUPERFAMILY SSF51905 82 371 4.0E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07030 9b6142e1693ed18b744807c67f60e3ed 472 SUPERFAMILY SSF57802 1 54 3.2E-22 T 23-04-2016 LT40_RS15175 55b9f2027d3c7598db1d5d94e657839b 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 258 5.5E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15175 55b9f2027d3c7598db1d5d94e657839b 265 Gene3D G3DSA:1.10.3720.10 16 261 1.3E-52 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15175 55b9f2027d3c7598db1d5d94e657839b 265 PANTHER PTHR30193:SF20 11 261 2.2E-69 T 23-04-2016 LT40_RS15175 55b9f2027d3c7598db1d5d94e657839b 265 PANTHER PTHR30193 11 261 2.2E-69 T 23-04-2016 LT40_RS15175 55b9f2027d3c7598db1d5d94e657839b 265 SUPERFAMILY SSF161098 11 261 3.46E-54 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10080 577e148e92b691c4ad198da4e32f37a2 217 SUPERFAMILY SSF53448 2 201 1.22E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS10080 577e148e92b691c4ad198da4e32f37a2 217 Pfam PF00535 Glycosyl transferase family 2 4 128 4.6E-14 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS10080 577e148e92b691c4ad198da4e32f37a2 217 Gene3D G3DSA:3.90.550.10 2 191 7.3E-15 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS10080 577e148e92b691c4ad198da4e32f37a2 217 PANTHER PTHR22916 1 186 5.1E-13 T 23-04-2016 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 SUPERFAMILY SSF54373 270 360 3.14E-18 T 23-04-2016 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 49.282 T 23-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 PANTHER PTHR13847 1 63 5.5E-239 T 23-04-2016 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 PANTHER PTHR13847 107 416 5.5E-239 T 23-04-2016 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 Pfam PF01266 FAD dependent oxidoreductase 3 398 8.9E-68 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 Gene3D G3DSA:3.40.50.720 1 96 4.5E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 Gene3D G3DSA:3.40.50.720 354 416 4.5E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 Gene3D G3DSA:3.40.50.720 194 268 4.5E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 SUPERFAMILY SSF51905 1 54 9.71E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 SUPERFAMILY SSF51905 360 419 9.71E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 SUPERFAMILY SSF51905 107 270 9.71E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 PANTHER PTHR13847:SF148 1 63 5.5E-239 T 23-04-2016 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 PANTHER PTHR13847:SF148 107 416 5.5E-239 T 23-04-2016 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 Gene3D G3DSA:3.30.9.10 269 353 4.1E-13 T 23-04-2016 LT40_RS16600 59300e3cc9aea9ee1a0695cb1a0ebf12 433 Gene3D G3DSA:3.30.9.10 136 193 4.1E-13 T 23-04-2016 LT40_RS09630 a1fa71a16c223f76d6f389e47ec72e51 567 PANTHER PTHR30193:SF8 1 277 1.2E-62 T 23-04-2016 LT40_RS09630 a1fa71a16c223f76d6f389e47ec72e51 567 Gene3D G3DSA:1.10.3720.10 310 564 1.5E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09630 a1fa71a16c223f76d6f389e47ec72e51 567 Gene3D G3DSA:1.10.3720.10 8 264 4.1E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09630 a1fa71a16c223f76d6f389e47ec72e51 567 SUPERFAMILY SSF161098 3 265 1.13E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09630 a1fa71a16c223f76d6f389e47ec72e51 567 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 383 559 4.5E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09630 a1fa71a16c223f76d6f389e47ec72e51 567 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 266 5.6E-6 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09630 a1fa71a16c223f76d6f389e47ec72e51 567 SUPERFAMILY SSF161098 309 560 3.27E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09630 a1fa71a16c223f76d6f389e47ec72e51 567 PANTHER PTHR30193 1 277 1.2E-62 T 23-04-2016 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 PANTHER PTHR22648 1 450 1.2E-173 T 23-04-2016 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 SUPERFAMILY SSF69705 1 128 1.44E-37 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 Gene3D G3DSA:3.30.300.20 280 348 3.5E-27 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 SUPERFAMILY SSF54814 202 280 1.7E-28 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 SUPERFAMILY SSF54814 281 345 7.19E-15 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 Gene3D G3DSA:1.10.150.20 359 422 3.5E-21 T 23-04-2016 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 Gene3D G3DSA:1.10.150.20 431 492 6.1E-22 T 23-04-2016 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 Gene3D G3DSA:2.40.50.140 131 200 2.3E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 Gene3D G3DSA:3.30.1480.10 1 126 8.2E-42 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 Pfam PF00575 S1 RNA binding domain 136 197 1.4E-6 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 28.825 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 Pfam PF08529 NusA N-terminal domain 4 125 5.6E-35 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 Pfam PF14520 Helix-hairpin-helix domain 434 488 7.5E-9 T 23-04-2016 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 SUPERFAMILY SSF47794 432 492 1.24E-15 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 SUPERFAMILY SSF47794 357 418 3.14E-16 T 23-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 Pfam PF13184 NusA-like KH domain 232 299 1.9E-26 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 344 1.3E-119 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 SMART SM00316 135 202 1.3E-10 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 415 2.4E-20 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 442 491 2.8E-19 T 23-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 PANTHER PTHR22648:SF0 1 450 1.2E-173 T 23-04-2016 LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 Gene3D G3DSA:3.30.300.20 201 279 3.4E-33 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta LT40_RS12890 4e76bc5d8a9085effa6595bba723fc8b 493 SUPERFAMILY SSF50249 134 201 3.51E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS05800 3eef3872b29ab7a3a3724c8e6d5459a0 286 PANTHER PTHR30007 1 265 9.6E-79 T 23-04-2016 LT40_RS05800 3eef3872b29ab7a3a3724c8e6d5459a0 286 SMART SM00481 3 68 1.8E-16 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LT40_RS05800 3eef3872b29ab7a3a3724c8e6d5459a0 286 Gene3D G3DSA:3.20.20.140 160 263 2.2E-37 T 23-04-2016 LT40_RS05800 3eef3872b29ab7a3a3724c8e6d5459a0 286 Gene3D G3DSA:3.20.20.140 1 86 2.2E-37 T 23-04-2016 LT40_RS05800 3eef3872b29ab7a3a3724c8e6d5459a0 286 Pfam PF02811 PHP domain 4 70 2.6E-7 T 23-04-2016 IPR004013 PHP domain GO:0003824 LT40_RS05800 3eef3872b29ab7a3a3724c8e6d5459a0 286 PANTHER PTHR30007:SF4 1 265 9.6E-79 T 23-04-2016 LT40_RS05800 3eef3872b29ab7a3a3724c8e6d5459a0 286 SUPERFAMILY SSF89550 1 81 3.53E-47 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LT40_RS05800 3eef3872b29ab7a3a3724c8e6d5459a0 286 SUPERFAMILY SSF89550 168 274 3.53E-47 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LT40_RS16615 2ca6a6f9f6ba5f9e6a7de571e5885236 164 SUPERFAMILY SSF55729 1 149 7.32E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS16615 2ca6a6f9f6ba5f9e6a7de571e5885236 164 Gene3D G3DSA:3.40.630.30 1 147 2.3E-13 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS16615 2ca6a6f9f6ba5f9e6a7de571e5885236 164 Pfam PF00583 Acetyltransferase (GNAT) family 91 143 6.8E-5 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 PANTHER PTHR23155 17 242 3.3E-61 T 23-04-2016 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 PANTHER PTHR23155:SF644 17 242 3.3E-61 T 23-04-2016 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 Gene3D G3DSA:1.10.510.10 312 362 7.7E-8 T 23-04-2016 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SUPERFAMILY SSF52058 9 187 4.0E-37 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 Gene3D G3DSA:3.30.200.20 201 281 7.1E-9 T 23-04-2016 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SMART SM00364 35 54 17.0 T 23-04-2016 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SMART SM00364 149 168 190.0 T 23-04-2016 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SMART SM00364 58 77 63.0 T 23-04-2016 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SMART SM00364 126 145 230.0 T 23-04-2016 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SMART SM00364 103 122 9.3 T 23-04-2016 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SUPERFAMILY SSF56112 205 426 7.11E-24 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 Pfam PF00069 Protein kinase domain 209 366 2.5E-8 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SMART SM00369 128 148 270.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SMART SM00369 104 126 12.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SMART SM00369 149 172 0.79 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SMART SM00369 58 81 12.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 SMART SM00369 37 57 35.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 212 234 - T 23-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 Gene3D G3DSA:3.80.10.10 11 187 3.3E-37 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 Pfam PF13855 Leucine rich repeat 129 183 3.1E-7 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 LT40_RS02205 ca3c7fc74d4f1304c2a864a289ba0dd7 428 Pfam PF13855 Leucine rich repeat 18 70 7.8E-7 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 LT40_RS05560 01ab2f8db5626c57e5abb38fb916491d 264 Gene3D G3DSA:3.10.310.10 129 248 1.3E-44 T 23-04-2016 LT40_RS05560 01ab2f8db5626c57e5abb38fb916491d 264 PIRSF PIRSF016184 1 260 4.7E-54 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LT40_RS05560 01ab2f8db5626c57e5abb38fb916491d 264 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 229 1.1E-36 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LT40_RS05560 01ab2f8db5626c57e5abb38fb916491d 264 PANTHER PTHR13774 1 260 1.3E-98 T 23-04-2016 LT40_RS05560 01ab2f8db5626c57e5abb38fb916491d 264 Gene3D G3DSA:3.10.310.10 1 122 1.4E-42 T 23-04-2016 LT40_RS05560 01ab2f8db5626c57e5abb38fb916491d 264 PANTHER PTHR13774:SF17 1 260 1.3E-98 T 23-04-2016 LT40_RS05560 01ab2f8db5626c57e5abb38fb916491d 264 Pfam PF02567 Phenazine biosynthesis-like protein 8 256 1.2E-56 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LT40_RS05560 01ab2f8db5626c57e5abb38fb916491d 264 SUPERFAMILY SSF54506 1 260 3.28E-81 T 23-04-2016 LT40_RS03575 f339130c798569b5330684c39746d7a0 269 SUPERFAMILY SSF56317 15 259 5.62E-65 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS03575 f339130c798569b5330684c39746d7a0 269 PANTHER PTHR23088:SF28 1 269 8.9E-132 T 23-04-2016 LT40_RS03575 f339130c798569b5330684c39746d7a0 269 Pfam PF00795 Carbon-nitrogen hydrolase 17 254 6.4E-31 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS03575 f339130c798569b5330684c39746d7a0 269 PANTHER PTHR23088 1 269 8.9E-132 T 23-04-2016 LT40_RS03575 f339130c798569b5330684c39746d7a0 269 Gene3D G3DSA:3.60.110.10 8 262 1.5E-66 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 PANTHER PTHR11751 15 77 4.4E-22 T 23-04-2016 LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 PANTHER PTHR11751 97 120 4.4E-22 T 23-04-2016 LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 Pfam PF07729 FCD domain 106 219 1.9E-21 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 Gene3D G3DSA:1.20.120.530 106 233 2.5E-23 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 SUPERFAMILY SSF46785 6 79 7.97E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 SMART SM00895 104 225 1.6E-15 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 Gene3D G3DSA:1.10.10.10 13 87 1.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.1E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.1E-6 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 SUPERFAMILY SSF48008 106 230 1.6E-23 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 SMART SM00345 16 75 1.8E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS05880 7e458ab4670d45554bbf6149b0ea5ee3 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 2.1E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS16985 530934f6f99985e7fc579d242e379167 446 Gene3D G3DSA:2.40.160.10 33 445 9.4E-133 T 23-04-2016 IPR023614 Porin domain LT40_RS16985 530934f6f99985e7fc579d242e379167 446 Pfam PF03573 outer membrane porin, OprD family 27 444 6.9E-125 T 23-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 LT40_RS16985 530934f6f99985e7fc579d242e379167 446 PANTHER PTHR34596 279 446 2.6E-111 T 23-04-2016 LT40_RS16985 530934f6f99985e7fc579d242e379167 446 PANTHER PTHR34596 1 263 2.6E-111 T 23-04-2016 LT40_RS09750 0a2cc6f2d7a27564a679ca8020203572 135 PANTHER PTHR39332 1 135 1.1E-20 T 23-04-2016 LT40_RS09750 0a2cc6f2d7a27564a679ca8020203572 135 PANTHER PTHR39332:SF2 1 135 1.1E-20 T 23-04-2016 LT40_RS09750 0a2cc6f2d7a27564a679ca8020203572 135 Gene3D G3DSA:3.30.530.20 1 134 2.1E-44 T 23-04-2016 IPR023393 START-like domain LT40_RS09750 0a2cc6f2d7a27564a679ca8020203572 135 SUPERFAMILY SSF55961 1 133 5.69E-36 T 23-04-2016 LT40_RS09750 0a2cc6f2d7a27564a679ca8020203572 135 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 133 1.8E-26 T 23-04-2016 IPR019587 Polyketide cyclase/dehydrase LT40_RS03690 01395b7ba2ddb2432c96e9253a48f5bb 483 SUPERFAMILY SSF75304 2 480 2.75E-173 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS03690 01395b7ba2ddb2432c96e9253a48f5bb 483 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 474 9.8E-179 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS03690 01395b7ba2ddb2432c96e9253a48f5bb 483 Gene3D G3DSA:3.90.1300.10 2 480 3.7E-190 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS03690 01395b7ba2ddb2432c96e9253a48f5bb 483 PANTHER PTHR11895:SF7 1 480 1.9E-228 T 23-04-2016 LT40_RS03690 01395b7ba2ddb2432c96e9253a48f5bb 483 Pfam PF01425 Amidase 22 463 4.4E-164 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS03690 01395b7ba2ddb2432c96e9253a48f5bb 483 PANTHER PTHR11895 1 480 1.9E-228 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS03690 01395b7ba2ddb2432c96e9253a48f5bb 483 ProSitePatterns PS00571 Amidases signature. 149 180 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS03690 01395b7ba2ddb2432c96e9253a48f5bb 483 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 474 93.61 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS01450 3248aa691f4f5c4e43cd8c33436c7f81 305 SUPERFAMILY SSF46785 1 84 2.24E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01450 3248aa691f4f5c4e43cd8c33436c7f81 305 Gene3D G3DSA:1.10.10.10 1 79 9.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01450 3248aa691f4f5c4e43cd8c33436c7f81 305 Pfam PF03466 LysR substrate binding domain 90 292 5.2E-27 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS01450 3248aa691f4f5c4e43cd8c33436c7f81 305 Gene3D G3DSA:3.40.190.10 80 204 6.5E-14 T 23-04-2016 LT40_RS01450 3248aa691f4f5c4e43cd8c33436c7f81 305 PANTHER PTHR30126:SF2 1 300 3.0E-52 T 23-04-2016 LT40_RS01450 3248aa691f4f5c4e43cd8c33436c7f81 305 Gene3D G3DSA:3.40.190.10 205 264 6.0E-6 T 23-04-2016 LT40_RS01450 3248aa691f4f5c4e43cd8c33436c7f81 305 PANTHER PTHR30126 1 300 3.0E-52 T 23-04-2016 LT40_RS01450 3248aa691f4f5c4e43cd8c33436c7f81 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 9.2E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01450 3248aa691f4f5c4e43cd8c33436c7f81 305 SUPERFAMILY SSF53850 91 300 5.02E-24 T 23-04-2016 LT40_RS03995 bb4a09a20636ef136516a35f7867a432 123 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 4 122 3.6E-34 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 LT40_RS03995 bb4a09a20636ef136516a35f7867a432 123 Pfam PF02021 Uncharacterised protein family UPF0102 13 103 5.0E-25 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 LT40_RS03995 bb4a09a20636ef136516a35f7867a432 123 PANTHER PTHR34039:SF1 2 122 1.1E-38 T 23-04-2016 LT40_RS03995 bb4a09a20636ef136516a35f7867a432 123 PANTHER PTHR34039 2 122 1.1E-38 T 23-04-2016 LT40_RS03995 bb4a09a20636ef136516a35f7867a432 123 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 117 22.492 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 LT40_RS03995 bb4a09a20636ef136516a35f7867a432 123 SUPERFAMILY SSF52980 8 112 3.08E-20 T 23-04-2016 IPR011335 Restriction endonuclease type II-like LT40_RS03995 bb4a09a20636ef136516a35f7867a432 123 Gene3D G3DSA:3.40.1350.10 13 122 1.0E-35 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 LT40_RS07225 0ba8daa96c613b6633c664050a1fca96 179 Gene3D G3DSA:3.40.980.10 9 170 1.5E-46 T 23-04-2016 IPR001453 MoaB/Mog domain LT40_RS07225 0ba8daa96c613b6633c664050a1fca96 179 PIRSF PIRSF006443 1 167 3.7E-63 T 23-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 LT40_RS07225 0ba8daa96c613b6633c664050a1fca96 179 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 152 8.5E-32 T 23-04-2016 IPR001453 MoaB/Mog domain LT40_RS07225 0ba8daa96c613b6633c664050a1fca96 179 PANTHER PTHR10192 5 174 1.2E-91 T 23-04-2016 LT40_RS07225 0ba8daa96c613b6633c664050a1fca96 179 SMART SM00852 15 159 1.6E-29 T 23-04-2016 IPR001453 MoaB/Mog domain LT40_RS07225 0ba8daa96c613b6633c664050a1fca96 179 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 73 86 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 LT40_RS07225 0ba8daa96c613b6633c664050a1fca96 179 SUPERFAMILY SSF53218 9 169 1.7E-46 T 23-04-2016 IPR001453 MoaB/Mog domain LT40_RS07225 0ba8daa96c613b6633c664050a1fca96 179 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 170 2.9E-84 T 23-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 LT40_RS07225 0ba8daa96c613b6633c664050a1fca96 179 PANTHER PTHR10192:SF18 5 174 1.2E-91 T 23-04-2016 LT40_RS07225 0ba8daa96c613b6633c664050a1fca96 179 Pfam PF00994 Probable molybdopterin binding domain 15 156 3.6E-31 T 23-04-2016 IPR001453 MoaB/Mog domain LT40_RS03635 8cc5fab22c7768b533dd779413034cea 533 Gene3D G3DSA:3.10.105.10 287 502 5.4E-63 T 23-04-2016 LT40_RS03635 8cc5fab22c7768b533dd779413034cea 533 SUPERFAMILY SSF53850 27 530 8.69E-146 T 23-04-2016 LT40_RS03635 8cc5fab22c7768b533dd779413034cea 533 Gene3D G3DSA:3.90.76.10 36 216 8.1E-47 T 23-04-2016 LT40_RS03635 8cc5fab22c7768b533dd779413034cea 533 PANTHER PTHR30290 19 533 1.6E-202 T 23-04-2016 LT40_RS03635 8cc5fab22c7768b533dd779413034cea 533 PIRSF PIRSF002741 10 531 2.1E-119 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS03635 8cc5fab22c7768b533dd779413034cea 533 PANTHER PTHR30290:SF14 19 533 1.6E-202 T 23-04-2016 LT40_RS03635 8cc5fab22c7768b533dd779413034cea 533 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 76 98 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site LT40_RS03635 8cc5fab22c7768b533dd779413034cea 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 450 1.1E-94 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 PANTHER PTHR10055:SF11 1 337 3.1E-201 T 23-04-2016 LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 2.2E-17 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 2.2E-17 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 2.2E-17 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 204 214 2.2E-17 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 Pfam PF00579 tRNA synthetases class I (W and Y) 3 282 4.7E-53 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 Gene3D G3DSA:3.40.50.620 3 213 3.5E-72 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 SUPERFAMILY SSF160113 354 409 1.06E-8 T 23-04-2016 IPR010879 Domain of unknown function DUF1508 LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 SUPERFAMILY SSF52374 4 333 2.1E-77 T 23-04-2016 LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 Gene3D G3DSA:1.10.240.10 214 299 7.6E-26 T 23-04-2016 LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 PANTHER PTHR10055 1 337 3.1E-201 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 334 36.337 T 23-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 LT40_RS03910 28da8eb7119ba598c8355ea16a387a72 449 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 333 8.5E-95 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 LT40_RS19835 ce20fc5bbd1bc7fad49e520ab88ee24a 360 Pfam PF03462 PCRF domain 12 205 4.3E-73 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LT40_RS19835 ce20fc5bbd1bc7fad49e520ab88ee24a 360 Pfam PF00472 RF-1 domain 214 323 8.1E-43 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LT40_RS19835 ce20fc5bbd1bc7fad49e520ab88ee24a 360 Gene3D G3DSA:1.20.58.410 8 95 1.8E-20 T 23-04-2016 LT40_RS19835 ce20fc5bbd1bc7fad49e520ab88ee24a 360 SMART SM00937 65 180 4.4E-68 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LT40_RS19835 ce20fc5bbd1bc7fad49e520ab88ee24a 360 PANTHER PTHR11075:SF9 1 358 6.8E-176 T 23-04-2016 LT40_RS19835 ce20fc5bbd1bc7fad49e520ab88ee24a 360 Gene3D G3DSA:3.30.160.20 213 287 2.8E-36 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain LT40_RS19835 ce20fc5bbd1bc7fad49e520ab88ee24a 360 SUPERFAMILY SSF75620 12 355 7.98E-135 T 23-04-2016 LT40_RS19835 ce20fc5bbd1bc7fad49e520ab88ee24a 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LT40_RS19835 ce20fc5bbd1bc7fad49e520ab88ee24a 360 PANTHER PTHR11075 1 358 6.8E-176 T 23-04-2016 LT40_RS19835 ce20fc5bbd1bc7fad49e520ab88ee24a 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.845 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 LT40_RS19835 ce20fc5bbd1bc7fad49e520ab88ee24a 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 9.5E-168 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 LT40_RS11940 58df30f5b04ef1a4fe76cef7e59a214e 383 Gene3D G3DSA:3.20.20.70 235 379 5.8E-32 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS11940 58df30f5b04ef1a4fe76cef7e59a214e 383 PANTHER PTHR11911 215 379 1.9E-27 T 23-04-2016 LT40_RS11940 58df30f5b04ef1a4fe76cef7e59a214e 383 Pfam PF00571 CBS domain 323 377 4.6E-11 T 23-04-2016 IPR000644 CBS domain LT40_RS11940 58df30f5b04ef1a4fe76cef7e59a214e 383 Pfam PF00571 CBS domain 242 295 6.3E-12 T 23-04-2016 IPR000644 CBS domain LT40_RS11940 58df30f5b04ef1a4fe76cef7e59a214e 383 SMART SM00116 248 296 7.8E-11 T 23-04-2016 IPR000644 CBS domain LT40_RS11940 58df30f5b04ef1a4fe76cef7e59a214e 383 SMART SM00116 330 378 5.4E-10 T 23-04-2016 IPR000644 CBS domain LT40_RS11940 58df30f5b04ef1a4fe76cef7e59a214e 383 SUPERFAMILY SSF54631 231 378 1.02E-32 T 23-04-2016 LT40_RS11940 58df30f5b04ef1a4fe76cef7e59a214e 383 Pfam PF04982 HPP family 67 183 6.3E-37 T 23-04-2016 IPR007065 HPP LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 PANTHER PTHR10629:SF32 183 294 1.1E-34 T 23-04-2016 LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 PANTHER PTHR10629:SF32 27 146 1.1E-34 T 23-04-2016 LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 Gene3D G3DSA:3.40.50.150 188 278 1.1E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 Gene3D G3DSA:3.40.50.150 28 147 1.1E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 Pfam PF00145 C-5 cytosine-specific DNA methylase 188 238 2.6E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 Pfam PF00145 C-5 cytosine-specific DNA methylase 28 145 1.3E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 PANTHER PTHR10629 183 294 1.1E-34 T 23-04-2016 LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 PANTHER PTHR10629 27 146 1.1E-34 T 23-04-2016 LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 SUPERFAMILY SSF53335 191 276 6.5E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 SUPERFAMILY SSF53335 608 705 6.5E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 SUPERFAMILY SSF53335 28 148 6.5E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08580 49bb7c47f07540dd90bb462594fc6c43 720 Gene3D G3DSA:3.90.120.10 652 695 6.8E-5 T 23-04-2016 LT40_RS01295 e021b20c7e6ae44802cbe21d79eab570 392 PANTHER PTHR23522:SF3 5 384 3.2E-113 T 23-04-2016 LT40_RS01295 e021b20c7e6ae44802cbe21d79eab570 392 Gene3D G3DSA:1.20.1250.20 11 182 1.8E-16 T 23-04-2016 LT40_RS01295 e021b20c7e6ae44802cbe21d79eab570 392 Gene3D G3DSA:1.20.1250.20 200 380 9.7E-27 T 23-04-2016 LT40_RS01295 e021b20c7e6ae44802cbe21d79eab570 392 Pfam PF12832 MFS_1 like family 11 365 1.9E-82 T 23-04-2016 IPR024989 Major facilitator superfamily associated domain LT40_RS01295 e021b20c7e6ae44802cbe21d79eab570 392 PANTHER PTHR23522 5 384 3.2E-113 T 23-04-2016 LT40_RS01295 e021b20c7e6ae44802cbe21d79eab570 392 SUPERFAMILY SSF103473 9 384 6.02E-49 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS01295 e021b20c7e6ae44802cbe21d79eab570 392 PIRSF PIRSF004925 5 392 3.5E-106 T 23-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter LT40_RS18415 075d9686a29b414a07c721b6015c2337 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 6.4E-40 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal LT40_RS18415 075d9686a29b414a07c721b6015c2337 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.254 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18415 075d9686a29b414a07c721b6015c2337 179 Gene3D G3DSA:3.30.1440.10 1 179 3.0E-75 T 23-04-2016 IPR022803 Ribosomal protein L5 domain LT40_RS18415 075d9686a29b414a07c721b6015c2337 179 Pfam PF00281 Ribosomal protein L5 24 80 6.9E-26 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal LT40_RS18415 075d9686a29b414a07c721b6015c2337 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 23-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18415 075d9686a29b414a07c721b6015c2337 179 PANTHER PTHR11994 1 178 2.1E-92 T 23-04-2016 LT40_RS18415 075d9686a29b414a07c721b6015c2337 179 SUPERFAMILY SSF55282 3 179 2.83E-75 T 23-04-2016 IPR022803 Ribosomal protein L5 domain LT40_RS18415 075d9686a29b414a07c721b6015c2337 179 PIRSF PIRSF002161 1 179 4.5E-61 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 LT40_RS11880 715b3076b399a939c70c6c61a995693f 572 Gene3D G3DSA:3.40.190.10 221 329 7.0E-29 T 23-04-2016 LT40_RS11880 715b3076b399a939c70c6c61a995693f 572 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 106 477 2.9E-83 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS11880 715b3076b399a939c70c6c61a995693f 572 Gene3D G3DSA:3.90.76.10 75 220 5.2E-39 T 23-04-2016 LT40_RS11880 715b3076b399a939c70c6c61a995693f 572 Gene3D G3DSA:3.10.105.10 330 536 2.5E-51 T 23-04-2016 LT40_RS11880 715b3076b399a939c70c6c61a995693f 572 SUPERFAMILY SSF53850 59 567 2.71E-123 T 23-04-2016 LT40_RS11880 715b3076b399a939c70c6c61a995693f 572 PIRSF PIRSF002741 1 570 3.5E-95 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS11880 715b3076b399a939c70c6c61a995693f 572 PANTHER PTHR30290 62 567 7.4E-116 T 23-04-2016 LT40_RS11880 715b3076b399a939c70c6c61a995693f 572 PANTHER PTHR30290 1 36 7.4E-116 T 23-04-2016 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 Pfam PF00391 PEP-utilising enzyme, mobile domain 383 454 5.2E-26 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 788 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 343 4.2E-119 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 693 711 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 413 424 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 Gene3D G3DSA:3.20.20.60 480 786 2.3E-105 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 SUPERFAMILY SSF52009 346 463 1.57E-34 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 Gene3D G3DSA:3.50.30.10 372 469 2.1E-35 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 Gene3D G3DSA:3.30.1490.20 3 192 6.7E-67 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 SUPERFAMILY SSF51621 461 786 2.92E-99 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 SUPERFAMILY SSF56059 3 383 1.04E-107 T 23-04-2016 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 Gene3D G3DSA:3.30.470.20 196 356 2.9E-61 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 PANTHER PTHR22931 282 791 0.0 T 23-04-2016 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 481 781 9.3E-62 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 PIRSF PIRSF000854 1 791 0.0 T 23-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 PANTHER PTHR22931:SF7 2 266 0.0 T 23-04-2016 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 PANTHER PTHR22931:SF7 282 791 0.0 T 23-04-2016 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 PANTHER PTHR22931 2 266 0.0 T 23-04-2016 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 693 708 9.0E-6 T 23-04-2016 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 710 725 9.0E-6 T 23-04-2016 LT40_RS01900 2d223c65a54da9e515db328b63685ba5 791 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 746 758 9.0E-6 T 23-04-2016 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 SUPERFAMILY SSF51011 478 559 3.68E-17 T 23-04-2016 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 PANTHER PTHR10357:SF164 6 413 4.1E-284 T 23-04-2016 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 PANTHER PTHR10357:SF164 452 588 4.1E-284 T 23-04-2016 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 SUPERFAMILY SSF56112 853 1050 4.29E-10 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 Gene3D G3DSA:2.60.40.1180 476 561 1.5E-15 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 PANTHER PTHR10357 6 413 4.1E-284 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 PANTHER PTHR10357 452 588 4.1E-284 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 Gene3D G3DSA:3.90.400.10 115 184 5.0E-26 T 23-04-2016 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 16 561 5.4E-284 T 23-04-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 Pfam PF16657 Maltogenic Amylase, C-terminal domain 476 558 5.7E-27 T 23-04-2016 IPR032091 Maltogenic Amylase, C-terminal LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 SUPERFAMILY SSF51445 14 339 5.44E-130 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 SUPERFAMILY SSF51445 366 473 5.44E-130 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 SMART SM00642 24 423 3.6E-104 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 Pfam PF00128 Alpha amylase, catalytic domain 39 397 5.6E-75 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 Gene3D G3DSA:3.20.20.80 14 114 7.4E-107 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 Gene3D G3DSA:3.20.20.80 366 475 7.4E-107 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 Gene3D G3DSA:3.20.20.80 188 334 7.4E-107 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11085 b6fa2cc714c97a422f3ca5012ec86558 1107 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 578 1099 7.4E-188 T 23-04-2016 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain LT40_RS05475 7fcb11f2ef94bc1da86ce67d543d9d8a 316 PANTHER PTHR30273 7 313 9.3E-77 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component LT40_RS05475 7fcb11f2ef94bc1da86ce67d543d9d8a 316 PANTHER PTHR30273:SF3 7 313 9.3E-77 T 23-04-2016 LT40_RS05475 7fcb11f2ef94bc1da86ce67d543d9d8a 316 Pfam PF04773 FecR protein 112 199 3.8E-12 T 23-04-2016 IPR006860 FecR protein LT40_RS05475 7fcb11f2ef94bc1da86ce67d543d9d8a 316 PIRSF PIRSF018266 5 312 4.3E-76 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component LT40_RS05475 7fcb11f2ef94bc1da86ce67d543d9d8a 316 Pfam PF16220 Domain of unknown function (DUF4880) 16 57 3.1E-11 T 23-04-2016 IPR032623 FecR, N-terminal LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 SUPERFAMILY SSF74731 3 116 4.71E-50 T 23-04-2016 LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 PANTHER PTHR10986:SF12 2 117 4.6E-66 T 23-04-2016 LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.101 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 6.0E-22 T 23-04-2016 LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 Pfam PF00453 Ribosomal protein L20 3 109 2.0E-49 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 Gene3D G3DSA:1.10.1900.20 55 117 1.6E-30 T 23-04-2016 LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.8E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.8E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.8E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 PANTHER PTHR10986 2 117 4.6E-66 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.4E-51 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LT40_RS07520 3f9f2f32711da380bafa990c27d8ce69 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 LT40_RS03980 1469e802b51288a2320d32bc45152b17 181 SUPERFAMILY SSF49401 28 178 1.89E-15 T 23-04-2016 IPR008966 Adhesion domain LT40_RS03980 1469e802b51288a2320d32bc45152b17 181 PANTHER PTHR33420 4 181 3.1E-17 T 23-04-2016 LT40_RS03980 1469e802b51288a2320d32bc45152b17 181 Pfam PF00419 Fimbrial protein 29 180 3.0E-9 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LT40_RS03980 1469e802b51288a2320d32bc45152b17 181 Gene3D G3DSA:2.60.40.1090 27 179 1.1E-18 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LT40_RS04650 983d3580670b6a18999f9f953fa6dbc1 228 Pfam PF02565 Recombination protein O C terminal 83 223 6.4E-25 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LT40_RS04650 983d3580670b6a18999f9f953fa6dbc1 228 TIGRFAM TIGR00613 reco: DNA repair protein RecO 12 146 3.2E-19 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LT40_RS04650 983d3580670b6a18999f9f953fa6dbc1 228 SUPERFAMILY SSF50249 7 74 3.6E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS04650 983d3580670b6a18999f9f953fa6dbc1 228 SUPERFAMILY SSF57863 86 143 6.8E-10 T 23-04-2016 LT40_RS04650 983d3580670b6a18999f9f953fa6dbc1 228 Pfam PF11967 Recombination protein O N terminal 8 74 8.4E-15 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal LT40_RS04650 983d3580670b6a18999f9f953fa6dbc1 228 Gene3D G3DSA:2.40.50.140 10 73 1.7E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS04650 983d3580670b6a18999f9f953fa6dbc1 228 Hamap MF_00201 DNA repair protein RecO [recO]. 4 228 19.134 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LT40_RS04650 983d3580670b6a18999f9f953fa6dbc1 228 PANTHER PTHR33991 8 226 3.8E-45 T 23-04-2016 LT40_RS11210 4605ddcf52bc1bb340c9f9fd90dd8db0 394 SUPERFAMILY SSF54506 2 179 1.96E-70 T 23-04-2016 LT40_RS11210 4605ddcf52bc1bb340c9f9fd90dd8db0 394 PANTHER PTHR30349:SF21 1 378 3.2E-126 T 23-04-2016 LT40_RS11210 4605ddcf52bc1bb340c9f9fd90dd8db0 394 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 1 392 6.6E-227 T 23-04-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 UniPathway: UPA00946 LT40_RS11210 4605ddcf52bc1bb340c9f9fd90dd8db0 394 Pfam PF04303 PrpF protein 3 389 6.0E-175 T 23-04-2016 IPR007400 PrpF protein LT40_RS11210 4605ddcf52bc1bb340c9f9fd90dd8db0 394 Gene3D G3DSA:3.10.310.10 2 194 7.2E-90 T 23-04-2016 LT40_RS11210 4605ddcf52bc1bb340c9f9fd90dd8db0 394 Gene3D G3DSA:3.10.310.10 195 372 9.6E-79 T 23-04-2016 LT40_RS11210 4605ddcf52bc1bb340c9f9fd90dd8db0 394 PANTHER PTHR30349 1 378 3.2E-126 T 23-04-2016 LT40_RS11210 4605ddcf52bc1bb340c9f9fd90dd8db0 394 SUPERFAMILY SSF54506 186 391 1.67E-76 T 23-04-2016 LT40_RS08165 424eaad3794798493bd3001b2f305436 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 212 1.5E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS08165 424eaad3794798493bd3001b2f305436 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 107 2.8E-15 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS08165 424eaad3794798493bd3001b2f305436 216 SUPERFAMILY SSF161098 14 198 7.72E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS08165 424eaad3794798493bd3001b2f305436 216 PANTHER PTHR30614 1 216 1.9E-58 T 23-04-2016 LT40_RS08165 424eaad3794798493bd3001b2f305436 216 Gene3D G3DSA:1.10.3720.10 14 213 1.9E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11810 e0f7ab28a1917adadafe90ebb4fc8558 366 SMART SM00382 41 184 7.4E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS11810 e0f7ab28a1917adadafe90ebb4fc8558 366 SUPERFAMILY SSF52540 25 263 1.22E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11810 e0f7ab28a1917adadafe90ebb4fc8558 366 Gene3D G3DSA:1.10.8.60 194 263 1.6E-23 T 23-04-2016 LT40_RS11810 e0f7ab28a1917adadafe90ebb4fc8558 366 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 45 58 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS11810 e0f7ab28a1917adadafe90ebb4fc8558 366 SUPERFAMILY SSF46689 234 342 2.6E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS11810 e0f7ab28a1917adadafe90ebb4fc8558 366 PANTHER PTHR32071 22 356 1.3E-148 T 23-04-2016 LT40_RS11810 e0f7ab28a1917adadafe90ebb4fc8558 366 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 234 243 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS11810 e0f7ab28a1917adadafe90ebb4fc8558 366 Gene3D G3DSA:1.10.10.60 279 341 6.4E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS11810 e0f7ab28a1917adadafe90ebb4fc8558 366 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 107 122 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS11810 e0f7ab28a1917adadafe90ebb4fc8558 366 Pfam PF00158 Sigma-54 interaction domain 24 187 1.8E-68 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS11810 e0f7ab28a1917adadafe90ebb4fc8558 366 Gene3D G3DSA:3.40.50.300 24 193 2.3E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03530 81098744e2760a1561df12414996c3a6 382 Gene3D G3DSA:3.20.20.70 107 334 6.0E-14 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS03530 81098744e2760a1561df12414996c3a6 382 SUPERFAMILY SSF102114 107 316 9.42E-14 T 23-04-2016 LT40_RS03530 81098744e2760a1561df12414996c3a6 382 PANTHER PTHR30544:SF5 7 361 2.4E-180 T 23-04-2016 LT40_RS03530 81098744e2760a1561df12414996c3a6 382 PIRSF PIRSF006004 4 367 9.8E-153 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS03530 81098744e2760a1561df12414996c3a6 382 PANTHER PTHR30544 7 361 2.4E-180 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS03530 81098744e2760a1561df12414996c3a6 382 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 7 354 73.226 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS03530 81098744e2760a1561df12414996c3a6 382 Pfam PF04055 Radical SAM superfamily 111 283 1.3E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS03530 81098744e2760a1561df12414996c3a6 382 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 358 4.6E-145 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS15720 2bcfd5eb0786355d502555a4150ffbc0 256 Pfam PF00005 ABC transporter 21 149 4.1E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS15720 2bcfd5eb0786355d502555a4150ffbc0 256 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS15720 2bcfd5eb0786355d502555a4150ffbc0 256 PANTHER PTHR24220 7 243 3.1E-106 T 23-04-2016 LT40_RS15720 2bcfd5eb0786355d502555a4150ffbc0 256 Gene3D G3DSA:3.40.50.300 2 212 5.0E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15720 2bcfd5eb0786355d502555a4150ffbc0 256 SMART SM00382 30 199 2.8E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS15720 2bcfd5eb0786355d502555a4150ffbc0 256 PANTHER PTHR24220:SF466 7 243 3.1E-106 T 23-04-2016 LT40_RS15720 2bcfd5eb0786355d502555a4150ffbc0 256 SUPERFAMILY SSF52540 3 214 3.73E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06725 5695768ee9205a2af4a5a8b2b11f5b47 239 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 4 236 8.0E-33 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 LT40_RS06725 5695768ee9205a2af4a5a8b2b11f5b47 239 Pfam PF02654 Cobalamin-5-phosphate synthase 7 235 1.3E-49 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 LT40_RS06725 5695768ee9205a2af4a5a8b2b11f5b47 239 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 239 46.972 T 23-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 LT40_RS06725 5695768ee9205a2af4a5a8b2b11f5b47 239 PANTHER PTHR34148 4 239 1.5E-50 T 23-04-2016 LT40_RS06725 5695768ee9205a2af4a5a8b2b11f5b47 239 PANTHER PTHR34148:SF1 4 239 1.5E-50 T 23-04-2016 LT40_RS14165 85e79580491fcfa9428fad62bc63213c 108 Pfam PF04267 Sarcosine oxidase, delta subunit family 4 84 3.5E-35 T 23-04-2016 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 LT40_RS14165 85e79580491fcfa9428fad62bc63213c 108 TIGRFAM TIGR01374 soxD: sarcosine oxidase, delta subunit family 3 86 1.8E-36 T 23-04-2016 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 LT40_RS10730 d0f81c237814a6a9c7e6baa65bfeb28e 351 Pfam PF02780 Transketolase, C-terminal domain 226 340 6.6E-39 T 23-04-2016 IPR033248 Transketolase, C-terminal domain LT40_RS10730 d0f81c237814a6a9c7e6baa65bfeb28e 351 Gene3D G3DSA:3.40.50.920 228 345 1.8E-46 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS10730 d0f81c237814a6a9c7e6baa65bfeb28e 351 PANTHER PTHR11624 10 351 1.3E-236 T 23-04-2016 IPR033247 Transketolase family LT40_RS10730 d0f81c237814a6a9c7e6baa65bfeb28e 351 PANTHER PTHR11624:SF55 10 351 1.3E-236 T 23-04-2016 LT40_RS10730 d0f81c237814a6a9c7e6baa65bfeb28e 351 SMART SM00861 18 193 4.4E-71 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS10730 d0f81c237814a6a9c7e6baa65bfeb28e 351 SUPERFAMILY SSF52518 16 234 5.35E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS10730 d0f81c237814a6a9c7e6baa65bfeb28e 351 Pfam PF02779 Transketolase, pyrimidine binding domain 18 192 3.5E-44 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS10730 d0f81c237814a6a9c7e6baa65bfeb28e 351 SUPERFAMILY SSF52922 219 349 7.07E-44 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS10730 d0f81c237814a6a9c7e6baa65bfeb28e 351 Gene3D G3DSA:3.40.50.970 16 226 7.1E-82 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS01455 448000d2b8e96817033b6605d983a5bc 278 SUPERFAMILY SSF53850 92 273 8.32E-19 T 23-04-2016 LT40_RS01455 448000d2b8e96817033b6605d983a5bc 278 SUPERFAMILY SSF46785 8 111 4.35E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01455 448000d2b8e96817033b6605d983a5bc 278 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 64 6.2E-13 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01455 448000d2b8e96817033b6605d983a5bc 278 Gene3D G3DSA:1.10.10.10 9 82 3.1E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01455 448000d2b8e96817033b6605d983a5bc 278 Gene3D G3DSA:3.40.190.10 83 190 3.5E-11 T 23-04-2016 LT40_RS01455 448000d2b8e96817033b6605d983a5bc 278 PANTHER PTHR30579:SF0 9 225 1.4E-38 T 23-04-2016 LT40_RS01455 448000d2b8e96817033b6605d983a5bc 278 PANTHER PTHR30579 9 225 1.4E-38 T 23-04-2016 LT40_RS01455 448000d2b8e96817033b6605d983a5bc 278 Pfam PF03466 LysR substrate binding domain 93 225 6.9E-16 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS01455 448000d2b8e96817033b6605d983a5bc 278 Gene3D G3DSA:3.40.190.10 191 225 1.4E-4 T 23-04-2016 LT40_RS00655 dadc2b6817e2548a4243be66675f53fb 885 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 569 857 7.1E-92 T 23-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal LT40_RS00655 dadc2b6817e2548a4243be66675f53fb 885 PANTHER PTHR34697:SF2 24 875 4.7E-293 T 23-04-2016 LT40_RS00655 dadc2b6817e2548a4243be66675f53fb 885 SUPERFAMILY SSF55729 680 855 3.44E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS00655 dadc2b6817e2548a4243be66675f53fb 885 PANTHER PTHR34697 24 875 4.7E-293 T 23-04-2016 LT40_RS00655 dadc2b6817e2548a4243be66675f53fb 885 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 42 333 5.2E-12 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LT40_RS06490 06c3f334952df4e0bbd0abf9f268d5ff 398 Gene3D G3DSA:3.90.1150.10 283 394 1.6E-8 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS06490 06c3f334952df4e0bbd0abf9f268d5ff 398 PANTHER PTHR11601:SF40 1 393 2.5E-84 T 23-04-2016 LT40_RS06490 06c3f334952df4e0bbd0abf9f268d5ff 398 PANTHER PTHR11601 1 393 2.5E-84 T 23-04-2016 LT40_RS06490 06c3f334952df4e0bbd0abf9f268d5ff 398 Gene3D G3DSA:3.40.640.10 49 282 3.5E-45 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS06490 06c3f334952df4e0bbd0abf9f268d5ff 398 SUPERFAMILY SSF53383 14 393 1.88E-61 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS06490 06c3f334952df4e0bbd0abf9f268d5ff 398 Pfam PF00266 Aminotransferase class-V 50 372 2.3E-29 T 23-04-2016 IPR000192 Aminotransferase class V domain LT40_RS12195 9adc92529ab7b6ddce1a9f454d20cd7f 406 PANTHER PTHR10799 267 393 4.6E-15 T 23-04-2016 LT40_RS12195 9adc92529ab7b6ddce1a9f454d20cd7f 406 PANTHER PTHR10799 81 226 4.6E-15 T 23-04-2016 LT40_RS12195 9adc92529ab7b6ddce1a9f454d20cd7f 406 Gene3D G3DSA:3.30.70.270 235 396 1.5E-43 T 23-04-2016 LT40_RS12195 9adc92529ab7b6ddce1a9f454d20cd7f 406 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 231 395 3.2E-39 T 23-04-2016 IPR000160 GGDEF domain LT40_RS12195 9adc92529ab7b6ddce1a9f454d20cd7f 406 Pfam PF00990 Diguanylate cyclase, GGDEF domain 234 393 4.1E-40 T 23-04-2016 IPR000160 GGDEF domain LT40_RS12195 9adc92529ab7b6ddce1a9f454d20cd7f 406 PANTHER PTHR10799:SF750 267 393 4.6E-15 T 23-04-2016 LT40_RS12195 9adc92529ab7b6ddce1a9f454d20cd7f 406 PANTHER PTHR10799:SF750 81 226 4.6E-15 T 23-04-2016 LT40_RS12195 9adc92529ab7b6ddce1a9f454d20cd7f 406 SMART SM00267 223 398 9.3E-49 T 23-04-2016 IPR000160 GGDEF domain LT40_RS12195 9adc92529ab7b6ddce1a9f454d20cd7f 406 SUPERFAMILY SSF55073 239 396 1.45E-38 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS18220 78b8925b4334906bc3a86c7368fc2dce 116 PANTHER PTHR10072 9 116 6.2E-47 T 23-04-2016 LT40_RS18220 78b8925b4334906bc3a86c7368fc2dce 116 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 111 3.4E-19 T 23-04-2016 IPR000361 FeS cluster biogenesis LT40_RS18220 78b8925b4334906bc3a86c7368fc2dce 116 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 116 36.139 T 23-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 LT40_RS18220 78b8925b4334906bc3a86c7368fc2dce 116 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 97 114 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site LT40_RS18220 78b8925b4334906bc3a86c7368fc2dce 116 SUPERFAMILY SSF89360 5 102 3.14E-31 T 23-04-2016 IPR000361 FeS cluster biogenesis LT40_RS18220 78b8925b4334906bc3a86c7368fc2dce 116 Gene3D G3DSA:2.60.300.12 7 102 5.1E-33 T 23-04-2016 IPR000361 FeS cluster biogenesis LT40_RS18220 78b8925b4334906bc3a86c7368fc2dce 116 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 12 115 9.4E-38 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 LT40_RS19970 7a5529675a8ab999c744bf23da670cda 331 Pfam PF08468 Methyltransferase small domain N-terminal 5 153 5.7E-40 T 23-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS19970 7a5529675a8ab999c744bf23da670cda 331 Pfam PF05175 Methyltransferase small domain 162 328 5.1E-55 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 LT40_RS19970 7a5529675a8ab999c744bf23da670cda 331 SUPERFAMILY SSF53335 96 306 4.93E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS19970 7a5529675a8ab999c744bf23da670cda 331 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 1 331 40.15 T 23-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS19970 7a5529675a8ab999c744bf23da670cda 331 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 260 266 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LT40_RS19970 7a5529675a8ab999c744bf23da670cda 331 PANTHER PTHR18895:SF70 47 330 1.4E-85 T 23-04-2016 LT40_RS19970 7a5529675a8ab999c744bf23da670cda 331 Gene3D G3DSA:3.40.50.150 160 330 3.4E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS19970 7a5529675a8ab999c744bf23da670cda 331 PANTHER PTHR18895 47 330 1.4E-85 T 23-04-2016 LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 PANTHER PTHR26402:SF151 1 154 2.9E-36 T 23-04-2016 LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 PANTHER PTHR26402 1 154 2.9E-36 T 23-04-2016 LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 SMART SM00421 94 151 1.0E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 SUPERFAMILY SSF46894 89 156 5.44E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 Gene3D G3DSA:1.10.10.10 69 157 1.1E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 Gene3D G3DSA:3.40.50.2300 1 68 3.0E-13 T 23-04-2016 LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 Pfam PF00072 Response regulator receiver domain 1 64 1.1E-9 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 Pfam PF00196 Bacterial regulatory proteins, luxR family 99 151 4.9E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 SUPERFAMILY SSF52172 1 75 8.54E-14 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 127 139 1.9E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 97 111 1.9E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 111 127 1.9E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS06900 b275479504518ee9e71d49e4102fa7f0 157 ProSitePatterns PS00622 LuxR-type HTH domain signature. 111 138 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS05460 ae25ff6d29446a891f3d1bf42bede0a3 102 PANTHER PTHR41791 2 100 3.1E-24 T 23-04-2016 LT40_RS05460 ae25ff6d29446a891f3d1bf42bede0a3 102 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 14 92 1.5E-5 T 23-04-2016 IPR009241 Toxin HigB-like LT40_RS05460 ae25ff6d29446a891f3d1bf42bede0a3 102 PIRSF PIRSF028744 1 102 6.9E-38 T 23-04-2016 IPR014056 Addiction module killer protein, predicted LT40_RS05460 ae25ff6d29446a891f3d1bf42bede0a3 102 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 4 96 7.7E-37 T 23-04-2016 IPR014056 Addiction module killer protein, predicted LT40_RS05460 ae25ff6d29446a891f3d1bf42bede0a3 102 PANTHER PTHR41791:SF1 2 100 3.1E-24 T 23-04-2016 LT40_RS02340 eb4c892e037675ab3a2d548c1290201d 400 PANTHER PTHR33308:SF3 30 387 1.0E-36 T 23-04-2016 LT40_RS02340 eb4c892e037675ab3a2d548c1290201d 400 PANTHER PTHR33308 30 387 1.0E-36 T 23-04-2016 LT40_RS02340 eb4c892e037675ab3a2d548c1290201d 400 Pfam PF10135 Rod binding protein 54 105 1.5E-14 T 23-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal LT40_RS02340 eb4c892e037675ab3a2d548c1290201d 400 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 18 383 8.4E-82 T 23-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- LT40_RS02340 eb4c892e037675ab3a2d548c1290201d 400 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 246 384 5.9E-22 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LT40_RS02340 eb4c892e037675ab3a2d548c1290201d 400 SMART SM00047 230 387 2.9E-36 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 Gene3D G3DSA:3.40.250.10 262 352 6.0E-15 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 SUPERFAMILY SSF52821 254 352 2.75E-20 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 PANTHER PTHR12231:SF83 254 351 9.7E-45 T 23-04-2016 LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 PANTHER PTHR12231:SF83 1 30 9.7E-45 T 23-04-2016 LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 Pfam PF00581 Rhodanese-like domain 15 101 4.0E-8 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 Pfam PF00581 Rhodanese-like domain 277 351 8.6E-7 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 Pfam PF00581 Rhodanese-like domain 132 225 8.1E-9 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 SUPERFAMILY SSF52821 373 524 3.14E-28 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 SMART SM00450 8 105 4.4E-13 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 SMART SM00450 377 472 0.086 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 SMART SM00450 131 229 9.2E-6 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 SMART SM00450 267 363 3.2E-4 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 Gene3D G3DSA:3.40.250.10 14 113 1.2E-18 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 SUPERFAMILY SSF52821 106 235 2.23E-29 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 Gene3D G3DSA:3.40.250.10 119 236 1.2E-18 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 Gene3D G3DSA:3.40.250.10 360 478 1.1E-16 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 SUPERFAMILY SSF52821 14 121 3.4E-24 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 PANTHER PTHR12231 254 351 9.7E-45 T 23-04-2016 LT40_RS05130 8daa9ff769a1e67f3d9a96a70ee4d13b 527 PANTHER PTHR12231 1 30 9.7E-45 T 23-04-2016 LT40_RS14110 7d3a9417e54e6722531db057c3424818 236 Gene3D G3DSA:3.30.420.10 37 213 1.6E-34 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS14110 7d3a9417e54e6722531db057c3424818 236 SUPERFAMILY SSF53098 32 213 4.83E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS14110 7d3a9417e54e6722531db057c3424818 236 Pfam PF00929 Exonuclease 43 201 2.0E-11 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS14110 7d3a9417e54e6722531db057c3424818 236 SMART SM00479 41 211 3.3E-9 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS14110 7d3a9417e54e6722531db057c3424818 236 PANTHER PTHR30231 37 217 8.9E-25 T 23-04-2016 LT40_RS11020 8d42edbd5f46bc2b2a2ba09261e7f0a8 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 12 265 7.6E-56 T 23-04-2016 IPR023214 HAD-like domain LT40_RS11020 8d42edbd5f46bc2b2a2ba09261e7f0a8 275 Gene3D G3DSA:3.40.50.1000 7 79 7.7E-44 T 23-04-2016 IPR023214 HAD-like domain LT40_RS11020 8d42edbd5f46bc2b2a2ba09261e7f0a8 275 Gene3D G3DSA:3.40.50.1000 184 270 7.7E-44 T 23-04-2016 IPR023214 HAD-like domain LT40_RS11020 8d42edbd5f46bc2b2a2ba09261e7f0a8 275 SUPERFAMILY SSF56784 9 270 3.68E-62 T 23-04-2016 IPR023214 HAD-like domain LT40_RS11020 8d42edbd5f46bc2b2a2ba09261e7f0a8 275 PANTHER PTHR10000:SF8 9 271 3.2E-57 T 23-04-2016 LT40_RS11020 8d42edbd5f46bc2b2a2ba09261e7f0a8 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 265 7.8E-57 T 23-04-2016 IPR000150 Cof protein GO:0016787 LT40_RS11020 8d42edbd5f46bc2b2a2ba09261e7f0a8 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 219 241 - T 23-04-2016 LT40_RS11020 8d42edbd5f46bc2b2a2ba09261e7f0a8 275 PANTHER PTHR10000 9 271 3.2E-57 T 23-04-2016 LT40_RS11020 8d42edbd5f46bc2b2a2ba09261e7f0a8 275 Gene3D G3DSA:3.30.1240.10 93 183 3.1E-9 T 23-04-2016 LT40_RS11020 8d42edbd5f46bc2b2a2ba09261e7f0a8 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 11 22 - T 23-04-2016 IPR000150 Cof protein GO:0016787 LT40_RS11020 8d42edbd5f46bc2b2a2ba09261e7f0a8 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 238 5.3E-32 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 LT40_RS02720 ca7b5829e04acd082417b7b1b4b8b0e3 177 PANTHER PTHR30529 1 177 1.6E-43 T 23-04-2016 LT40_RS02720 ca7b5829e04acd082417b7b1b4b8b0e3 177 Pfam PF01292 Prokaryotic cytochrome b561 5 173 1.2E-22 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LT40_RS02720 ca7b5829e04acd082417b7b1b4b8b0e3 177 SUPERFAMILY SSF81342 3 173 7.85E-25 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 LT40_RS19735 6a19aac10917e70df16ba98c4b50a53c 576 PANTHER PTHR30505:SF0 1 561 5.4E-262 T 23-04-2016 LT40_RS19735 6a19aac10917e70df16ba98c4b50a53c 576 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 120 203 6.8E-33 T 23-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 LT40_RS19735 6a19aac10917e70df16ba98c4b50a53c 576 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 228 562 9.3E-143 T 23-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 LT40_RS19735 6a19aac10917e70df16ba98c4b50a53c 576 PANTHER PTHR30505 1 561 5.4E-262 T 23-04-2016 LT40_RS19735 6a19aac10917e70df16ba98c4b50a53c 576 SUPERFAMILY SSF52794 118 215 3.14E-34 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LT40_RS19735 6a19aac10917e70df16ba98c4b50a53c 576 SUPERFAMILY SSF52794 2 103 9.42E-22 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LT40_RS19735 6a19aac10917e70df16ba98c4b50a53c 576 Pfam PF02378 Phosphotransferase system, EIIC 243 506 5.5E-18 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LT40_RS19735 6a19aac10917e70df16ba98c4b50a53c 576 Gene3D G3DSA:3.40.50.2300 1 103 1.1E-22 T 23-04-2016 LT40_RS19735 6a19aac10917e70df16ba98c4b50a53c 576 Gene3D G3DSA:3.40.50.2300 115 215 1.8E-39 T 23-04-2016 LT40_RS19735 6a19aac10917e70df16ba98c4b50a53c 576 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 121 206 1.4E-17 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LT40_RS19735 6a19aac10917e70df16ba98c4b50a53c 576 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 89 3.1E-8 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 Pfam PF01134 Glucose inhibited division protein A 8 401 3.2E-166 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 SUPERFAMILY SSF51905 97 261 8.44E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 SUPERFAMILY SSF51905 7 66 8.44E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 PANTHER PTHR11806:SF0 2 627 0.0 T 23-04-2016 LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 Pfam PF13932 GidA associated domain 404 616 2.7E-70 T 23-04-2016 IPR026904 GidA associated domain 3 LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 370 393 - T 23-04-2016 IPR020595 MnmG-related, conserved site LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 SMART SM01228 546 617 3.3E-40 T 23-04-2016 LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 Gene3D G3DSA:3.50.50.60 7 235 2.1E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 275 289 - T 23-04-2016 IPR020595 MnmG-related, conserved site LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.245 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 5.4E-275 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 LT40_RS16070 c658797e6f38ca032a7633cf58155aa6 632 PANTHER PTHR11806 2 627 0.0 T 23-04-2016 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 Gene3D G3DSA:1.10.8.60 320 391 1.5E-26 T 23-04-2016 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 Pfam PF00158 Sigma-54 interaction domain 150 313 2.2E-62 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 Gene3D G3DSA:1.10.10.60 392 448 1.1E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 SUPERFAMILY SSF52172 8 192 2.42E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 SUPERFAMILY SSF52540 150 388 2.79E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 Gene3D G3DSA:3.40.50.2300 10 138 3.1E-32 T 23-04-2016 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 SUPERFAMILY SSF46689 360 448 2.9E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 SMART SM00382 167 310 1.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 PANTHER PTHR32071 5 448 1.4E-190 T 23-04-2016 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 Gene3D G3DSA:3.40.50.300 149 319 6.0E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 PANTHER PTHR32071:SF18 5 448 1.4E-190 T 23-04-2016 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 Pfam PF00072 Response regulator receiver domain 11 119 2.7E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 SMART SM00448 9 120 8.1E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS15655 a94de297afc9acfd7663aa9a6094521f 448 Pfam PF02954 Bacterial regulatory protein, Fis family 406 446 1.2E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.1E-21 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 106 125 1.1E-21 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 202 214 1.1E-21 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PRINTS PR01959 SuhB family inositol monophosphatase signature 160 186 1.1E-21 T 23-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PANTHER PTHR20854 1 262 3.0E-94 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 Gene3D G3DSA:3.40.190.80 152 265 6.1E-40 T 23-04-2016 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 Gene3D G3DSA:3.30.540.10 2 151 1.0E-48 T 23-04-2016 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site LT40_RS03470 156a03f4960355e2195004b532885c1f 271 SUPERFAMILY SSF56655 1 265 9.95E-83 T 23-04-2016 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PANTHER PTHR20854:SF4 1 262 3.0E-94 T 23-04-2016 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 215 229 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 6.3E-60 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 132 155 6.3E-60 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 6.3E-60 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 6.3E-60 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 212 236 6.3E-60 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 181 202 6.3E-60 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS03470 156a03f4960355e2195004b532885c1f 271 Pfam PF00459 Inositol monophosphatase family 1 258 2.5E-65 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 Pfam PF00672 HAMP domain 162 230 1.2E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 Gene3D G3DSA:3.30.450.20 282 391 2.3E-16 T 23-04-2016 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 SMART SM00388 408 498 4.7E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 284 399 4.2E-6 T 23-04-2016 IPR000014 PAS domain LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 SUPERFAMILY SSF55785 271 391 2.79E-14 T 23-04-2016 IPR000014 PAS domain LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 SUPERFAMILY SSF158472 181 230 1.27E-6 T 23-04-2016 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PANTHER PTHR24423 225 244 5.2E-147 T 23-04-2016 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PANTHER PTHR24423 461 659 5.2E-147 T 23-04-2016 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PANTHER PTHR24423 94 157 5.2E-147 T 23-04-2016 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PANTHER PTHR24423 281 436 5.2E-147 T 23-04-2016 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 549 660 4.9E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 Gene3D G3DSA:1.10.287.130 410 483 1.6E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 638 7.7E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 645 658 7.7E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 617 7.7E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 603 7.7E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 SMART SM00387 546 661 1.5E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 SUPERFAMILY SSF47384 404 497 1.57E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 Gene3D G3DSA:3.30.565.10 484 662 3.1E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 SMART SM00091 283 351 1.6E-5 T 23-04-2016 IPR000014 PAS domain LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 Pfam PF00512 His Kinase A (phospho-acceptor) domain 410 496 4.7E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PANTHER PTHR24423:SF450 225 244 5.2E-147 T 23-04-2016 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PANTHER PTHR24423:SF450 461 659 5.2E-147 T 23-04-2016 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PANTHER PTHR24423:SF450 94 157 5.2E-147 T 23-04-2016 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 PANTHER PTHR24423:SF450 281 436 5.2E-147 T 23-04-2016 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 SUPERFAMILY SSF55874 489 659 5.24E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 SMART SM00304 181 234 4.1E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS04115 1e5ea4cf0e6e1d418b32bce7b5a30621 671 Pfam PF00989 PAS fold 285 390 3.9E-10 T 23-04-2016 IPR013767 PAS fold GO:0006355 LT40_RS02630 932aa324bfa46bcd3b17b52acd658999 332 PANTHER PTHR30368 5 332 8.3E-169 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 LT40_RS02630 932aa324bfa46bcd3b17b52acd658999 332 PANTHER PTHR30368:SF2 5 332 8.3E-169 T 23-04-2016 LT40_RS02630 932aa324bfa46bcd3b17b52acd658999 332 SUPERFAMILY SSF53850 23 330 7.83E-83 T 23-04-2016 LT40_RS02630 932aa324bfa46bcd3b17b52acd658999 332 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 19 328 2.7E-132 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 LT40_RS02630 932aa324bfa46bcd3b17b52acd658999 332 Pfam PF13531 Bacterial extracellular solute-binding protein 33 280 4.4E-40 T 23-04-2016 LT40_RS02630 932aa324bfa46bcd3b17b52acd658999 332 Gene3D G3DSA:3.40.190.10 192 297 1.9E-24 T 23-04-2016 LT40_RS02630 932aa324bfa46bcd3b17b52acd658999 332 Gene3D G3DSA:3.40.190.10 25 169 1.8E-46 T 23-04-2016 LT40_RS13850 3f012b2e59fe30109edb68e9d379fac1 359 Gene3D G3DSA:2.40.30.10 21 117 7.3E-10 T 23-04-2016 LT40_RS13850 3f012b2e59fe30109edb68e9d379fac1 359 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 278 347 2.3E-11 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS13850 3f012b2e59fe30109edb68e9d379fac1 359 Gene3D G3DSA:3.40.50.80 126 251 2.4E-12 T 23-04-2016 LT40_RS13850 3f012b2e59fe30109edb68e9d379fac1 359 Pfam PF00970 Oxidoreductase FAD-binding domain 27 116 6.7E-5 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain LT40_RS13850 3f012b2e59fe30109edb68e9d379fac1 359 SUPERFAMILY SSF54292 247 352 3.8E-22 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS13850 3f012b2e59fe30109edb68e9d379fac1 359 SUPERFAMILY SSF52343 123 258 5.63E-14 T 23-04-2016 LT40_RS13850 3f012b2e59fe30109edb68e9d379fac1 359 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 305 313 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LT40_RS13850 3f012b2e59fe30109edb68e9d379fac1 359 SUPERFAMILY SSF63380 21 111 8.11E-10 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS13850 3f012b2e59fe30109edb68e9d379fac1 359 Gene3D G3DSA:3.10.20.30 252 353 4.7E-25 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 SUPERFAMILY SSF82866 290 490 3.4E-46 T 23-04-2016 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 Gene3D G3DSA:1.20.1640.10 284 499 1.0E-55 T 23-04-2016 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 SUPERFAMILY SSF82693 40 129 1.86E-21 T 23-04-2016 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.5E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.5E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.5E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.5E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.5E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.5E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.5E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 1.5E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.5E-79 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 Pfam PF00873 AcrB/AcrD/AcrF family 6 1012 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 SUPERFAMILY SSF82714 707 789 1.57E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 PANTHER PTHR32063 1 1034 0.0 T 23-04-2016 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 SUPERFAMILY SSF82714 183 267 3.01E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 Gene3D G3DSA:3.30.70.1430 559 647 7.6E-11 T 23-04-2016 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 SUPERFAMILY SSF82693 556 648 4.36E-15 T 23-04-2016 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 PANTHER PTHR32063:SF34 1 1034 0.0 T 23-04-2016 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 Gene3D G3DSA:3.30.70.1430 41 142 6.1E-27 T 23-04-2016 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 Gene3D G3DSA:3.30.2090.10 183 266 2.8E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 Gene3D G3DSA:3.30.2090.10 707 790 5.9E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 SUPERFAMILY SSF82866 793 1017 1.83E-41 T 23-04-2016 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 Gene3D G3DSA:1.10.3850.10 799 1014 8.0E-46 T 23-04-2016 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 SUPERFAMILY SSF82693 137 182 2.3E-20 T 23-04-2016 LT40_RS10930 f32494de4b64b1bd824e98bec39599af 1035 SUPERFAMILY SSF82693 268 324 2.3E-20 T 23-04-2016 LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 PANTHER PTHR30126:SF5 7 313 6.1E-127 T 23-04-2016 LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 Pfam PF03466 LysR substrate binding domain 94 298 3.0E-50 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 7.5E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 SUPERFAMILY SSF53850 96 302 2.67E-45 T 23-04-2016 LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 PANTHER PTHR30126 7 313 6.1E-127 T 23-04-2016 LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 SUPERFAMILY SSF46785 5 85 8.71E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 Gene3D G3DSA:3.40.190.10 97 181 1.3E-17 T 23-04-2016 LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 Gene3D G3DSA:1.10.10.10 8 94 3.7E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.1E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.1E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.1E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16270 095116bd01c6326a2d77e9f8bafaf819 320 Gene3D G3DSA:3.40.190.10 182 269 1.6E-24 T 23-04-2016 LT40_RS04805 097b69211d9cfc56fb31a148062f6a6b 270 Gene3D G3DSA:3.40.50.300 2 247 3.8E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04805 097b69211d9cfc56fb31a148062f6a6b 270 PANTHER PTHR13696 4 257 1.8E-89 T 23-04-2016 LT40_RS04805 097b69211d9cfc56fb31a148062f6a6b 270 PANTHER PTHR13696:SF1 4 257 1.8E-89 T 23-04-2016 LT40_RS04805 097b69211d9cfc56fb31a148062f6a6b 270 PIRSF PIRSF003092 1 270 8.1E-92 T 23-04-2016 IPR025501 ATP binding protein MinD LT40_RS04805 097b69211d9cfc56fb31a148062f6a6b 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 216 6.2E-27 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LT40_RS04805 097b69211d9cfc56fb31a148062f6a6b 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 267 6.9E-114 T 23-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 LT40_RS04805 097b69211d9cfc56fb31a148062f6a6b 270 SUPERFAMILY SSF52540 2 268 6.68E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01060 38dbd3c931a8322da06a5d82a8bf0c3e 258 SMART SM00062 25 254 1.4E-72 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS01060 38dbd3c931a8322da06a5d82a8bf0c3e 258 Gene3D G3DSA:3.40.190.10 213 256 1.7E-44 T 23-04-2016 LT40_RS01060 38dbd3c931a8322da06a5d82a8bf0c3e 258 Gene3D G3DSA:3.40.190.10 22 111 1.7E-44 T 23-04-2016 LT40_RS01060 38dbd3c931a8322da06a5d82a8bf0c3e 258 PANTHER PTHR18966:SF152 17 251 1.4E-65 T 23-04-2016 LT40_RS01060 38dbd3c931a8322da06a5d82a8bf0c3e 258 PANTHER PTHR18966 17 251 1.4E-65 T 23-04-2016 LT40_RS01060 38dbd3c931a8322da06a5d82a8bf0c3e 258 SUPERFAMILY SSF53850 1 255 1.09E-66 T 23-04-2016 LT40_RS01060 38dbd3c931a8322da06a5d82a8bf0c3e 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 252 7.5E-60 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS01060 38dbd3c931a8322da06a5d82a8bf0c3e 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 5 251 2.5E-87 T 23-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 LT40_RS01060 38dbd3c931a8322da06a5d82a8bf0c3e 258 Gene3D G3DSA:3.40.190.10 113 211 1.3E-24 T 23-04-2016 LT40_RS01420 40e0d97373e9768cbce04a97750070ef 493 Gene3D G3DSA:3.40.50.300 2 233 2.3E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01420 40e0d97373e9768cbce04a97750070ef 493 Gene3D G3DSA:3.40.50.300 246 480 3.2E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01420 40e0d97373e9768cbce04a97750070ef 493 SUPERFAMILY SSF52540 7 230 1.23E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01420 40e0d97373e9768cbce04a97750070ef 493 SUPERFAMILY SSF52540 249 467 9.22E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01420 40e0d97373e9768cbce04a97750070ef 493 SMART SM00382 268 429 0.2 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS01420 40e0d97373e9768cbce04a97750070ef 493 SMART SM00382 27 193 0.31 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS01420 40e0d97373e9768cbce04a97750070ef 493 PANTHER PTHR22942 168 464 6.8E-30 T 23-04-2016 LT40_RS01420 40e0d97373e9768cbce04a97750070ef 493 Pfam PF06745 KaiC 11 232 2.7E-28 T 23-04-2016 IPR014774 KaiC-like domain LT40_RS01420 40e0d97373e9768cbce04a97750070ef 493 Pfam PF06745 KaiC 253 465 3.3E-34 T 23-04-2016 IPR014774 KaiC-like domain LT40_RS01420 40e0d97373e9768cbce04a97750070ef 493 PIRSF PIRSF039117 1 490 3.5E-129 T 23-04-2016 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LT40_RS01420 40e0d97373e9768cbce04a97750070ef 493 PANTHER PTHR22942:SF43 168 464 6.8E-30 T 23-04-2016 LT40_RS03685 f5f604598e2eec73b722ea3b4e3cd618 481 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 480 38.855 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 LT40_RS03685 f5f604598e2eec73b722ea3b4e3cd618 481 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 479 3.4E-172 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 LT40_RS03685 f5f604598e2eec73b722ea3b4e3cd618 481 PANTHER PTHR11659 2 479 7.7E-252 T 23-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 LT40_RS03685 f5f604598e2eec73b722ea3b4e3cd618 481 PANTHER PTHR11659:SF0 2 479 7.7E-252 T 23-04-2016 LT40_RS03685 f5f604598e2eec73b722ea3b4e3cd618 481 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 144 158 - T 23-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 LT40_RS03685 f5f604598e2eec73b722ea3b4e3cd618 481 SUPERFAMILY SSF55931 4 296 8.5E-121 T 23-04-2016 LT40_RS03685 f5f604598e2eec73b722ea3b4e3cd618 481 Pfam PF02637 GatB domain 328 479 1.3E-53 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 LT40_RS03685 f5f604598e2eec73b722ea3b4e3cd618 481 SMART SM00845 328 479 2.5E-81 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 LT40_RS03685 f5f604598e2eec73b722ea3b4e3cd618 481 Pfam PF02934 GatB/GatE catalytic domain 5 289 1.9E-112 T 23-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 LT40_RS03685 f5f604598e2eec73b722ea3b4e3cd618 481 SUPERFAMILY SSF89095 297 402 1.26E-35 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 LT40_RS17580 fcc8582d02db944103edc0b63874a16b 97 Pfam PF05164 Cell division protein ZapA 11 91 1.2E-13 T 23-04-2016 IPR007838 Cell division protein ZapA-like LT40_RS17580 fcc8582d02db944103edc0b63874a16b 97 SUPERFAMILY SSF102829 11 93 8.89E-17 T 23-04-2016 IPR007838 Cell division protein ZapA-like LT40_RS10850 b2957697318070a7f4ed903248d357ad 344 SUPERFAMILY SSF56349 88 325 8.01E-76 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LT40_RS10850 b2957697318070a7f4ed903248d357ad 344 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 241 255 7.7E-9 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 LT40_RS10850 b2957697318070a7f4ed903248d357ad 344 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 291 302 7.7E-9 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 LT40_RS10850 b2957697318070a7f4ed903248d357ad 344 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 132 151 7.7E-9 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 LT40_RS10850 b2957697318070a7f4ed903248d357ad 344 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 176 192 7.7E-9 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 LT40_RS10850 b2957697318070a7f4ed903248d357ad 344 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 155 169 7.7E-9 T 23-04-2016 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 LT40_RS10850 b2957697318070a7f4ed903248d357ad 344 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 92 304 7.3E-34 T 23-04-2016 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 LT40_RS10850 b2957697318070a7f4ed903248d357ad 344 SUPERFAMILY SSF55869 32 93 1.83E-23 T 23-04-2016 LT40_RS10850 b2957697318070a7f4ed903248d357ad 344 Gene3D G3DSA:1.20.120.380 242 321 1.3E-27 T 23-04-2016 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 LT40_RS10850 b2957697318070a7f4ed903248d357ad 344 Gene3D G3DSA:3.90.15.10 97 227 4.1E-45 T 23-04-2016 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 LT40_RS05120 242614bcfb623d9b270f139ab875e82e 266 Gene3D G3DSA:1.10.3720.10 67 254 3.3E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05120 242614bcfb623d9b270f139ab875e82e 266 SUPERFAMILY SSF161098 63 248 2.75E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05120 242614bcfb623d9b270f139ab875e82e 266 PANTHER PTHR30151 11 263 3.6E-86 T 23-04-2016 LT40_RS05120 242614bcfb623d9b270f139ab875e82e 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 253 4.8E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05120 242614bcfb623d9b270f139ab875e82e 266 PANTHER PTHR30151:SF22 11 263 3.6E-86 T 23-04-2016 LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 15 361 1.5E-129 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 SUPERFAMILY SSF52518 370 552 2.32E-64 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 Gene3D G3DSA:3.40.50.920 564 688 7.5E-48 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 Gene3D G3DSA:3.40.50.970 357 556 2.7E-71 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 PANTHER PTHR11624:SF1 11 335 0.0 T 23-04-2016 LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 PANTHER PTHR11624:SF1 364 688 0.0 T 23-04-2016 LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 Pfam PF02779 Transketolase, pyrimidine binding domain 377 546 2.6E-37 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 SMART SM00861 378 550 8.3E-64 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 Pfam PF02780 Transketolase, C-terminal domain 566 680 8.8E-12 T 23-04-2016 IPR033248 Transketolase, C-terminal domain LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 SUPERFAMILY SSF52922 559 688 2.36E-43 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 TIGRFAM TIGR00232 tktlase_bact: transketolase 18 687 2.1E-253 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 SUPERFAMILY SSF52518 15 347 1.53E-100 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 Gene3D G3DSA:3.40.50.970 12 348 5.9E-116 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 ProSitePatterns PS00802 Transketolase signature 2. 492 508 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 PANTHER PTHR11624 11 335 0.0 T 23-04-2016 IPR033247 Transketolase family LT40_RS11000 7ad8de94382b55b090fee84d2b2bca36 689 PANTHER PTHR11624 364 688 0.0 T 23-04-2016 IPR033247 Transketolase family LT40_RS06615 fb75a724656f0a65a57d93957e518b49 277 PANTHER PTHR30522 1 273 6.2E-122 T 23-04-2016 LT40_RS06615 fb75a724656f0a65a57d93957e518b49 277 PANTHER PTHR30522:SF0 1 273 6.2E-122 T 23-04-2016 IPR011551 NTP pyrophosphohydrolase MazG LT40_RS06615 fb75a724656f0a65a57d93957e518b49 277 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 178 236 5.1E-9 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core LT40_RS06615 fb75a724656f0a65a57d93957e518b49 277 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 2.1E-25 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core LT40_RS06615 fb75a724656f0a65a57d93957e518b49 277 Gene3D G3DSA:1.10.287.1080 144 227 1.1E-13 T 23-04-2016 LT40_RS06615 fb75a724656f0a65a57d93957e518b49 277 Gene3D G3DSA:1.10.287.1080 19 71 6.9E-7 T 23-04-2016 LT40_RS06615 fb75a724656f0a65a57d93957e518b49 277 SUPERFAMILY SSF101386 1 103 1.03E-23 T 23-04-2016 LT40_RS06615 fb75a724656f0a65a57d93957e518b49 277 SUPERFAMILY SSF101386 148 245 3.93E-25 T 23-04-2016 LT40_RS06615 fb75a724656f0a65a57d93957e518b49 277 TIGRFAM TIGR00444 mazG: MazG family protein 10 267 3.3E-97 T 23-04-2016 IPR011551 NTP pyrophosphohydrolase MazG LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 16 376 1.8E-185 T 23-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 Pfam PF13353 4Fe-4S single cluster domain 28 110 6.3E-7 T 23-04-2016 LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 261 346 2.2E-7 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 Pfam PF13186 Iron-sulfur cluster-binding domain 254 319 8.4E-9 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 PIRSF PIRSF037420 7 368 2.5E-133 T 23-04-2016 IPR017200 Coenzyme PQQ synthesis protein E UniPathway: UPA00539 LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 SUPERFAMILY SSF102114 20 328 8.37E-75 T 23-04-2016 LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 386 195.735 T 23-04-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 UniPathway: UPA00539 LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 PANTHER PTHR11228:SF32 20 356 1.1E-113 T 23-04-2016 LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 Gene3D G3DSA:3.20.20.70 20 337 2.5E-68 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 27 38 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 SMART SM00729 21 224 5.9E-4 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 PANTHER PTHR11228 20 356 1.1E-113 T 23-04-2016 LT40_RS17840 63f12481960d7bb03b7820dce390934d 386 Pfam PF04055 Radical SAM superfamily 27 182 1.9E-21 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS06675 3ada4f26e76c56bde65ebb215c5db6ae 437 Gene3D G3DSA:2.120.10.30 62 435 8.6E-57 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS06675 3ada4f26e76c56bde65ebb215c5db6ae 437 Gene3D G3DSA:2.120.10.30 13 20 8.6E-57 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS06675 3ada4f26e76c56bde65ebb215c5db6ae 437 PANTHER PTHR19328 44 98 4.4E-162 T 23-04-2016 LT40_RS06675 3ada4f26e76c56bde65ebb215c5db6ae 437 PANTHER PTHR19328 129 436 4.4E-162 T 23-04-2016 LT40_RS06675 3ada4f26e76c56bde65ebb215c5db6ae 437 Pfam PF07995 Glucose / Sorbosone dehydrogenase 170 353 4.9E-14 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 LT40_RS06675 3ada4f26e76c56bde65ebb215c5db6ae 437 SUPERFAMILY SSF50952 125 435 6.02E-37 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 LT40_RS06675 3ada4f26e76c56bde65ebb215c5db6ae 437 SUPERFAMILY SSF50952 65 95 6.02E-37 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 LT40_RS06675 3ada4f26e76c56bde65ebb215c5db6ae 437 PANTHER PTHR19328:SF26 44 98 4.4E-162 T 23-04-2016 LT40_RS06675 3ada4f26e76c56bde65ebb215c5db6ae 437 PANTHER PTHR19328:SF26 129 436 4.4E-162 T 23-04-2016 LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 PANTHER PTHR30591 4 1158 1.2E-274 T 23-04-2016 LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 11 825 2.3E-277 T 23-04-2016 LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 11 1105 0.0 T 23-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 PIRSF PIRSF000980 10 1157 0.0 T 23-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 Gene3D G3DSA:3.40.50.300 674 772 9.0E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 Gene3D G3DSA:3.40.50.300 381 471 9.0E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 SUPERFAMILY SSF52980 840 1147 2.36E-68 T 23-04-2016 IPR011335 Restriction endonuclease type II-like LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 10 1150 13.42 T 23-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 SUPERFAMILY SSF52540 381 829 2.3E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 Gene3D G3DSA:1.10.10.160 105 207 3.4E-32 T 23-04-2016 IPR013986 DExx box DNA helicase domain LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 PANTHER PTHR30591:SF1 4 1158 1.2E-274 T 23-04-2016 LT40_RS13200 ece10f3d122df4dc6c89e9d35d7eb2a6 1159 SUPERFAMILY SSF52540 10 368 2.48E-101 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 SUPERFAMILY SSF81296 148 203 1.12E-8 T 23-04-2016 IPR014756 Immunoglobulin E-set LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 SUPERFAMILY SSF51011 638 741 1.98E-34 T 23-04-2016 LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 SUPERFAMILY SSF81296 26 123 1.64E-14 T 23-04-2016 IPR014756 Immunoglobulin E-set LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 SMART SM00642 274 611 1.7E-6 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 Gene3D G3DSA:2.60.40.1180 638 740 1.7E-39 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 Pfam PF00128 Alpha amylase, catalytic domain 290 361 2.2E-8 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 Gene3D G3DSA:3.20.20.80 255 626 1.4E-92 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 PANTHER PTHR10357:SF160 60 740 0.0 T 23-04-2016 LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 Gene3D G3DSA:2.60.40.10 122 230 1.9E-37 T 23-04-2016 IPR013783 Immunoglobulin-like fold LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 Gene3D G3DSA:2.60.40.10 25 111 1.7E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 118 739 1.6E-277 T 23-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 643 740 9.1E-25 T 23-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 110 741 44.645 T 23-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 134 216 7.2E-23 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 SUPERFAMILY SSF51445 189 631 1.68E-117 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 PANTHER PTHR10357 60 740 0.0 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11080 61d25014c77e6800d8140946b6bc4399 747 PIRSF PIRSF000463 17 747 5.5E-293 T 23-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 LT40_RS01740 14cf12b3b3e13c0a4c235f33ed7eb0a7 413 PANTHER PTHR30337:SF0 1 409 5.5E-92 T 23-04-2016 LT40_RS01740 14cf12b3b3e13c0a4c235f33ed7eb0a7 413 PANTHER PTHR30337 1 409 5.5E-92 T 23-04-2016 LT40_RS01740 14cf12b3b3e13c0a4c235f33ed7eb0a7 413 SUPERFAMILY SSF56300 1 348 3.8E-51 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS01740 14cf12b3b3e13c0a4c235f33ed7eb0a7 413 Pfam PF00149 Calcineurin-like phosphoesterase 1 232 2.6E-13 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LT40_RS01740 14cf12b3b3e13c0a4c235f33ed7eb0a7 413 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 257 1.6E-50 T 23-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 LT40_RS01740 14cf12b3b3e13c0a4c235f33ed7eb0a7 413 Gene3D G3DSA:3.60.21.10 1 280 2.8E-62 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS01740 14cf12b3b3e13c0a4c235f33ed7eb0a7 413 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 292 383 6.4E-13 T 23-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain LT40_RS03675 652a8c45b9e4ed79fed487336e325f51 341 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 296 4.1E-71 T 23-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 LT40_RS03675 652a8c45b9e4ed79fed487336e325f51 341 PANTHER PTHR10846 7 296 1.4E-55 T 23-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 LT40_RS03675 652a8c45b9e4ed79fed487336e325f51 341 Pfam PF01699 Sodium/calcium exchanger protein 1 137 5.0E-22 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 LT40_RS03675 652a8c45b9e4ed79fed487336e325f51 341 Pfam PF01699 Sodium/calcium exchanger protein 160 299 1.6E-31 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 LT40_RS19945 8ecfb7311bf474632c2a17451db4bcd6 60 PIRSF PIRSF037225 1 60 8.2E-27 T 23-04-2016 IPR017143 Uncharacterised conserved protein UCP037225 LT40_RS19945 8ecfb7311bf474632c2a17451db4bcd6 60 Pfam PF14255 Cysteine-rich CPXCG 7 56 2.3E-23 T 23-04-2016 IPR025990 Cysteine-rich CPXCG protein LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 PANTHER PTHR11472:SF32 57 712 0.0 T 23-04-2016 LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 PANTHER PTHR11472:SF32 1 40 0.0 T 23-04-2016 LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 PANTHER PTHR11472 57 712 0.0 T 23-04-2016 LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 PANTHER PTHR11472 1 40 0.0 T 23-04-2016 LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 SUPERFAMILY SSF52540 516 689 7.79E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 SUPERFAMILY SSF52540 210 286 7.79E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 SUPERFAMILY SSF52540 475 489 7.79E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 SUPERFAMILY SSF52540 57 105 7.79E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 SMART SM00491 562 695 4.4E-30 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 Gene3D G3DSA:3.40.50.300 227 268 4.1E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 Gene3D G3DSA:3.40.50.300 56 148 4.1E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 Gene3D G3DSA:3.40.50.300 301 331 4.1E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 Pfam PF13307 Helicase C-terminal domain 553 708 1.7E-33 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LT40_RS00825 249532acbe76bca7bcd8b6f8ce032f68 714 Gene3D G3DSA:3.40.50.300 539 690 3.6E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09780 1f717dd085817befa9a42d54cf7dbd77 224 Gene3D G3DSA:3.90.550.10 2 189 4.7E-19 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09780 1f717dd085817befa9a42d54cf7dbd77 224 SUPERFAMILY SSF53448 2 199 2.25E-26 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09780 1f717dd085817befa9a42d54cf7dbd77 224 Pfam PF00535 Glycosyl transferase family 2 4 131 7.6E-12 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS09780 1f717dd085817befa9a42d54cf7dbd77 224 PANTHER PTHR22916 1 187 1.4E-13 T 23-04-2016 LT40_RS11910 8d60388fcc63fcf479b146f0757c0965 116 PANTHER PTHR40455:SF1 6 115 1.6E-17 T 23-04-2016 LT40_RS11910 8d60388fcc63fcf479b146f0757c0965 116 Gene3D G3DSA:1.10.260.40 41 115 7.7E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS11910 8d60388fcc63fcf479b146f0757c0965 116 PANTHER PTHR40455 6 115 1.6E-17 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 Pfam PF00117 Glutamine amidotransferase class-I 4 191 1.9E-54 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PANTHER PTHR11922:SF7 1 198 3.9E-99 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 Gene3D G3DSA:3.40.50.880 2 192 2.0E-67 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 SUPERFAMILY SSF52317 1 192 2.47E-55 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PANTHER PTHR11922 1 198 3.9E-99 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.3E-36 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.3E-36 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.3E-36 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PRINTS PR00097 Anthranilate synthase component II signature 169 182 1.3E-36 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.3E-36 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.3E-36 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 191 1.6E-89 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.3E-13 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.3E-13 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.3E-13 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.2E-5 T 23-04-2016 LT40_RS18165 c5cbdee8e254b8b834b4fc36e49e1f23 199 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.2E-5 T 23-04-2016 LT40_RS17940 5fe13b21fb6edb160d35f8bae4a577a6 256 SUPERFAMILY SSF51197 16 228 1.92E-7 T 23-04-2016 LT40_RS15820 0e365aa648de78d6f36b27fb347f7b15 609 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 500 591 8.3E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS15820 0e365aa648de78d6f36b27fb347f7b15 609 SUPERFAMILY SSF55874 452 598 5.76E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS15820 0e365aa648de78d6f36b27fb347f7b15 609 Gene3D G3DSA:3.30.565.10 455 595 3.9E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS00265 753ac43ba33bc08fa598e918c7c6327b 230 SUPERFAMILY SSF46785 13 78 1.44E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00265 753ac43ba33bc08fa598e918c7c6327b 230 Gene3D G3DSA:1.20.120.530 77 212 2.9E-26 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS00265 753ac43ba33bc08fa598e918c7c6327b 230 SMART SM00895 84 207 1.4E-10 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS00265 753ac43ba33bc08fa598e918c7c6327b 230 SUPERFAMILY SSF48008 80 212 4.97E-22 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS00265 753ac43ba33bc08fa598e918c7c6327b 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 74 4.7E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS00265 753ac43ba33bc08fa598e918c7c6327b 230 Gene3D G3DSA:1.10.10.10 14 75 2.3E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00265 753ac43ba33bc08fa598e918c7c6327b 230 PANTHER PTHR11751 14 100 9.2E-13 T 23-04-2016 LT40_RS00265 753ac43ba33bc08fa598e918c7c6327b 230 Pfam PF07729 FCD domain 84 206 1.8E-17 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS00265 753ac43ba33bc08fa598e918c7c6327b 230 SMART SM00345 16 74 2.3E-4 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS11135 439e6d4fd41ee871ed83416ed1aeb6cb 218 Gene3D G3DSA:3.40.810.20 4 213 1.2E-89 T 23-04-2016 LT40_RS11135 439e6d4fd41ee871ed83416ed1aeb6cb 218 SUPERFAMILY SSF100950 4 216 7.99E-74 T 23-04-2016 LT40_RS11135 439e6d4fd41ee871ed83416ed1aeb6cb 218 Pfam PF01144 Coenzyme A transferase 6 201 8.9E-41 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 LT40_RS11135 439e6d4fd41ee871ed83416ed1aeb6cb 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 1.2E-99 T 23-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 LT40_RS11135 439e6d4fd41ee871ed83416ed1aeb6cb 218 PANTHER PTHR13707 2 218 6.9E-116 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 LT40_RS11135 439e6d4fd41ee871ed83416ed1aeb6cb 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 23-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 LT40_RS11135 439e6d4fd41ee871ed83416ed1aeb6cb 218 SMART SM00882 6 202 2.1E-70 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 SUPERFAMILY SSF81593 197 313 3.92E-10 T 23-04-2016 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 Pfam PF01909 Nucleotidyltransferase domain 74 111 6.0E-8 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 PIRSF PIRSF006288 12 892 0.0 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 Pfam PF08335 GlnD PII-uridylyltransferase 185 322 1.5E-35 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 SUPERFAMILY SSF55021 814 879 1.15E-9 T 23-04-2016 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 Pfam PF01966 HD domain 484 571 1.6E-10 T 23-04-2016 IPR006674 HD domain LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 Gene3D G3DSA:3.30.460.10 76 172 5.9E-14 T 23-04-2016 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 SMART SM00471 457 604 6.7E-10 T 23-04-2016 IPR003607 HD/PDEase domain LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 38 885 0.0 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 PANTHER PTHR13734:SF45 104 698 3.4E-128 T 23-04-2016 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 Gene3D G3DSA:1.10.3210.10 431 620 3.5E-23 T 23-04-2016 IPR006674 HD domain LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 SUPERFAMILY SSF81301 8 181 6.22E-25 T 23-04-2016 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 PANTHER PTHR13734 104 698 3.4E-128 T 23-04-2016 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 SUPERFAMILY SSF55021 702 773 9.16E-5 T 23-04-2016 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 Gene3D G3DSA:3.30.70.260 815 878 7.3E-9 T 23-04-2016 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 SUPERFAMILY SSF109604 426 591 6.91E-14 T 23-04-2016 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 Pfam PF01842 ACT domain 815 867 4.7E-7 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LT40_RS00400 6ab10e2c1ca9fae315138fa17b1d8012 900 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 897 340.728 T 23-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 LT40_RS10785 4db292ca9b0fe5c78fae338a198d10fc 119 PANTHER PTHR38780:SF1 2 119 1.8E-43 T 23-04-2016 LT40_RS10785 4db292ca9b0fe5c78fae338a198d10fc 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 5 118 1.4E-36 T 23-04-2016 IPR017462 Sulphur relay, TusC/DsrF LT40_RS10785 4db292ca9b0fe5c78fae338a198d10fc 119 Gene3D G3DSA:3.40.1260.10 1 118 2.6E-38 T 23-04-2016 IPR027396 DsrEFH-like LT40_RS10785 4db292ca9b0fe5c78fae338a198d10fc 119 PANTHER PTHR38780 2 119 1.8E-43 T 23-04-2016 LT40_RS10785 4db292ca9b0fe5c78fae338a198d10fc 119 Pfam PF02635 DsrE/DsrF-like family 3 118 6.5E-21 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein LT40_RS10785 4db292ca9b0fe5c78fae338a198d10fc 119 SUPERFAMILY SSF75169 3 118 1.85E-32 T 23-04-2016 IPR027396 DsrEFH-like LT40_RS20355 4aa5985c20d06e424f3a64f04d000c77 250 Gene3D G3DSA:3.40.1280.10 4 163 1.2E-66 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LT40_RS20355 4aa5985c20d06e424f3a64f04d000c77 250 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 26 223 1.2E-62 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LT40_RS20355 4aa5985c20d06e424f3a64f04d000c77 250 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 250 114.733 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LT40_RS20355 4aa5985c20d06e424f3a64f04d000c77 250 PIRSF PIRSF000386 4 248 2.2E-97 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LT40_RS20355 4aa5985c20d06e424f3a64f04d000c77 250 PANTHER PTHR32125:SF1 1 231 1.9E-114 T 23-04-2016 LT40_RS20355 4aa5985c20d06e424f3a64f04d000c77 250 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 5 237 6.8E-98 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LT40_RS20355 4aa5985c20d06e424f3a64f04d000c77 250 Gene3D G3DSA:1.10.1270.20 164 246 1.9E-34 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LT40_RS20355 4aa5985c20d06e424f3a64f04d000c77 250 SUPERFAMILY SSF75217 4 247 2.09E-99 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases LT40_RS20355 4aa5985c20d06e424f3a64f04d000c77 250 PANTHER PTHR32125 1 231 1.9E-114 T 23-04-2016 LT40_RS18685 fa307a5dc1c4f1518366230572d3187c 250 Gene3D G3DSA:3.40.50.300 3 246 4.6E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18685 fa307a5dc1c4f1518366230572d3187c 250 PIRSF PIRSF039085 1 250 6.0E-114 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS18685 fa307a5dc1c4f1518366230572d3187c 250 SMART SM00382 28 223 2.3E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS18685 fa307a5dc1c4f1518366230572d3187c 250 Pfam PF00005 ABC transporter 19 175 2.7E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS18685 fa307a5dc1c4f1518366230572d3187c 250 SUPERFAMILY SSF52540 4 245 1.21E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18685 fa307a5dc1c4f1518366230572d3187c 250 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS18685 fa307a5dc1c4f1518366230572d3187c 250 PANTHER PTHR24220 5 247 3.7E-126 T 23-04-2016 LT40_RS18685 fa307a5dc1c4f1518366230572d3187c 250 PANTHER PTHR24220:SF327 5 247 3.7E-126 T 23-04-2016 LT40_RS18620 19fbd7c0c0de541d7d26489c92bdb6b4 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LT40_RS18620 19fbd7c0c0de541d7d26489c92bdb6b4 295 SUPERFAMILY SSF48576 5 288 2.88E-83 T 23-04-2016 IPR008949 Isoprenoid synthase domain LT40_RS18620 19fbd7c0c0de541d7d26489c92bdb6b4 295 PANTHER PTHR12001 10 295 4.1E-99 T 23-04-2016 IPR017446 Polyprenyl synthetase-related LT40_RS18620 19fbd7c0c0de541d7d26489c92bdb6b4 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LT40_RS18620 19fbd7c0c0de541d7d26489c92bdb6b4 295 Pfam PF00348 Polyprenyl synthetase 30 258 4.1E-56 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LT40_RS18620 19fbd7c0c0de541d7d26489c92bdb6b4 295 Gene3D G3DSA:1.10.600.10 10 293 9.9E-90 T 23-04-2016 IPR008949 Isoprenoid synthase domain LT40_RS18620 19fbd7c0c0de541d7d26489c92bdb6b4 295 PANTHER PTHR12001:SF23 10 295 4.1E-99 T 23-04-2016 LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 Pfam PF00005 ABC transporter 25 183 2.0E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 Pfam PF00005 ABC transporter 303 454 7.4E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 PANTHER PTHR24220 6 412 6.0E-134 T 23-04-2016 LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 PANTHER PTHR24220:SF586 6 412 6.0E-134 T 23-04-2016 LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 278 1.4E-5 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 507 536 7.7E-4 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 SUPERFAMILY SSF52540 4 254 3.12E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 SMART SM00382 312 504 5.6E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 SMART SM00382 33 232 1.1E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 SUPERFAMILY SSF52540 279 526 4.93E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 Gene3D G3DSA:3.40.50.300 3 256 1.3E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05095 e0cf5ca8dc85af272a76328dafc48fcf 539 Gene3D G3DSA:3.40.50.300 277 528 2.0E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 PANTHER PTHR30081 3 302 2.9E-83 T 23-04-2016 LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 33 276 1.7E-80 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 5 287 27.88 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 PRINTS PR01755 Bacterial translocase SecF protein signature 144 158 9.9E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 PRINTS PR01755 Bacterial translocase SecF protein signature 192 210 9.9E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 PRINTS PR01755 Bacterial translocase SecF protein signature 32 47 9.9E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 PRINTS PR01755 Bacterial translocase SecF protein signature 224 239 9.9E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 Gene3D G3DSA:1.20.1640.10 95 283 4.5E-26 T 23-04-2016 LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 Pfam PF07549 SecD/SecF GG Motif 27 54 1.1E-12 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 Pfam PF02355 Protein export membrane protein 109 284 1.5E-64 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 90 273 1.1E-56 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LT40_RS03415 3e01fed63b9eae348108e6c07b5c5c46 303 SUPERFAMILY SSF82866 82 283 6.93E-38 T 23-04-2016 LT40_RS02640 9b299f0b9dc9b9bd501bab3dcc18221b 201 PANTHER PTHR30055:SF53 1 163 2.4E-58 T 23-04-2016 LT40_RS02640 9b299f0b9dc9b9bd501bab3dcc18221b 201 PANTHER PTHR30055 1 163 2.4E-58 T 23-04-2016 LT40_RS02640 9b299f0b9dc9b9bd501bab3dcc18221b 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.2E-16 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS02640 9b299f0b9dc9b9bd501bab3dcc18221b 201 Pfam PF08362 YcdC-like protein, C-terminal region 59 200 1.7E-59 T 23-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 LT40_RS02640 9b299f0b9dc9b9bd501bab3dcc18221b 201 SUPERFAMILY SSF48498 77 200 8.9E-41 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LT40_RS02640 9b299f0b9dc9b9bd501bab3dcc18221b 201 Gene3D G3DSA:1.10.10.60 5 40 3.2E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS02640 9b299f0b9dc9b9bd501bab3dcc18221b 201 Gene3D G3DSA:1.10.357.10 63 200 5.2E-54 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS02640 9b299f0b9dc9b9bd501bab3dcc18221b 201 Gene3D G3DSA:1.10.10.60 41 62 1.5E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS02640 9b299f0b9dc9b9bd501bab3dcc18221b 201 SUPERFAMILY SSF46689 4 71 4.16E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS02640 9b299f0b9dc9b9bd501bab3dcc18221b 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.5E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS02640 9b299f0b9dc9b9bd501bab3dcc18221b 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.5E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Pfam PF01568 Molydopterin dinucleotide binding domain 566 674 4.4E-33 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 SUPERFAMILY SSF53706 2 559 9.29E-169 T 23-04-2016 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Gene3D G3DSA:2.20.25.90 1 40 3.7E-10 T 23-04-2016 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 SUPERFAMILY SSF63380 871 1090 8.17E-60 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Pfam PF00667 FAD binding domain 875 1069 3.7E-37 T 23-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Gene3D G3DSA:3.40.50.80 1100 1243 1.5E-57 T 23-04-2016 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Gene3D G3DSA:3.40.50.740 302 548 1.2E-72 T 23-04-2016 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Gene3D G3DSA:3.40.50.740 41 117 1.2E-72 T 23-04-2016 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Pfam PF00384 Molybdopterin oxidoreductase 60 467 1.4E-64 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Gene3D G3DSA:3.40.228.10 118 301 3.3E-62 T 23-04-2016 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1169 1185 6.8E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1100 1119 6.8E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 912 922 6.8E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1125 1134 6.8E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1031 1038 6.8E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1138 1149 6.8E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1192 1200 6.8E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1064 1073 6.8E-27 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Gene3D G3DSA:3.40.50.360 705 846 2.2E-38 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00369 Flavodoxin signature 710 723 4.5E-12 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00369 Flavodoxin signature 790 800 4.5E-12 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00369 Flavodoxin signature 814 833 4.5E-12 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PRINTS PR00369 Flavodoxin signature 758 769 4.5E-12 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Gene3D G3DSA:2.40.40.20 556 682 1.6E-42 T 23-04-2016 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 SUPERFAMILY SSF50692 537 681 1.15E-45 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 PANTHER PTHR19384 711 1243 1.9E-187 T 23-04-2016 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Pfam PF00175 Oxidoreductase NAD-binding domain 1101 1207 2.3E-18 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 SUPERFAMILY SSF52343 1089 1243 1.83E-49 T 23-04-2016 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 604 631 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 SUPERFAMILY SSF52218 708 846 2.19E-39 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Gene3D G3DSA:2.40.30.10 1029 1099 4.4E-38 T 23-04-2016 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Gene3D G3DSA:2.40.30.10 873 922 4.4E-38 T 23-04-2016 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Pfam PF00258 Flavodoxin 711 836 3.0E-27 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 34 1.7E-8 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 LT40_RS05675 33c29c5b5c682cd0930e08d9e5de0700 1243 Gene3D G3DSA:1.20.990.10 923 1028 7.1E-26 T 23-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 SMART SM00846 3 154 8.1E-93 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 154 6.5E-59 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 Gene3D G3DSA:3.40.50.720 1 162 1.9E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 PANTHER PTHR10836:SF50 1 324 9.6E-196 T 23-04-2016 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 7.1E-37 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 7.1E-37 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 7.1E-37 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 7.1E-37 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 7.1E-37 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 312 7.0E-61 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.3E-129 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 PANTHER PTHR10836 1 324 9.6E-196 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 Gene3D G3DSA:3.30.360.10 163 314 5.9E-71 T 23-04-2016 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 PIRSF PIRSF000149 1 333 8.1E-135 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 152 159 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 SUPERFAMILY SSF51735 1 179 9.37E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS03205 7541b606d968d0b1f2a05764f61c1555 333 SUPERFAMILY SSF55347 154 313 5.06E-67 T 23-04-2016 LT40_RS15895 a92609701447f0d0f8f9180cdbe72e9a 298 PANTHER PTHR30537:SF16 1 297 3.2E-117 T 23-04-2016 LT40_RS15895 a92609701447f0d0f8f9180cdbe72e9a 298 Pfam PF03466 LysR substrate binding domain 92 293 1.1E-18 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS15895 a92609701447f0d0f8f9180cdbe72e9a 298 PANTHER PTHR30537 1 297 3.2E-117 T 23-04-2016 LT40_RS15895 a92609701447f0d0f8f9180cdbe72e9a 298 SUPERFAMILY SSF46785 4 85 2.9E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15895 a92609701447f0d0f8f9180cdbe72e9a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.4E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15895 a92609701447f0d0f8f9180cdbe72e9a 298 Gene3D G3DSA:1.10.10.10 2 86 8.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15895 a92609701447f0d0f8f9180cdbe72e9a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15895 a92609701447f0d0f8f9180cdbe72e9a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15895 a92609701447f0d0f8f9180cdbe72e9a 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.2E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15895 a92609701447f0d0f8f9180cdbe72e9a 298 Gene3D G3DSA:3.40.190.10 164 263 2.2E-30 T 23-04-2016 LT40_RS15895 a92609701447f0d0f8f9180cdbe72e9a 298 SUPERFAMILY SSF53850 95 296 1.05E-22 T 23-04-2016 LT40_RS07100 d0f9626e8dfccb26086a15a13fca1147 453 PANTHER PTHR16943:SF8 16 452 5.0E-45 T 23-04-2016 LT40_RS07100 d0f9626e8dfccb26086a15a13fca1147 453 Pfam PF03972 MmgE/PrpD family 3 430 7.4E-73 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 LT40_RS07100 d0f9626e8dfccb26086a15a13fca1147 453 Gene3D G3DSA:3.30.1330.120 257 393 1.2E-15 T 23-04-2016 LT40_RS07100 d0f9626e8dfccb26086a15a13fca1147 453 PANTHER PTHR16943 16 452 5.0E-45 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 LT40_RS07100 d0f9626e8dfccb26086a15a13fca1147 453 SUPERFAMILY SSF103378 3 429 7.32E-82 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 LT40_RS18780 fc111236d3eaaeb482855296ea18fbc1 223 PANTHER PTHR10429:SF0 1 217 3.1E-46 T 23-04-2016 LT40_RS18780 fc111236d3eaaeb482855296ea18fbc1 223 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 7 201 23.084 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 LT40_RS18780 fc111236d3eaaeb482855296ea18fbc1 223 PANTHER PTHR10429 1 217 3.1E-46 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 LT40_RS18780 fc111236d3eaaeb482855296ea18fbc1 223 Gene3D G3DSA:3.10.300.10 3 208 1.7E-41 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 LT40_RS18780 fc111236d3eaaeb482855296ea18fbc1 223 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 9 196 7.9E-34 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 LT40_RS18780 fc111236d3eaaeb482855296ea18fbc1 223 SUPERFAMILY SSF50486 2 208 2.67E-52 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 LT40_RS01775 b4fc951d463950a06cdaf0c02627606e 305 Gene3D G3DSA:3.40.50.300 18 181 7.1E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01775 b4fc951d463950a06cdaf0c02627606e 305 PANTHER PTHR11603:SF155 1 303 7.4E-180 T 23-04-2016 LT40_RS01775 b4fc951d463950a06cdaf0c02627606e 305 Gene3D G3DSA:1.10.8.300 196 296 8.4E-31 T 23-04-2016 LT40_RS01775 b4fc951d463950a06cdaf0c02627606e 305 PANTHER PTHR11603 1 303 7.4E-180 T 23-04-2016 LT40_RS01775 b4fc951d463950a06cdaf0c02627606e 305 SUPERFAMILY SSF52540 9 281 1.25E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01775 b4fc951d463950a06cdaf0c02627606e 305 PIRSF PIRSF002849 1 304 3.2E-120 T 23-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted LT40_RS01775 b4fc951d463950a06cdaf0c02627606e 305 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 6.5E-62 T 23-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 LT40_RS13435 e5d53f2192f28129ab1ab5f4f03b665b 648 PANTHER PTHR32089:SF64 289 648 7.3E-89 T 23-04-2016 LT40_RS13435 e5d53f2192f28129ab1ab5f4f03b665b 648 Gene3D G3DSA:1.10.287.950 401 613 6.7E-50 T 23-04-2016 LT40_RS13435 e5d53f2192f28129ab1ab5f4f03b665b 648 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 451 646 5.5E-42 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS13435 e5d53f2192f28129ab1ab5f4f03b665b 648 SUPERFAMILY SSF58104 347 648 2.75E-61 T 23-04-2016 LT40_RS13435 e5d53f2192f28129ab1ab5f4f03b665b 648 PANTHER PTHR32089 289 648 7.3E-89 T 23-04-2016 LT40_RS13435 e5d53f2192f28129ab1ab5f4f03b665b 648 SMART SM00283 386 647 7.8E-51 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS04985 2e291ccb9aa3f19bd86bd5fef7e290fa 167 SUPERFAMILY SSF103088 60 166 1.44E-34 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS04985 2e291ccb9aa3f19bd86bd5fef7e290fa 167 PANTHER PTHR30128 51 165 6.1E-52 T 23-04-2016 LT40_RS04985 2e291ccb9aa3f19bd86bd5fef7e290fa 167 PRINTS PR01021 OMPA domain signature 112 128 9.3E-20 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS04985 2e291ccb9aa3f19bd86bd5fef7e290fa 167 PRINTS PR01021 OMPA domain signature 97 112 9.3E-20 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS04985 2e291ccb9aa3f19bd86bd5fef7e290fa 167 PRINTS PR01021 OMPA domain signature 68 90 9.3E-20 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS04985 2e291ccb9aa3f19bd86bd5fef7e290fa 167 Pfam PF00691 OmpA family 67 161 4.9E-24 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS04985 2e291ccb9aa3f19bd86bd5fef7e290fa 167 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 66 165 9.0E-42 T 23-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 LT40_RS04985 2e291ccb9aa3f19bd86bd5fef7e290fa 167 ProSitePatterns PS01068 OmpA-like domain. 99 143 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 LT40_RS04985 2e291ccb9aa3f19bd86bd5fef7e290fa 167 Gene3D G3DSA:3.30.1330.60 58 166 1.7E-35 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS04985 2e291ccb9aa3f19bd86bd5fef7e290fa 167 PANTHER PTHR30128:SF18 51 165 6.1E-52 T 23-04-2016 LT40_RS10235 1a580b6380fd32fd1e70c41abef44869 169 PANTHER PTHR38593 28 167 2.9E-33 T 23-04-2016 LT40_RS10235 1a580b6380fd32fd1e70c41abef44869 169 Gene3D G3DSA:1.20.1260.10 26 159 1.7E-6 T 23-04-2016 IPR012347 Ferritin-related LT40_RS10235 1a580b6380fd32fd1e70c41abef44869 169 Pfam PF13628 Domain of unknown function (DUF4142) 25 159 2.7E-42 T 23-04-2016 IPR025419 Domain of unknown function DUF4142 LT40_RS10235 1a580b6380fd32fd1e70c41abef44869 169 PANTHER PTHR38593:SF2 28 167 2.9E-33 T 23-04-2016 LT40_RS08130 3d5525c06af32b5290d87329997519a3 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 13 184 9.1E-24 T 23-04-2016 IPR024478 4HB MCP domain LT40_RS08130 3d5525c06af32b5290d87329997519a3 541 SMART SM00283 279 540 1.5E-75 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS08130 3d5525c06af32b5290d87329997519a3 541 PANTHER PTHR32089 1 541 7.0E-114 T 23-04-2016 LT40_RS08130 3d5525c06af32b5290d87329997519a3 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 7.4E-23 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS08130 3d5525c06af32b5290d87329997519a3 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 13 38 7.4E-23 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS08130 3d5525c06af32b5290d87329997519a3 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 7.4E-23 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS08130 3d5525c06af32b5290d87329997519a3 541 Pfam PF00672 HAMP domain 193 261 1.4E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS08130 3d5525c06af32b5290d87329997519a3 541 SMART SM00304 212 264 5.4E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS08130 3d5525c06af32b5290d87329997519a3 541 Gene3D G3DSA:1.10.287.950 294 508 1.8E-56 T 23-04-2016 LT40_RS08130 3d5525c06af32b5290d87329997519a3 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 539 2.6E-45 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS08130 3d5525c06af32b5290d87329997519a3 541 SUPERFAMILY SSF58104 232 540 7.98E-72 T 23-04-2016 LT40_RS02165 a5a0f7a33c6024add3f54e2f9254ba18 256 Pfam PF08241 Methyltransferase domain 81 131 2.3E-4 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LT40_RS02165 a5a0f7a33c6024add3f54e2f9254ba18 256 SUPERFAMILY SSF53335 87 177 2.33E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS02165 a5a0f7a33c6024add3f54e2f9254ba18 256 Gene3D G3DSA:3.40.50.150 88 218 2.8E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 SMART SM00382 48 330 4.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 Gene3D G3DSA:1.10.8.10 211 241 1.1E-29 T 23-04-2016 LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 Gene3D G3DSA:1.10.8.10 110 175 1.1E-29 T 23-04-2016 LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 Gene3D G3DSA:3.40.50.300 243 329 5.2E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 Gene3D G3DSA:3.40.50.300 3 109 5.2E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 139 4.8E-8 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 445 8.7E-212 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 SUPERFAMILY SSF52540 3 443 1.03E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 445 42.086 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 Gene3D G3DSA:1.10.8.60 333 445 5.6E-29 T 23-04-2016 LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 PANTHER PTHR11262:SF3 3 104 3.7E-203 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 PANTHER PTHR11262:SF3 216 445 3.7E-203 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 Pfam PF07724 AAA domain (Cdc48 subfamily) 170 327 6.9E-40 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 PANTHER PTHR11262 3 104 3.7E-203 T 23-04-2016 LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 PANTHER PTHR11262 216 445 3.7E-203 T 23-04-2016 LT40_RS14285 042743c33a23a2f20b494dce154bc443 445 SMART SM01086 333 431 2.2E-12 T 23-04-2016 IPR019489 Clp ATPase, C-terminal LT40_RS20155 6146a8e31e1373430a066295c09b7b5f 324 SUPERFAMILY SSF52283 1 133 6.24E-29 T 23-04-2016 LT40_RS20155 6146a8e31e1373430a066295c09b7b5f 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LT40_RS20155 6146a8e31e1373430a066295c09b7b5f 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 9.6E-27 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LT40_RS20155 6146a8e31e1373430a066295c09b7b5f 324 PANTHER PTHR10996 1 320 1.0E-131 T 23-04-2016 LT40_RS20155 6146a8e31e1373430a066295c09b7b5f 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 286 1.1E-59 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LT40_RS20155 6146a8e31e1373430a066295c09b7b5f 324 SUPERFAMILY SSF51735 100 287 2.82E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS20155 6146a8e31e1373430a066295c09b7b5f 324 Gene3D G3DSA:3.40.50.720 114 289 1.0E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS20155 6146a8e31e1373430a066295c09b7b5f 324 Gene3D G3DSA:3.40.50.720 3 113 4.2E-30 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS20155 6146a8e31e1373430a066295c09b7b5f 324 PANTHER PTHR10996:SF118 1 320 1.0E-131 T 23-04-2016 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 SUPERFAMILY SSF54373 175 275 2.0E-46 T 23-04-2016 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 Gene3D G3DSA:3.30.9.10 138 299 6.0E-70 T 23-04-2016 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 PANTHER PTHR13789:SF192 1 394 5.3E-213 T 23-04-2016 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 PANTHER PTHR13789 1 394 5.3E-213 T 23-04-2016 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 Gene3D G3DSA:3.50.50.60 1 79 2.1E-6 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 1.7E-32 T 23-04-2016 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 1.7E-32 T 23-04-2016 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 328 1.7E-32 T 23-04-2016 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 1.7E-32 T 23-04-2016 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.7E-32 T 23-04-2016 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 390 5.2E-214 T 23-04-2016 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 Pfam PF01494 FAD binding domain 2 343 8.1E-92 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 SUPERFAMILY SSF51905 1 172 3.46E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS01430 f8e300c7a8a14e45c1099c69a43a10da 394 SUPERFAMILY SSF51905 274 390 3.46E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16715 5296a56b34e9803ac2db0b6c168d3030 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 291 35.241 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD LT40_RS16715 5296a56b34e9803ac2db0b6c168d3030 298 PANTHER PTHR30349:SF17 1 294 2.3E-134 T 23-04-2016 LT40_RS16715 5296a56b34e9803ac2db0b6c168d3030 298 Gene3D G3DSA:1.10.443.10 111 284 9.2E-50 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS16715 5296a56b34e9803ac2db0b6c168d3030 298 PANTHER PTHR30349 1 294 2.3E-134 T 23-04-2016 LT40_RS16715 5296a56b34e9803ac2db0b6c168d3030 298 Pfam PF00589 Phage integrase family 111 277 9.8E-43 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS16715 5296a56b34e9803ac2db0b6c168d3030 298 SUPERFAMILY SSF56349 104 289 1.09E-50 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LT40_RS16715 5296a56b34e9803ac2db0b6c168d3030 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 5.9E-22 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LT40_RS16715 5296a56b34e9803ac2db0b6c168d3030 298 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 293 2.9E-107 T 23-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 LT40_RS16715 5296a56b34e9803ac2db0b6c168d3030 298 Gene3D G3DSA:1.10.150.130 3 97 1.1E-28 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal LT40_RS16715 5296a56b34e9803ac2db0b6c168d3030 298 SUPERFAMILY SSF47823 4 96 3.14E-19 T 23-04-2016 IPR010998 Integrase, Lambda-type, N-terminal LT40_RS14655 63718e32339e71aacf167be72e881aaf 123 PANTHER PTHR10584 5 66 3.8E-19 T 23-04-2016 LT40_RS14655 63718e32339e71aacf167be72e881aaf 123 Pfam PF04241 Protein of unknown function (DUF423) 19 105 2.1E-30 T 23-04-2016 IPR006696 Protein of unknown function DUF423 LT40_RS14655 63718e32339e71aacf167be72e881aaf 123 PANTHER PTHR10584:SF191 5 66 3.8E-19 T 23-04-2016 LT40_RS12350 dcdd1fe62fca476954da4712b0e6f12b 139 SMART SM00448 16 127 5.7E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS12350 dcdd1fe62fca476954da4712b0e6f12b 139 PANTHER PTHR26402 18 103 2.3E-20 T 23-04-2016 LT40_RS12350 dcdd1fe62fca476954da4712b0e6f12b 139 Gene3D G3DSA:3.40.50.2300 16 133 3.3E-26 T 23-04-2016 LT40_RS12350 dcdd1fe62fca476954da4712b0e6f12b 139 SUPERFAMILY SSF52172 18 132 1.99E-23 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS12350 dcdd1fe62fca476954da4712b0e6f12b 139 Pfam PF00072 Response regulator receiver domain 18 123 9.7E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS19120 901d839c74f7db91998fb1bf01a29916 444 PANTHER PTHR24031:SF0 1 372 5.3E-185 T 23-04-2016 LT40_RS19120 901d839c74f7db91998fb1bf01a29916 444 Pfam PF00271 Helicase conserved C-terminal domain 231 339 2.5E-27 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS19120 901d839c74f7db91998fb1bf01a29916 444 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LT40_RS19120 901d839c74f7db91998fb1bf01a29916 444 Pfam PF00270 DEAD/DEAH box helicase 25 192 2.8E-48 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS19120 901d839c74f7db91998fb1bf01a29916 444 Gene3D G3DSA:3.40.50.300 219 373 4.8E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19120 901d839c74f7db91998fb1bf01a29916 444 PANTHER PTHR24031 1 372 5.3E-185 T 23-04-2016 LT40_RS19120 901d839c74f7db91998fb1bf01a29916 444 SMART SM00487 20 222 1.2E-61 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS19120 901d839c74f7db91998fb1bf01a29916 444 SMART SM00490 258 339 1.1E-32 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS19120 901d839c74f7db91998fb1bf01a29916 444 SUPERFAMILY SSF52540 74 359 6.57E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19120 901d839c74f7db91998fb1bf01a29916 444 Gene3D G3DSA:3.40.50.300 1 218 6.0E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 Pfam PF00270 DEAD/DEAH box helicase 604 764 8.5E-19 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 25 1109 28.844 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 SMART SM00490 825 909 6.1E-16 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 147 1080 0.0 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 SUPERFAMILY SSF143517 993 1145 2.09E-42 T 23-04-2016 LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 SUPERFAMILY SSF52540 351 465 4.76E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 Gene3D G3DSA:3.30.2060.10 130 207 2.5E-14 T 23-04-2016 LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 SMART SM00487 599 789 4.7E-34 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 SMART SM01058 478 575 7.9E-50 T 23-04-2016 IPR003711 CarD-like/TRCF domain LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 SUPERFAMILY SSF52540 781 988 2.59E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 SMART SM00982 1007 1107 7.1E-51 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 Pfam PF02559 CarD-like/TRCF domain 479 574 4.8E-24 T 23-04-2016 IPR003711 CarD-like/TRCF domain LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 Gene3D G3DSA:3.40.50.300 594 785 7.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 SUPERFAMILY SSF52540 11 340 1.08E-105 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 SUPERFAMILY SSF141259 469 547 2.75E-23 T 23-04-2016 IPR003711 CarD-like/TRCF domain LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 PANTHER PTHR14025:SF21 382 1144 0.0 T 23-04-2016 LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 Pfam PF00271 Helicase conserved C-terminal domain 804 908 3.9E-17 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 PANTHER PTHR14025 382 1144 0.0 T 23-04-2016 LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 Pfam PF03461 TRCF domain 1008 1099 6.2E-26 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 SUPERFAMILY SSF52540 522 782 8.69E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07380 0589f865a750568013a051f2d6c31f95 1149 Gene3D G3DSA:3.40.50.300 799 955 1.2E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 SUPERFAMILY SSF50341 16 157 1.83E-38 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 SMART SM00448 179 300 5.1E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 SMART SM00260 17 153 5.7E-23 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 PANTHER PTHR22617 1 169 2.4E-77 T 23-04-2016 LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 Gene3D G3DSA:2.30.30.40 95 144 3.2E-4 T 23-04-2016 LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 Pfam PF01584 CheW-like domain 21 155 4.7E-37 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 PIRSF PIRSF002867 1 308 2.6E-106 T 23-04-2016 IPR024181 Chemotaxis response regulator CheV LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 Pfam PF00072 Response regulator receiver domain 181 300 4.8E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 Gene3D G3DSA:3.40.50.2300 177 306 1.7E-25 T 23-04-2016 LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 PANTHER PTHR22617:SF30 1 169 2.4E-77 T 23-04-2016 LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 SUPERFAMILY SSF52172 177 306 9.96E-23 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS07245 9fed02cfe59d09a3ba6c24d39c8d44ac 309 Gene3D G3DSA:2.40.50.180 61 94 1.2E-5 T 23-04-2016 LT40_RS13000 b4e992e99ae8a7c5ecd510e26eb1bf5d 103 Gene3D G3DSA:3.10.20.280 3 92 2.3E-30 T 23-04-2016 IPR005346 RnfH protein LT40_RS13000 b4e992e99ae8a7c5ecd510e26eb1bf5d 103 Pfam PF03658 RnfH family Ubiquitin 6 90 9.0E-30 T 23-04-2016 IPR005346 RnfH protein LT40_RS13000 b4e992e99ae8a7c5ecd510e26eb1bf5d 103 PANTHER PTHR37483:SF1 3 103 2.5E-32 T 23-04-2016 LT40_RS13000 b4e992e99ae8a7c5ecd510e26eb1bf5d 103 PANTHER PTHR37483 3 103 2.5E-32 T 23-04-2016 LT40_RS13000 b4e992e99ae8a7c5ecd510e26eb1bf5d 103 Hamap MF_00460 Protein RnfH [rnfH]. 6 98 23.014 T 23-04-2016 IPR005346 RnfH protein LT40_RS13000 b4e992e99ae8a7c5ecd510e26eb1bf5d 103 SUPERFAMILY SSF54285 5 82 2.62E-20 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp LT40_RS19220 dddc8133936d22275bcd3417f3636770 446 SUPERFAMILY SSF103473 32 444 3.01E-75 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS19220 dddc8133936d22275bcd3417f3636770 446 PANTHER PTHR11662 24 442 3.1E-144 T 23-04-2016 LT40_RS19220 dddc8133936d22275bcd3417f3636770 446 Gene3D G3DSA:1.20.1250.20 35 226 7.7E-43 T 23-04-2016 LT40_RS19220 dddc8133936d22275bcd3417f3636770 446 Gene3D G3DSA:1.20.1250.20 239 440 5.5E-16 T 23-04-2016 LT40_RS19220 dddc8133936d22275bcd3417f3636770 446 Pfam PF07690 Major Facilitator Superfamily 43 400 5.2E-50 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS19220 dddc8133936d22275bcd3417f3636770 446 PANTHER PTHR11662:SF277 24 442 3.1E-144 T 23-04-2016 LT40_RS13815 edf703e0f9acb4dc62aa6afe13418633 323 Gene3D G3DSA:3.40.50.300 5 174 2.6E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13815 edf703e0f9acb4dc62aa6afe13418633 323 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 314 29.492 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 LT40_RS13815 edf703e0f9acb4dc62aa6afe13418633 323 Gene3D G3DSA:1.10.287.890 213 295 1.7E-31 T 23-04-2016 LT40_RS13815 edf703e0f9acb4dc62aa6afe13418633 323 Pfam PF01715 IPP transferase 41 297 4.6E-85 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 LT40_RS13815 edf703e0f9acb4dc62aa6afe13418633 323 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 303 4.9E-98 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 LT40_RS13815 edf703e0f9acb4dc62aa6afe13418633 323 PANTHER PTHR11088 5 308 4.1E-113 T 23-04-2016 LT40_RS13815 edf703e0f9acb4dc62aa6afe13418633 323 SUPERFAMILY SSF52540 8 151 7.12E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 PANTHER PTHR24031:SF0 475 598 1.8E-207 T 23-04-2016 LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 PANTHER PTHR24031:SF0 1 444 1.8E-207 T 23-04-2016 LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 Pfam PF00271 Helicase conserved C-terminal domain 240 344 7.7E-26 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 Gene3D G3DSA:3.40.50.300 217 377 6.3E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 Pfam PF00270 DEAD/DEAH box helicase 25 201 4.5E-47 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 SUPERFAMILY SSF52540 79 365 3.21E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 PANTHER PTHR24031 475 598 1.8E-207 T 23-04-2016 LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 PANTHER PTHR24031 1 444 1.8E-207 T 23-04-2016 LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 SUPERFAMILY SSF52540 24 105 1.38E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 SMART SM00490 263 344 4.5E-31 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 Gene3D G3DSA:3.40.50.300 1 216 1.0E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 SMART SM00487 20 227 1.3E-61 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS14835 bab1b25d047530c99a9b6dd89d0f54c5 626 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 546 49.074 T 23-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 LT40_RS01220 9a2e2a0faab35ffe11b08a95a1f9b4ba 424 Gene3D G3DSA:3.20.20.120 117 380 1.1E-92 T 23-04-2016 IPR029065 Enolase C-terminal domain-like LT40_RS01220 9a2e2a0faab35ffe11b08a95a1f9b4ba 424 SUPERFAMILY SSF51604 135 393 1.18E-70 T 23-04-2016 IPR029065 Enolase C-terminal domain-like LT40_RS01220 9a2e2a0faab35ffe11b08a95a1f9b4ba 424 PANTHER PTHR13794 8 413 6.7E-154 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LT40_RS01220 9a2e2a0faab35ffe11b08a95a1f9b4ba 424 Pfam PF13378 Enolase C-terminal domain-like 174 387 7.2E-50 T 23-04-2016 IPR029065 Enolase C-terminal domain-like LT40_RS01220 9a2e2a0faab35ffe11b08a95a1f9b4ba 424 Gene3D G3DSA:3.30.390.10 1 116 3.5E-15 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LT40_RS01220 9a2e2a0faab35ffe11b08a95a1f9b4ba 424 PANTHER PTHR13794:SF56 8 413 6.7E-154 T 23-04-2016 LT40_RS01220 9a2e2a0faab35ffe11b08a95a1f9b4ba 424 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 32 135 2.7E-9 T 23-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LT40_RS01220 9a2e2a0faab35ffe11b08a95a1f9b4ba 424 SMART SM00922 171 265 6.0E-21 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LT40_RS01220 9a2e2a0faab35ffe11b08a95a1f9b4ba 424 SUPERFAMILY SSF54826 2 135 1.14E-24 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LT40_RS11450 47bd0fa7e34cbe260defbac3d0b02105 93 Pfam PF04221 RelB antitoxin 5 72 7.5E-19 T 23-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ LT40_RS11450 47bd0fa7e34cbe260defbac3d0b02105 93 PANTHER PTHR38781 3 86 5.5E-13 T 23-04-2016 LT40_RS11450 47bd0fa7e34cbe260defbac3d0b02105 93 PANTHER PTHR38781:SF1 3 86 5.5E-13 T 23-04-2016 LT40_RS11450 47bd0fa7e34cbe260defbac3d0b02105 93 PIRSF PIRSF003108 1 91 2.0E-26 T 23-04-2016 IPR026262 Antitoxin DinJ GO:0000986|GO:0015643|GO:0044010 LT40_RS11450 47bd0fa7e34cbe260defbac3d0b02105 93 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 86 8.3E-22 T 23-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ LT40_RS12320 071d28d1f1b6da39c830c37a830f18cd 168 Pfam PF04115 Ureidoglycolate lyase 2 158 9.2E-51 T 23-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 LT40_RS12320 071d28d1f1b6da39c830c37a830f18cd 168 SUPERFAMILY SSF51182 1 162 3.02E-57 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS12320 071d28d1f1b6da39c830c37a830f18cd 168 Gene3D G3DSA:2.60.120.480 2 162 4.7E-58 T 23-04-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 LT40_RS12320 071d28d1f1b6da39c830c37a830f18cd 168 PANTHER PTHR21221:SF2 1 166 9.9E-75 T 23-04-2016 LT40_RS12320 071d28d1f1b6da39c830c37a830f18cd 168 PANTHER PTHR21221 1 166 9.9E-75 T 23-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 LT40_RS12320 071d28d1f1b6da39c830c37a830f18cd 168 PIRSF PIRSF017306 2 163 1.1E-47 T 23-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 LT40_RS12320 071d28d1f1b6da39c830c37a830f18cd 168 Hamap MF_00616 Ureidoglycolate lyase [allA]. 2 163 38.772 T 23-04-2016 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 SUPERFAMILY SSF55021 667 742 1.21E-13 T 23-04-2016 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 69 742 1.5E-186 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 Pfam PF13291 ACT domain 667 743 1.5E-16 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 Gene3D G3DSA:3.10.20.30 416 478 1.4E-25 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 Pfam PF13328 HD domain 40 202 2.5E-45 T 23-04-2016 IPR003607 HD/PDEase domain LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 Gene3D G3DSA:3.30.460.10 205 351 3.7E-54 T 23-04-2016 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 Pfam PF04607 Region found in RelA / SpoT proteins 262 370 2.8E-38 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 PANTHER PTHR21262 69 746 0.0 T 23-04-2016 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 SUPERFAMILY SSF109604 18 218 1.13E-46 T 23-04-2016 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 SUPERFAMILY SSF81301 207 420 2.45E-64 T 23-04-2016 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 SUPERFAMILY SSF81271 408 476 5.89E-22 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 SMART SM00954 262 372 9.8E-67 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 Gene3D G3DSA:3.30.70.260 668 741 1.1E-16 T 23-04-2016 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 PANTHER PTHR21262:SF5 69 746 0.0 T 23-04-2016 LT40_RS06610 e26bebac2e2e344f9b38781c97e93520 747 Pfam PF02824 TGS domain 416 475 3.8E-22 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 LT40_RS12260 9de816fa26ff5e5db4c4f36063ad7361 518 PANTHER PTHR22777:SF14 1 512 2.0E-274 T 23-04-2016 LT40_RS12260 9de816fa26ff5e5db4c4f36063ad7361 518 SUPERFAMILY SSF56176 439 513 9.82E-18 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS12260 9de816fa26ff5e5db4c4f36063ad7361 518 SUPERFAMILY SSF54631 290 425 1.83E-21 T 23-04-2016 LT40_RS12260 9de816fa26ff5e5db4c4f36063ad7361 518 Pfam PF03471 Transporter associated domain 438 514 1.7E-19 T 23-04-2016 IPR005170 Transporter-associated domain LT40_RS12260 9de816fa26ff5e5db4c4f36063ad7361 518 Gene3D G3DSA:3.10.580.10 288 415 6.6E-13 T 23-04-2016 LT40_RS12260 9de816fa26ff5e5db4c4f36063ad7361 518 SMART SM01091 436 515 6.3E-23 T 23-04-2016 IPR005170 Transporter-associated domain LT40_RS12260 9de816fa26ff5e5db4c4f36063ad7361 518 PANTHER PTHR22777 1 512 2.0E-274 T 23-04-2016 LT40_RS12260 9de816fa26ff5e5db4c4f36063ad7361 518 Gene3D G3DSA:3.30.465.10 416 513 7.0E-23 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS12260 9de816fa26ff5e5db4c4f36063ad7361 518 Pfam PF03741 Integral membrane protein TerC family 15 203 3.8E-47 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 LT40_RS12260 9de816fa26ff5e5db4c4f36063ad7361 518 Pfam PF00571 CBS domain 373 422 5.0E-7 T 23-04-2016 IPR000644 CBS domain LT40_RS14085 9f2331d178758d4f8967b74f444c1d95 633 Pfam PF05787 Bacterial protein of unknown function (DUF839) 59 600 1.3E-180 T 23-04-2016 IPR008557 Protein of unknown function DUF839 LT40_RS14085 9f2331d178758d4f8967b74f444c1d95 633 PANTHER PTHR35399:SF2 15 633 1.2E-216 T 23-04-2016 LT40_RS14085 9f2331d178758d4f8967b74f444c1d95 633 SUPERFAMILY SSF63829 292 389 8.5E-14 T 23-04-2016 LT40_RS14085 9f2331d178758d4f8967b74f444c1d95 633 SUPERFAMILY SSF63829 430 600 8.5E-14 T 23-04-2016 LT40_RS14085 9f2331d178758d4f8967b74f444c1d95 633 PANTHER PTHR35399 15 633 1.2E-216 T 23-04-2016 LT40_RS14085 9f2331d178758d4f8967b74f444c1d95 633 Gene3D G3DSA:2.120.10.30 430 594 1.3E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS14085 9f2331d178758d4f8967b74f444c1d95 633 Gene3D G3DSA:2.120.10.30 373 391 1.3E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS05240 787688bc9368ce05411b04c861288437 242 PANTHER PTHR30133:SF1 16 242 1.0E-122 T 23-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 LT40_RS05240 787688bc9368ce05411b04c861288437 242 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 128 6.5E-21 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS05240 787688bc9368ce05411b04c861288437 242 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 233 2.2E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05240 787688bc9368ce05411b04c861288437 242 SUPERFAMILY SSF161098 21 231 7.41E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05240 787688bc9368ce05411b04c861288437 242 PANTHER PTHR30133 16 242 1.0E-122 T 23-04-2016 LT40_RS05240 787688bc9368ce05411b04c861288437 242 Gene3D G3DSA:1.10.3720.10 21 233 5.9E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 99 596 3.8E-234 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 194 213 2.4E-5 T 23-04-2016 LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 627 636 2.4E-5 T 23-04-2016 LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 Pfam PF06480 FtsH Extracellular 5 89 2.8E-11 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 Pfam PF01434 Peptidase family M41 384 595 1.5E-80 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 605 37.09 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 Gene3D G3DSA:1.10.8.60 334 407 2.8E-27 T 23-04-2016 LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 SUPERFAMILY SSF140990 404 606 3.01E-74 T 23-04-2016 LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 Gene3D G3DSA:3.40.50.300 149 333 8.2E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 SUPERFAMILY SSF52540 145 393 1.91E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 SMART SM00382 186 325 8.8E-26 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 1.2E-45 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS12930 d8d46fb8239446e54121d3bbaab9cd74 636 PANTHER PTHR23076 1 607 0.0 T 23-04-2016 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 Pfam PF12697 Alpha/beta hydrolase family 69 324 1.9E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 PRINTS PR00111 Alpha/beta hydrolase fold signature 138 151 8.8E-9 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 PRINTS PR00111 Alpha/beta hydrolase fold signature 152 165 8.8E-9 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 108 8.8E-9 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 PANTHER PTHR10992:SF771 1 333 7.9E-76 T 23-04-2016 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 PANTHER PTHR10992 1 333 7.9E-76 T 23-04-2016 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 Gene3D G3DSA:3.40.50.1820 30 331 8.9E-76 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 PRINTS PR00412 Epoxide hydrolase signature 152 165 4.9E-8 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 PRINTS PR00412 Epoxide hydrolase signature 308 330 4.9E-8 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 PRINTS PR00412 Epoxide hydrolase signature 138 151 4.9E-8 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 PRINTS PR00412 Epoxide hydrolase signature 93 108 4.9E-8 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 PRINTS PR00412 Epoxide hydrolase signature 73 91 4.9E-8 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS07330 3c993007f1eb2e075a37f1076aa1d22c 338 SUPERFAMILY SSF53474 49 332 7.12E-56 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 Gene3D G3DSA:3.30.450.40 128 281 3.9E-15 T 23-04-2016 IPR029016 GAF domain-like LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 SUPERFAMILY SSF47384 492 565 3.53E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 SUPERFAMILY SSF55785 6 114 1.41E-22 T 23-04-2016 IPR000014 PAS domain LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 PANTHER PTHR24423:SF540 39 719 5.7E-184 T 23-04-2016 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 Pfam PF01590 GAF domain 139 289 3.4E-21 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 SMART SM00387 609 718 5.8E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 PANTHER PTHR24423 39 719 5.7E-184 T 23-04-2016 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 SUPERFAMILY SSF55781 311 492 9.51E-38 T 23-04-2016 IPR029016 GAF domain-like LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 SMART SM00065 139 313 5.2E-12 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 PRINTS PR01033 Phytochrome signature 339 359 3.0E-21 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 PRINTS PR01033 Phytochrome signature 241 262 3.0E-21 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 PRINTS PR01033 Phytochrome signature 421 440 3.0E-21 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 PRINTS PR01033 Phytochrome signature 455 473 3.0E-21 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 PRINTS PR01033 Phytochrome signature 154 173 3.0E-21 T 23-04-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 SMART SM00388 502 565 2.1E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 610 714 7.1E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 Gene3D G3DSA:3.30.565.10 552 709 1.7E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 SUPERFAMILY SSF55781 123 307 7.26E-64 T 23-04-2016 IPR029016 GAF domain-like LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 Pfam PF00512 His Kinase A (phospho-acceptor) domain 502 565 9.0E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 Pfam PF08446 PAS fold 12 112 9.2E-12 T 23-04-2016 IPR013654 PAS fold-2 GO:0006355 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 Pfam PF00360 Phytochrome region 321 495 4.3E-43 T 23-04-2016 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 SUPERFAMILY SSF55874 572 712 2.1E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02090 d136939537a14665ae1b3d167c1723e5 720 Gene3D G3DSA:1.10.287.130 495 551 2.8E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 3.6E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 3.6E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 3.6E-17 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 SMART SM00411 4 93 9.1E-40 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 3 97 6.1E-54 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 2 98 30.612 T 23-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 SUPERFAMILY SSF47729 4 93 5.59E-31 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 PANTHER PTHR33175 3 95 5.6E-54 T 23-04-2016 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 Gene3D G3DSA:4.10.520.10 4 94 1.4E-35 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 Pfam PF00216 Bacterial DNA-binding protein 4 92 5.4E-31 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS07535 0f5084c6c1702eb45f182384bb315e30 100 PANTHER PTHR33175:SF2 3 95 5.6E-54 T 23-04-2016 LT40_RS11385 74b83bc713327e4da8658af8a75b289d 335 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 LT40_RS11385 74b83bc713327e4da8658af8a75b289d 335 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 328 23.832 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 LT40_RS11385 74b83bc713327e4da8658af8a75b289d 335 PANTHER PTHR11432 1 333 3.8E-226 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 LT40_RS11385 74b83bc713327e4da8658af8a75b289d 335 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 212 225 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 LT40_RS11385 74b83bc713327e4da8658af8a75b289d 335 Pfam PF00146 NADH dehydrogenase 17 322 3.6E-118 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 LT40_RS11385 74b83bc713327e4da8658af8a75b289d 335 PANTHER PTHR11432:SF8 1 333 3.8E-226 T 23-04-2016 LT40_RS16500 16f9324adfbb9fd31098f77451d8a8fc 240 ProSitePatterns PS01277 Ribonuclease PH signature. 117 129 - T 23-04-2016 IPR018336 Ribonuclease PH, conserved site LT40_RS16500 16f9324adfbb9fd31098f77451d8a8fc 240 PANTHER PTHR11953 1 240 2.6E-85 T 23-04-2016 LT40_RS16500 16f9324adfbb9fd31098f77451d8a8fc 240 Pfam PF03725 3' exoribonuclease family, domain 2 160 225 5.1E-10 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LT40_RS16500 16f9324adfbb9fd31098f77451d8a8fc 240 Gene3D G3DSA:3.30.230.70 8 237 9.0E-34 T 23-04-2016 IPR027408 PNPase/RNase PH domain LT40_RS16500 16f9324adfbb9fd31098f77451d8a8fc 240 SUPERFAMILY SSF54211 2 183 1.72E-46 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS16500 16f9324adfbb9fd31098f77451d8a8fc 240 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 3 238 4.1E-111 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 LT40_RS16500 16f9324adfbb9fd31098f77451d8a8fc 240 SUPERFAMILY SSF55666 154 239 6.15E-25 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 LT40_RS16500 16f9324adfbb9fd31098f77451d8a8fc 240 PANTHER PTHR11953:SF0 1 240 2.6E-85 T 23-04-2016 LT40_RS16500 16f9324adfbb9fd31098f77451d8a8fc 240 Hamap MF_00564 Ribonuclease PH [rph]. 2 239 48.281 T 23-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 LT40_RS16500 16f9324adfbb9fd31098f77451d8a8fc 240 Pfam PF01138 3' exoribonuclease family, domain 1 11 141 2.2E-26 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 Gene3D G3DSA:1.10.10.10 1 86 5.7E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 PANTHER PTHR30126:SF33 1 303 1.4E-161 T 23-04-2016 LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 SUPERFAMILY SSF46785 1 87 3.21E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 5.7E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 PANTHER PTHR30126 1 303 1.4E-161 T 23-04-2016 LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 SUPERFAMILY SSF53850 88 292 4.34E-40 T 23-04-2016 LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 Gene3D G3DSA:3.40.190.10 88 180 1.0E-16 T 23-04-2016 LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 Pfam PF03466 LysR substrate binding domain 87 286 1.6E-42 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS05565 e79941d21adb917f60e50d0f4a380fb7 303 Gene3D G3DSA:3.40.190.10 181 249 2.6E-20 T 23-04-2016 LT40_RS18805 b7d8e4fd1280ed4dcc8c35e1ea2235dc 631 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 607 4.6E-235 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 LT40_RS18805 b7d8e4fd1280ed4dcc8c35e1ea2235dc 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 604 6.8E-75 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LT40_RS18805 b7d8e4fd1280ed4dcc8c35e1ea2235dc 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 236 5.1E-43 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LT40_RS18805 b7d8e4fd1280ed4dcc8c35e1ea2235dc 631 Gene3D G3DSA:3.40.710.10 250 607 2.2E-109 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS18805 b7d8e4fd1280ed4dcc8c35e1ea2235dc 631 PANTHER PTHR30627:SF2 5 609 7.8E-243 T 23-04-2016 LT40_RS18805 b7d8e4fd1280ed4dcc8c35e1ea2235dc 631 SUPERFAMILY SSF56519 56 250 5.89E-51 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LT40_RS18805 b7d8e4fd1280ed4dcc8c35e1ea2235dc 631 PANTHER PTHR30627 5 609 7.8E-243 T 23-04-2016 LT40_RS18805 b7d8e4fd1280ed4dcc8c35e1ea2235dc 631 SUPERFAMILY SSF56601 251 607 8.54E-102 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS18805 b7d8e4fd1280ed4dcc8c35e1ea2235dc 631 Gene3D G3DSA:3.90.1310.10 131 249 1.8E-38 T 23-04-2016 LT40_RS12650 a48ed6f7a19f5365af9b2208a0415102 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 8.9E-45 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 LT40_RS12650 a48ed6f7a19f5365af9b2208a0415102 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 23-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 LT40_RS12650 a48ed6f7a19f5365af9b2208a0415102 249 Gene3D G3DSA:3.40.50.620 1 247 1.5E-101 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS12650 a48ed6f7a19f5365af9b2208a0415102 249 PANTHER PTHR21294:SF8 1 249 1.6E-150 T 23-04-2016 LT40_RS12650 a48ed6f7a19f5365af9b2208a0415102 249 SUPERFAMILY SSF52402 1 244 2.86E-83 T 23-04-2016 LT40_RS12650 a48ed6f7a19f5365af9b2208a0415102 249 SMART SM00893 23 211 1.6E-66 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 LT40_RS12650 a48ed6f7a19f5365af9b2208a0415102 249 PIRSF PIRSF000090 1 249 5.0E-83 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 LT40_RS12650 a48ed6f7a19f5365af9b2208a0415102 249 PANTHER PTHR21294 1 249 1.6E-150 T 23-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 LT40_RS08210 d1816b936f10a617d32073562ea462c6 223 SMART SM00345 21 79 6.5E-13 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS08210 d1816b936f10a617d32073562ea462c6 223 Gene3D G3DSA:1.20.120.530 82 220 4.3E-42 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS08210 d1816b936f10a617d32073562ea462c6 223 Pfam PF07729 FCD domain 89 209 3.2E-28 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS08210 d1816b936f10a617d32073562ea462c6 223 SUPERFAMILY SSF48008 86 219 9.68E-27 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS08210 d1816b936f10a617d32073562ea462c6 223 Gene3D G3DSA:1.10.10.10 7 80 1.6E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08210 d1816b936f10a617d32073562ea462c6 223 PANTHER PTHR11751:SF436 16 105 2.0E-36 T 23-04-2016 LT40_RS08210 d1816b936f10a617d32073562ea462c6 223 SMART SM00895 89 210 2.9E-19 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS08210 d1816b936f10a617d32073562ea462c6 223 PANTHER PTHR11751 16 105 2.0E-36 T 23-04-2016 LT40_RS08210 d1816b936f10a617d32073562ea462c6 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 79 1.0E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS08210 d1816b936f10a617d32073562ea462c6 223 SUPERFAMILY SSF46785 12 83 1.77E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 Gene3D G3DSA:3.40.50.880 5 223 8.5E-61 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 5.9E-79 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 PANTHER PTHR11922 4 522 5.2E-282 T 23-04-2016 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 7.1E-5 T 23-04-2016 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 7.1E-5 T 23-04-2016 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 7.1E-5 T 23-04-2016 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 PANTHER PTHR11922:SF2 4 522 5.2E-282 T 23-04-2016 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 SUPERFAMILY SSF52317 5 204 6.3E-56 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 Gene3D G3DSA:3.40.50.620 224 399 1.1E-57 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 8.6E-147 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 Pfam PF00958 GMP synthase C terminal domain 433 524 2.0E-41 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 SUPERFAMILY SSF52402 197 420 1.98E-57 T 23-04-2016 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 55.52 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 1.1E-36 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 Pfam PF02540 NAD synthase 218 289 1.1E-7 T 23-04-2016 IPR022310 NAD/GMP synthase LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 SUPERFAMILY SSF54810 405 525 3.53E-49 T 23-04-2016 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 5.1E-7 T 23-04-2016 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 5.1E-7 T 23-04-2016 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 5.1E-7 T 23-04-2016 LT40_RS20210 7a07eead6cb61314be0784353a013be0 525 Gene3D G3DSA:3.30.300.10 401 525 1.6E-52 T 23-04-2016 LT40_RS18575 51b717f820feebd3fc8802b8697205ca 220 SUPERFAMILY SSF63380 1 88 1.19E-24 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS18575 51b717f820feebd3fc8802b8697205ca 220 Pfam PF00677 Lumazine binding domain 3 87 1.6E-20 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18575 51b717f820feebd3fc8802b8697205ca 220 Pfam PF00677 Lumazine binding domain 100 184 2.1E-21 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18575 51b717f820feebd3fc8802b8697205ca 220 PIRSF PIRSF000498 1 212 6.7E-77 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18575 51b717f820feebd3fc8802b8697205ca 220 SUPERFAMILY SSF63380 93 194 1.79E-32 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS18575 51b717f820feebd3fc8802b8697205ca 220 Gene3D G3DSA:2.40.30.20 5 104 7.2E-30 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS18575 51b717f820feebd3fc8802b8697205ca 220 Gene3D G3DSA:2.40.30.20 105 194 1.5E-32 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS18575 51b717f820feebd3fc8802b8697205ca 220 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 199 2.2E-66 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18575 51b717f820feebd3fc8802b8697205ca 220 PANTHER PTHR21098 1 220 1.1E-98 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS20145 2ff0ee021dd097c03ea6586e4709a49f 290 SUPERFAMILY SSF46689 191 236 4.17E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS20145 2ff0ee021dd097c03ea6586e4709a49f 290 PANTHER PTHR11019 37 290 3.7E-49 T 23-04-2016 LT40_RS20145 2ff0ee021dd097c03ea6586e4709a49f 290 SMART SM00342 203 286 7.7E-32 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS20145 2ff0ee021dd097c03ea6586e4709a49f 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS20145 2ff0ee021dd097c03ea6586e4709a49f 290 SUPERFAMILY SSF46689 239 286 1.97E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS20145 2ff0ee021dd097c03ea6586e4709a49f 290 PANTHER PTHR11019:SF105 37 290 3.7E-49 T 23-04-2016 LT40_RS20145 2ff0ee021dd097c03ea6586e4709a49f 290 Gene3D G3DSA:1.10.10.60 241 286 1.3E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS20145 2ff0ee021dd097c03ea6586e4709a49f 290 Gene3D G3DSA:1.10.10.60 185 240 2.3E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS20145 2ff0ee021dd097c03ea6586e4709a49f 290 Pfam PF12833 Helix-turn-helix domain 209 286 3.7E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS20145 2ff0ee021dd097c03ea6586e4709a49f 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 2.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS20145 2ff0ee021dd097c03ea6586e4709a49f 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 2.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS18855 f122389476e746a17ee584db08b6e2d3 345 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 216 341 1.7E-18 T 23-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS18855 f122389476e746a17ee584db08b6e2d3 345 Gene3D G3DSA:1.10.8.60 145 223 1.9E-35 T 23-04-2016 LT40_RS18855 f122389476e746a17ee584db08b6e2d3 345 Gene3D G3DSA:1.20.272.20 224 340 1.3E-44 T 23-04-2016 LT40_RS18855 f122389476e746a17ee584db08b6e2d3 345 SUPERFAMILY SSF48019 213 337 1.02E-33 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 LT40_RS18855 f122389476e746a17ee584db08b6e2d3 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 336 7.3E-117 T 23-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 LT40_RS18855 f122389476e746a17ee584db08b6e2d3 345 PANTHER PTHR34388 1 345 3.8E-82 T 23-04-2016 LT40_RS18855 f122389476e746a17ee584db08b6e2d3 345 Pfam PF06144 DNA polymerase III, delta subunit 20 191 3.8E-33 T 23-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 LT40_RS18855 f122389476e746a17ee584db08b6e2d3 345 SUPERFAMILY SSF52540 1 211 9.74E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18855 f122389476e746a17ee584db08b6e2d3 345 Gene3D G3DSA:3.40.50.300 1 141 2.0E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20985 f2a15c7b107d1c2edb85e652941a9eb4 203 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 68 159 6.7E-16 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 LT40_RS20985 f2a15c7b107d1c2edb85e652941a9eb4 203 PANTHER PTHR10209 34 170 7.1E-29 T 23-04-2016 LT40_RS20985 f2a15c7b107d1c2edb85e652941a9eb4 203 Gene3D G3DSA:2.60.120.330 6 172 4.5E-38 T 23-04-2016 IPR027443 Isopenicillin N synthase-like LT40_RS20985 f2a15c7b107d1c2edb85e652941a9eb4 203 PANTHER PTHR10209:SF68 34 170 7.1E-29 T 23-04-2016 LT40_RS20985 f2a15c7b107d1c2edb85e652941a9eb4 203 SUPERFAMILY SSF51197 7 172 2.13E-36 T 23-04-2016 LT40_RS04255 3e92b3106adbc042b212d0519db176d9 190 PIRSF PIRSF011489 1 190 4.2E-76 T 23-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 LT40_RS04255 3e92b3106adbc042b212d0519db176d9 190 PANTHER PTHR38764 2 189 2.1E-67 T 23-04-2016 LT40_RS04255 3e92b3106adbc042b212d0519db176d9 190 Pfam PF04336 Protein of unknown function, DUF479 81 183 2.8E-35 T 23-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 LT40_RS04255 3e92b3106adbc042b212d0519db176d9 190 PANTHER PTHR38764:SF1 2 189 2.1E-67 T 23-04-2016 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 Pfam PF05746 DALR anticodon binding domain 579 671 4.9E-7 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 PANTHER PTHR30075 1 683 0.0 T 23-04-2016 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.8E-34 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.8E-34 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 241 256 1.8E-34 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 389 408 1.8E-34 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 1.8E-34 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 PANTHER PTHR30075:SF2 1 683 0.0 T 23-04-2016 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 SUPERFAMILY SSF109604 334 485 1.41E-19 T 23-04-2016 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 683 25.064 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 544 2.3E-203 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS15995 7d6682bbfec614d2de1216810e06aaa3 684 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 683 1.0E-238 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 Pfam PF00005 ABC transporter 17 178 2.1E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 Pfam PF00005 ABC transporter 328 459 2.6E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 Pfam PF12848 ABC transporter 218 294 8.5E-27 T 23-04-2016 IPR032781 ABC-transporter extension domain LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 PANTHER PTHR19211:SF49 1 554 0.0 T 23-04-2016 LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 SUPERFAMILY SSF52540 119 258 1.86E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 SUPERFAMILY SSF52540 2 92 1.86E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 PANTHER PTHR19211 1 554 0.0 T 23-04-2016 LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 Gene3D G3DSA:3.40.50.300 1 266 1.6E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 Gene3D G3DSA:3.40.50.300 311 523 5.3E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 SMART SM00382 26 223 2.5E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 SMART SM00382 337 506 6.8E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS16815 2e19ff02058d900f37c9e5e595d3345e 636 SUPERFAMILY SSF52540 296 518 3.35E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 Gene3D G3DSA:3.90.190.20 315 448 5.0E-42 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 Pfam PF01225 Mur ligase family, catalytic domain 26 94 8.4E-10 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 PANTHER PTHR23135:SF3 14 447 1.3E-156 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 SUPERFAMILY SSF63418 4 97 5.23E-25 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 Gene3D G3DSA:3.40.1190.10 84 313 3.3E-70 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 391 1.3E-10 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 447 1.0E-144 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 Gene3D G3DSA:3.40.1390.10 5 82 3.0E-24 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 SUPERFAMILY SSF53623 102 314 1.83E-55 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 PANTHER PTHR23135 14 447 1.3E-156 T 23-04-2016 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 Pfam PF08245 Mur ligase middle domain 107 296 6.3E-47 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 448 33.122 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04035 06a77cce9ae2f4ee2358c3f509f08a4b 455 SUPERFAMILY SSF53244 316 447 2.75E-35 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS06780 2569eee4b658c086e0ee950f38479083 295 PANTHER PTHR17630:SF32 67 295 2.1E-65 T 23-04-2016 LT40_RS06780 2569eee4b658c086e0ee950f38479083 295 Pfam PF01738 Dienelactone hydrolase family 85 294 9.3E-52 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 LT40_RS06780 2569eee4b658c086e0ee950f38479083 295 PANTHER PTHR17630 67 295 2.1E-65 T 23-04-2016 LT40_RS06780 2569eee4b658c086e0ee950f38479083 295 SUPERFAMILY SSF53474 70 294 1.07E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS06780 2569eee4b658c086e0ee950f38479083 295 Gene3D G3DSA:3.40.50.1820 70 294 3.2E-61 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS12410 f277ede725623b9bc9df066c22c6cd7d 496 Pfam PF01593 Flavin containing amine oxidoreductase 15 490 6.0E-41 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 LT40_RS12410 f277ede725623b9bc9df066c22c6cd7d 496 PANTHER PTHR10668:SF4 7 494 2.2E-111 T 23-04-2016 LT40_RS12410 f277ede725623b9bc9df066c22c6cd7d 496 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 7 495 1.7E-223 T 23-04-2016 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 LT40_RS12410 f277ede725623b9bc9df066c22c6cd7d 496 PANTHER PTHR10668 7 494 2.2E-111 T 23-04-2016 LT40_RS12410 f277ede725623b9bc9df066c22c6cd7d 496 SUPERFAMILY SSF51905 1 320 3.11E-72 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12410 f277ede725623b9bc9df066c22c6cd7d 496 SUPERFAMILY SSF51905 452 494 3.11E-72 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12410 f277ede725623b9bc9df066c22c6cd7d 496 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 462 482 - T 23-04-2016 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site LT40_RS12410 f277ede725623b9bc9df066c22c6cd7d 496 Gene3D G3DSA:3.50.50.60 5 97 6.3E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12410 f277ede725623b9bc9df066c22c6cd7d 496 Gene3D G3DSA:3.50.50.60 202 358 6.3E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 Gene3D G3DSA:3.50.50.60 5 119 9.9E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.9E-41 T 23-04-2016 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 3.9E-41 T 23-04-2016 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 3.9E-41 T 23-04-2016 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 3.9E-41 T 23-04-2016 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.9E-41 T 23-04-2016 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 312 1.1E-119 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 2.3E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 SUPERFAMILY SSF51905 2 313 7.78E-56 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 Gene3D G3DSA:3.50.50.60 120 235 3.8E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.3E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.3E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 1.3E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.3E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.3E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.3E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 1.3E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.3E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.3E-77 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 Gene3D G3DSA:3.50.50.60 236 314 5.9E-10 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PANTHER PTHR22912:SF48 1 313 5.6E-160 T 23-04-2016 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 PANTHER PTHR22912 1 313 5.6E-160 T 23-04-2016 LT40_RS20045 582518b7893718b4a861b26fe9f90ac8 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 LT40_RS17630 b478733d367e5fb26525e9ce5b69e255 1525 SUPERFAMILY SSF53474 15 172 8.61E-5 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS17630 b478733d367e5fb26525e9ce5b69e255 1525 SUPERFAMILY SSF159501 1188 1398 4.81E-38 T 23-04-2016 LT40_RS01270 d63c17e390d6ab3846cfd1e77e1282a6 196 Gene3D G3DSA:3.40.50.850 16 196 2.7E-46 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS01270 d63c17e390d6ab3846cfd1e77e1282a6 196 Pfam PF00857 Isochorismatase family 25 191 6.5E-33 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS01270 d63c17e390d6ab3846cfd1e77e1282a6 196 SUPERFAMILY SSF52499 4 195 3.14E-45 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS01270 d63c17e390d6ab3846cfd1e77e1282a6 196 PANTHER PTHR11080 1 196 2.2E-57 T 23-04-2016 LT40_RS01270 d63c17e390d6ab3846cfd1e77e1282a6 196 PANTHER PTHR11080:SF17 1 196 2.2E-57 T 23-04-2016 LT40_RS11235 c8b3d19eeacccb28afda111371f60de7 334 PANTHER PTHR22960 6 281 6.7E-118 T 23-04-2016 LT40_RS11235 c8b3d19eeacccb28afda111371f60de7 334 Pfam PF06463 Molybdenum Cofactor Synthesis C 188 316 2.1E-38 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS11235 c8b3d19eeacccb28afda111371f60de7 334 SMART SM00729 17 221 2.1E-10 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LT40_RS11235 c8b3d19eeacccb28afda111371f60de7 334 Gene3D G3DSA:3.20.20.70 8 292 5.8E-71 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS11235 c8b3d19eeacccb28afda111371f60de7 334 Pfam PF04055 Radical SAM superfamily 22 181 9.1E-29 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS11235 c8b3d19eeacccb28afda111371f60de7 334 Pfam PF13353 4Fe-4S single cluster domain 24 123 2.0E-8 T 23-04-2016 LT40_RS11235 c8b3d19eeacccb28afda111371f60de7 334 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 23 34 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS11235 c8b3d19eeacccb28afda111371f60de7 334 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 8 334 39.882 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS11235 c8b3d19eeacccb28afda111371f60de7 334 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 8 334 7.8E-114 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 LT40_RS11235 c8b3d19eeacccb28afda111371f60de7 334 SUPERFAMILY SSF102114 8 281 6.93E-76 T 23-04-2016 LT40_RS16450 8da318e41f740a45a663d448896dd00c 247 PANTHER PTHR33446 26 245 2.5E-16 T 23-04-2016 LT40_RS16450 8da318e41f740a45a663d448896dd00c 247 SUPERFAMILY SSF74653 157 240 4.19E-18 T 23-04-2016 LT40_RS16450 8da318e41f740a45a663d448896dd00c 247 PRINTS PR01217 Proline rich extensin signature 75 92 2.8E-13 T 23-04-2016 LT40_RS16450 8da318e41f740a45a663d448896dd00c 247 PRINTS PR01217 Proline rich extensin signature 55 71 2.8E-13 T 23-04-2016 LT40_RS16450 8da318e41f740a45a663d448896dd00c 247 PRINTS PR01217 Proline rich extensin signature 33 54 2.8E-13 T 23-04-2016 LT40_RS16450 8da318e41f740a45a663d448896dd00c 247 PRINTS PR01217 Proline rich extensin signature 94 119 2.8E-13 T 23-04-2016 LT40_RS16450 8da318e41f740a45a663d448896dd00c 247 Gene3D G3DSA:3.30.1150.10 131 245 5.6E-19 T 23-04-2016 LT40_RS16450 8da318e41f740a45a663d448896dd00c 247 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 165 244 1.4E-15 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 LT40_RS16450 8da318e41f740a45a663d448896dd00c 247 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 166 244 1.5E-19 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 LT40_RS16450 8da318e41f740a45a663d448896dd00c 247 PANTHER PTHR33446:SF2 26 245 2.5E-16 T 23-04-2016 LT40_RS15710 71691124ed03aad17c91b71bdb310007 306 Pfam PF01297 Zinc-uptake complex component A periplasmic 27 301 1.4E-55 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 LT40_RS15710 71691124ed03aad17c91b71bdb310007 306 Gene3D G3DSA:3.40.50.1980 18 193 1.9E-43 T 23-04-2016 LT40_RS15710 71691124ed03aad17c91b71bdb310007 306 SUPERFAMILY SSF53807 24 303 2.45E-72 T 23-04-2016 LT40_RS15710 71691124ed03aad17c91b71bdb310007 306 PANTHER PTHR30477 9 278 7.2E-66 T 23-04-2016 LT40_RS15710 71691124ed03aad17c91b71bdb310007 306 Gene3D G3DSA:3.40.50.1980 195 304 1.0E-21 T 23-04-2016 LT40_RS15710 71691124ed03aad17c91b71bdb310007 306 PRINTS PR00690 Adhesin family signature 192 213 1.2E-5 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LT40_RS15710 71691124ed03aad17c91b71bdb310007 306 PRINTS PR00690 Adhesin family signature 55 68 1.2E-5 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LT40_RS15710 71691124ed03aad17c91b71bdb310007 306 PRINTS PR00690 Adhesin family signature 68 85 1.2E-5 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 LT40_RS15710 71691124ed03aad17c91b71bdb310007 306 PANTHER PTHR30477:SF1 9 278 7.2E-66 T 23-04-2016 LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 Gene3D G3DSA:3.40.50.1100 130 202 2.0E-7 T 23-04-2016 LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 Gene3D G3DSA:3.40.50.1100 203 434 3.0E-95 T 23-04-2016 LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 PANTHER PTHR10314 53 329 1.6E-164 T 23-04-2016 LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 PANTHER PTHR10314 361 468 1.6E-164 T 23-04-2016 LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 PANTHER PTHR10314 25 36 1.6E-164 T 23-04-2016 LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 PANTHER PTHR10314:SF1 53 329 1.6E-164 T 23-04-2016 LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 PANTHER PTHR10314:SF1 361 468 1.6E-164 T 23-04-2016 LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 PANTHER PTHR10314:SF1 25 36 1.6E-164 T 23-04-2016 LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 Pfam PF14821 Threonine synthase N terminus 2 80 6.0E-30 T 23-04-2016 IPR029144 Threonine synthase, N-terminal LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 SUPERFAMILY SSF53686 1 461 7.27E-166 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 Gene3D G3DSA:3.90.1380.10 1 85 1.5E-31 T 23-04-2016 IPR029144 Threonine synthase, N-terminal LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 401 3.6E-25 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 TIGRFAM TIGR00260 thrC: threonine synthase 67 429 1.3E-80 T 23-04-2016 IPR004450 Threonine synthase-like LT40_RS20380 eb1a4f9f85b066c604506eb9c694cdec 469 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 LT40_RS00915 6970b86ca571cca83288afce721d22c0 218 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 8 215 9.2E-69 T 23-04-2016 IPR026336 Metallophosphoesterase, DNA ligase-associated LT40_RS00915 6970b86ca571cca83288afce721d22c0 218 PANTHER PTHR39323:SF1 6 216 5.5E-31 T 23-04-2016 LT40_RS00915 6970b86ca571cca83288afce721d22c0 218 Pfam PF00149 Calcineurin-like phosphoesterase 29 124 3.3E-4 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LT40_RS00915 6970b86ca571cca83288afce721d22c0 218 Gene3D G3DSA:3.60.21.10 29 137 4.0E-8 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS00915 6970b86ca571cca83288afce721d22c0 218 SUPERFAMILY SSF56300 30 168 1.9E-12 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS00915 6970b86ca571cca83288afce721d22c0 218 PIRSF PIRSF000887 7 211 1.1E-46 T 23-04-2016 IPR024173 Phosphoesterase, MJ0037 LT40_RS00915 6970b86ca571cca83288afce721d22c0 218 PANTHER PTHR39323 6 216 5.5E-31 T 23-04-2016 LT40_RS02880 c6c2b6d2dfdb98d95f73cc7e250740d2 293 PANTHER PTHR22911 8 283 1.2E-91 T 23-04-2016 LT40_RS02880 c6c2b6d2dfdb98d95f73cc7e250740d2 293 SUPERFAMILY SSF103481 45 135 6.15E-6 T 23-04-2016 LT40_RS02880 c6c2b6d2dfdb98d95f73cc7e250740d2 293 SUPERFAMILY SSF103481 184 279 1.44E-8 T 23-04-2016 LT40_RS02880 c6c2b6d2dfdb98d95f73cc7e250740d2 293 PANTHER PTHR22911:SF37 8 283 1.2E-91 T 23-04-2016 LT40_RS02880 c6c2b6d2dfdb98d95f73cc7e250740d2 293 Pfam PF00892 EamA-like transporter family 148 276 8.9E-15 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS14600 9fdd7d8c972392b86a065544a9b19006 246 Gene3D G3DSA:3.20.20.10 1 227 1.3E-94 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS14600 9fdd7d8c972392b86a065544a9b19006 246 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 223 1.0E-77 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 LT40_RS14600 9fdd7d8c972392b86a065544a9b19006 246 Pfam PF01168 Alanine racemase, N-terminal domain 10 223 8.3E-36 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS14600 9fdd7d8c972392b86a065544a9b19006 246 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 76 90 - T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 LT40_RS14600 9fdd7d8c972392b86a065544a9b19006 246 PANTHER PTHR10146 1 225 9.6E-105 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 LT40_RS14600 9fdd7d8c972392b86a065544a9b19006 246 PIRSF PIRSF004848 1 229 2.2E-74 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 LT40_RS14600 9fdd7d8c972392b86a065544a9b19006 246 SUPERFAMILY SSF51419 1 221 5.76E-81 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS04545 93de5c108b74e1fabe689385e90df694 228 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 63 72 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 LT40_RS04545 93de5c108b74e1fabe689385e90df694 228 Gene3D G3DSA:3.40.470.10 6 227 5.1E-104 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like LT40_RS04545 93de5c108b74e1fabe689385e90df694 228 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 11 219 5.4E-86 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 LT40_RS04545 93de5c108b74e1fabe689385e90df694 228 SMART SM00986 55 215 4.0E-36 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like LT40_RS04545 93de5c108b74e1fabe689385e90df694 228 SMART SM00987 55 215 4.0E-36 T 23-04-2016 LT40_RS04545 93de5c108b74e1fabe689385e90df694 228 PANTHER PTHR11264 9 228 5.2E-138 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 LT40_RS04545 93de5c108b74e1fabe689385e90df694 228 Pfam PF03167 Uracil DNA glycosylase superfamily 60 214 3.5E-24 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like LT40_RS04545 93de5c108b74e1fabe689385e90df694 228 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 10 226 40.407 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 LT40_RS04545 93de5c108b74e1fabe689385e90df694 228 SUPERFAMILY SSF52141 8 227 4.36E-95 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like LT40_RS20460 39b3550c53d359bfb30f62f50c73e006 336 Gene3D G3DSA:3.40.50.180 150 335 1.1E-65 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS20460 39b3550c53d359bfb30f62f50c73e006 336 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 335 32.16 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS20460 39b3550c53d359bfb30f62f50c73e006 336 SUPERFAMILY SSF52738 151 335 2.75E-61 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS20460 39b3550c53d359bfb30f62f50c73e006 336 SMART SM00448 1 116 6.1E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20460 39b3550c53d359bfb30f62f50c73e006 336 Pfam PF01339 CheB methylesterase 154 330 8.3E-54 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS20460 39b3550c53d359bfb30f62f50c73e006 336 PANTHER PTHR24421 1 331 8.9E-105 T 23-04-2016 LT40_RS20460 39b3550c53d359bfb30f62f50c73e006 336 PIRSF PIRSF000876 1 336 5.5E-98 T 23-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS20460 39b3550c53d359bfb30f62f50c73e006 336 PANTHER PTHR24421:SF16 1 331 8.9E-105 T 23-04-2016 LT40_RS20460 39b3550c53d359bfb30f62f50c73e006 336 SUPERFAMILY SSF52172 1 103 9.39E-22 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS20460 39b3550c53d359bfb30f62f50c73e006 336 Pfam PF00072 Response regulator receiver domain 3 102 1.3E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20460 39b3550c53d359bfb30f62f50c73e006 336 Gene3D G3DSA:3.40.50.2300 1 105 9.3E-23 T 23-04-2016 LT40_RS06355 f3ba4d825a31f926e8b325b72502e44c 298 PANTHER PTHR30419:SF2 1 291 1.3E-151 T 23-04-2016 LT40_RS06355 f3ba4d825a31f926e8b325b72502e44c 298 Gene3D G3DSA:3.40.190.10 177 265 3.3E-19 T 23-04-2016 LT40_RS06355 f3ba4d825a31f926e8b325b72502e44c 298 Pfam PF03466 LysR substrate binding domain 91 291 5.7E-41 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS06355 f3ba4d825a31f926e8b325b72502e44c 298 Gene3D G3DSA:3.40.190.10 92 176 3.3E-22 T 23-04-2016 LT40_RS06355 f3ba4d825a31f926e8b325b72502e44c 298 SUPERFAMILY SSF53850 92 292 4.56E-41 T 23-04-2016 LT40_RS06355 f3ba4d825a31f926e8b325b72502e44c 298 PANTHER PTHR30419 1 291 1.3E-151 T 23-04-2016 LT40_RS06355 f3ba4d825a31f926e8b325b72502e44c 298 Gene3D G3DSA:1.10.10.10 3 86 5.9E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS06355 f3ba4d825a31f926e8b325b72502e44c 298 SUPERFAMILY SSF46785 1 113 5.32E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS06355 f3ba4d825a31f926e8b325b72502e44c 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.4E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS14580 83f66d79c916f2e6a20f063a3a36233a 423 PANTHER PTHR11647:SF70 2 422 4.5E-144 T 23-04-2016 LT40_RS14580 83f66d79c916f2e6a20f063a3a36233a 423 Gene3D G3DSA:3.20.20.140 70 383 1.4E-86 T 23-04-2016 LT40_RS14580 83f66d79c916f2e6a20f063a3a36233a 423 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 423 31.731 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS14580 83f66d79c916f2e6a20f063a3a36233a 423 SUPERFAMILY SSF51338 3 55 5.25E-23 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS14580 83f66d79c916f2e6a20f063a3a36233a 423 SUPERFAMILY SSF51338 367 421 5.25E-23 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS14580 83f66d79c916f2e6a20f063a3a36233a 423 SUPERFAMILY SSF51556 56 366 7.99E-87 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS14580 83f66d79c916f2e6a20f063a3a36233a 423 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 22 419 1.3E-87 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS14580 83f66d79c916f2e6a20f063a3a36233a 423 Pfam PF01979 Amidohydrolase family 162 419 2.2E-9 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LT40_RS14580 83f66d79c916f2e6a20f063a3a36233a 423 Gene3D G3DSA:2.30.40.10 3 69 3.8E-12 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS14580 83f66d79c916f2e6a20f063a3a36233a 423 PANTHER PTHR11647 2 422 4.5E-144 T 23-04-2016 LT40_RS06485 db16a6805f5bd271f6b8b9444f0ffc3b 393 SUPERFAMILY SSF103473 4 381 2.49E-46 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS06485 db16a6805f5bd271f6b8b9444f0ffc3b 393 Gene3D G3DSA:1.20.1250.20 205 380 2.7E-15 T 23-04-2016 LT40_RS06485 db16a6805f5bd271f6b8b9444f0ffc3b 393 PANTHER PTHR23501:SF4 1 376 1.5E-79 T 23-04-2016 LT40_RS06485 db16a6805f5bd271f6b8b9444f0ffc3b 393 Pfam PF07690 Major Facilitator Superfamily 15 327 5.4E-29 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS06485 db16a6805f5bd271f6b8b9444f0ffc3b 393 Gene3D G3DSA:1.20.1250.20 10 190 1.6E-17 T 23-04-2016 LT40_RS06485 db16a6805f5bd271f6b8b9444f0ffc3b 393 PANTHER PTHR23501 1 376 1.5E-79 T 23-04-2016 LT40_RS09885 00ed4a9418af9897028867b26df6f248 320 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 46 8.8E-13 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS09885 00ed4a9418af9897028867b26df6f248 320 Gene3D G3DSA:1.10.260.40 2 51 2.2E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS09885 00ed4a9418af9897028867b26df6f248 320 Pfam PF13377 Periplasmic binding protein-like domain 165 317 2.1E-16 T 23-04-2016 LT40_RS09885 00ed4a9418af9897028867b26df6f248 320 SUPERFAMILY SSF53822 56 310 9.24E-55 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS09885 00ed4a9418af9897028867b26df6f248 320 SMART SM00354 1 69 4.0E-20 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS09885 00ed4a9418af9897028867b26df6f248 320 SUPERFAMILY SSF47413 2 57 7.13E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS09885 00ed4a9418af9897028867b26df6f248 320 Gene3D G3DSA:3.40.50.2300 170 297 2.3E-15 T 23-04-2016 LT40_RS09885 00ed4a9418af9897028867b26df6f248 320 PANTHER PTHR30146:SF27 1 320 1.6E-143 T 23-04-2016 LT40_RS09885 00ed4a9418af9897028867b26df6f248 320 PANTHER PTHR30146 1 320 1.6E-143 T 23-04-2016 LT40_RS09885 00ed4a9418af9897028867b26df6f248 320 Gene3D G3DSA:3.40.50.2300 52 169 4.4E-43 T 23-04-2016 LT40_RS07720 7dea04e4cc647a3f5b7ba71c201ae5da 619 PANTHER PTHR24221 3 610 0.0 T 23-04-2016 LT40_RS07720 7dea04e4cc647a3f5b7ba71c201ae5da 619 Gene3D G3DSA:3.40.50.300 360 596 2.3E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07720 7dea04e4cc647a3f5b7ba71c201ae5da 619 PANTHER PTHR24221:SF203 3 610 0.0 T 23-04-2016 LT40_RS07720 7dea04e4cc647a3f5b7ba71c201ae5da 619 Pfam PF00664 ABC transporter transmembrane region 43 307 8.3E-19 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS07720 7dea04e4cc647a3f5b7ba71c201ae5da 619 SMART SM00382 386 577 2.4E-21 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS07720 7dea04e4cc647a3f5b7ba71c201ae5da 619 SUPERFAMILY SSF52540 353 601 1.7E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07720 7dea04e4cc647a3f5b7ba71c201ae5da 619 Gene3D G3DSA:1.20.1560.10 27 333 2.5E-37 T 23-04-2016 LT40_RS07720 7dea04e4cc647a3f5b7ba71c201ae5da 619 SUPERFAMILY SSF90123 20 339 5.49E-49 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS07720 7dea04e4cc647a3f5b7ba71c201ae5da 619 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS07720 7dea04e4cc647a3f5b7ba71c201ae5da 619 Pfam PF00005 ABC transporter 377 531 9.2E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS12595 5f7faaba88abb191ae4be9b4f89bd042 122 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 83 1.2E-7 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 LT40_RS12595 5f7faaba88abb191ae4be9b4f89bd042 122 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 120 2.4E-36 T 23-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 LT40_RS12595 5f7faaba88abb191ae4be9b4f89bd042 122 Gene3D G3DSA:1.20.1300.10 1 122 4.7E-37 T 23-04-2016 LT40_RS12595 5f7faaba88abb191ae4be9b4f89bd042 122 PANTHER PTHR38689:SF1 2 122 2.3E-52 T 23-04-2016 LT40_RS12595 5f7faaba88abb191ae4be9b4f89bd042 122 SUPERFAMILY SSF81343 4 122 2.83E-28 T 23-04-2016 LT40_RS12595 5f7faaba88abb191ae4be9b4f89bd042 122 PIRSF PIRSF000169 1 122 1.6E-44 T 23-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 LT40_RS12595 5f7faaba88abb191ae4be9b4f89bd042 122 PANTHER PTHR38689 2 122 2.3E-52 T 23-04-2016 LT40_RS13995 13c5a8ef76a2863ae20351e63e4d074a 427 PANTHER PTHR30569 1 420 2.0E-44 T 23-04-2016 IPR030191 Cytosine permease GO:0015209|GO:0016021 LT40_RS13995 13c5a8ef76a2863ae20351e63e4d074a 427 TIGRFAM TIGR02358 thia_cytX: putative hydroxymethylpyrimidine transporter CytX 21 414 9.7E-132 T 23-04-2016 IPR012732 Hydroxymethylpyrimidine transporter CytX LT40_RS13995 13c5a8ef76a2863ae20351e63e4d074a 427 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 393 5.9E-21 T 23-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 LT40_RS10285 0aa1f3c06affc2943bae997db12fe76e 248 SUPERFAMILY SSF53790 2 230 1.83E-65 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS10285 0aa1f3c06affc2943bae997db12fe76e 248 Gene3D G3DSA:3.30.950.10 110 228 1.5E-39 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 LT40_RS10285 0aa1f3c06affc2943bae997db12fe76e 248 PANTHER PTHR21091:SF17 1 206 9.7E-63 T 23-04-2016 LT40_RS10285 0aa1f3c06affc2943bae997db12fe76e 248 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 206 3.2E-45 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS10285 0aa1f3c06affc2943bae997db12fe76e 248 Gene3D G3DSA:3.40.1010.10 2 109 3.6E-31 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LT40_RS10285 0aa1f3c06affc2943bae997db12fe76e 248 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 247 9.6E-93 T 23-04-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 LT40_RS10285 0aa1f3c06affc2943bae997db12fe76e 248 PANTHER PTHR21091 1 206 9.7E-63 T 23-04-2016 LT40_RS10285 0aa1f3c06affc2943bae997db12fe76e 248 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LT40_RS05340 82158ddee44cbf13ddecfede54de98c0 73 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 48 1.1E-9 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain LT40_RS05340 82158ddee44cbf13ddecfede54de98c0 73 PANTHER PTHR37424 2 70 7.1E-18 T 23-04-2016 LT40_RS05340 82158ddee44cbf13ddecfede54de98c0 73 PANTHER PTHR37424:SF1 2 70 7.1E-18 T 23-04-2016 LT40_RS13430 b993ad03c0c2d2d3d4d781466ea8e5a1 356 PIRSF PIRSF029693 1 356 5.1E-202 T 23-04-2016 IPR016936 Uncharacterised conserved protein UCP029693 LT40_RS13430 b993ad03c0c2d2d3d4d781466ea8e5a1 356 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 36 356 7.3E-158 T 23-04-2016 IPR016936 Uncharacterised conserved protein UCP029693 LT40_RS14550 e13dfd94a4e52ae6e077a042bdc8c1da 317 PANTHER PTHR21621:SF4 1 317 7.8E-158 T 23-04-2016 LT40_RS14550 e13dfd94a4e52ae6e077a042bdc8c1da 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 5.8E-78 T 23-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 LT40_RS14550 e13dfd94a4e52ae6e077a042bdc8c1da 317 Gene3D G3DSA:3.40.50.20 4 130 1.4E-50 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS14550 e13dfd94a4e52ae6e077a042bdc8c1da 317 SUPERFAMILY SSF56059 124 313 9.9E-58 T 23-04-2016 LT40_RS14550 e13dfd94a4e52ae6e077a042bdc8c1da 317 SUPERFAMILY SSF52440 3 123 4.6E-42 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS14550 e13dfd94a4e52ae6e077a042bdc8c1da 317 Gene3D G3DSA:3.30.470.20 193 301 7.6E-49 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS14550 e13dfd94a4e52ae6e077a042bdc8c1da 317 PANTHER PTHR21621 1 317 7.8E-158 T 23-04-2016 LT40_RS14550 e13dfd94a4e52ae6e077a042bdc8c1da 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 4 313 5.3E-134 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 LT40_RS14550 e13dfd94a4e52ae6e077a042bdc8c1da 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 172.624 T 23-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 LT40_RS14550 e13dfd94a4e52ae6e077a042bdc8c1da 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 4 121 2.1E-42 T 23-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 LT40_RS14550 e13dfd94a4e52ae6e077a042bdc8c1da 317 Gene3D G3DSA:3.30.1490.20 138 192 2.6E-28 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS13390 0ca308d435d0a476cda800bb973223d6 770 Pfam PF00912 Transglycosylase 50 216 1.5E-49 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 LT40_RS13390 0ca308d435d0a476cda800bb973223d6 770 Pfam PF00905 Penicillin binding protein transpeptidase domain 292 413 1.6E-9 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LT40_RS13390 0ca308d435d0a476cda800bb973223d6 770 Gene3D G3DSA:3.40.710.10 220 613 1.7E-61 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS13390 0ca308d435d0a476cda800bb973223d6 770 SUPERFAMILY SSF53955 31 248 3.09E-64 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS13390 0ca308d435d0a476cda800bb973223d6 770 PANTHER PTHR32282 29 671 2.7E-184 T 23-04-2016 LT40_RS13390 0ca308d435d0a476cda800bb973223d6 770 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 686 765 1.2E-10 T 23-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 LT40_RS13390 0ca308d435d0a476cda800bb973223d6 770 SUPERFAMILY SSF56601 198 630 2.62E-88 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS13390 0ca308d435d0a476cda800bb973223d6 770 Gene3D G3DSA:1.10.3810.10 48 219 1.8E-52 T 23-04-2016 LT40_RS13390 0ca308d435d0a476cda800bb973223d6 770 PANTHER PTHR32282:SF0 29 671 2.7E-184 T 23-04-2016 LT40_RS13390 0ca308d435d0a476cda800bb973223d6 770 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 31 768 3.5E-230 T 23-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 LT40_RS09860 d303db6b5ea95c82e07e08ee2797f9be 372 SUPERFAMILY SSF53756 36 299 4.9E-6 T 23-04-2016 LT40_RS09860 d303db6b5ea95c82e07e08ee2797f9be 372 Gene3D G3DSA:3.40.50.2000 198 317 8.1E-5 T 23-04-2016 LT40_RS08195 1ad78023eea1bd2a939771426159d285 77 SUPERFAMILY SSF54292 2 76 8.39E-17 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS08195 1ad78023eea1bd2a939771426159d285 77 Gene3D G3DSA:3.10.20.30 6 70 1.4E-10 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS08195 1ad78023eea1bd2a939771426159d285 77 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 76 4.1E-19 T 23-04-2016 LT40_RS17935 53e15ebc8b39fae058e8ef6b191e2ea8 371 Gene3D G3DSA:3.40.640.10 14 237 1.7E-62 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS17935 53e15ebc8b39fae058e8ef6b191e2ea8 371 SUPERFAMILY SSF53383 4 354 1.46E-79 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS17935 53e15ebc8b39fae058e8ef6b191e2ea8 371 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 353 2.2E-83 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LT40_RS17935 53e15ebc8b39fae058e8ef6b191e2ea8 371 PANTHER PTHR30244 1 360 5.4E-110 T 23-04-2016 LT40_RS17935 53e15ebc8b39fae058e8ef6b191e2ea8 371 PANTHER PTHR30244:SF9 1 360 5.4E-110 T 23-04-2016 LT40_RS17935 53e15ebc8b39fae058e8ef6b191e2ea8 371 Gene3D G3DSA:3.90.1150.10 241 353 5.4E-14 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS17935 53e15ebc8b39fae058e8ef6b191e2ea8 371 PIRSF PIRSF000390 1 359 2.9E-90 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase LT40_RS06135 6d8ba8148623e0a97af41d410928c6a3 358 SUPERFAMILY SSF100950 9 346 1.0E-89 T 23-04-2016 LT40_RS06135 6d8ba8148623e0a97af41d410928c6a3 358 Gene3D G3DSA:3.40.50.10470 166 348 3.1E-55 T 23-04-2016 LT40_RS06135 6d8ba8148623e0a97af41d410928c6a3 358 Pfam PF01008 Initiation factor 2 subunit family 54 341 4.8E-59 T 23-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 LT40_RS06135 6d8ba8148623e0a97af41d410928c6a3 358 PANTHER PTHR10233 9 343 6.9E-108 T 23-04-2016 LT40_RS06135 6d8ba8148623e0a97af41d410928c6a3 358 Gene3D G3DSA:1.20.120.420 11 165 8.6E-34 T 23-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 LT40_RS06135 6d8ba8148623e0a97af41d410928c6a3 358 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 44 341 6.3E-78 T 23-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 LT40_RS06135 6d8ba8148623e0a97af41d410928c6a3 358 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 12 341 7.6E-108 T 23-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 LT40_RS06135 6d8ba8148623e0a97af41d410928c6a3 358 PANTHER PTHR10233:SF6 9 343 6.9E-108 T 23-04-2016 LT40_RS19480 8cbe2b9d65280fa5e515bec3c2c75ab2 158 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 7 121 1.1E-24 T 23-04-2016 IPR013362 Pilus modification type IV, PilV LT40_RS19480 8cbe2b9d65280fa5e515bec3c2c75ab2 158 Pfam PF13633 Prokaryotic N-terminal methylation site 11 31 3.1E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site LT40_RS19480 8cbe2b9d65280fa5e515bec3c2c75ab2 158 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site LT40_RS19480 8cbe2b9d65280fa5e515bec3c2c75ab2 158 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 1.0E-4 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site LT40_RS03945 6f4e1efc2f0572c89b772a800cdbaf94 404 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 277 379 9.0E-43 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 LT40_RS03945 6f4e1efc2f0572c89b772a800cdbaf94 404 PIRSF PIRSF038885 1 403 7.8E-156 T 23-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 LT40_RS03945 6f4e1efc2f0572c89b772a800cdbaf94 404 SUPERFAMILY SSF81648 281 390 1.96E-30 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 LT40_RS03945 6f4e1efc2f0572c89b772a800cdbaf94 404 PANTHER PTHR19271 1 404 2.3E-245 T 23-04-2016 LT40_RS03945 6f4e1efc2f0572c89b772a800cdbaf94 404 SUPERFAMILY SSF81342 16 279 1.33E-94 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 LT40_RS03945 6f4e1efc2f0572c89b772a800cdbaf94 404 Gene3D G3DSA:1.20.810.10 6 397 5.0E-158 T 23-04-2016 IPR027387 Cytochrome b/b6-like domain LT40_RS03945 6f4e1efc2f0572c89b772a800cdbaf94 404 PANTHER PTHR19271:SF9 1 404 2.3E-245 T 23-04-2016 LT40_RS03945 6f4e1efc2f0572c89b772a800cdbaf94 404 Pfam PF00033 Cytochrome b/b6/petB 23 211 3.5E-67 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 LT40_RS15685 b820d040ff12105776c7fd114c1ff8f8 202 Gene3D G3DSA:1.10.760.10 112 201 2.0E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15685 b820d040ff12105776c7fd114c1ff8f8 202 Pfam PF00034 Cytochrome c 29 103 2.6E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15685 b820d040ff12105776c7fd114c1ff8f8 202 Pfam PF00034 Cytochrome c 117 201 9.6E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15685 b820d040ff12105776c7fd114c1ff8f8 202 PANTHER PTHR33751:SF3 26 202 1.9E-49 T 23-04-2016 LT40_RS15685 b820d040ff12105776c7fd114c1ff8f8 202 Gene3D G3DSA:1.10.760.10 33 104 1.2E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15685 b820d040ff12105776c7fd114c1ff8f8 202 SUPERFAMILY SSF46626 36 105 2.56E-18 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15685 b820d040ff12105776c7fd114c1ff8f8 202 SUPERFAMILY SSF46626 108 200 1.38E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15685 b820d040ff12105776c7fd114c1ff8f8 202 PANTHER PTHR33751 26 202 1.9E-49 T 23-04-2016 LT40_RS15685 b820d040ff12105776c7fd114c1ff8f8 202 PIRSF PIRSF000005 1 202 1.3E-54 T 23-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 LT40_RS11470 2ca3c811120e93e7e41f24b4a0739eb6 411 SUPERFAMILY SSF102114 122 381 1.65E-26 T 23-04-2016 LT40_RS11470 2ca3c811120e93e7e41f24b4a0739eb6 411 Gene3D G3DSA:3.20.20.70 122 381 2.6E-24 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS11470 2ca3c811120e93e7e41f24b4a0739eb6 411 Pfam PF04055 Radical SAM superfamily 126 269 8.8E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS11470 2ca3c811120e93e7e41f24b4a0739eb6 411 Pfam PF13353 4Fe-4S single cluster domain 123 207 5.1E-6 T 23-04-2016 LT40_RS11470 2ca3c811120e93e7e41f24b4a0739eb6 411 TIGRFAM TIGR03977 rSAM_pair_HxsC: His-Xaa-Ser system radical SAM maturase HxsC 96 386 6.2E-115 T 23-04-2016 IPR024032 His-Xaa-Ser system radical SAM maturase HxsC LT40_RS07605 b48829a7d0cacf2ad55194e3adb4ba4f 232 SMART SM00382 29 223 7.8E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS07605 b48829a7d0cacf2ad55194e3adb4ba4f 232 PANTHER PTHR24220 24 212 1.2E-51 T 23-04-2016 LT40_RS07605 b48829a7d0cacf2ad55194e3adb4ba4f 232 Gene3D G3DSA:3.40.50.300 1 211 2.6E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07605 b48829a7d0cacf2ad55194e3adb4ba4f 232 Pfam PF00005 ABC transporter 24 174 1.3E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS07605 b48829a7d0cacf2ad55194e3adb4ba4f 232 SUPERFAMILY SSF52540 1 213 7.78E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 SMART SM00283 279 540 1.7E-63 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 Pfam PF00672 HAMP domain 193 258 1.9E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 PANTHER PTHR32089 181 541 3.8E-114 T 23-04-2016 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 539 2.6E-47 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 SMART SM00304 212 264 4.2E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 PANTHER PTHR32089:SF64 181 541 3.8E-114 T 23-04-2016 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 Gene3D G3DSA:3.30.420.150 228 302 8.5E-4 T 23-04-2016 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 Gene3D G3DSA:1.10.287.950 303 510 1.0E-53 T 23-04-2016 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 7.1E-23 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 7.1E-23 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 7.1E-23 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 300 329 7.1E-23 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 SUPERFAMILY SSF58104 232 541 1.57E-69 T 23-04-2016 LT40_RS01510 cee8ce1d022308a8a42de43749e20614 541 Pfam PF02203 Tar ligand binding domain homologue 1 148 5.6E-11 T 23-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LT40_RS04485 2260ec58b7c685033a98c746b39441ed 244 PANTHER PTHR28047:SF1 1 234 1.4E-61 T 23-04-2016 LT40_RS04485 2260ec58b7c685033a98c746b39441ed 244 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 209 4.9E-11 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04485 2260ec58b7c685033a98c746b39441ed 244 PANTHER PTHR28047 1 234 1.4E-61 T 23-04-2016 LT40_RS14565 204329d99ea5b325da4d879a6c7df975 146 Gene3D G3DSA:3.30.420.140 6 140 2.9E-45 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LT40_RS14565 204329d99ea5b325da4d879a6c7df975 146 Pfam PF03652 Holliday junction resolvase 7 138 7.2E-42 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LT40_RS14565 204329d99ea5b325da4d879a6c7df975 146 PANTHER PTHR33317 7 138 1.7E-41 T 23-04-2016 LT40_RS14565 204329d99ea5b325da4d879a6c7df975 146 SUPERFAMILY SSF53098 6 138 1.67E-39 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS14565 204329d99ea5b325da4d879a6c7df975 146 SMART SM00732 5 105 4.2E-40 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LT40_RS14565 204329d99ea5b325da4d879a6c7df975 146 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 5 141 24.858 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LT40_RS14565 204329d99ea5b325da4d879a6c7df975 146 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 8 138 1.4E-43 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LT40_RS17600 3d62a8f6084e9ae2e57ce293ca2cc518 147 PANTHER PTHR10438:SF281 15 140 6.0E-32 T 23-04-2016 LT40_RS17600 3d62a8f6084e9ae2e57ce293ca2cc518 147 PRINTS PR00421 Thioredoxin family signature 67 76 3.0E-7 T 23-04-2016 LT40_RS17600 3d62a8f6084e9ae2e57ce293ca2cc518 147 PRINTS PR00421 Thioredoxin family signature 107 118 3.0E-7 T 23-04-2016 LT40_RS17600 3d62a8f6084e9ae2e57ce293ca2cc518 147 PRINTS PR00421 Thioredoxin family signature 59 67 3.0E-7 T 23-04-2016 LT40_RS17600 3d62a8f6084e9ae2e57ce293ca2cc518 147 ProSitePatterns PS00194 Thioredoxin family active site. 60 78 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LT40_RS17600 3d62a8f6084e9ae2e57ce293ca2cc518 147 Gene3D G3DSA:3.40.30.10 43 141 2.3E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS17600 3d62a8f6084e9ae2e57ce293ca2cc518 147 SUPERFAMILY SSF52833 27 141 1.41E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS17600 3d62a8f6084e9ae2e57ce293ca2cc518 147 PANTHER PTHR10438 15 140 6.0E-32 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LT40_RS17600 3d62a8f6084e9ae2e57ce293ca2cc518 147 Pfam PF00085 Thioredoxin 43 141 1.2E-23 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 LT40_RS16225 df9f00ca3d5aef9fcf5870a4d34a5333 288 PANTHER PTHR10534 1 288 3.6E-122 T 23-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LT40_RS16225 df9f00ca3d5aef9fcf5870a4d34a5333 288 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 6 285 2.1E-111 T 23-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LT40_RS16225 df9f00ca3d5aef9fcf5870a4d34a5333 288 SUPERFAMILY SSF53613 4 279 7.48E-70 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS16225 df9f00ca3d5aef9fcf5870a4d34a5333 288 PANTHER PTHR10534:SF0 1 288 3.6E-122 T 23-04-2016 LT40_RS16225 df9f00ca3d5aef9fcf5870a4d34a5333 288 Gene3D G3DSA:3.40.1190.20 3 286 1.5E-86 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS16225 df9f00ca3d5aef9fcf5870a4d34a5333 288 Pfam PF08543 Phosphomethylpyrimidine kinase 76 256 1.2E-12 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 LT40_RS16225 df9f00ca3d5aef9fcf5870a4d34a5333 288 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 4 288 53.011 T 23-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 LT40_RS03625 a3ff5c804c6e04e3974c5edc29aaaa6a 532 PANTHER PTHR30290 22 532 1.1E-199 T 23-04-2016 LT40_RS03625 a3ff5c804c6e04e3974c5edc29aaaa6a 532 PIRSF PIRSF002741 20 527 4.7E-114 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS03625 a3ff5c804c6e04e3974c5edc29aaaa6a 532 SUPERFAMILY SSF53850 27 529 5.79E-147 T 23-04-2016 LT40_RS03625 a3ff5c804c6e04e3974c5edc29aaaa6a 532 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 75 97 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site LT40_RS03625 a3ff5c804c6e04e3974c5edc29aaaa6a 532 PANTHER PTHR30290:SF14 22 532 1.1E-199 T 23-04-2016 LT40_RS03625 a3ff5c804c6e04e3974c5edc29aaaa6a 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 451 4.7E-99 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS03625 a3ff5c804c6e04e3974c5edc29aaaa6a 532 Gene3D G3DSA:3.10.105.10 290 501 6.9E-66 T 23-04-2016 LT40_RS03625 a3ff5c804c6e04e3974c5edc29aaaa6a 532 Gene3D G3DSA:3.90.76.10 36 215 2.2E-48 T 23-04-2016 LT40_RS15310 a104ff902058d4dbf4c8746826620482 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 214 2.1E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15310 a104ff902058d4dbf4c8746826620482 214 PANTHER PTHR30450:SF1 3 214 1.9E-110 T 23-04-2016 LT40_RS15310 a104ff902058d4dbf4c8746826620482 214 PANTHER PTHR30450 3 214 1.9E-110 T 23-04-2016 LT40_RS15310 a104ff902058d4dbf4c8746826620482 214 Gene3D G3DSA:1.10.3720.10 3 213 1.4E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15310 a104ff902058d4dbf4c8746826620482 214 SUPERFAMILY SSF161098 4 198 7.72E-48 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17155 dc25e568cf49db14f10ba333ec93f128 432 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 4 432 8.1E-218 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 LT40_RS17155 dc25e568cf49db14f10ba333ec93f128 432 PIRSF PIRSF000423 1 432 1.3E-192 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 LT40_RS17155 dc25e568cf49db14f10ba333ec93f128 432 Gene3D G3DSA:3.40.1160.10 21 280 1.8E-59 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS17155 dc25e568cf49db14f10ba333ec93f128 432 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 432 223.451 T 23-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 LT40_RS17155 dc25e568cf49db14f10ba333ec93f128 432 PANTHER PTHR30602 1 432 1.3E-250 T 23-04-2016 LT40_RS17155 dc25e568cf49db14f10ba333ec93f128 432 Gene3D G3DSA:3.40.630.30 287 428 2.3E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS17155 dc25e568cf49db14f10ba333ec93f128 432 Pfam PF00696 Amino acid kinase family 25 259 2.2E-18 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS17155 dc25e568cf49db14f10ba333ec93f128 432 SUPERFAMILY SSF53633 3 283 5.72E-63 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS17155 dc25e568cf49db14f10ba333ec93f128 432 SUPERFAMILY SSF55729 284 410 5.06E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS17155 dc25e568cf49db14f10ba333ec93f128 432 Pfam PF00583 Acetyltransferase (GNAT) family 331 403 2.3E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS17155 dc25e568cf49db14f10ba333ec93f128 432 PANTHER PTHR30602:SF3 1 432 1.3E-250 T 23-04-2016 LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 Gene3D G3DSA:1.10.10.10 6 85 1.5E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 SUPERFAMILY SSF53850 95 304 4.34E-35 T 23-04-2016 LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 TIGRFAM TIGR02424 TF_pcaQ: pca operon transcription factor PcaQ 5 303 7.5E-114 T 23-04-2016 IPR012787 Pca transcription factor PcaQ GO:0003677|GO:0019619|GO:0045893 LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 Gene3D G3DSA:3.40.190.10 187 267 1.7E-12 T 23-04-2016 LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.2E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 SUPERFAMILY SSF46785 5 116 6.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 PANTHER PTHR30346:SF11 7 303 7.2E-153 T 23-04-2016 LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 PANTHER PTHR30346 7 303 7.2E-153 T 23-04-2016 LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.9E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.9E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.9E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 Gene3D G3DSA:3.40.190.10 97 186 1.8E-18 T 23-04-2016 LT40_RS05690 082e254918dc26590d84435ab84d6c65 311 Pfam PF03466 LysR substrate binding domain 95 301 1.7E-34 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS17525 f806047fb8479dffa12a9eb48fef68ce 406 SUPERFAMILY SSF52467 278 393 3.87E-32 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS17525 f806047fb8479dffa12a9eb48fef68ce 406 SUPERFAMILY SSF52402 91 216 1.05E-18 T 23-04-2016 LT40_RS17525 f806047fb8479dffa12a9eb48fef68ce 406 Gene3D G3DSA:3.40.50.620 91 215 3.7E-12 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS17525 f806047fb8479dffa12a9eb48fef68ce 406 PANTHER PTHR10909:SF294 285 350 1.2E-12 T 23-04-2016 LT40_RS17525 f806047fb8479dffa12a9eb48fef68ce 406 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 279 354 2.8E-23 T 23-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal LT40_RS17525 f806047fb8479dffa12a9eb48fef68ce 406 PANTHER PTHR10909 285 350 1.2E-12 T 23-04-2016 LT40_RS17525 f806047fb8479dffa12a9eb48fef68ce 406 Pfam PF01012 Electron transfer flavoprotein domain 99 240 2.3E-14 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 LT40_RS17525 f806047fb8479dffa12a9eb48fef68ce 406 Gene3D G3DSA:3.40.50.1220 273 395 6.2E-36 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS17525 f806047fb8479dffa12a9eb48fef68ce 406 SMART SM00893 91 271 5.9E-4 T 23-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 LT40_RS07335 a9e9d6e6d0c04a33f98a6cd3cc9b30ef 257 PANTHER PTHR11941:SF54 1 254 2.8E-116 T 23-04-2016 LT40_RS07335 a9e9d6e6d0c04a33f98a6cd3cc9b30ef 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 256 1.4E-81 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LT40_RS07335 a9e9d6e6d0c04a33f98a6cd3cc9b30ef 257 Gene3D G3DSA:3.90.226.10 1 255 5.6E-97 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS07335 a9e9d6e6d0c04a33f98a6cd3cc9b30ef 257 SUPERFAMILY SSF52096 2 256 1.46E-90 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS07335 a9e9d6e6d0c04a33f98a6cd3cc9b30ef 257 PANTHER PTHR11941 1 254 2.8E-116 T 23-04-2016 LT40_RS07335 a9e9d6e6d0c04a33f98a6cd3cc9b30ef 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 LT40_RS09635 698f5152dd30f16d5bd134af43945dcc 354 SUPERFAMILY SSF50331 239 350 1.26E-15 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS09635 698f5152dd30f16d5bd134af43945dcc 354 PANTHER PTHR24220 6 341 1.1E-126 T 23-04-2016 LT40_RS09635 698f5152dd30f16d5bd134af43945dcc 354 Pfam PF08402 TOBE domain 277 348 2.1E-15 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LT40_RS09635 698f5152dd30f16d5bd134af43945dcc 354 PANTHER PTHR24220:SF150 6 341 1.1E-126 T 23-04-2016 LT40_RS09635 698f5152dd30f16d5bd134af43945dcc 354 SMART SM00382 29 212 4.3E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS09635 698f5152dd30f16d5bd134af43945dcc 354 Gene3D G3DSA:3.40.50.300 3 235 3.3E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09635 698f5152dd30f16d5bd134af43945dcc 354 Pfam PF00005 ABC transporter 21 162 2.3E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS09635 698f5152dd30f16d5bd134af43945dcc 354 Gene3D G3DSA:2.40.50.140 280 340 5.4E-6 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS09635 698f5152dd30f16d5bd134af43945dcc 354 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS09635 698f5152dd30f16d5bd134af43945dcc 354 SUPERFAMILY SSF52540 5 241 8.47E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03805 e6ed4dba483c2b859645e368cdcfa3fb 190 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 15 188 8.1E-51 T 23-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related LT40_RS03805 e6ed4dba483c2b859645e368cdcfa3fb 190 PANTHER PTHR37481 3 190 2.5E-46 T 23-04-2016 LT40_RS03805 e6ed4dba483c2b859645e368cdcfa3fb 190 PANTHER PTHR37481:SF1 3 190 2.5E-46 T 23-04-2016 LT40_RS03805 e6ed4dba483c2b859645e368cdcfa3fb 190 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 6 190 24.954 T 23-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 LT40_RS03805 e6ed4dba483c2b859645e368cdcfa3fb 190 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 10 187 2.3E-49 T 23-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 LT40_RS07350 9ed9ae1ea7abf45ffb812d6e10ec6854 266 Gene3D G3DSA:3.40.50.300 3 221 4.0E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07350 9ed9ae1ea7abf45ffb812d6e10ec6854 266 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS07350 9ed9ae1ea7abf45ffb812d6e10ec6854 266 PANTHER PTHR24220:SF361 6 258 8.4E-120 T 23-04-2016 LT40_RS07350 9ed9ae1ea7abf45ffb812d6e10ec6854 266 PANTHER PTHR24220 6 258 8.4E-120 T 23-04-2016 LT40_RS07350 9ed9ae1ea7abf45ffb812d6e10ec6854 266 SMART SM00382 33 216 3.8E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS07350 9ed9ae1ea7abf45ffb812d6e10ec6854 266 Pfam PF00005 ABC transporter 24 166 3.2E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS07350 9ed9ae1ea7abf45ffb812d6e10ec6854 266 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 9.2E-106 T 23-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 LT40_RS07350 9ed9ae1ea7abf45ffb812d6e10ec6854 266 SUPERFAMILY SSF52540 5 226 8.57E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20100 2d97dd24c3c9b38fe6c32e1a2876fa42 146 PIRSF PIRSF029598 1 143 4.0E-45 T 23-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 LT40_RS20100 2d97dd24c3c9b38fe6c32e1a2876fa42 146 PANTHER PTHR37819:SF1 8 146 9.3E-39 T 23-04-2016 LT40_RS20100 2d97dd24c3c9b38fe6c32e1a2876fa42 146 Pfam PF06146 Phosphate-starvation-inducible E 58 124 8.9E-17 T 23-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like LT40_RS20100 2d97dd24c3c9b38fe6c32e1a2876fa42 146 PANTHER PTHR37819 8 146 9.3E-39 T 23-04-2016 LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 Gene3D G3DSA:3.20.20.80 169 590 1.1E-118 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 Gene3D G3DSA:2.60.40.10 18 168 2.2E-56 T 23-04-2016 IPR013783 Immunoglobulin-like fold LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 SUPERFAMILY SSF51445 152 484 1.38E-128 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 SUPERFAMILY SSF51445 513 589 1.38E-128 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 SUPERFAMILY SSF81296 18 162 2.1E-50 T 23-04-2016 IPR014756 Immunoglobulin E-set LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 PANTHER PTHR10357 1 592 0.0 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 PANTHER PTHR10357 621 710 0.0 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 PANTHER PTHR10357:SF74 1 592 0.0 T 23-04-2016 LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 PANTHER PTHR10357:SF74 621 710 0.0 T 23-04-2016 LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 Pfam PF00128 Alpha amylase, catalytic domain 205 307 3.6E-7 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 SUPERFAMILY SSF51011 601 709 2.88E-25 T 23-04-2016 LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 22 110 2.5E-19 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 18 709 0.0 T 23-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 Gene3D G3DSA:2.60.40.1180 602 709 1.5E-28 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta LT40_RS12460 ef26b109c7367952e74e439fe0e6e1fe 719 SMART SM00642 175 581 1.2E-7 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Pfam PF00575 S1 RNA binding domain 450 520 2.0E-13 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Pfam PF00575 S1 RNA binding domain 19 85 5.1E-7 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Pfam PF00575 S1 RNA binding domain 189 260 2.2E-21 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Pfam PF00575 S1 RNA binding domain 361 434 2.2E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Pfam PF00575 S1 RNA binding domain 103 171 2.7E-11 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Pfam PF00575 S1 RNA binding domain 278 347 4.7E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Gene3D G3DSA:2.40.50.140 280 360 2.6E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Gene3D G3DSA:2.40.50.140 21 99 1.3E-9 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Gene3D G3DSA:2.40.50.140 192 279 1.5E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SUPERFAMILY SSF50249 429 534 3.06E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SUPERFAMILY SSF50249 1 112 2.34E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PIRSF PIRSF002111 1 534 4.2E-213 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SMART SM00316 275 347 1.1E-24 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SMART SM00316 19 87 2.5E-5 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SMART SM00316 362 434 5.8E-20 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SMART SM00316 449 520 1.9E-18 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SMART SM00316 190 260 1.0E-28 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SMART SM00316 103 171 2.0E-8 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SUPERFAMILY SSF50249 342 440 1.27E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Gene3D G3DSA:2.40.50.140 361 436 1.3E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Gene3D G3DSA:2.40.50.140 100 172 2.3E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 Gene3D G3DSA:2.40.50.140 446 520 3.7E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PRINTS PR00681 Ribosomal protein S1 signature 126 143 1.6E-88 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PRINTS PR00681 Ribosomal protein S1 signature 21 39 1.6E-88 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PRINTS PR00681 Ribosomal protein S1 signature 39 53 1.6E-88 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PRINTS PR00681 Ribosomal protein S1 signature 290 309 1.6E-88 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PRINTS PR00681 Ribosomal protein S1 signature 108 124 1.6E-88 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PRINTS PR00681 Ribosomal protein S1 signature 84 103 1.6E-88 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PRINTS PR00681 Ribosomal protein S1 signature 212 233 1.6E-88 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PRINTS PR00681 Ribosomal protein S1 signature 330 348 1.6E-88 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PRINTS PR00681 Ribosomal protein S1 signature 155 175 1.6E-88 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.4E-216 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SUPERFAMILY SSF50249 189 275 4.55E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PANTHER PTHR10724 1 514 1.9E-267 T 23-04-2016 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SUPERFAMILY SSF50249 255 356 3.8E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 PANTHER PTHR10724:SF6 1 514 1.9E-267 T 23-04-2016 LT40_RS06170 ddb0cd627f11ef13bb5051c81a113785 562 SUPERFAMILY SSF50249 105 185 1.34E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS10475 c97e52343a753439e04744c94f0c3bce 441 PIRSF PIRSF000337 3 438 1.1E-136 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LT40_RS10475 c97e52343a753439e04744c94f0c3bce 441 PANTHER PTHR30011:SF18 1 432 4.6E-150 T 23-04-2016 LT40_RS10475 c97e52343a753439e04744c94f0c3bce 441 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 428 3.0E-151 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LT40_RS10475 c97e52343a753439e04744c94f0c3bce 441 Pfam PF00296 Luciferase-like monooxygenase 35 384 2.5E-58 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS10475 c97e52343a753439e04744c94f0c3bce 441 SUPERFAMILY SSF51679 3 435 6.93E-120 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS10475 c97e52343a753439e04744c94f0c3bce 441 PANTHER PTHR30011 1 432 4.6E-150 T 23-04-2016 LT40_RS10475 c97e52343a753439e04744c94f0c3bce 441 Gene3D G3DSA:3.20.20.30 349 435 1.8E-121 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS10475 c97e52343a753439e04744c94f0c3bce 441 Gene3D G3DSA:3.20.20.30 2 305 1.8E-121 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 428 2.9E-60 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 430 1.5E-125 T 23-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 Gene3D G3DSA:1.10.940.10 1 144 1.4E-42 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 PANTHER PTHR22807:SF30 28 431 6.2E-116 T 23-04-2016 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 SUPERFAMILY SSF48013 1 146 4.58E-35 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 PANTHER PTHR22807 28 431 6.2E-116 T 23-04-2016 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 314 325 - T 23-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 Gene3D G3DSA:1.10.287.730 145 169 4.5E-12 T 23-04-2016 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 Gene3D G3DSA:3.40.50.150 229 430 6.8E-51 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 Pfam PF01029 NusB family 1 123 1.2E-23 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 365 381 1.4E-26 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.4E-26 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.4E-26 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 315 327 1.4E-26 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 413 430 1.4E-26 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 Gene3D G3DSA:3.30.70.1170 170 227 2.4E-24 T 23-04-2016 LT40_RS15970 6f6ce035618a0a7b729b1398c6d1c983 437 SUPERFAMILY SSF53335 134 431 3.95E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 SUPERFAMILY SSF54919 1 138 8.9E-55 T 23-04-2016 LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.138 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 PANTHER PTHR11349 1 138 1.2E-69 T 23-04-2016 LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 23-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.37E-39 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.37E-39 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.37E-39 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.37E-39 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.37E-39 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 SMART SM00562 3 140 1.3E-82 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.1E-53 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 LT40_RS03525 f7e7668fda0440ab2b89052045087333 141 Gene3D G3DSA:3.30.70.141 1 138 3.9E-57 T 23-04-2016 LT40_RS11485 2a606f81178788400950b043537eee46 327 PANTHER PTHR11019 145 322 3.7E-41 T 23-04-2016 LT40_RS11485 2a606f81178788400950b043537eee46 327 PANTHER PTHR11019 47 122 3.7E-41 T 23-04-2016 LT40_RS11485 2a606f81178788400950b043537eee46 327 SMART SM00342 231 314 2.4E-27 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS11485 2a606f81178788400950b043537eee46 327 Gene3D G3DSA:1.10.10.60 212 268 7.5E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS11485 2a606f81178788400950b043537eee46 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 298 314 1.6E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS11485 2a606f81178788400950b043537eee46 327 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 283 298 1.6E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS11485 2a606f81178788400950b043537eee46 327 Pfam PF12852 Cupin 11 199 1.7E-27 T 23-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain LT40_RS11485 2a606f81178788400950b043537eee46 327 Gene3D G3DSA:1.10.10.60 269 318 6.5E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS11485 2a606f81178788400950b043537eee46 327 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 268 310 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS11485 2a606f81178788400950b043537eee46 327 Pfam PF12833 Helix-turn-helix domain 237 314 2.0E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS11485 2a606f81178788400950b043537eee46 327 SUPERFAMILY SSF46689 214 265 8.96E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS11485 2a606f81178788400950b043537eee46 327 PANTHER PTHR11019:SF77 145 322 3.7E-41 T 23-04-2016 LT40_RS11485 2a606f81178788400950b043537eee46 327 PANTHER PTHR11019:SF77 47 122 3.7E-41 T 23-04-2016 LT40_RS11485 2a606f81178788400950b043537eee46 327 SUPERFAMILY SSF46689 267 317 7.17E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS03740 0da30bf24237fa6281a9ef224a3c98fd 448 PANTHER PTHR30624 7 448 9.1E-180 T 23-04-2016 LT40_RS03740 0da30bf24237fa6281a9ef224a3c98fd 448 PANTHER PTHR30624:SF1 7 448 9.1E-180 T 23-04-2016 LT40_RS03740 0da30bf24237fa6281a9ef224a3c98fd 448 SUPERFAMILY SSF111283 15 447 1.19E-126 T 23-04-2016 LT40_RS03740 0da30bf24237fa6281a9ef224a3c98fd 448 Pfam PF01523 Putative modulator of DNA gyrase 34 325 1.2E-53 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS16080 dfe248b9296408d3a9cb5deba009adc2 263 Pfam PF13614 AAA domain 3 178 5.1E-63 T 23-04-2016 IPR025669 AAA domain LT40_RS16080 dfe248b9296408d3a9cb5deba009adc2 263 PANTHER PTHR13696:SF52 1 261 8.1E-89 T 23-04-2016 LT40_RS16080 dfe248b9296408d3a9cb5deba009adc2 263 PANTHER PTHR13696 1 261 8.1E-89 T 23-04-2016 LT40_RS16080 dfe248b9296408d3a9cb5deba009adc2 263 Gene3D G3DSA:3.40.50.300 3 256 7.8E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16080 dfe248b9296408d3a9cb5deba009adc2 263 SUPERFAMILY SSF52540 1 253 1.53E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04405 4f505aed87aa5dfde95d00b67da28f36 307 SUPERFAMILY SSF46689 201 251 3.19E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS04405 4f505aed87aa5dfde95d00b67da28f36 307 Pfam PF12833 Helix-turn-helix domain 223 297 6.8E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS04405 4f505aed87aa5dfde95d00b67da28f36 307 Gene3D G3DSA:1.10.10.60 255 296 1.9E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS04405 4f505aed87aa5dfde95d00b67da28f36 307 Pfam PF06719 AraC-type transcriptional regulator N-terminus 37 188 5.2E-46 T 23-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal LT40_RS04405 4f505aed87aa5dfde95d00b67da28f36 307 Gene3D G3DSA:1.10.10.60 198 254 1.1E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS04405 4f505aed87aa5dfde95d00b67da28f36 307 SUPERFAMILY SSF46689 253 298 1.03E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS04405 4f505aed87aa5dfde95d00b67da28f36 307 SMART SM00342 217 300 3.2E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS04405 4f505aed87aa5dfde95d00b67da28f36 307 PANTHER PTHR11019:SF81 38 306 5.9E-84 T 23-04-2016 LT40_RS04405 4f505aed87aa5dfde95d00b67da28f36 307 PANTHER PTHR11019 38 306 5.9E-84 T 23-04-2016 LT40_RS00970 56e45d6460ac8bce48d006c3cf006c9a 208 SUPERFAMILY SSF51366 5 204 2.04E-61 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LT40_RS00970 56e45d6460ac8bce48d006c3cf006c9a 208 PANTHER PTHR22854 7 205 1.3E-67 T 23-04-2016 LT40_RS00970 56e45d6460ac8bce48d006c3cf006c9a 208 PANTHER PTHR22854:SF6 7 205 1.3E-67 T 23-04-2016 LT40_RS00970 56e45d6460ac8bce48d006c3cf006c9a 208 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 201 1.0E-46 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 LT40_RS00970 56e45d6460ac8bce48d006c3cf006c9a 208 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 206 41.449 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 LT40_RS00970 56e45d6460ac8bce48d006c3cf006c9a 208 Gene3D G3DSA:3.20.20.70 6 205 2.9E-70 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS01800 b6e92baa105ba2d786efcb70f797f1dd 281 PANTHER PTHR10060:SF13 1 266 3.2E-149 T 23-04-2016 LT40_RS01800 b6e92baa105ba2d786efcb70f797f1dd 281 Gene3D G3DSA:3.20.20.140 1 264 6.9E-80 T 23-04-2016 LT40_RS01800 b6e92baa105ba2d786efcb70f797f1dd 281 PIRSF PIRSF005902 1 267 1.9E-64 T 23-04-2016 IPR001130 TatD family GO:0016788 LT40_RS01800 b6e92baa105ba2d786efcb70f797f1dd 281 PANTHER PTHR10060 1 266 3.2E-149 T 23-04-2016 IPR001130 TatD family GO:0016788 LT40_RS01800 b6e92baa105ba2d786efcb70f797f1dd 281 Pfam PF01026 TatD related DNase 4 262 1.6E-60 T 23-04-2016 IPR001130 TatD family GO:0016788 LT40_RS01800 b6e92baa105ba2d786efcb70f797f1dd 281 SUPERFAMILY SSF51556 3 264 4.82E-76 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS14335 104bec26a32b5c3eef20b417cdaa56f0 262 PANTHER PTHR30371 2 262 1.5E-110 T 23-04-2016 LT40_RS14335 104bec26a32b5c3eef20b417cdaa56f0 262 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 230 3.7E-75 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LT40_RS14335 104bec26a32b5c3eef20b417cdaa56f0 262 Pfam PF00902 Sec-independent protein translocase protein (TatC) 16 225 8.9E-64 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LT40_RS14335 104bec26a32b5c3eef20b417cdaa56f0 262 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 243 18.303 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LT40_RS14335 104bec26a32b5c3eef20b417cdaa56f0 262 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 3.7E-49 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LT40_RS14335 104bec26a32b5c3eef20b417cdaa56f0 262 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 3.7E-49 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LT40_RS14335 104bec26a32b5c3eef20b417cdaa56f0 262 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 3.7E-49 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LT40_RS14335 104bec26a32b5c3eef20b417cdaa56f0 262 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 3.7E-49 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LT40_RS14335 104bec26a32b5c3eef20b417cdaa56f0 262 PANTHER PTHR30371:SF0 2 262 1.5E-110 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 LT40_RS14335 104bec26a32b5c3eef20b417cdaa56f0 262 ProSitePatterns PS01218 TatC family signature. 158 177 - T 23-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site LT40_RS07930 b8ed264783a9f600880796a09576125e 207 Gene3D G3DSA:1.10.357.10 71 201 3.3E-34 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS07930 b8ed264783a9f600880796a09576125e 207 PANTHER PTHR30055:SF34 1 201 3.5E-44 T 23-04-2016 LT40_RS07930 b8ed264783a9f600880796a09576125e 207 Gene3D G3DSA:1.10.10.60 2 69 1.2E-22 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS07930 b8ed264783a9f600880796a09576125e 207 PANTHER PTHR30055 1 201 3.5E-44 T 23-04-2016 LT40_RS07930 b8ed264783a9f600880796a09576125e 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 7.5E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS07930 b8ed264783a9f600880796a09576125e 207 SUPERFAMILY SSF48498 84 200 8.16E-20 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LT40_RS07930 b8ed264783a9f600880796a09576125e 207 SUPERFAMILY SSF46689 3 86 2.51E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 Pfam PF02254 TrkA-N domain 3 108 2.1E-26 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 Pfam PF02254 TrkA-N domain 234 349 4.6E-24 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 Pfam PF02080 TrkA-C domain 390 450 5.5E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 Pfam PF02080 TrkA-C domain 155 224 1.4E-13 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 SUPERFAMILY SSF116726 135 222 8.11E-13 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 SUPERFAMILY SSF51735 1 150 3.0E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 Gene3D G3DSA:3.30.70.1450 154 224 1.2E-6 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 Gene3D G3DSA:3.30.70.1450 390 436 2.6E-6 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 Gene3D G3DSA:3.40.50.720 1 151 1.6E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 Gene3D G3DSA:3.40.50.720 231 375 6.3E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 1.1E-30 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 1.1E-30 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.1E-30 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 1.1E-30 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.1E-30 T 23-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 PANTHER PTHR13789 1 169 2.3E-91 T 23-04-2016 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 PANTHER PTHR13789 415 439 2.3E-91 T 23-04-2016 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 SUPERFAMILY SSF116726 361 437 2.88E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 PANTHER PTHR13789:SF225 1 169 2.3E-91 T 23-04-2016 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 PANTHER PTHR13789:SF225 415 439 2.3E-91 T 23-04-2016 LT40_RS15975 b1c4fb75c80a3be35df83cf0bcd574f3 457 SUPERFAMILY SSF51735 231 375 4.64E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 SUPERFAMILY SSF52540 546 853 3.35E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 5.4E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 Gene3D G3DSA:3.40.50.300 160 342 6.6E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 PANTHER PTHR11638 1 853 0.0 T 23-04-2016 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 PANTHER PTHR11638:SF18 1 853 0.0 T 23-04-2016 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 853 0.0 T 23-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 Gene3D G3DSA:3.40.50.300 550 775 6.3E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 SUPERFAMILY SSF81923 4 156 6.15E-38 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.0E-8 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 4.5E-10 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 2.0E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 2.0E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 2.0E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 2.0E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 Gene3D G3DSA:1.10.8.60 776 853 9.1E-30 T 23-04-2016 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 SMART SM00382 597 753 9.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 SMART SM00382 198 343 2.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 SMART SM01086 764 853 2.1E-38 T 23-04-2016 IPR019489 Clp ATPase, C-terminal LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 758 3.2E-55 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 Gene3D G3DSA:1.10.8.60 344 428 1.7E-36 T 23-04-2016 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 SUPERFAMILY SSF52540 159 545 2.84E-98 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 Gene3D G3DSA:1.10.1780.10 1 147 3.7E-40 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 LT40_RS19540 e50e5397cf1e17c9057b8e3e5944a615 854 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 843 2.7E-25 T 23-04-2016 IPR019489 Clp ATPase, C-terminal LT40_RS05000 ecc60c68febf51a6728cfa4394af4db6 229 PANTHER PTHR11587 4 228 7.6E-113 T 23-04-2016 LT40_RS05000 ecc60c68febf51a6728cfa4394af4db6 229 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 9 226 56.591 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 LT40_RS05000 ecc60c68febf51a6728cfa4394af4db6 229 PIRSF PIRSF006293 7 229 3.3E-81 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 LT40_RS05000 ecc60c68febf51a6728cfa4394af4db6 229 PANTHER PTHR11587:SF3 4 228 7.6E-113 T 23-04-2016 LT40_RS05000 ecc60c68febf51a6728cfa4394af4db6 229 Gene3D G3DSA:3.40.50.620 8 228 9.9E-81 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS05000 ecc60c68febf51a6728cfa4394af4db6 229 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 11 213 1.9E-64 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 LT40_RS05000 ecc60c68febf51a6728cfa4394af4db6 229 Pfam PF06508 Queuosine biosynthesis protein QueC 10 220 1.9E-81 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 LT40_RS05000 ecc60c68febf51a6728cfa4394af4db6 229 SUPERFAMILY SSF52402 9 228 3.75E-65 T 23-04-2016 LT40_RS08135 6e45c27d03410a67e05aa393a32b8bc6 146 PANTHER PTHR10057 1 146 7.0E-29 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 LT40_RS08135 6e45c27d03410a67e05aa393a32b8bc6 146 Pfam PF03073 TspO/MBR family 6 142 3.6E-36 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 LT40_RS08135 6e45c27d03410a67e05aa393a32b8bc6 146 PIRSF PIRSF005859 1 146 9.7E-44 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 LT40_RS19995 d94dd3a838ad941165dc8fbfe50236b9 293 PANTHER PTHR10983 1 293 1.2E-124 T 23-04-2016 LT40_RS19995 d94dd3a838ad941165dc8fbfe50236b9 293 Gene3D G3DSA:3.40.1130.10 70 183 1.8E-7 T 23-04-2016 LT40_RS19995 d94dd3a838ad941165dc8fbfe50236b9 293 Pfam PF01553 Acyltransferase 72 212 1.2E-15 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LT40_RS19995 d94dd3a838ad941165dc8fbfe50236b9 293 SMART SM00563 85 227 2.8E-16 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LT40_RS19995 d94dd3a838ad941165dc8fbfe50236b9 293 SUPERFAMILY SSF69593 9 289 1.29E-37 T 23-04-2016 LT40_RS19995 d94dd3a838ad941165dc8fbfe50236b9 293 PANTHER PTHR10983:SF15 1 293 1.2E-124 T 23-04-2016 LT40_RS14025 dede1db63b44de719b4be883044ab261 243 Pfam PF00156 Phosphoribosyl transferase domain 148 238 2.5E-6 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LT40_RS14025 dede1db63b44de719b4be883044ab261 243 Gene3D G3DSA:3.40.50.2020 63 240 2.9E-28 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS14025 dede1db63b44de719b4be883044ab261 243 PANTHER PTHR11907 10 239 1.9E-51 T 23-04-2016 LT40_RS14025 dede1db63b44de719b4be883044ab261 243 PANTHER PTHR11907:SF9 10 239 1.9E-51 T 23-04-2016 LT40_RS14025 dede1db63b44de719b4be883044ab261 243 SUPERFAMILY SSF53271 61 238 1.19E-30 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS08040 6ea547ba3b792b691cbdefa6d7a3256a 122 SUPERFAMILY SSF46955 1 113 6.59E-31 T 23-04-2016 IPR009061 Putative DNA-binding domain LT40_RS08040 6ea547ba3b792b691cbdefa6d7a3256a 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 2.4E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS08040 6ea547ba3b792b691cbdefa6d7a3256a 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.4E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS08040 6ea547ba3b792b691cbdefa6d7a3256a 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.4E-12 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS08040 6ea547ba3b792b691cbdefa6d7a3256a 122 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS08040 6ea547ba3b792b691cbdefa6d7a3256a 122 PANTHER PTHR30204 1 110 7.2E-26 T 23-04-2016 LT40_RS08040 6ea547ba3b792b691cbdefa6d7a3256a 122 Gene3D G3DSA:1.10.1660.10 1 54 2.7E-24 T 23-04-2016 LT40_RS08040 6ea547ba3b792b691cbdefa6d7a3256a 122 Pfam PF13411 MerR HTH family regulatory protein 1 64 6.9E-18 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS08040 6ea547ba3b792b691cbdefa6d7a3256a 122 Gene3D G3DSA:1.10.1660.10 55 114 1.8E-12 T 23-04-2016 LT40_RS08040 6ea547ba3b792b691cbdefa6d7a3256a 122 SMART SM00422 1 69 1.1E-26 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS18585 e60c6257b194d95c97fe6b920b13013a 158 PANTHER PTHR21058 1 157 2.7E-75 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18585 e60c6257b194d95c97fe6b920b13013a 158 Gene3D G3DSA:3.40.50.960 5 156 3.7E-64 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18585 e60c6257b194d95c97fe6b920b13013a 158 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 16 151 7.7E-53 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18585 e60c6257b194d95c97fe6b920b13013a 158 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 152 3.7E-55 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18585 e60c6257b194d95c97fe6b920b13013a 158 SUPERFAMILY SSF52121 5 155 4.06E-61 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18585 e60c6257b194d95c97fe6b920b13013a 158 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 155 31.004 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS08925 fc5de8b10c39e51657acedfc31910634 264 SUPERFAMILY SSF56219 21 262 5.1E-46 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS08925 fc5de8b10c39e51657acedfc31910634 264 PANTHER PTHR15822:SF7 21 262 4.6E-84 T 23-04-2016 LT40_RS08925 fc5de8b10c39e51657acedfc31910634 264 PANTHER PTHR15822 21 262 4.6E-84 T 23-04-2016 LT40_RS08925 fc5de8b10c39e51657acedfc31910634 264 Gene3D G3DSA:3.60.10.10 14 262 7.9E-16 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS08925 fc5de8b10c39e51657acedfc31910634 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 26 255 1.0E-19 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS14095 d3910c5495f33a71ebddf7ccb8768bc3 295 PANTHER PTHR22911:SF41 1 294 1.9E-129 T 23-04-2016 LT40_RS14095 d3910c5495f33a71ebddf7ccb8768bc3 295 SUPERFAMILY SSF103481 46 145 1.16E-13 T 23-04-2016 LT40_RS14095 d3910c5495f33a71ebddf7ccb8768bc3 295 SUPERFAMILY SSF103481 191 284 2.75E-7 T 23-04-2016 LT40_RS14095 d3910c5495f33a71ebddf7ccb8768bc3 295 Pfam PF00892 EamA-like transporter family 8 141 1.9E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS14095 d3910c5495f33a71ebddf7ccb8768bc3 295 PANTHER PTHR22911 1 294 1.9E-129 T 23-04-2016 LT40_RS14095 d3910c5495f33a71ebddf7ccb8768bc3 295 TIGRFAM TIGR00688 rarD: protein RarD 8 259 3.3E-69 T 23-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 LT40_RS20415 39d7ffb1c94d2b2d856889805e350a64 569 PANTHER PTHR30255 1 569 1.8E-215 T 23-04-2016 LT40_RS20415 39d7ffb1c94d2b2d856889805e350a64 569 PANTHER PTHR30255:SF2 1 569 1.8E-215 T 23-04-2016 LT40_RS20415 39d7ffb1c94d2b2d856889805e350a64 569 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 565 2.4E-152 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 LT40_RS20415 39d7ffb1c94d2b2d856889805e350a64 569 Pfam PF01368 DHH family 69 197 1.1E-9 T 23-04-2016 IPR001667 DDH domain LT40_RS20415 39d7ffb1c94d2b2d856889805e350a64 569 SUPERFAMILY SSF64182 44 457 3.01E-118 T 23-04-2016 LT40_RS20415 39d7ffb1c94d2b2d856889805e350a64 569 Pfam PF02272 DHHA1 domain 374 442 2.9E-15 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 LT40_RS03765 f08224689ee095929760189186434713 297 Pfam PF02535 ZIP Zinc transporter 153 292 1.1E-16 T 23-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 LT40_RS03765 f08224689ee095929760189186434713 297 PANTHER PTHR11040 12 19 3.4E-63 T 23-04-2016 LT40_RS03765 f08224689ee095929760189186434713 297 PANTHER PTHR11040 37 296 3.4E-63 T 23-04-2016 LT40_RS03765 f08224689ee095929760189186434713 297 PANTHER PTHR11040:SF33 12 19 3.4E-63 T 23-04-2016 LT40_RS03765 f08224689ee095929760189186434713 297 PANTHER PTHR11040:SF33 37 296 3.4E-63 T 23-04-2016 LT40_RS15550 cbf21c5c14505e8749a429181612f18c 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 237 382 2.6E-26 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS15550 cbf21c5c14505e8749a429181612f18c 390 Gene3D G3DSA:1.20.140.10 224 386 5.7E-44 T 23-04-2016 LT40_RS15550 cbf21c5c14505e8749a429181612f18c 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 224 1.2E-20 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LT40_RS15550 cbf21c5c14505e8749a429181612f18c 390 PANTHER PTHR10909 2 389 2.2E-269 T 23-04-2016 LT40_RS15550 cbf21c5c14505e8749a429181612f18c 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 129 5.2E-34 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS15550 cbf21c5c14505e8749a429181612f18c 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 342 361 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 LT40_RS15550 cbf21c5c14505e8749a429181612f18c 390 SUPERFAMILY SSF56645 4 235 3.01E-77 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS15550 cbf21c5c14505e8749a429181612f18c 390 PANTHER PTHR10909:SF307 2 389 2.2E-269 T 23-04-2016 LT40_RS15550 cbf21c5c14505e8749a429181612f18c 390 SUPERFAMILY SSF47203 239 388 6.77E-42 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS15550 cbf21c5c14505e8749a429181612f18c 390 Gene3D G3DSA:1.10.540.10 2 131 3.8E-41 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS15550 cbf21c5c14505e8749a429181612f18c 390 Gene3D G3DSA:2.40.110.10 132 223 5.9E-32 T 23-04-2016 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 Pfam PF14559 Tetratricopeptide repeat 132 196 1.0E-10 T 23-04-2016 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 TIGRFAM TIGR01068 thioredoxin: thioredoxin 13 111 2.8E-30 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 SUPERFAMILY SSF48452 108 181 4.98E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 SUPERFAMILY SSF48452 216 243 4.98E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 Gene3D G3DSA:1.25.40.10 119 202 3.4E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 PANTHER PTHR10438:SF281 5 115 3.3E-37 T 23-04-2016 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 PANTHER PTHR10438:SF281 163 184 3.3E-37 T 23-04-2016 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 Pfam PF14561 Tetratricopeptide repeat 201 290 1.2E-24 T 23-04-2016 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 Pfam PF00085 Thioredoxin 10 110 2.4E-27 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 Gene3D G3DSA:1.25.40.10 205 290 2.4E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 ProSitePatterns PS00194 Thioredoxin family active site. 30 48 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 PRINTS PR00421 Thioredoxin family signature 29 37 1.6E-7 T 23-04-2016 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 PRINTS PR00421 Thioredoxin family signature 77 88 1.6E-7 T 23-04-2016 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 PRINTS PR00421 Thioredoxin family signature 37 46 1.6E-7 T 23-04-2016 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 SUPERFAMILY SSF52833 6 114 6.14E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS18555 6e3323d099d4921a261d11a645864315 290 Gene3D G3DSA:3.40.30.10 4 113 3.1E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS18555 6e3323d099d4921a261d11a645864315 290 PANTHER PTHR10438 5 115 3.3E-37 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LT40_RS18555 6e3323d099d4921a261d11a645864315 290 PANTHER PTHR10438 163 184 3.3E-37 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LT40_RS04865 4c0b72c8cd333d898d3a7b42d28bfa2b 340 Gene3D G3DSA:3.30.43.10 10 72 3.4E-21 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LT40_RS04865 4c0b72c8cd333d898d3a7b42d28bfa2b 340 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 11 336 1.6E-65 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04865 4c0b72c8cd333d898d3a7b42d28bfa2b 340 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 340 85.294 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04865 4c0b72c8cd333d898d3a7b42d28bfa2b 340 SUPERFAMILY SSF56176 10 197 2.38E-40 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS04865 4c0b72c8cd333d898d3a7b42d28bfa2b 340 Pfam PF01565 FAD binding domain 24 150 1.9E-23 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LT40_RS04865 4c0b72c8cd333d898d3a7b42d28bfa2b 340 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 217 339 5.0E-32 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04865 4c0b72c8cd333d898d3a7b42d28bfa2b 340 PANTHER PTHR21071:SF6 1 339 5.9E-149 T 23-04-2016 LT40_RS04865 4c0b72c8cd333d898d3a7b42d28bfa2b 340 Gene3D G3DSA:3.90.78.10 240 339 1.0E-38 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04865 4c0b72c8cd333d898d3a7b42d28bfa2b 340 Gene3D G3DSA:3.30.465.10 82 239 1.0E-50 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS04865 4c0b72c8cd333d898d3a7b42d28bfa2b 340 PANTHER PTHR21071 1 339 5.9E-149 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04865 4c0b72c8cd333d898d3a7b42d28bfa2b 340 SUPERFAMILY SSF56194 213 339 3.66E-45 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 211 595 1.4E-171 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 Gene3D G3DSA:1.10.645.10 212 579 8.1E-50 T 23-04-2016 IPR029014 NiFe hydrogenase-like LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 SUPERFAMILY SSF143243 19 225 2.88E-60 T 23-04-2016 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 20 181 25.458 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 PANTHER PTHR11993:SF28 143 590 4.5E-301 T 23-04-2016 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 325 595 9.1E-107 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 248 259 - T 23-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 11 595 70.81 T 23-04-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 207 595 42.154 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 SUPERFAMILY SSF56762 221 595 1.09E-123 T 23-04-2016 IPR029014 NiFe hydrogenase-like LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 PANTHER PTHR11993 143 590 4.5E-301 T 23-04-2016 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 45 174 2.9E-41 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 44 172 8.8E-41 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 LT40_RS11365 92472334b9f68760f9ccafa208b5e2c6 595 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 101 156 2.0E-25 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 LT40_RS12985 b4e3d3173f97f28c57b7d17d01a6d37d 557 PIRSF PIRSF003128 1 557 5.6E-163 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LT40_RS12985 b4e3d3173f97f28c57b7d17d01a6d37d 557 SUPERFAMILY SSF52540 1 217 1.24E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12985 b4e3d3173f97f28c57b7d17d01a6d37d 557 PANTHER PTHR11059 2 552 1.3E-171 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LT40_RS12985 b4e3d3173f97f28c57b7d17d01a6d37d 557 SUPERFAMILY SSF52540 2 50 8.05E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12985 b4e3d3173f97f28c57b7d17d01a6d37d 557 Gene3D G3DSA:3.40.50.300 423 502 1.7E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12985 b4e3d3173f97f28c57b7d17d01a6d37d 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 8 509 1.4E-14 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal LT40_RS12985 b4e3d3173f97f28c57b7d17d01a6d37d 557 SUPERFAMILY SSF52540 284 507 8.05E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12985 b4e3d3173f97f28c57b7d17d01a6d37d 557 Gene3D G3DSA:3.40.50.300 1 205 8.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12985 b4e3d3173f97f28c57b7d17d01a6d37d 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 8.3E-164 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LT40_RS18595 24f6607a42ee8fcaffb4e2a6a08b45c5 321 PIRSF PIRSF005303 1 317 2.5E-76 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 LT40_RS18595 24f6607a42ee8fcaffb4e2a6a08b45c5 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 137 1.0E-22 T 23-04-2016 IPR016188 PurM-like, N-terminal domain LT40_RS18595 24f6607a42ee8fcaffb4e2a6a08b45c5 321 Gene3D G3DSA:3.30.1330.10 1 140 7.5E-42 T 23-04-2016 IPR016188 PurM-like, N-terminal domain LT40_RS18595 24f6607a42ee8fcaffb4e2a6a08b45c5 321 SUPERFAMILY SSF56042 144 303 1.35E-33 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS18595 24f6607a42ee8fcaffb4e2a6a08b45c5 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 198 300 5.6E-8 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS18595 24f6607a42ee8fcaffb4e2a6a08b45c5 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 317 7.5E-91 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 LT40_RS18595 24f6607a42ee8fcaffb4e2a6a08b45c5 321 SUPERFAMILY SSF55326 1 137 2.09E-31 T 23-04-2016 LT40_RS18595 24f6607a42ee8fcaffb4e2a6a08b45c5 321 PANTHER PTHR30270:SF0 1 321 1.4E-108 T 23-04-2016 LT40_RS18595 24f6607a42ee8fcaffb4e2a6a08b45c5 321 PANTHER PTHR30270 1 321 1.4E-108 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 LT40_RS18595 24f6607a42ee8fcaffb4e2a6a08b45c5 321 Gene3D G3DSA:3.90.650.10 145 317 1.2E-43 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS18595 24f6607a42ee8fcaffb4e2a6a08b45c5 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 314 29.316 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 LT40_RS20515 f6b4420925fe1cd3a32817b14d456d50 270 Pfam PF14346 Domain of unknown function (DUF4398) 14 108 2.6E-9 T 23-04-2016 IPR025511 Domain of unknown function DUF4398 LT40_RS20515 f6b4420925fe1cd3a32817b14d456d50 270 Gene3D G3DSA:3.30.1330.60 143 256 1.5E-37 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS20515 f6b4420925fe1cd3a32817b14d456d50 270 ProSitePatterns PS01068 OmpA-like domain. 188 232 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 LT40_RS20515 f6b4420925fe1cd3a32817b14d456d50 270 Pfam PF00691 OmpA family 155 250 4.6E-22 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS20515 f6b4420925fe1cd3a32817b14d456d50 270 PANTHER PTHR30128 126 256 1.1E-42 T 23-04-2016 LT40_RS20515 f6b4420925fe1cd3a32817b14d456d50 270 PRINTS PR01021 OMPA domain signature 201 217 3.8E-11 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS20515 f6b4420925fe1cd3a32817b14d456d50 270 PRINTS PR01021 OMPA domain signature 156 178 3.8E-11 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS20515 f6b4420925fe1cd3a32817b14d456d50 270 PRINTS PR01021 OMPA domain signature 186 201 3.8E-11 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS20515 f6b4420925fe1cd3a32817b14d456d50 270 SUPERFAMILY SSF103088 136 256 1.44E-35 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS03605 3d122599b1072f72aa20886c1d38902b 303 PANTHER PTHR30465 11 301 4.5E-127 T 23-04-2016 LT40_RS03605 3d122599b1072f72aa20886c1d38902b 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 300 3.5E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03605 3d122599b1072f72aa20886c1d38902b 303 SUPERFAMILY SSF161098 94 281 6.8E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03605 3d122599b1072f72aa20886c1d38902b 303 PANTHER PTHR30465:SF10 11 301 4.5E-127 T 23-04-2016 LT40_RS03605 3d122599b1072f72aa20886c1d38902b 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 70 6.3E-15 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LT40_RS03605 3d122599b1072f72aa20886c1d38902b 303 Gene3D G3DSA:1.10.3720.10 93 297 4.7E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 PANTHER PTHR23115:SF151 1 396 2.9E-254 T 23-04-2016 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 PANTHER PTHR23115 1 396 2.9E-254 T 23-04-2016 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 58.407 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.6E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.6E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.6E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.6E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 SUPERFAMILY SSF50465 301 396 8.35E-36 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 147 2.8E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 Pfam PF03143 Elongation factor Tu C-terminal domain 301 395 6.3E-34 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 Gene3D G3DSA:2.40.30.10 215 301 1.6E-34 T 23-04-2016 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 SUPERFAMILY SSF52540 11 222 2.05E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 397 1.2E-218 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 SUPERFAMILY SSF50447 209 304 1.47E-28 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 Pfam PF00009 Elongation factor Tu GTP binding domain 11 204 2.1E-55 T 23-04-2016 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 Gene3D G3DSA:3.40.50.300 4 214 2.8E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 Pfam PF03144 Elongation factor Tu domain 2 228 296 1.2E-15 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 Gene3D G3DSA:2.40.30.10 303 396 3.8E-47 T 23-04-2016 LT40_RS18345 b22cead6a170ba72fc4f01f73567885b 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site LT40_RS10405 dc5688ab0f0e95faf6bc9457276689a2 256 Pfam PF00005 ABC transporter 31 179 5.0E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS10405 dc5688ab0f0e95faf6bc9457276689a2 256 SUPERFAMILY SSF52540 17 249 4.11E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10405 dc5688ab0f0e95faf6bc9457276689a2 256 Gene3D G3DSA:3.40.50.300 16 251 5.0E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10405 dc5688ab0f0e95faf6bc9457276689a2 256 PANTHER PTHR24220:SF474 17 256 2.7E-154 T 23-04-2016 LT40_RS10405 dc5688ab0f0e95faf6bc9457276689a2 256 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS10405 dc5688ab0f0e95faf6bc9457276689a2 256 PIRSF PIRSF039085 12 255 2.5E-106 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS10405 dc5688ab0f0e95faf6bc9457276689a2 256 PANTHER PTHR24220 17 256 2.7E-154 T 23-04-2016 LT40_RS10405 dc5688ab0f0e95faf6bc9457276689a2 256 SMART SM00382 40 227 4.9E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS05805 a6d7f2e2a90f6da756908e9f82d20b3a 209 SUPERFAMILY SSF55821 2 203 1.34E-63 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LT40_RS05805 a6d7f2e2a90f6da756908e9f82d20b3a 209 PANTHER PTHR17490:SF7 2 208 6.7E-90 T 23-04-2016 LT40_RS05805 a6d7f2e2a90f6da756908e9f82d20b3a 209 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.9E-63 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 LT40_RS05805 a6d7f2e2a90f6da756908e9f82d20b3a 209 Pfam PF01300 Telomere recombination 22 198 2.2E-44 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 LT40_RS05805 a6d7f2e2a90f6da756908e9f82d20b3a 209 PANTHER PTHR17490 2 208 6.7E-90 T 23-04-2016 LT40_RS05805 a6d7f2e2a90f6da756908e9f82d20b3a 209 Gene3D G3DSA:3.90.870.10 3 202 2.8E-62 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 Pfam PF00691 OmpA family 141 235 1.7E-23 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 Gene3D G3DSA:3.30.1330.60 129 241 3.3E-39 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 ProSitePatterns PS01068 OmpA-like domain. 173 217 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 PRINTS PR01021 OMPA domain signature 186 202 2.1E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 PRINTS PR01021 OMPA domain signature 141 163 2.1E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 PRINTS PR01021 OMPA domain signature 171 186 2.1E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 SUPERFAMILY SSF103088 112 240 4.32E-36 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 224 243 8.1E-7 T 23-04-2016 LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 186 203 8.1E-7 T 23-04-2016 LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 204 223 8.1E-7 T 23-04-2016 LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 PANTHER PTHR30128 122 241 6.9E-43 T 23-04-2016 LT40_RS00805 06179e8f21b3fef6d4652941b1990453 243 SUPERFAMILY SSF103647 78 113 6.54E-7 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 PANTHER PTHR30537:SF22 3 308 5.3E-115 T 23-04-2016 LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 Gene3D G3DSA:3.40.190.10 99 175 1.0E-12 T 23-04-2016 LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.8E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.8E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.8E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 Pfam PF03466 LysR substrate binding domain 98 291 1.3E-15 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 Gene3D G3DSA:3.40.190.10 176 255 2.0E-7 T 23-04-2016 LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 Gene3D G3DSA:1.10.10.10 14 93 1.8E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 69 1.8E-22 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 SUPERFAMILY SSF53850 99 294 1.68E-20 T 23-04-2016 LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 SUPERFAMILY SSF46785 10 118 9.87E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15220 ecbae2dd989b469008e62c253fe38020 315 PANTHER PTHR30537 3 308 5.3E-115 T 23-04-2016 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 SUPERFAMILY SSF50447 271 411 3.76E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 Gene3D G3DSA:3.30.70.870 413 487 1.0E-39 T 23-04-2016 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 Gene3D G3DSA:3.30.230.10 491 610 9.4E-46 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 SMART SM00889 487 606 3.0E-67 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 Pfam PF03144 Elongation factor Tu domain 2 331 398 5.9E-17 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 Gene3D G3DSA:3.40.50.300 5 293 5.6E-98 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 SUPERFAMILY SSF52540 6 287 2.25E-101 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 PANTHER PTHR23115 3 184 0.0 T 23-04-2016 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 PANTHER PTHR23115 310 699 0.0 T 23-04-2016 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 PANTHER PTHR23115 261 289 0.0 T 23-04-2016 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 PANTHER PTHR23115:SF66 3 184 0.0 T 23-04-2016 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 PANTHER PTHR23115:SF66 310 699 0.0 T 23-04-2016 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 PANTHER PTHR23115:SF66 261 289 0.0 T 23-04-2016 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 287 5.2E-63 T 23-04-2016 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 Gene3D G3DSA:3.30.70.240 611 698 2.5E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 Gene3D G3DSA:2.40.30.10 312 412 1.9E-37 T 23-04-2016 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 SUPERFAMILY SSF54980 611 697 4.17E-29 T 23-04-2016 IPR009022 Elongation factor G, III-V domain LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 7.7E-33 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 Pfam PF14492 Elongation Factor G, domain II 411 485 4.1E-35 T 23-04-2016 IPR009022 Elongation factor G, III-V domain LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 Pfam PF03764 Elongation factor G, domain IV 486 604 1.0E-42 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 SUPERFAMILY SSF54980 411 488 1.51E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 108.036 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 SUPERFAMILY SSF54211 486 605 6.57E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 Pfam PF00679 Elongation factor G C-terminus 609 693 9.4E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.1E-17 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.1E-17 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.1E-17 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.1E-17 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.1E-17 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 699 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 LT40_RS18340 751ad4a0ee940c91951785771e5bbac6 700 SMART SM00838 608 695 3.0E-55 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 Gene3D G3DSA:3.30.70.120 1 112 7.4E-50 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.6E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 PRINTS PR00340 P-II protein signature 2 17 2.0E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 PRINTS PR00340 P-II protein signature 52 75 2.0E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 PRINTS PR00340 P-II protein signature 83 103 2.0E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 PRINTS PR00340 P-II protein signature 23 41 2.0E-43 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 23-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 SUPERFAMILY SSF54913 1 112 4.45E-45 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 PANTHER PTHR30115 1 112 4.2E-78 T 23-04-2016 LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 PANTHER PTHR30115:SF12 1 112 4.2E-78 T 23-04-2016 LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 PIRSF PIRSF039144 1 112 1.3E-54 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LT40_RS16690 54ba59de1f5bae1d7acfd49f60afacaa 112 SMART SM00938 4 105 4.1E-65 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 LT40_RS18665 65b7db69e5a77f2f0583cbb0832c6d5b 439 Gene3D G3DSA:1.10.1040.10 350 397 8.1E-4 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS18665 65b7db69e5a77f2f0583cbb0832c6d5b 439 Gene3D G3DSA:1.10.1040.10 167 292 2.7E-23 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS18665 65b7db69e5a77f2f0583cbb0832c6d5b 439 SUPERFAMILY SSF48179 166 290 1.13E-22 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS18665 65b7db69e5a77f2f0583cbb0832c6d5b 439 Gene3D G3DSA:3.40.50.720 2 164 7.0E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18665 65b7db69e5a77f2f0583cbb0832c6d5b 439 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 164 5.6E-30 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LT40_RS18665 65b7db69e5a77f2f0583cbb0832c6d5b 439 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 286 1.2E-19 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 LT40_RS18665 65b7db69e5a77f2f0583cbb0832c6d5b 439 PANTHER PTHR22981 5 270 1.4E-55 T 23-04-2016 LT40_RS18665 65b7db69e5a77f2f0583cbb0832c6d5b 439 SUPERFAMILY SSF51735 4 164 2.21E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12340 5aace23583252e12a86b141b25f64eea 560 PANTHER PTHR30462 24 511 9.7E-86 T 23-04-2016 LT40_RS12340 5aace23583252e12a86b141b25f64eea 560 PANTHER PTHR30462:SF2 24 511 9.7E-86 T 23-04-2016 LT40_RS12340 5aace23583252e12a86b141b25f64eea 560 Pfam PF02470 MlaD protein 294 402 3.4E-15 T 23-04-2016 IPR003399 Mce/MlaD LT40_RS12340 5aace23583252e12a86b141b25f64eea 560 Pfam PF02470 MlaD protein 166 226 1.8E-8 T 23-04-2016 IPR003399 Mce/MlaD LT40_RS12340 5aace23583252e12a86b141b25f64eea 560 Pfam PF02470 MlaD protein 52 116 1.3E-9 T 23-04-2016 IPR003399 Mce/MlaD LT40_RS09375 652dabaf6a9c52f44b373eb7b1fa2e25 280 Pfam PF00483 Nucleotidyl transferase 9 267 1.1E-29 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LT40_RS09375 652dabaf6a9c52f44b373eb7b1fa2e25 280 Gene3D G3DSA:3.90.550.10 2 267 1.1E-63 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09375 652dabaf6a9c52f44b373eb7b1fa2e25 280 SUPERFAMILY SSF53448 2 270 4.51E-60 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09375 652dabaf6a9c52f44b373eb7b1fa2e25 280 PANTHER PTHR22572 4 277 4.2E-97 T 23-04-2016 LT40_RS09375 652dabaf6a9c52f44b373eb7b1fa2e25 280 PANTHER PTHR22572:SF14 4 277 4.2E-97 T 23-04-2016 LT40_RS09375 652dabaf6a9c52f44b373eb7b1fa2e25 280 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 264 4.5E-120 T 23-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 LT40_RS12225 c46be1600310e225814f4ed7847b10bd 214 Gene3D G3DSA:3.40.50.2300 2 120 1.3E-35 T 23-04-2016 LT40_RS12225 c46be1600310e225814f4ed7847b10bd 214 Pfam PF00072 Response regulator receiver domain 4 116 7.0E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS12225 c46be1600310e225814f4ed7847b10bd 214 SUPERFAMILY SSF46894 133 211 4.08E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS12225 c46be1600310e225814f4ed7847b10bd 214 PANTHER PTHR26402:SF506 2 213 2.5E-94 T 23-04-2016 LT40_RS12225 c46be1600310e225814f4ed7847b10bd 214 SMART SM00421 147 204 3.9E-16 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS12225 c46be1600310e225814f4ed7847b10bd 214 SMART SM00448 2 115 1.2E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS12225 c46be1600310e225814f4ed7847b10bd 214 Gene3D G3DSA:1.10.10.10 121 211 3.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12225 c46be1600310e225814f4ed7847b10bd 214 PANTHER PTHR26402 2 213 2.5E-94 T 23-04-2016 LT40_RS12225 c46be1600310e225814f4ed7847b10bd 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS12225 c46be1600310e225814f4ed7847b10bd 214 SUPERFAMILY SSF52172 2 132 1.71E-34 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS12225 c46be1600310e225814f4ed7847b10bd 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 3.3E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 SUPERFAMILY SSF81653 237 335 1.05E-26 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 SUPERFAMILY SSF81665 336 431 3.79E-12 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 SUPERFAMILY SSF81665 685 708 3.79E-12 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 SUPERFAMILY SSF81665 182 239 3.79E-12 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 Pfam PF00702 haloacid dehalogenase-like hydrolase 434 650 5.1E-45 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 168 745 7.4E-190 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 Pfam PF00403 Heavy-metal-associated domain 12 69 1.6E-16 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 Pfam PF00122 E1-E2 ATPase 207 428 7.3E-66 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PRINTS PR00943 Copper-transporting ATPase signature 670 684 3.2E-11 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PRINTS PR00943 Copper-transporting ATPase signature 205 224 3.2E-11 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PRINTS PR00943 Copper-transporting ATPase signature 358 372 3.2E-11 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PRINTS PR00943 Copper-transporting ATPase signature 225 243 3.2E-11 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PRINTS PR00943 Copper-transporting ATPase signature 153 172 3.2E-11 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PRINTS PR00943 Copper-transporting ATPase signature 22 36 3.2E-11 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 Gene3D G3DSA:3.40.1110.10 452 563 1.2E-26 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PANTHER PTHR24093 8 736 7.5E-249 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 ProSitePatterns PS01047 Heavy-metal-associated domain. 12 41 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 SUPERFAMILY SSF55008 8 74 5.24E-20 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 150 746 1.1E-180 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 Gene3D G3DSA:3.30.70.100 8 74 3.4E-25 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 207 716 6.3E-89 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 Gene3D G3DSA:3.40.50.1000 408 451 4.4E-59 T 23-04-2016 IPR023214 HAD-like domain LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 Gene3D G3DSA:3.40.50.1000 564 704 4.4E-59 T 23-04-2016 IPR023214 HAD-like domain LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 437 451 4.2E-27 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 285 299 4.2E-27 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 583 593 4.2E-27 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 636 655 4.2E-27 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 659 671 4.2E-27 T 23-04-2016 LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 439 445 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 SUPERFAMILY SSF56784 435 455 5.17E-63 T 23-04-2016 IPR023214 HAD-like domain LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 SUPERFAMILY SSF56784 494 743 5.17E-63 T 23-04-2016 IPR023214 HAD-like domain LT40_RS09730 c439401ca95d31e2115b13f331d2aa50 755 Gene3D G3DSA:2.70.150.10 190 336 3.2E-30 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LT40_RS04025 146828a637ec7263eaac3bbeca3dbc89 582 SUPERFAMILY SSF56519 52 219 2.49E-44 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LT40_RS04025 146828a637ec7263eaac3bbeca3dbc89 582 Gene3D G3DSA:3.40.710.10 227 551 6.1E-89 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS04025 146828a637ec7263eaac3bbeca3dbc89 582 PANTHER PTHR30627 1 568 4.5E-213 T 23-04-2016 LT40_RS04025 146828a637ec7263eaac3bbeca3dbc89 582 Gene3D G3DSA:3.90.1310.10 127 226 9.7E-28 T 23-04-2016 LT40_RS04025 146828a637ec7263eaac3bbeca3dbc89 582 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 205 5.3E-18 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LT40_RS04025 146828a637ec7263eaac3bbeca3dbc89 582 Pfam PF00905 Penicillin binding protein transpeptidase domain 245 545 5.5E-81 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LT40_RS04025 146828a637ec7263eaac3bbeca3dbc89 582 PANTHER PTHR30627:SF1 1 568 4.5E-213 T 23-04-2016 LT40_RS04025 146828a637ec7263eaac3bbeca3dbc89 582 SUPERFAMILY SSF56601 171 569 2.9E-92 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS09280 bb09256f0e02ae54c41179844dc7800f 436 Gene3D G3DSA:1.20.1250.20 18 201 5.0E-51 T 23-04-2016 LT40_RS09280 bb09256f0e02ae54c41179844dc7800f 436 SUPERFAMILY SSF103473 10 430 8.89E-79 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS09280 bb09256f0e02ae54c41179844dc7800f 436 PIRSF PIRSF002808 2 435 6.9E-36 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LT40_RS09280 bb09256f0e02ae54c41179844dc7800f 436 PANTHER PTHR11662 14 436 4.0E-142 T 23-04-2016 LT40_RS09280 bb09256f0e02ae54c41179844dc7800f 436 Pfam PF07690 Major Facilitator Superfamily 26 394 9.5E-57 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS09280 bb09256f0e02ae54c41179844dc7800f 436 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 28 428 1.6E-127 T 23-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 LT40_RS09280 bb09256f0e02ae54c41179844dc7800f 436 PANTHER PTHR11662:SF18 14 436 4.0E-142 T 23-04-2016 LT40_RS09280 bb09256f0e02ae54c41179844dc7800f 436 Gene3D G3DSA:1.20.1250.20 241 429 2.1E-21 T 23-04-2016 LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 SUPERFAMILY SSF53623 100 303 4.19E-52 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 SUPERFAMILY SSF51984 11 95 6.67E-15 T 23-04-2016 LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 Pfam PF08245 Mur ligase middle domain 114 285 3.9E-25 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 12 445 1.5E-120 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 Gene3D G3DSA:3.40.1190.10 98 305 8.7E-63 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 PANTHER PTHR23135:SF2 1 447 5.0E-157 T 23-04-2016 LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 Gene3D G3DSA:3.40.50.720 11 95 3.4E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 382 1.0E-5 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 PANTHER PTHR23135 1 447 5.0E-157 T 23-04-2016 LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 SUPERFAMILY SSF53244 305 447 1.12E-44 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 Gene3D G3DSA:3.90.190.20 307 444 1.1E-45 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS04045 5f81829094cffc4bfe7550afac15d9ad 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 447 33.941 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS16290 1dece459817658f4c9fdc1a3baed5543 148 Gene3D G3DSA:3.40.630.30 1 145 9.8E-33 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS16290 1dece459817658f4c9fdc1a3baed5543 148 PANTHER PTHR10545 1 145 1.7E-58 T 23-04-2016 LT40_RS16290 1dece459817658f4c9fdc1a3baed5543 148 SUPERFAMILY SSF55729 4 134 3.38E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS16290 1dece459817658f4c9fdc1a3baed5543 148 PANTHER PTHR10545:SF39 1 145 1.7E-58 T 23-04-2016 IPR032962 Acetyltransferase HPA2/HPA3 GO:0016746 LT40_RS16290 1dece459817658f4c9fdc1a3baed5543 148 Pfam PF00583 Acetyltransferase (GNAT) family 56 135 4.0E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS10525 a6a92f764875a2b81e61645a1cf901d8 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 310 2.6E-12 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LT40_RS10525 a6a92f764875a2b81e61645a1cf901d8 366 PANTHER PTHR30386:SF7 31 363 2.1E-73 T 23-04-2016 LT40_RS10525 a6a92f764875a2b81e61645a1cf901d8 366 PANTHER PTHR30386 31 363 2.1E-73 T 23-04-2016 LT40_RS10525 a6a92f764875a2b81e61645a1cf901d8 366 Gene3D G3DSA:2.40.50.100 70 101 8.6E-16 T 23-04-2016 LT40_RS10525 a6a92f764875a2b81e61645a1cf901d8 366 Gene3D G3DSA:2.40.50.100 232 265 8.6E-16 T 23-04-2016 LT40_RS10525 a6a92f764875a2b81e61645a1cf901d8 366 SUPERFAMILY SSF111369 189 327 1.31E-11 T 23-04-2016 LT40_RS10525 a6a92f764875a2b81e61645a1cf901d8 366 SUPERFAMILY SSF111369 139 198 1.1E-6 T 23-04-2016 LT40_RS10525 a6a92f764875a2b81e61645a1cf901d8 366 SUPERFAMILY SSF111369 69 126 1.96E-9 T 23-04-2016 LT40_RS16975 f4678132e9e08ee3181744ad0cf49ed2 278 Gene3D G3DSA:3.40.50.300 6 218 6.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16975 f4678132e9e08ee3181744ad0cf49ed2 278 PANTHER PTHR24220:SF564 5 208 2.0E-111 T 23-04-2016 LT40_RS16975 f4678132e9e08ee3181744ad0cf49ed2 278 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS16975 f4678132e9e08ee3181744ad0cf49ed2 278 SUPERFAMILY SSF52540 6 212 8.92E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16975 f4678132e9e08ee3181744ad0cf49ed2 278 SMART SM00382 30 211 3.9E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS16975 f4678132e9e08ee3181744ad0cf49ed2 278 PANTHER PTHR24220 5 208 2.0E-111 T 23-04-2016 LT40_RS16975 f4678132e9e08ee3181744ad0cf49ed2 278 Pfam PF00005 ABC transporter 21 160 1.5E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS20640 4422f3af5fdefe9afc65d0b082e9821d 260 Gene3D G3DSA:3.60.20.10 1 252 1.1E-67 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS20640 4422f3af5fdefe9afc65d0b082e9821d 260 PANTHER PTHR11907 1 258 5.2E-115 T 23-04-2016 LT40_RS20640 4422f3af5fdefe9afc65d0b082e9821d 260 PANTHER PTHR11907:SF10 1 258 5.2E-115 T 23-04-2016 LT40_RS20640 4422f3af5fdefe9afc65d0b082e9821d 260 SUPERFAMILY SSF56235 2 251 1.25E-52 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS20640 4422f3af5fdefe9afc65d0b082e9821d 260 Pfam PF13230 Glutamine amidotransferases class-II 1 255 3.1E-109 T 23-04-2016 IPR026869 Putative glutamine amidotransferase type 2 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 SUPERFAMILY SSF56024 553 734 8.97E-71 T 23-04-2016 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 Pfam PF13090 Polyphosphate kinase C-terminal domain 383 729 4.8E-149 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 Hamap MF_00347 Polyphosphate kinase [ppk]. 55 734 34.026 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 PIRSF PIRSF015589 33 737 1.4E-286 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 Gene3D G3DSA:3.30.870.10 553 734 2.4E-74 T 23-04-2016 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 Gene3D G3DSA:3.30.870.10 368 552 1.1E-70 T 23-04-2016 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 SUPERFAMILY SSF56024 368 549 1.26E-53 T 23-04-2016 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 58 731 5.6E-284 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 SUPERFAMILY SSF143724 161 366 1.22E-62 T 23-04-2016 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 Pfam PF13089 Polyphosphate kinase N-terminal domain 58 163 1.3E-34 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 Pfam PF02503 Polyphosphate kinase middle domain 174 374 5.5E-64 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 PANTHER PTHR30218 21 741 0.0 T 23-04-2016 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 PANTHER PTHR30218:SF0 21 741 0.0 T 23-04-2016 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 Gene3D G3DSA:3.30.1840.10 161 353 2.5E-69 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 LT40_RS16835 2042b9bfeb4abd398ca6c969bacb08e2 741 SUPERFAMILY SSF140356 55 159 4.84E-37 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 LT40_RS14045 f9736ab40218a603df9886d5ff4a9495 271 PANTHER PTHR10108 19 192 2.3E-44 T 23-04-2016 LT40_RS14045 f9736ab40218a603df9886d5ff4a9495 271 SUPERFAMILY SSF53335 16 265 1.18E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14045 f9736ab40218a603df9886d5ff4a9495 271 Pfam PF08241 Methyltransferase domain 54 147 4.7E-19 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LT40_RS14045 f9736ab40218a603df9886d5ff4a9495 271 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 10 264 31.03 T 23-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 LT40_RS14045 f9736ab40218a603df9886d5ff4a9495 271 PANTHER PTHR10108:SF855 19 192 2.3E-44 T 23-04-2016 LT40_RS14045 f9736ab40218a603df9886d5ff4a9495 271 Gene3D G3DSA:3.40.50.150 15 199 1.0E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14045 f9736ab40218a603df9886d5ff4a9495 271 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 18 264 7.7E-73 T 23-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 LT40_RS04085 fc9f13a956047819ea9465f432a85cf9 303 Gene3D G3DSA:3.30.1700.10 128 282 1.6E-57 T 23-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 LT40_RS04085 fc9f13a956047819ea9465f432a85cf9 303 PANTHER PTHR33694 1 302 1.7E-129 T 23-04-2016 LT40_RS04085 fc9f13a956047819ea9465f432a85cf9 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 1.3E-115 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 LT40_RS04085 fc9f13a956047819ea9465f432a85cf9 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 2.1E-106 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 LT40_RS04085 fc9f13a956047819ea9465f432a85cf9 303 Gene3D G3DSA:3.30.230.20 3 125 7.0E-47 T 23-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 LT40_RS04085 fc9f13a956047819ea9465f432a85cf9 303 SUPERFAMILY SSF54211 3 125 3.03E-43 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS04085 fc9f13a956047819ea9465f432a85cf9 303 SUPERFAMILY SSF54211 134 277 2.43E-50 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS04085 fc9f13a956047819ea9465f432a85cf9 303 PANTHER PTHR33694:SF1 1 302 1.7E-129 T 23-04-2016 LT40_RS04085 fc9f13a956047819ea9465f432a85cf9 303 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 48.493 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 PANTHER PTHR24567:SF28 12 239 5.1E-95 T 23-04-2016 LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 SMART SM00419 182 230 3.3E-14 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 SUPERFAMILY SSF46785 161 239 8.95E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 SMART SM00100 25 146 1.4E-19 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 SUPERFAMILY SSF51206 18 157 2.75E-31 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 188 204 1.2E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 204 219 1.2E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 PANTHER PTHR24567 12 239 5.1E-95 T 23-04-2016 LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 ProSitePatterns PS00042 Crp-type HTH domain signature. 190 213 - T 23-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 Gene3D G3DSA:1.10.10.10 165 239 1.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 Gene3D G3DSA:2.60.120.10 14 164 4.0E-32 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 Pfam PF13545 Crp-like helix-turn-helix domain 163 236 3.3E-17 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LT40_RS02690 a22546915bec43b4b80b9dd3799b9e43 244 Pfam PF00027 Cyclic nucleotide-binding domain 45 127 5.4E-17 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain LT40_RS03480 dd43f36a92c90a431aba68306a36fbc6 259 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 1.1E-5 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS03480 dd43f36a92c90a431aba68306a36fbc6 259 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 0.0011 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS03480 dd43f36a92c90a431aba68306a36fbc6 259 Gene3D G3DSA:2.160.10.10 59 180 1.2E-35 T 23-04-2016 LT40_RS03480 dd43f36a92c90a431aba68306a36fbc6 259 Gene3D G3DSA:1.10.3130.10 1 58 8.5E-28 T 23-04-2016 LT40_RS03480 dd43f36a92c90a431aba68306a36fbc6 259 SUPERFAMILY SSF51161 2 168 3.74E-55 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS03480 dd43f36a92c90a431aba68306a36fbc6 259 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 2.6E-78 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 LT40_RS03480 dd43f36a92c90a431aba68306a36fbc6 259 PANTHER PTHR23416:SF55 1 238 7.1E-105 T 23-04-2016 LT40_RS03480 dd43f36a92c90a431aba68306a36fbc6 259 PANTHER PTHR23416 1 238 7.1E-105 T 23-04-2016 LT40_RS09835 87f3a184a95963d23d2f48da28223ca9 176 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 8 167 6.8E-55 T 23-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 LT40_RS09835 87f3a184a95963d23d2f48da28223ca9 176 PANTHER PTHR11603 1 167 7.2E-70 T 23-04-2016 LT40_RS09835 87f3a184a95963d23d2f48da28223ca9 176 SUPERFAMILY SSF52540 8 170 9.78E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09835 87f3a184a95963d23d2f48da28223ca9 176 Pfam PF01202 Shikimate kinase 14 123 4.5E-7 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS09835 87f3a184a95963d23d2f48da28223ca9 176 Gene3D G3DSA:3.40.50.300 6 167 6.8E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12695 fe3eb1529a86946258f31cb90888a5ac 118 PIRSF PIRSF006113 1 118 1.4E-49 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein LT40_RS12695 fe3eb1529a86946258f31cb90888a5ac 118 PANTHER PTHR12589 1 115 2.1E-49 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein LT40_RS12695 fe3eb1529a86946258f31cb90888a5ac 118 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 2 94 2.4E-33 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein LT40_RS12695 fe3eb1529a86946258f31cb90888a5ac 118 Gene3D G3DSA:3.30.479.10 1 116 1.6E-41 T 23-04-2016 LT40_RS12695 fe3eb1529a86946258f31cb90888a5ac 118 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 2 116 9.9E-37 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein LT40_RS12695 fe3eb1529a86946258f31cb90888a5ac 118 SUPERFAMILY SSF55620 2 116 1.45E-41 T 23-04-2016 LT40_RS11755 76b0d85c784c1ed0be0c8af91ccbce18 350 SUPERFAMILY SSF55486 7 331 9.89E-61 T 23-04-2016 LT40_RS11755 76b0d85c784c1ed0be0c8af91ccbce18 350 PANTHER PTHR34217:SF1 2 349 6.7E-102 T 23-04-2016 LT40_RS11755 76b0d85c784c1ed0be0c8af91ccbce18 350 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 15 348 1.9E-54 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LT40_RS11755 76b0d85c784c1ed0be0c8af91ccbce18 350 PANTHER PTHR34217 2 349 6.7E-102 T 23-04-2016 LT40_RS11755 76b0d85c784c1ed0be0c8af91ccbce18 350 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 86 102 1.9E-35 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LT40_RS11755 76b0d85c784c1ed0be0c8af91ccbce18 350 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 148 164 1.9E-35 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LT40_RS11755 76b0d85c784c1ed0be0c8af91ccbce18 350 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 9 29 1.9E-35 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LT40_RS11755 76b0d85c784c1ed0be0c8af91ccbce18 350 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 186 205 1.9E-35 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LT40_RS11755 76b0d85c784c1ed0be0c8af91ccbce18 350 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 256 277 1.9E-35 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LT40_RS11755 76b0d85c784c1ed0be0c8af91ccbce18 350 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 301 319 1.9E-35 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LT40_RS11755 76b0d85c784c1ed0be0c8af91ccbce18 350 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 121 140 1.9E-35 T 23-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 LT40_RS02755 1e90df0dd1ce89d420ab650bc6b15ccb 96 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 14 91 2.6E-23 T 23-04-2016 IPR011846 Cyd operon protein YbgE LT40_RS08285 3abc646f5957e5d4e805262ed62a11a9 314 Gene3D G3DSA:1.10.3470.10 6 312 1.2E-68 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS08285 3abc646f5957e5d4e805262ed62a11a9 314 Pfam PF01032 FecCD transport family 12 311 1.0E-65 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LT40_RS08285 3abc646f5957e5d4e805262ed62a11a9 314 PANTHER PTHR30472 12 314 1.4E-125 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LT40_RS08285 3abc646f5957e5d4e805262ed62a11a9 314 PANTHER PTHR30472:SF27 12 314 1.4E-125 T 23-04-2016 LT40_RS08285 3abc646f5957e5d4e805262ed62a11a9 314 SUPERFAMILY SSF81345 5 311 3.79E-64 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS05160 a8bd4c4b58834eafc8df8711e6139377 815 Gene3D G3DSA:1.10.540.10 99 236 4.3E-30 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS05160 a8bd4c4b58834eafc8df8711e6139377 815 Gene3D G3DSA:2.40.110.10 240 352 2.4E-16 T 23-04-2016 LT40_RS05160 a8bd4c4b58834eafc8df8711e6139377 815 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 240 337 2.2E-8 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LT40_RS05160 a8bd4c4b58834eafc8df8711e6139377 815 Pfam PF09317 Domain of unknown function (DUF1974) 517 802 1.0E-103 T 23-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 LT40_RS05160 a8bd4c4b58834eafc8df8711e6139377 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 363 508 9.2E-15 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS05160 a8bd4c4b58834eafc8df8711e6139377 815 Gene3D G3DSA:1.20.140.10 353 509 1.5E-28 T 23-04-2016 LT40_RS05160 a8bd4c4b58834eafc8df8711e6139377 815 SUPERFAMILY SSF47203 363 513 2.74E-28 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS05160 a8bd4c4b58834eafc8df8711e6139377 815 PANTHER PTHR10909 53 536 2.2E-237 T 23-04-2016 LT40_RS05160 a8bd4c4b58834eafc8df8711e6139377 815 SUPERFAMILY SSF56645 123 358 7.33E-45 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS05160 a8bd4c4b58834eafc8df8711e6139377 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 143 236 1.8E-17 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS05160 a8bd4c4b58834eafc8df8711e6139377 815 PANTHER PTHR10909:SF283 53 536 2.2E-237 T 23-04-2016 LT40_RS19430 4ecd3cef689f3f907958eca36d07c906 153 PANTHER PTHR37952:SF2 6 150 5.4E-76 T 23-04-2016 LT40_RS19430 4ecd3cef689f3f907958eca36d07c906 153 Pfam PF05981 CreA protein 23 150 1.1E-57 T 23-04-2016 IPR010292 Uncharacterised protein family CreA LT40_RS19430 4ecd3cef689f3f907958eca36d07c906 153 PANTHER PTHR37952 6 150 5.4E-76 T 23-04-2016 LT40_RS19430 4ecd3cef689f3f907958eca36d07c906 153 PIRSF PIRSF003174 1 153 1.1E-68 T 23-04-2016 IPR010292 Uncharacterised protein family CreA LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 Gene3D G3DSA:3.40.50.2300 37 142 1.2E-7 T 23-04-2016 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 PANTHER PTHR11751 148 493 4.9E-129 T 23-04-2016 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 PANTHER PTHR11751 534 542 4.9E-129 T 23-04-2016 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 PANTHER PTHR11751 559 682 4.9E-129 T 23-04-2016 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 390 404 - T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 Gene3D G3DSA:3.90.100.10 639 751 6.8E-30 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 27 141 3.4E-23 T 23-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 SUPERFAMILY SSF55904 617 751 6.15E-34 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 PIRSF PIRSF009393 10 757 4.9E-256 T 23-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 147 597 2.8E-156 T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 PANTHER PTHR11751:SF406 148 493 4.9E-129 T 23-04-2016 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 PANTHER PTHR11751:SF406 534 542 4.9E-129 T 23-04-2016 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 PANTHER PTHR11751:SF406 559 682 4.9E-129 T 23-04-2016 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 SUPERFAMILY SSF52172 36 142 3.62E-5 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 622 750 7.1E-46 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 Gene3D G3DSA:3.90.1150.10 457 638 3.0E-61 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 Gene3D G3DSA:3.40.640.10 147 453 7.7E-101 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS08865 fbe9851dbacab11a94c0b3f698b92009 761 SUPERFAMILY SSF53383 147 614 2.23E-105 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS15355 335ce172874189961c7e54e2624cdfed 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 270 7.6E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15355 335ce172874189961c7e54e2624cdfed 272 SUPERFAMILY SSF161098 15 267 1.96E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15355 335ce172874189961c7e54e2624cdfed 272 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 268 1.0E-92 T 23-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 LT40_RS15355 335ce172874189961c7e54e2624cdfed 272 PANTHER PTHR30406:SF6 1 270 1.6E-159 T 23-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 LT40_RS15355 335ce172874189961c7e54e2624cdfed 272 Gene3D G3DSA:1.10.3720.10 19 269 1.2E-51 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15355 335ce172874189961c7e54e2624cdfed 272 PANTHER PTHR30406 1 270 1.6E-159 T 23-04-2016 LT40_RS15355 335ce172874189961c7e54e2624cdfed 272 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 8 270 9.1E-128 T 23-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 LT40_RS20620 c9b94470466f8147e93491183542908f 226 SUPERFAMILY SSF53335 36 223 3.59E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS20620 c9b94470466f8147e93491183542908f 226 Pfam PF01564 Spermine/spermidine synthase 39 182 6.8E-7 T 23-04-2016 LT40_RS20620 c9b94470466f8147e93491183542908f 226 PANTHER PTHR11558 63 213 1.2E-38 T 23-04-2016 LT40_RS20620 c9b94470466f8147e93491183542908f 226 Gene3D G3DSA:3.40.50.150 65 208 1.2E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS20620 c9b94470466f8147e93491183542908f 226 PANTHER PTHR11558:SF4 63 213 1.2E-38 T 23-04-2016 LT40_RS20280 6ee08ea36884428bc7f2d1265350027f 355 Pfam PF13332 Haemagluttinin repeat 90 230 1.7E-13 T 23-04-2016 IPR025157 Haemagluttinin repeat LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 370 37.432 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 SUPERFAMILY SSF52490 14 205 2.62E-68 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 SUPERFAMILY SSF55307 204 320 1.47E-41 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 Gene3D G3DSA:3.40.50.1440 14 214 3.2E-91 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 PANTHER PTHR30314:SF3 1 395 1.9E-196 T 23-04-2016 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 Gene3D G3DSA:3.30.1330.20 215 319 3.4E-45 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 PANTHER PTHR30314 1 395 1.9E-196 T 23-04-2016 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 5.5E-39 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 SMART SM00865 207 325 2.5E-57 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 330 7.2E-127 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 Pfam PF12327 FtsZ family, C-terminal domain 222 316 5.6E-35 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 PRINTS PR00423 Cell division protein FtsZ signature 189 211 6.7E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 PRINTS PR00423 Cell division protein FtsZ signature 212 233 6.7E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 PRINTS PR00423 Cell division protein FtsZ signature 126 147 6.7E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 PRINTS PR00423 Cell division protein FtsZ signature 98 118 6.7E-51 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LT40_RS04080 57613291be5c0aaa2b0c6eb072d09846 397 SMART SM00864 13 205 4.8E-111 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 LT40_RS00145 69693b14d76f43968fd40425da1ce688 79 Pfam PF01206 Sulfurtransferase TusA 10 78 2.8E-19 T 23-04-2016 IPR001455 TusA-like domain LT40_RS00145 69693b14d76f43968fd40425da1ce688 79 Gene3D G3DSA:3.30.110.40 6 78 3.8E-25 T 23-04-2016 IPR001455 TusA-like domain LT40_RS00145 69693b14d76f43968fd40425da1ce688 79 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 11 35 - T 23-04-2016 IPR001455 TusA-like domain LT40_RS00145 69693b14d76f43968fd40425da1ce688 79 PANTHER PTHR33279 8 78 1.2E-16 T 23-04-2016 LT40_RS00145 69693b14d76f43968fd40425da1ce688 79 SUPERFAMILY SSF64307 5 78 3.53E-21 T 23-04-2016 IPR001455 TusA-like domain LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 ProSitePatterns PS01229 Hypothetical cof family signature 2. 518 540 - T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 SUPERFAMILY SSF81665 41 110 3.14E-9 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 SUPERFAMILY SSF81665 212 303 3.14E-9 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 532 9.2E-31 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 79 346 4.2E-29 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 370 606 5.4E-47 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 311 317 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 Gene3D G3DSA:3.40.50.1000 446 565 1.8E-37 T 23-04-2016 IPR023214 HAD-like domain LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 Gene3D G3DSA:3.40.1110.10 320 445 5.9E-37 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 Pfam PF00122 E1-E2 ATPase 79 300 1.8E-36 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 18 682 39.227 T 23-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 PANTHER PTHR24093 22 589 0.0 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 PANTHER PTHR24093 627 678 0.0 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 SUPERFAMILY SSF81653 117 211 1.96E-19 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 23 679 7.6E-288 T 23-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 158 172 8.0E-24 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 309 323 8.0E-24 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 443 454 8.0E-24 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 465 475 8.0E-24 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 541 553 8.0E-24 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 518 537 8.0E-24 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 SUPERFAMILY SSF56784 379 562 3.81E-39 T 23-04-2016 IPR023214 HAD-like domain LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 SUPERFAMILY SSF56784 297 321 3.81E-39 T 23-04-2016 IPR023214 HAD-like domain LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 Gene3D G3DSA:2.70.150.10 60 212 3.7E-20 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 PANTHER PTHR24093:SF49 22 589 0.0 T 23-04-2016 LT40_RS01750 4909770f71abbe197bb8a0329eb970df 684 PANTHER PTHR24093:SF49 627 678 0.0 T 23-04-2016 LT40_RS10760 624fad66eafd632c62895054822065f6 86 Pfam PF04606 Ogr/Delta-like zinc finger 8 52 3.4E-15 T 23-04-2016 IPR007684 Zinc finger, Ogr/Delta-type LT40_RS01405 b263fb2bbc1a5dcf712bf76498e11d62 660 PANTHER PTHR32089:SF55 267 660 4.8E-137 T 23-04-2016 LT40_RS01405 b263fb2bbc1a5dcf712bf76498e11d62 660 Gene3D G3DSA:1.10.287.950 414 629 7.3E-56 T 23-04-2016 LT40_RS01405 b263fb2bbc1a5dcf712bf76498e11d62 660 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 658 8.0E-44 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS01405 b263fb2bbc1a5dcf712bf76498e11d62 660 PANTHER PTHR32089 267 660 4.8E-137 T 23-04-2016 LT40_RS01405 b263fb2bbc1a5dcf712bf76498e11d62 660 SUPERFAMILY SSF58104 351 660 2.35E-72 T 23-04-2016 LT40_RS01405 b263fb2bbc1a5dcf712bf76498e11d62 660 SMART SM00304 329 383 4.8E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS01405 b263fb2bbc1a5dcf712bf76498e11d62 660 SMART SM00283 398 659 9.8E-66 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS01405 b263fb2bbc1a5dcf712bf76498e11d62 660 Pfam PF00672 HAMP domain 316 378 1.1E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS01405 b263fb2bbc1a5dcf712bf76498e11d62 660 Gene3D G3DSA:3.30.450.20 163 305 1.0E-11 T 23-04-2016 LT40_RS01405 b263fb2bbc1a5dcf712bf76498e11d62 660 Pfam PF02743 Cache domain 46 291 2.1E-19 T 23-04-2016 IPR033479 Double Cache domain 1 LT40_RS13140 1509c87fd321292b62b4143c6d18a421 332 PANTHER PTHR26402 4 116 2.7E-27 T 23-04-2016 LT40_RS13140 1509c87fd321292b62b4143c6d18a421 332 Gene3D G3DSA:3.40.1550.10 143 331 1.8E-36 T 23-04-2016 IPR028976 CheC-like domain LT40_RS13140 1509c87fd321292b62b4143c6d18a421 332 SUPERFAMILY SSF52172 1 119 9.53E-29 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS13140 1509c87fd321292b62b4143c6d18a421 332 SUPERFAMILY SSF103039 143 329 1.7E-40 T 23-04-2016 IPR028976 CheC-like domain LT40_RS13140 1509c87fd321292b62b4143c6d18a421 332 Gene3D G3DSA:3.40.50.2300 3 118 2.4E-27 T 23-04-2016 LT40_RS13140 1509c87fd321292b62b4143c6d18a421 332 Pfam PF00072 Response regulator receiver domain 7 115 7.6E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS13140 1509c87fd321292b62b4143c6d18a421 332 SMART SM00448 4 116 8.9E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 Gene3D G3DSA:3.30.450.20 183 297 1.3E-22 T 23-04-2016 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 Pfam PF00512 His Kinase A (phospho-acceptor) domain 323 386 5.4E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 SUPERFAMILY SSF52172 568 689 5.69E-26 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 Pfam PF00072 Response regulator receiver domain 571 676 3.2E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 430 547 8.2E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 Gene3D G3DSA:3.40.50.2300 569 688 7.3E-28 T 23-04-2016 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 Gene3D G3DSA:3.30.450.20 53 177 1.8E-6 T 23-04-2016 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 SMART SM00387 428 549 1.9E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 Gene3D G3DSA:1.10.287.130 314 373 2.5E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 Gene3D G3DSA:3.30.565.10 374 549 9.5E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 SMART SM00448 569 679 1.9E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 SMART SM00388 321 387 1.3E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 SUPERFAMILY SSF55874 377 548 7.2E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 SUPERFAMILY SSF47384 312 385 7.06E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 Pfam PF08448 PAS fold 199 299 2.3E-12 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 506 3.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 527 3.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 492 3.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 546 3.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 194 306 1.8E-17 T 23-04-2016 IPR000014 PAS domain LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 PANTHER PTHR24423 54 679 2.2E-171 T 23-04-2016 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 PANTHER PTHR24423:SF438 54 679 2.2E-171 T 23-04-2016 LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 SUPERFAMILY SSF55785 198 301 6.6E-20 T 23-04-2016 IPR000014 PAS domain LT40_RS07955 87e76bb191ce62a27eaa74f591202926 694 SMART SM00091 192 258 1.3E-9 T 23-04-2016 IPR000014 PAS domain LT40_RS00395 a3d9fc0ca74341202df0633370954e48 398 SUPERFAMILY SSF53383 2 396 3.2E-91 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS00395 a3d9fc0ca74341202df0633370954e48 398 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 395 6.9E-206 T 23-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 LT40_RS00395 a3d9fc0ca74341202df0633370954e48 398 Gene3D G3DSA:3.90.1150.10 266 397 8.1E-28 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS00395 a3d9fc0ca74341202df0633370954e48 398 Gene3D G3DSA:3.40.640.10 44 265 1.0E-62 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS00395 a3d9fc0ca74341202df0633370954e48 398 Pfam PF00155 Aminotransferase class I and II 32 378 2.4E-47 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS00395 a3d9fc0ca74341202df0633370954e48 398 PANTHER PTHR11751 12 397 8.8E-143 T 23-04-2016 LT40_RS00395 a3d9fc0ca74341202df0633370954e48 398 PANTHER PTHR11751:SF354 12 397 8.8E-143 T 23-04-2016 LT40_RS16460 bb165a43a7b8017cf1a5d891185f02d4 321 Pfam PF01618 MotA/TolQ/ExbB proton channel family 173 288 2.3E-34 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LT40_RS16460 bb165a43a7b8017cf1a5d891185f02d4 321 PANTHER PTHR30572:SF11 85 305 2.1E-67 T 23-04-2016 LT40_RS16460 bb165a43a7b8017cf1a5d891185f02d4 321 PANTHER PTHR30572 85 305 2.1E-67 T 23-04-2016 LT40_RS16460 bb165a43a7b8017cf1a5d891185f02d4 321 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 93 302 7.2E-105 T 23-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 LT40_RS20370 ae293a4b52abc636585f7c7d862c0efa 244 Gene3D G3DSA:3.10.450.70 26 88 4.6E-22 T 23-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal LT40_RS20370 ae293a4b52abc636585f7c7d862c0efa 244 ProSitePatterns PS00194 Thioredoxin family active site. 123 141 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LT40_RS20370 ae293a4b52abc636585f7c7d862c0efa 244 Pfam PF13098 Thioredoxin-like domain 117 238 1.3E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS20370 ae293a4b52abc636585f7c7d862c0efa 244 SUPERFAMILY SSF52833 109 237 2.98E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS20370 ae293a4b52abc636585f7c7d862c0efa 244 SUPERFAMILY SSF54423 26 87 1.83E-13 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal LT40_RS20370 ae293a4b52abc636585f7c7d862c0efa 244 PANTHER PTHR35272 1 238 4.5E-88 T 23-04-2016 LT40_RS20370 ae293a4b52abc636585f7c7d862c0efa 244 Gene3D G3DSA:3.40.30.10 117 238 3.2E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS20370 ae293a4b52abc636585f7c7d862c0efa 244 PANTHER PTHR35272:SF3 1 238 4.5E-88 T 23-04-2016 LT40_RS20370 ae293a4b52abc636585f7c7d862c0efa 244 Pfam PF10411 Disulfide bond isomerase protein N-terminus 30 83 1.2E-15 T 23-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal LT40_RS00550 1724dec38785e685d4164ed15fd67ad6 249 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 4.5E-60 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LT40_RS00550 1724dec38785e685d4164ed15fd67ad6 249 Pfam PF01975 Survival protein SurE 3 181 8.3E-53 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LT40_RS00550 1724dec38785e685d4164ed15fd67ad6 249 PANTHER PTHR30457 1 248 5.2E-89 T 23-04-2016 LT40_RS00550 1724dec38785e685d4164ed15fd67ad6 249 SUPERFAMILY SSF64167 1 247 1.44E-81 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LT40_RS00550 1724dec38785e685d4164ed15fd67ad6 249 Gene3D G3DSA:3.40.1210.10 1 246 1.1E-81 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LT40_RS00550 1724dec38785e685d4164ed15fd67ad6 249 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 248 37.467 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 222 234 - T 23-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 SUPERFAMILY SSF48179 287 489 4.76E-61 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 Gene3D G3DSA:3.40.50.720 3 285 4.1E-114 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 221 464 9.4E-94 T 23-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 28 192 1.4E-48 T 23-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 PRINTS PR00084 Mannitol dehydrogenase signature 29 39 1.9E-20 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 PRINTS PR00084 Mannitol dehydrogenase signature 222 235 1.9E-20 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 PRINTS PR00084 Mannitol dehydrogenase signature 252 267 1.9E-20 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 PRINTS PR00084 Mannitol dehydrogenase signature 183 196 1.9E-20 T 23-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 SUPERFAMILY SSF51735 1 286 8.27E-103 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 PANTHER PTHR30562 18 489 4.6E-218 T 23-04-2016 LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 PANTHER PTHR30562:SF4 18 489 4.6E-218 T 23-04-2016 LT40_RS09410 e728c43a1f376e51b1170a7a05ec329c 493 Gene3D G3DSA:1.10.1040.10 286 489 1.5E-69 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS01925 c2bf33cf551c80a698fc1793adf93614 274 PANTHER PTHR30221:SF7 1 274 2.0E-92 T 23-04-2016 LT40_RS01925 c2bf33cf551c80a698fc1793adf93614 274 Pfam PF00924 Mechanosensitive ion channel 166 271 4.0E-11 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LT40_RS01925 c2bf33cf551c80a698fc1793adf93614 274 Pfam PF05552 Conserved TM helix 15 60 2.1E-12 T 23-04-2016 IPR008910 Conserved TM helix LT40_RS01925 c2bf33cf551c80a698fc1793adf93614 274 Pfam PF05552 Conserved TM helix 109 154 1.9E-9 T 23-04-2016 IPR008910 Conserved TM helix LT40_RS01925 c2bf33cf551c80a698fc1793adf93614 274 SUPERFAMILY SSF50182 218 271 1.8E-6 T 23-04-2016 IPR010920 LSM domain LT40_RS01925 c2bf33cf551c80a698fc1793adf93614 274 Gene3D G3DSA:2.30.30.60 226 271 8.7E-10 T 23-04-2016 LT40_RS01925 c2bf33cf551c80a698fc1793adf93614 274 PANTHER PTHR30221 1 274 2.0E-92 T 23-04-2016 LT40_RS07005 a407be76f129df4839287c0272689825 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 9.9E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07005 a407be76f129df4839287c0272689825 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07005 a407be76f129df4839287c0272689825 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07005 a407be76f129df4839287c0272689825 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.8E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07005 a407be76f129df4839287c0272689825 307 Gene3D G3DSA:1.10.10.10 6 88 1.9E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07005 a407be76f129df4839287c0272689825 307 PANTHER PTHR30537:SF26 1 304 1.1E-83 T 23-04-2016 LT40_RS07005 a407be76f129df4839287c0272689825 307 Gene3D G3DSA:3.40.190.10 96 178 1.8E-22 T 23-04-2016 LT40_RS07005 a407be76f129df4839287c0272689825 307 SUPERFAMILY SSF46785 6 87 3.27E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07005 a407be76f129df4839287c0272689825 307 PANTHER PTHR30537 1 304 1.1E-83 T 23-04-2016 LT40_RS07005 a407be76f129df4839287c0272689825 307 Pfam PF03466 LysR substrate binding domain 94 297 5.5E-29 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS07005 a407be76f129df4839287c0272689825 307 Gene3D G3DSA:3.40.190.10 179 267 1.6E-17 T 23-04-2016 LT40_RS07005 a407be76f129df4839287c0272689825 307 SUPERFAMILY SSF53850 94 299 2.9E-30 T 23-04-2016 LT40_RS20040 90decee7afaa9fb33098db5149cdcf05 199 PANTHER PTHR10681 1 192 2.4E-84 T 23-04-2016 LT40_RS20040 90decee7afaa9fb33098db5149cdcf05 199 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 159 194 1.6E-13 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS20040 90decee7afaa9fb33098db5149cdcf05 199 PIRSF PIRSF000239 1 197 2.0E-52 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 LT40_RS20040 90decee7afaa9fb33098db5149cdcf05 199 Gene3D G3DSA:3.30.1020.10 161 193 3.1E-12 T 23-04-2016 LT40_RS20040 90decee7afaa9fb33098db5149cdcf05 199 SUPERFAMILY SSF52833 3 193 9.92E-65 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS20040 90decee7afaa9fb33098db5149cdcf05 199 Gene3D G3DSA:3.40.30.10 5 160 1.7E-59 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS20040 90decee7afaa9fb33098db5149cdcf05 199 Pfam PF00578 AhpC/TSA family 5 138 1.3E-33 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS20040 90decee7afaa9fb33098db5149cdcf05 199 PANTHER PTHR10681:SF22 1 192 2.4E-84 T 23-04-2016 LT40_RS18290 feffd3c9acc9154e92cad16a575c04da 122 Hamap MF_00422 Protein translocase subunit SecE [secE]. 61 119 13.704 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE LT40_RS18290 feffd3c9acc9154e92cad16a575c04da 122 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 122 2.1E-20 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LT40_RS18290 feffd3c9acc9154e92cad16a575c04da 122 PANTHER PTHR33910 1 122 7.3E-25 T 23-04-2016 LT40_RS18290 feffd3c9acc9154e92cad16a575c04da 122 Gene3D G3DSA:1.20.5.1030 62 121 8.2E-25 T 23-04-2016 LT40_RS18290 feffd3c9acc9154e92cad16a575c04da 122 PRINTS PR01650 Bacterial translocase SecE signature 107 122 1.1E-25 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LT40_RS18290 feffd3c9acc9154e92cad16a575c04da 122 PRINTS PR01650 Bacterial translocase SecE signature 42 63 1.1E-25 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LT40_RS18290 feffd3c9acc9154e92cad16a575c04da 122 PRINTS PR01650 Bacterial translocase SecE signature 63 83 1.1E-25 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LT40_RS18290 feffd3c9acc9154e92cad16a575c04da 122 PRINTS PR01650 Bacterial translocase SecE signature 87 107 1.1E-25 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LT40_RS18290 feffd3c9acc9154e92cad16a575c04da 122 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 LT40_RS18290 feffd3c9acc9154e92cad16a575c04da 122 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 71 120 1.4E-19 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 LT40_RS18290 feffd3c9acc9154e92cad16a575c04da 122 PANTHER PTHR33910:SF1 1 122 7.3E-25 T 23-04-2016 LT40_RS10450 409016a28c69fdd005982d628dcf19b4 523 PIRSF PIRSF002741 2 518 3.0E-86 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS10450 409016a28c69fdd005982d628dcf19b4 523 Gene3D G3DSA:3.90.76.10 53 207 3.8E-37 T 23-04-2016 LT40_RS10450 409016a28c69fdd005982d628dcf19b4 523 PANTHER PTHR30290 2 522 1.1E-113 T 23-04-2016 LT40_RS10450 409016a28c69fdd005982d628dcf19b4 523 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 431 7.9E-76 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS10450 409016a28c69fdd005982d628dcf19b4 523 Gene3D G3DSA:3.10.105.10 280 481 1.5E-45 T 23-04-2016 LT40_RS10450 409016a28c69fdd005982d628dcf19b4 523 SUPERFAMILY SSF53850 37 516 6.7E-122 T 23-04-2016 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 SUPERFAMILY SSF51120 1090 1195 3.79E-20 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Gene3D G3DSA:2.150.10.10 913 1065 9.7E-25 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Gene3D G3DSA:2.150.10.10 708 903 2.2E-41 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Gene3D G3DSA:2.150.10.10 1091 1206 1.3E-21 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 976 991 8.5 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 939 955 0.015 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 794 811 0.013 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 741 756 0.011 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 759 774 0.18 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 723 739 34.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 921 937 31.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 994 1007 41.0 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1130 1146 0.88 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 956 973 0.018 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1113 1129 0.058 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 777 793 0.22 T 23-04-2016 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 935 953 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1118 1136 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 800 818 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 791 809 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 773 791 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 782 800 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 PRINTS PR00313 NodO calcium binding signature 756 767 1.9E-10 T 23-04-2016 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 PRINTS PR00313 NodO calcium binding signature 768 776 1.9E-10 T 23-04-2016 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 PRINTS PR00313 NodO calcium binding signature 984 993 1.9E-10 T 23-04-2016 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 PRINTS PR00313 NodO calcium binding signature 804 812 1.9E-10 T 23-04-2016 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 Pfam PF06594 Haemolysin-type calcium binding protein related domain 860 903 7.2E-5 T 23-04-2016 IPR010566 Haemolysin-type calcium binding-related LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 SUPERFAMILY SSF51120 709 871 2.44E-31 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 SUPERFAMILY SSF51120 913 1078 1.96E-20 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 PANTHER PTHR39431 219 387 3.9E-25 T 23-04-2016 LT40_RS08095 839eca3fbeb5dbdb7935b28d28f18b9e 1378 PANTHER PTHR39431:SF1 219 387 3.9E-25 T 23-04-2016 LT40_RS14090 4dbf4abea37f35bd844760d4e07ba220 324 SUPERFAMILY SSF56112 1 322 8.16E-88 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS14090 4dbf4abea37f35bd844760d4e07ba220 324 Hamap MF_01497 Stress response kinase A [srkA]. 1 317 48.805 T 23-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LT40_RS14090 4dbf4abea37f35bd844760d4e07ba220 324 PANTHER PTHR39573 1 324 7.8E-175 T 23-04-2016 LT40_RS14090 4dbf4abea37f35bd844760d4e07ba220 324 Pfam PF01636 Phosphotransferase enzyme family 32 263 1.6E-38 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase LT40_RS14090 4dbf4abea37f35bd844760d4e07ba220 324 PANTHER PTHR39573:SF1 1 324 7.8E-175 T 23-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LT40_RS14090 4dbf4abea37f35bd844760d4e07ba220 324 Gene3D G3DSA:3.90.1200.10 103 323 5.4E-48 T 23-04-2016 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 SMART SM00278 73 92 0.72 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 SMART SM00278 108 127 0.017 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 Pfam PF07499 RuvA, C-terminal domain 158 201 1.8E-15 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 Pfam PF01330 RuvA N terminal domain 2 62 2.9E-21 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 Gene3D G3DSA:2.40.50.140 2 64 9.5E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 Gene3D G3DSA:1.10.150.20 68 140 2.3E-30 T 23-04-2016 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 PANTHER PTHR33796 2 202 2.1E-78 T 23-04-2016 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 SUPERFAMILY SSF46929 156 201 6.28E-10 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 202 31.239 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 SUPERFAMILY SSF47781 66 136 1.86E-22 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 200 2.8E-59 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 Pfam PF14520 Helix-hairpin-helix domain 72 130 6.3E-18 T 23-04-2016 LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 SUPERFAMILY SSF50249 2 63 9.14E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS04950 67d9d3a8430a7f10ea3ce157c97a31a5 202 Gene3D G3DSA:1.10.8.10 156 201 2.1E-20 T 23-04-2016 LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 PANTHER PTHR10459:SF10 141 567 2.6E-59 T 23-04-2016 LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 Gene3D G3DSA:3.30.1490.70 207 242 7.9E-15 T 23-04-2016 LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 Gene3D G3DSA:3.30.1490.70 392 437 7.9E-15 T 23-04-2016 LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 SUPERFAMILY SSF50249 442 568 2.4E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 Pfam PF01068 ATP dependent DNA ligase domain 218 437 2.2E-21 T 23-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 Pfam PF04675 DNA ligase N terminus 2 161 8.0E-18 T 23-04-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 SUPERFAMILY SSF56091 208 437 7.92E-51 T 23-04-2016 LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 Pfam PF04679 ATP dependent DNA ligase C terminal region 458 553 6.7E-10 T 23-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 Gene3D G3DSA:3.30.470.30 243 380 1.4E-29 T 23-04-2016 LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 238 246 - T 23-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 568 8.2E-218 T 23-04-2016 IPR026333 ATP-dependent DNA ligase, PP_1105 family LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 Gene3D G3DSA:2.40.50.140 442 568 1.7E-35 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS05250 5485497a2231e92e98a3ad04afaa5bb1 569 PANTHER PTHR10459 141 567 2.6E-59 T 23-04-2016 LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 Gene3D G3DSA:1.10.3410.10 245 351 5.6E-36 T 23-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 SMART SM00471 57 255 1.2E-8 T 23-04-2016 IPR003607 HD/PDEase domain LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 PANTHER PTHR11373 148 185 5.2E-81 T 23-04-2016 LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 432 7.4E-96 T 23-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 PANTHER PTHR11373 1 132 5.2E-81 T 23-04-2016 LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 Gene3D G3DSA:1.10.3550.10 113 146 2.4E-32 T 23-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 Gene3D G3DSA:1.10.3550.10 352 440 2.4E-32 T 23-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 Pfam PF01966 HD domain 61 127 7.8E-8 T 23-04-2016 IPR006674 HD domain LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 PANTHER PTHR11373:SF29 1 132 5.2E-81 T 23-04-2016 LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 PANTHER PTHR11373:SF29 148 185 5.2E-81 T 23-04-2016 LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 Gene3D G3DSA:1.10.3210.10 149 244 6.7E-65 T 23-04-2016 IPR006674 HD domain LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 Gene3D G3DSA:1.10.3210.10 5 112 6.7E-65 T 23-04-2016 IPR006674 HD domain LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 SUPERFAMILY SSF109604 21 187 1.41E-63 T 23-04-2016 LT40_RS07185 b1b861bfa4b345764669cc70ec3a018b 443 SUPERFAMILY SSF109604 224 433 1.41E-63 T 23-04-2016 LT40_RS15125 c1272e7ea9b5d97da93fd13dca45a5f5 222 Gene3D G3DSA:1.10.3720.10 15 218 8.2E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15125 c1272e7ea9b5d97da93fd13dca45a5f5 222 PANTHER PTHR30614 1 222 7.2E-89 T 23-04-2016 LT40_RS15125 c1272e7ea9b5d97da93fd13dca45a5f5 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 217 4.2E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15125 c1272e7ea9b5d97da93fd13dca45a5f5 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 110 2.8E-31 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS15125 c1272e7ea9b5d97da93fd13dca45a5f5 222 PANTHER PTHR30614:SF14 1 222 7.2E-89 T 23-04-2016 LT40_RS15125 c1272e7ea9b5d97da93fd13dca45a5f5 222 SUPERFAMILY SSF161098 15 202 1.96E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15125 c1272e7ea9b5d97da93fd13dca45a5f5 222 TIGRFAM TIGR03003 ectoine_ehuD: ectoine/hydroxyectoine ABC transporter, permease protein EhuD 10 216 2.0E-61 T 23-04-2016 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 SUPERFAMILY SSF46977 425 525 5.23E-31 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.4E-7 T 23-04-2016 LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 4.4E-7 T 23-04-2016 LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 PIRSF PIRSF000171 2 531 1.4E-35 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 Gene3D G3DSA:3.50.50.60 4 243 1.6E-96 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 Gene3D G3DSA:3.50.50.60 349 411 1.6E-96 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 6 520 7.6E-195 T 23-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 SUPERFAMILY SSF51905 356 448 3.31E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 SUPERFAMILY SSF51905 5 255 3.31E-71 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 PANTHER PTHR11632:SF27 4 533 1.8E-257 T 23-04-2016 LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 Gene3D G3DSA:3.90.700.10 244 348 2.1E-39 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 Pfam PF00890 FAD binding domain 8 392 1.3E-97 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 1.2E-13 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 SUPERFAMILY SSF56425 238 353 2.99E-42 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 Gene3D G3DSA:1.20.58.100 420 521 5.5E-32 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LT40_RS04600 f6f2b8d4a30e27a1b92689c50dd92cd7 538 PANTHER PTHR11632 4 533 1.8E-257 T 23-04-2016 LT40_RS15375 30c826044560629f07f378d6b24c65d1 394 Pfam PF00487 Fatty acid desaturase 11 214 8.7E-13 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 LT40_RS15375 30c826044560629f07f378d6b24c65d1 394 PANTHER PTHR11351 12 374 4.6E-195 T 23-04-2016 LT40_RS15375 30c826044560629f07f378d6b24c65d1 394 PANTHER PTHR11351:SF33 12 374 4.6E-195 T 23-04-2016 LT40_RS15375 30c826044560629f07f378d6b24c65d1 394 Pfam PF01610 Transposase 271 387 5.2E-8 T 23-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain LT40_RS20440 fc283f60dbc500162610ddf95b181001 171 PANTHER PTHR22617:SF33 13 165 1.2E-34 T 23-04-2016 LT40_RS20440 fc283f60dbc500162610ddf95b181001 171 PANTHER PTHR22617 13 165 1.2E-34 T 23-04-2016 LT40_RS20440 fc283f60dbc500162610ddf95b181001 171 SUPERFAMILY SSF50341 13 152 7.19E-26 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS20440 fc283f60dbc500162610ddf95b181001 171 SMART SM00260 8 149 2.5E-13 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS20440 fc283f60dbc500162610ddf95b181001 171 Pfam PF01584 CheW-like domain 13 150 1.9E-25 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS04965 973901f67ad4795fde61f731483e2275 231 PANTHER PTHR30625:SF3 10 231 4.9E-77 T 23-04-2016 LT40_RS04965 973901f67ad4795fde61f731483e2275 231 PANTHER PTHR30625 10 231 4.9E-77 T 23-04-2016 LT40_RS04965 973901f67ad4795fde61f731483e2275 231 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 211 8.4E-45 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LT40_RS04965 973901f67ad4795fde61f731483e2275 231 TIGRFAM TIGR02796 tolQ: protein TolQ 10 224 5.0E-92 T 23-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 LT40_RS01560 fe423070ecc83e213e3f8b2e4383dbe3 146 Pfam PF00583 Acetyltransferase (GNAT) family 46 121 1.8E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS01560 fe423070ecc83e213e3f8b2e4383dbe3 146 SUPERFAMILY SSF55729 16 141 2.44E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS01560 fe423070ecc83e213e3f8b2e4383dbe3 146 Gene3D G3DSA:3.40.630.30 25 127 3.4E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS06700 3ad069612c3da9b3fd59a42e0c86f09c 330 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 4 322 2.9E-109 T 23-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 LT40_RS06700 3ad069612c3da9b3fd59a42e0c86f09c 330 Gene3D G3DSA:3.90.1150.10 221 305 6.1E-6 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS06700 3ad069612c3da9b3fd59a42e0c86f09c 330 SUPERFAMILY SSF53383 3 324 1.34E-52 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS06700 3ad069612c3da9b3fd59a42e0c86f09c 330 Pfam PF00155 Aminotransferase class I and II 55 311 1.3E-27 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS06700 3ad069612c3da9b3fd59a42e0c86f09c 330 PANTHER PTHR11751:SF3 3 328 2.2E-51 T 23-04-2016 LT40_RS06700 3ad069612c3da9b3fd59a42e0c86f09c 330 PANTHER PTHR11751 3 328 2.2E-51 T 23-04-2016 LT40_RS06700 3ad069612c3da9b3fd59a42e0c86f09c 330 Gene3D G3DSA:3.40.640.10 43 220 4.4E-44 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 969 983 3.0E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1049 1062 3.0E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1025 1043 3.0E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SMART SM00387 924 1065 6.6E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Gene3D G3DSA:3.40.50.2300 1221 1340 7.5E-40 T 23-04-2016 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Gene3D G3DSA:2.30.30.40 1065 1086 3.0E-21 T 23-04-2016 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Gene3D G3DSA:2.30.30.40 1156 1198 3.0E-21 T 23-04-2016 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SMART SM00073 594 692 4.7E-8 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SMART SM00073 271 367 0.072 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SUPERFAMILY SSF47226 595 713 5.63E-26 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SUPERFAMILY SSF47226 271 392 9.81E-17 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SUPERFAMILY SSF47226 411 531 6.47E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SUPERFAMILY SSF55874 881 1062 4.32E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 928 1064 1.1E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SMART SM00448 1223 1336 2.6E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Pfam PF00072 Response regulator receiver domain 1225 1336 7.0E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 PANTHER PTHR22617 595 791 8.5E-179 T 23-04-2016 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 PANTHER PTHR22617 37 43 8.5E-179 T 23-04-2016 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 PANTHER PTHR22617 857 1217 8.5E-179 T 23-04-2016 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SUPERFAMILY SSF52172 1222 1340 2.7E-39 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 PANTHER PTHR22617:SF28 595 791 8.5E-179 T 23-04-2016 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 PANTHER PTHR22617:SF28 37 43 8.5E-179 T 23-04-2016 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 PANTHER PTHR22617:SF28 857 1217 8.5E-179 T 23-04-2016 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Gene3D G3DSA:3.30.565.10 880 1063 5.4E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SMART SM01231 742 879 7.0E-10 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SUPERFAMILY SSF47226 121 243 3.27E-8 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Pfam PF01584 CheW-like domain 1070 1202 8.2E-22 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Pfam PF01627 Hpt domain 273 358 3.6E-8 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Pfam PF01627 Hpt domain 597 696 2.4E-14 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SMART SM00260 1057 1201 2.5E-28 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Gene3D G3DSA:1.20.120.160 271 395 1.3E-17 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Gene3D G3DSA:1.20.120.160 592 729 5.1E-32 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Gene3D G3DSA:1.20.120.160 411 538 4.4E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Gene3D G3DSA:1.10.287.560 744 797 8.0E-6 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 SUPERFAMILY SSF50341 1064 1197 9.55E-23 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS14525 ca9e58471682c88fa84857dbe8359254 1344 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 743 805 1.3E-4 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 LT40_RS16325 ef493c4fa00a58c5d87d999713cc3f07 360 SUPERFAMILY SSF52440 2 94 9.35E-23 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS16325 ef493c4fa00a58c5d87d999713cc3f07 360 Pfam PF02222 ATP-grasp domain 106 272 5.8E-57 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 LT40_RS16325 ef493c4fa00a58c5d87d999713cc3f07 360 Gene3D G3DSA:3.30.1490.20 98 139 1.4E-5 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS16325 ef493c4fa00a58c5d87d999713cc3f07 360 Gene3D G3DSA:3.30.470.20 140 359 3.1E-73 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS16325 ef493c4fa00a58c5d87d999713cc3f07 360 PANTHER PTHR11609:SF8 1 354 5.3E-152 T 23-04-2016 LT40_RS16325 ef493c4fa00a58c5d87d999713cc3f07 360 Gene3D G3DSA:3.40.50.20 2 97 3.2E-27 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS16325 ef493c4fa00a58c5d87d999713cc3f07 360 SUPERFAMILY SSF56059 97 292 1.68E-56 T 23-04-2016 LT40_RS16325 ef493c4fa00a58c5d87d999713cc3f07 360 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 344 39.706 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 LT40_RS16325 ef493c4fa00a58c5d87d999713cc3f07 360 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 2 349 1.1E-109 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 LT40_RS16325 ef493c4fa00a58c5d87d999713cc3f07 360 SUPERFAMILY SSF51246 297 357 8.63E-14 T 23-04-2016 IPR011054 Rudiment single hybrid motif LT40_RS16325 ef493c4fa00a58c5d87d999713cc3f07 360 PANTHER PTHR11609 1 354 5.3E-152 T 23-04-2016 LT40_RS03640 9a086617580b147efdd3aac0cd1080f3 236 Pfam PF04402 Protein of unknown function (DUF541) 32 226 2.6E-25 T 23-04-2016 IPR007497 Protein of unknown function DUF541 LT40_RS15825 bf815dbca849b0592316beaec4b6fc5f 412 PANTHER PTHR11804:SF8 14 367 1.6E-53 T 23-04-2016 LT40_RS15825 bf815dbca849b0592316beaec4b6fc5f 412 SUPERFAMILY SSF55486 15 360 6.72E-45 T 23-04-2016 LT40_RS15825 bf815dbca849b0592316beaec4b6fc5f 412 PANTHER PTHR11804 14 367 1.6E-53 T 23-04-2016 LT40_RS15825 bf815dbca849b0592316beaec4b6fc5f 412 Pfam PF01432 Peptidase family M3 238 364 1.4E-20 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 LT40_RS15825 bf815dbca849b0592316beaec4b6fc5f 412 Gene3D G3DSA:1.20.1050.40 29 148 2.9E-6 T 23-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal LT40_RS15825 bf815dbca849b0592316beaec4b6fc5f 412 Gene3D G3DSA:1.10.1370.10 154 355 2.8E-37 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LT40_RS13620 9b2ccffe3b80f28b6cc5a693a925f76a 690 Pfam PF05170 AsmA family 1 574 4.1E-147 T 23-04-2016 IPR007844 AsmA LT40_RS13620 9b2ccffe3b80f28b6cc5a693a925f76a 690 PANTHER PTHR30441:SF2 5 683 2.1E-145 T 23-04-2016 LT40_RS13620 9b2ccffe3b80f28b6cc5a693a925f76a 690 PANTHER PTHR30441 5 683 2.1E-145 T 23-04-2016 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 SUPERFAMILY SSF52343 109 258 3.67E-33 T 23-04-2016 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 PANTHER PTHR19370:SF98 1 242 7.5E-106 T 23-04-2016 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 SUPERFAMILY SSF63380 7 103 1.63E-21 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 PANTHER PTHR19370 1 242 7.5E-106 T 23-04-2016 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 219 227 2.6E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 56 63 2.6E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 2.6E-6 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 Pfam PF00175 Oxidoreductase NAD-binding domain 117 233 3.2E-13 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 Gene3D G3DSA:3.40.50.80 105 258 7.2E-42 T 23-04-2016 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 Pfam PF00970 Oxidoreductase FAD-binding domain 24 95 9.2E-8 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 219 227 5.5E-6 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 116 135 5.5E-6 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 141 150 5.5E-6 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 PRINTS PR00410 Phenol hydroxylase reductase family signature 36 48 5.5E-6 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS19300 0965c3c4db826838bcdb75d4ffd43499 258 Gene3D G3DSA:2.40.30.10 7 98 5.3E-27 T 23-04-2016 LT40_RS09465 95d1c87b4642450a0bebecf7283a00b8 191 Gene3D G3DSA:3.40.50.180 3 186 1.4E-62 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS09465 95d1c87b4642450a0bebecf7283a00b8 191 PANTHER PTHR24421 5 180 3.4E-44 T 23-04-2016 LT40_RS09465 95d1c87b4642450a0bebecf7283a00b8 191 SUPERFAMILY SSF52738 3 187 1.96E-55 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS09465 95d1c87b4642450a0bebecf7283a00b8 191 Pfam PF01339 CheB methylesterase 7 180 1.8E-53 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 LT40_RS09465 95d1c87b4642450a0bebecf7283a00b8 191 PANTHER PTHR24421:SF16 5 180 3.4E-44 T 23-04-2016 LT40_RS02745 680a693b6aba5a9befca7025d6926fd8 380 PANTHER PTHR30365 1 380 3.0E-158 T 23-04-2016 LT40_RS02745 680a693b6aba5a9befca7025d6926fd8 380 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 1.5E-103 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LT40_RS02745 680a693b6aba5a9befca7025d6926fd8 380 PANTHER PTHR30365:SF6 1 380 3.0E-158 T 23-04-2016 LT40_RS02745 680a693b6aba5a9befca7025d6926fd8 380 PIRSF PIRSF000267 2 379 1.2E-121 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LT40_RS02745 680a693b6aba5a9befca7025d6926fd8 380 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 380 6.0E-150 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LT40_RS12490 404b365e27d1a47fbdd9106b4cb8dad5 136 SUPERFAMILY SSF158634 1 135 6.41E-44 T 23-04-2016 LT40_RS12490 404b365e27d1a47fbdd9106b4cb8dad5 136 Pfam PF12200 Domain of unknown function (DUF3597) 4 131 2.2E-46 T 23-04-2016 IPR022016 Domain of unknown function DUF3597 LT40_RS01415 8a1fa2cbc9f84e39f14199f35db2063b 528 Pfam PF00990 Diguanylate cyclase, GGDEF domain 104 256 2.4E-35 T 23-04-2016 IPR000160 GGDEF domain LT40_RS01415 8a1fa2cbc9f84e39f14199f35db2063b 528 Gene3D G3DSA:3.30.70.270 105 268 2.3E-45 T 23-04-2016 LT40_RS01415 8a1fa2cbc9f84e39f14199f35db2063b 528 SUPERFAMILY SSF55073 109 263 1.49E-37 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS01415 8a1fa2cbc9f84e39f14199f35db2063b 528 SMART SM00267 93 262 4.6E-45 T 23-04-2016 IPR000160 GGDEF domain LT40_RS01415 8a1fa2cbc9f84e39f14199f35db2063b 528 SUPERFAMILY SSF141868 277 517 7.45E-77 T 23-04-2016 IPR001633 EAL domain LT40_RS01415 8a1fa2cbc9f84e39f14199f35db2063b 528 PANTHER PTHR33121:SF13 252 517 2.2E-67 T 23-04-2016 LT40_RS01415 8a1fa2cbc9f84e39f14199f35db2063b 528 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 103 258 4.2E-32 T 23-04-2016 IPR000160 GGDEF domain LT40_RS01415 8a1fa2cbc9f84e39f14199f35db2063b 528 Gene3D G3DSA:3.20.20.450 275 517 7.6E-81 T 23-04-2016 IPR001633 EAL domain LT40_RS01415 8a1fa2cbc9f84e39f14199f35db2063b 528 PANTHER PTHR33121 252 517 2.2E-67 T 23-04-2016 LT40_RS01415 8a1fa2cbc9f84e39f14199f35db2063b 528 Pfam PF00563 EAL domain 278 506 3.9E-67 T 23-04-2016 IPR001633 EAL domain LT40_RS01415 8a1fa2cbc9f84e39f14199f35db2063b 528 SMART SM00052 272 512 4.9E-91 T 23-04-2016 IPR001633 EAL domain LT40_RS08550 55acf71ab700958f13e426089319e43e 315 PANTHER PTHR36838 1 312 1.7E-35 T 23-04-2016 LT40_RS08550 55acf71ab700958f13e426089319e43e 315 Pfam PF03547 Membrane transport protein 159 305 4.7E-17 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 LT40_RS08550 55acf71ab700958f13e426089319e43e 315 Pfam PF03547 Membrane transport protein 8 150 2.9E-11 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 LT40_RS17700 feb09da6f801503e5a4ccad38331457a 476 SUPERFAMILY SSF56112 290 438 2.85E-13 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS17700 feb09da6f801503e5a4ccad38331457a 476 SUPERFAMILY SSF56112 47 170 5.33E-13 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS17700 feb09da6f801503e5a4ccad38331457a 476 Gene3D G3DSA:1.10.510.10 397 444 1.5E-6 T 23-04-2016 LT40_RS17700 feb09da6f801503e5a4ccad38331457a 476 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 68 170 2.9E-6 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 LT40_RS17700 feb09da6f801503e5a4ccad38331457a 476 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 338 440 3.4E-12 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 LT40_RS00705 698e1bd911b04a6bd91c068bd01b579e 312 Pfam PF00698 Acyl transferase domain 7 276 1.6E-41 T 23-04-2016 IPR014043 Acyl transferase LT40_RS00705 698e1bd911b04a6bd91c068bd01b579e 312 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 290 2.5E-113 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 LT40_RS00705 698e1bd911b04a6bd91c068bd01b579e 312 Gene3D G3DSA:3.30.70.250 126 197 3.6E-30 T 23-04-2016 LT40_RS00705 698e1bd911b04a6bd91c068bd01b579e 312 SUPERFAMILY SSF52151 199 302 3.66E-76 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LT40_RS00705 698e1bd911b04a6bd91c068bd01b579e 312 SUPERFAMILY SSF52151 5 129 3.66E-76 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LT40_RS00705 698e1bd911b04a6bd91c068bd01b579e 312 PIRSF PIRSF000446 2 310 1.2E-117 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 LT40_RS00705 698e1bd911b04a6bd91c068bd01b579e 312 Gene3D G3DSA:3.40.366.10 198 301 1.0E-71 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LT40_RS00705 698e1bd911b04a6bd91c068bd01b579e 312 Gene3D G3DSA:3.40.366.10 4 123 1.0E-71 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LT40_RS00705 698e1bd911b04a6bd91c068bd01b579e 312 PANTHER PTHR10982 4 302 6.9E-145 T 23-04-2016 LT40_RS00705 698e1bd911b04a6bd91c068bd01b579e 312 SUPERFAMILY SSF55048 129 198 6.28E-18 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 LT40_RS00705 698e1bd911b04a6bd91c068bd01b579e 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 311 1.9E-39 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 SMART SM00382 54 181 1.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 PANTHER PTHR13779:SF25 2 336 8.4E-188 T 23-04-2016 LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 Gene3D G3DSA:1.10.8.60 186 258 1.5E-33 T 23-04-2016 LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 SUPERFAMILY SSF52540 23 254 5.26E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 Gene3D G3DSA:3.40.50.300 23 178 2.4E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 PANTHER PTHR13779 2 336 8.4E-188 T 23-04-2016 LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 Gene3D G3DSA:1.10.10.10 260 331 7.0E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 238 3.5E-116 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.5E-33 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 351 181.661 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.7E-150 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 SUPERFAMILY SSF46785 260 333 3.27E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04955 0a69123aabf84e648a8c5a8fcac7e7e0 351 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 336 1.0E-39 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 LT40_RS01400 bda8f992c6e9f881992290e0df078056 211 PANTHER PTHR14119:SF11 1 203 1.8E-120 T 23-04-2016 LT40_RS01400 bda8f992c6e9f881992290e0df078056 211 SUPERFAMILY SSF52499 5 202 6.15E-53 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS01400 bda8f992c6e9f881992290e0df078056 211 PANTHER PTHR14119 1 203 1.8E-120 T 23-04-2016 LT40_RS01400 bda8f992c6e9f881992290e0df078056 211 Gene3D G3DSA:3.40.50.850 6 204 1.1E-47 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS01400 bda8f992c6e9f881992290e0df078056 211 Pfam PF00857 Isochorismatase family 16 165 5.9E-22 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 PIRSF PIRSF005962 1 394 1.0E-110 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 Gene3D G3DSA:3.40.630.10 300 391 4.7E-92 T 23-04-2016 LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 Gene3D G3DSA:3.40.630.10 3 180 4.7E-92 T 23-04-2016 LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 SUPERFAMILY SSF55031 188 293 7.33E-30 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 SUPERFAMILY SSF53187 6 199 1.2E-82 T 23-04-2016 LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 SUPERFAMILY SSF53187 300 390 1.2E-82 T 23-04-2016 LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 PANTHER PTHR11014:SF63 19 394 3.3E-131 T 23-04-2016 LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 19 378 4.8E-98 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 Gene3D G3DSA:3.30.70.360 183 299 3.5E-37 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 PANTHER PTHR11014 19 394 3.3E-131 T 23-04-2016 LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 Pfam PF01546 Peptidase family M20/M25/M40 75 387 1.3E-33 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LT40_RS04660 b7a1d79e8ee195a4caccf5a2192baa7b 395 Pfam PF07687 Peptidase dimerisation domain 190 279 3.3E-10 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS15680 338752461d1c5967372ee1ab02104753 211 PANTHER PTHR35891:SF2 1 211 1.1E-73 T 23-04-2016 LT40_RS15680 338752461d1c5967372ee1ab02104753 211 Pfam PF01323 DSBA-like thioredoxin domain 97 184 1.9E-15 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 LT40_RS15680 338752461d1c5967372ee1ab02104753 211 PANTHER PTHR35891 1 211 1.1E-73 T 23-04-2016 LT40_RS15680 338752461d1c5967372ee1ab02104753 211 ProSitePatterns PS00194 Thioredoxin family active site. 50 68 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LT40_RS15680 338752461d1c5967372ee1ab02104753 211 SUPERFAMILY SSF52833 27 205 3.13E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS15680 338752461d1c5967372ee1ab02104753 211 Gene3D G3DSA:3.40.30.10 27 206 1.8E-60 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS15680 338752461d1c5967372ee1ab02104753 211 PIRSF PIRSF001488 1 211 2.3E-72 T 23-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL LT40_RS03150 b8342d7fea185eac9e944b087fc65a5e 159 Pfam PF06271 RDD family 14 148 8.1E-27 T 23-04-2016 IPR010432 RDD LT40_RS03150 b8342d7fea185eac9e944b087fc65a5e 159 PANTHER PTHR36115:SF2 14 156 5.5E-42 T 23-04-2016 LT40_RS03150 b8342d7fea185eac9e944b087fc65a5e 159 PANTHER PTHR36115 14 156 5.5E-42 T 23-04-2016 LT40_RS12610 066b2c2b26859a2e40e9e33ed86bce8d 200 Gene3D G3DSA:3.30.530.20 18 199 3.7E-39 T 23-04-2016 IPR023393 START-like domain LT40_RS12610 066b2c2b26859a2e40e9e33ed86bce8d 200 PANTHER PTHR19308 1 200 2.0E-77 T 23-04-2016 LT40_RS12610 066b2c2b26859a2e40e9e33ed86bce8d 200 PANTHER PTHR19308:SF1 1 200 2.0E-77 T 23-04-2016 LT40_RS12610 066b2c2b26859a2e40e9e33ed86bce8d 200 PIRSF PIRSF039033 1 200 8.3E-74 T 23-04-2016 IPR028347 START domain-containing protein LT40_RS12610 066b2c2b26859a2e40e9e33ed86bce8d 200 Pfam PF01852 START domain 22 194 2.0E-10 T 23-04-2016 IPR002913 START domain GO:0008289 LT40_RS12610 066b2c2b26859a2e40e9e33ed86bce8d 200 SUPERFAMILY SSF55961 19 199 4.05E-39 T 23-04-2016 LT40_RS03240 8183d65d5de798aa4bcbce63a8c510a1 281 PANTHER PTHR32243:SF23 4 281 5.7E-138 T 23-04-2016 LT40_RS03240 8183d65d5de798aa4bcbce63a8c510a1 281 Gene3D G3DSA:1.10.3720.10 12 266 9.1E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03240 8183d65d5de798aa4bcbce63a8c510a1 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 274 5.5E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03240 8183d65d5de798aa4bcbce63a8c510a1 281 SUPERFAMILY SSF161098 13 281 2.9E-61 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03240 8183d65d5de798aa4bcbce63a8c510a1 281 PANTHER PTHR32243 4 281 5.7E-138 T 23-04-2016 LT40_RS18640 dd569d5f1cad9306d467871c2d62bb92 304 PANTHER PTHR22911 1 304 1.1E-34 T 23-04-2016 LT40_RS18640 dd569d5f1cad9306d467871c2d62bb92 304 SUPERFAMILY SSF103481 47 148 7.06E-15 T 23-04-2016 LT40_RS18640 dd569d5f1cad9306d467871c2d62bb92 304 Pfam PF00892 EamA-like transporter family 12 145 3.0E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS18640 dd569d5f1cad9306d467871c2d62bb92 304 SUPERFAMILY SSF103481 218 303 1.24E-9 T 23-04-2016 LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 Gene3D G3DSA:3.60.20.10 2 236 2.5E-79 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 611 40.87 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 Pfam PF01380 SIS domain 464 593 6.1E-26 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 Pfam PF01380 SIS domain 291 419 6.6E-30 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 Pfam PF13522 Glutamine amidotransferase domain 67 183 6.3E-20 T 23-04-2016 LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 PANTHER PTHR10937 1 611 0.0 T 23-04-2016 LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 Gene3D G3DSA:3.40.50.10490 445 611 5.4E-66 T 23-04-2016 LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 SUPERFAMILY SSF56235 2 235 2.49E-73 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 PANTHER PTHR10937:SF0 1 611 0.0 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 SUPERFAMILY SSF53697 246 611 3.15E-115 T 23-04-2016 LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 611 1.1E-258 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 LT40_RS16145 3d49147f03faa8dc2c9f4b42586c1c3b 611 Gene3D G3DSA:3.40.50.10490 245 444 2.1E-76 T 23-04-2016 LT40_RS08000 cea76d6177f7aa1a16aecd55fb2ad090 254 Pfam PF00455 DeoR C terminal sensor domain 77 235 1.6E-49 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain LT40_RS08000 cea76d6177f7aa1a16aecd55fb2ad090 254 Gene3D G3DSA:3.40.50.1360 78 216 1.1E-9 T 23-04-2016 LT40_RS08000 cea76d6177f7aa1a16aecd55fb2ad090 254 PANTHER PTHR30363 2 241 4.9E-87 T 23-04-2016 LT40_RS08000 cea76d6177f7aa1a16aecd55fb2ad090 254 SUPERFAMILY SSF100950 77 238 1.47E-29 T 23-04-2016 LT40_RS08000 cea76d6177f7aa1a16aecd55fb2ad090 254 PANTHER PTHR30363:SF8 2 241 4.9E-87 T 23-04-2016 LT40_RS08000 cea76d6177f7aa1a16aecd55fb2ad090 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 54 3.6E-10 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LT40_RS08000 cea76d6177f7aa1a16aecd55fb2ad090 254 SMART SM00420 8 57 5.2E-6 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LT40_RS08000 cea76d6177f7aa1a16aecd55fb2ad090 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LT40_RS08000 cea76d6177f7aa1a16aecd55fb2ad090 254 Gene3D G3DSA:1.10.10.10 3 53 1.2E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08000 cea76d6177f7aa1a16aecd55fb2ad090 254 SMART SM01134 75 236 2.1E-66 T 23-04-2016 LT40_RS08000 cea76d6177f7aa1a16aecd55fb2ad090 254 SUPERFAMILY SSF46785 5 44 1.16E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 Gene3D G3DSA:3.40.47.10 11 130 7.1E-45 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 Gene3D G3DSA:3.40.47.10 217 291 7.1E-45 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 PANTHER PTHR18919 6 429 2.8E-169 T 23-04-2016 LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 PANTHER PTHR18919:SF5 6 429 2.8E-169 T 23-04-2016 LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 Pfam PF02803 Thiolase, C-terminal domain 289 429 8.9E-29 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 PIRSF PIRSF000429 5 429 3.0E-95 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 Gene3D G3DSA:3.40.47.10 173 216 4.0E-41 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 Gene3D G3DSA:3.40.47.10 298 428 4.0E-41 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 SUPERFAMILY SSF53901 289 429 2.77E-28 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 SUPERFAMILY SSF53901 11 286 3.84E-53 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 13 428 1.2E-111 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LT40_RS13350 e19cda1292983c15d497a7fcb27e7ba2 429 Pfam PF00108 Thiolase, N-terminal domain 11 278 3.9E-45 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LT40_RS07905 9250def8f0ce9bb8605eae0dec9d7cef 139 PANTHER PTHR33797 1 139 4.3E-73 T 23-04-2016 LT40_RS07905 9250def8f0ce9bb8605eae0dec9d7cef 139 Pfam PF02566 OsmC-like protein 40 135 9.5E-17 T 23-04-2016 IPR003718 OsmC/Ohr family LT40_RS07905 9250def8f0ce9bb8605eae0dec9d7cef 139 Gene3D G3DSA:3.30.300.20 45 138 1.3E-37 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta LT40_RS07905 9250def8f0ce9bb8605eae0dec9d7cef 139 Gene3D G3DSA:2.20.25.10 1 43 6.7E-23 T 23-04-2016 LT40_RS07905 9250def8f0ce9bb8605eae0dec9d7cef 139 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 137 4.8E-57 T 23-04-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 LT40_RS07905 9250def8f0ce9bb8605eae0dec9d7cef 139 SUPERFAMILY SSF82784 1 138 1.44E-45 T 23-04-2016 IPR003718 OsmC/Ohr family LT40_RS07905 9250def8f0ce9bb8605eae0dec9d7cef 139 PANTHER PTHR33797:SF2 1 139 4.3E-73 T 23-04-2016 LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 Pfam PF00875 DNA photolyase 3 166 1.8E-45 T 23-04-2016 IPR006050 DNA photolyase, N-terminal LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 PANTHER PTHR11455 1 471 2.0E-200 T 23-04-2016 LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 Gene3D G3DSA:3.40.50.620 2 145 1.0E-44 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 SUPERFAMILY SSF48173 194 467 4.19E-104 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 Gene3D G3DSA:1.10.579.10 286 468 6.9E-75 T 23-04-2016 LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 SUPERFAMILY SSF52425 2 183 8.5E-52 T 23-04-2016 IPR006050 DNA photolyase, N-terminal LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 PANTHER PTHR11455:SF18 1 471 2.0E-200 T 23-04-2016 LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 Gene3D G3DSA:1.25.40.80 146 285 2.0E-40 T 23-04-2016 LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 325 337 - T 23-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 Pfam PF03441 FAD binding domain of DNA photolyase 275 466 6.8E-81 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 PRINTS PR00147 DNA photolyase signature 325 341 1.2E-22 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 PRINTS PR00147 DNA photolyase signature 384 398 1.2E-22 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 LT40_RS19860 8eb3f93b322a71960653cf1cfac5f79d 473 PRINTS PR00147 DNA photolyase signature 345 363 1.2E-22 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 LT40_RS17670 eaaa594291789154476768d5d472654c 349 PANTHER PTHR30160:SF7 1 347 1.2E-102 T 23-04-2016 LT40_RS17670 eaaa594291789154476768d5d472654c 349 PANTHER PTHR30160 1 347 1.2E-102 T 23-04-2016 LT40_RS17670 eaaa594291789154476768d5d472654c 349 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 336 6.8E-161 T 23-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 LT40_RS17670 eaaa594291789154476768d5d472654c 349 SUPERFAMILY SSF53756 1 336 9.87E-100 T 23-04-2016 LT40_RS17670 eaaa594291789154476768d5d472654c 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 318 2.9E-86 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 LT40_RS17670 eaaa594291789154476768d5d472654c 349 Gene3D G3DSA:3.40.50.2000 162 336 1.4E-55 T 23-04-2016 LT40_RS17670 eaaa594291789154476768d5d472654c 349 Gene3D G3DSA:3.40.50.2000 1 143 1.3E-52 T 23-04-2016 LT40_RS16880 822ffc2c14d366b0941177862d2ea586 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 1.9E-171 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 LT40_RS16880 822ffc2c14d366b0941177862d2ea586 488 Gene3D G3DSA:1.20.5.570 455 487 1.1E-16 T 23-04-2016 LT40_RS16880 822ffc2c14d366b0941177862d2ea586 488 PANTHER PTHR30108:SF1 1 488 4.4E-268 T 23-04-2016 LT40_RS16880 822ffc2c14d366b0941177862d2ea586 488 Gene3D G3DSA:3.40.1670.10 337 453 5.2E-55 T 23-04-2016 LT40_RS16880 822ffc2c14d366b0941177862d2ea586 488 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 72.031 T 23-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 LT40_RS16880 822ffc2c14d366b0941177862d2ea586 488 SUPERFAMILY SSF50475 3 322 1.06E-124 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS16880 822ffc2c14d366b0941177862d2ea586 488 PANTHER PTHR30108 1 488 4.4E-268 T 23-04-2016 LT40_RS16880 822ffc2c14d366b0941177862d2ea586 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 7.3E-172 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 LT40_RS16880 822ffc2c14d366b0941177862d2ea586 488 SUPERFAMILY SSF143968 323 487 1.7E-66 T 23-04-2016 LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 3.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.5E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 1.1E-74 T 23-04-2016 LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 PANTHER PTHR24322 152 182 1.3E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 PANTHER PTHR24322 11 136 1.3E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.4E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.4E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.4E-14 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 Gene3D G3DSA:3.40.50.720 1 248 1.7E-93 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 183 6.5E-5 T 23-04-2016 LT40_RS01240 d50b58ee040fdc02a9fa97ce85777cec 254 SUPERFAMILY SSF51735 5 246 1.11E-88 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS01630 94b1d1bcb781a876f7816342060a6d4f 412 Gene3D G3DSA:3.40.50.2300 151 334 2.0E-52 T 23-04-2016 LT40_RS01630 94b1d1bcb781a876f7816342060a6d4f 412 Gene3D G3DSA:3.40.50.2300 36 150 2.7E-4 T 23-04-2016 LT40_RS01630 94b1d1bcb781a876f7816342060a6d4f 412 PANTHER PTHR30483:SF8 1 401 2.4E-70 T 23-04-2016 LT40_RS01630 94b1d1bcb781a876f7816342060a6d4f 412 Pfam PF13433 Periplasmic binding protein domain 36 383 2.0E-76 T 23-04-2016 LT40_RS01630 94b1d1bcb781a876f7816342060a6d4f 412 SUPERFAMILY SSF53822 36 382 2.83E-84 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS01630 94b1d1bcb781a876f7816342060a6d4f 412 PANTHER PTHR30483 1 401 2.4E-70 T 23-04-2016 LT40_RS18440 5c4a9cb7fd05d5f5f640206b55775790 166 SUPERFAMILY SSF54768 9 77 5.96E-23 T 23-04-2016 LT40_RS18440 5c4a9cb7fd05d5f5f640206b55775790 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site LT40_RS18440 5c4a9cb7fd05d5f5f640206b55775790 166 PANTHER PTHR13718 10 165 8.5E-73 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 LT40_RS18440 5c4a9cb7fd05d5f5f640206b55775790 166 Gene3D G3DSA:3.30.230.10 78 159 1.8E-31 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS18440 5c4a9cb7fd05d5f5f640206b55775790 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 33.574 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 LT40_RS18440 5c4a9cb7fd05d5f5f640206b55775790 166 Gene3D G3DSA:3.30.160.20 11 73 3.2E-28 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain LT40_RS18440 5c4a9cb7fd05d5f5f640206b55775790 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 89 158 8.5E-31 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 LT40_RS18440 5c4a9cb7fd05d5f5f640206b55775790 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 11 164 2.0E-64 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 LT40_RS18440 5c4a9cb7fd05d5f5f640206b55775790 166 SUPERFAMILY SSF54211 81 159 1.92E-25 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS18440 5c4a9cb7fd05d5f5f640206b55775790 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 75 2.6E-27 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 LT40_RS05900 6e97d78a205efcc6d55c8cced3a3e327 263 PANTHER PTHR11941:SF82 6 260 7.0E-129 T 23-04-2016 LT40_RS05900 6e97d78a205efcc6d55c8cced3a3e327 263 SUPERFAMILY SSF52096 9 262 8.71E-60 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS05900 6e97d78a205efcc6d55c8cced3a3e327 263 PANTHER PTHR11941 6 260 7.0E-129 T 23-04-2016 LT40_RS05900 6e97d78a205efcc6d55c8cced3a3e327 263 Gene3D G3DSA:3.90.226.10 8 260 2.0E-58 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS05900 6e97d78a205efcc6d55c8cced3a3e327 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 261 2.3E-40 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LT40_RS14855 68cb3e61b1c1516a4a1cb2d1e09765eb 468 Pfam PF00202 Aminotransferase class-III 28 439 7.3E-128 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS14855 68cb3e61b1c1516a4a1cb2d1e09765eb 468 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 442 1.4E-177 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 LT40_RS14855 68cb3e61b1c1516a4a1cb2d1e09765eb 468 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 3 447 50.283 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 LT40_RS14855 68cb3e61b1c1516a4a1cb2d1e09765eb 468 PANTHER PTHR11986:SF8 5 452 4.8E-219 T 23-04-2016 LT40_RS14855 68cb3e61b1c1516a4a1cb2d1e09765eb 468 Gene3D G3DSA:3.40.640.10 66 342 6.8E-94 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS14855 68cb3e61b1c1516a4a1cb2d1e09765eb 468 SUPERFAMILY SSF53383 10 442 9.62E-133 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS14855 68cb3e61b1c1516a4a1cb2d1e09765eb 468 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS14855 68cb3e61b1c1516a4a1cb2d1e09765eb 468 PANTHER PTHR11986 5 452 4.8E-219 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS14855 68cb3e61b1c1516a4a1cb2d1e09765eb 468 Gene3D G3DSA:3.90.1150.10 5 65 8.1E-56 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS14855 68cb3e61b1c1516a4a1cb2d1e09765eb 468 Gene3D G3DSA:3.90.1150.10 344 445 8.1E-56 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS02265 0c0c69d727aa41826754b131187118cc 248 Pfam PF07238 PilZ domain 124 234 2.6E-9 T 23-04-2016 IPR009875 PilZ domain GO:0035438 LT40_RS02265 0c0c69d727aa41826754b131187118cc 248 Gene3D G3DSA:2.40.10.220 125 246 1.3E-41 T 23-04-2016 LT40_RS02265 0c0c69d727aa41826754b131187118cc 248 Pfam PF07317 Flagellar regulator YcgR 17 121 1.0E-16 T 23-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal LT40_RS02265 0c0c69d727aa41826754b131187118cc 248 Gene3D G3DSA:2.30.110.10 14 124 8.2E-39 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 SUPERFAMILY SSF50715 352 563 1.1E-71 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 PANTHER PTHR11451:SF29 279 565 1.1E-226 T 23-04-2016 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 PANTHER PTHR11451:SF29 19 259 1.1E-226 T 23-04-2016 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 SUPERFAMILY SSF52374 40 358 1.08E-98 T 23-04-2016 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 6 564 54.837 T 23-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 41 564 1.3E-233 T 23-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 PRINTS PR00987 Glutamyl-tRNA synthetase signature 222 232 1.7E-6 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 PRINTS PR00987 Glutamyl-tRNA synthetase signature 72 85 1.7E-6 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 PRINTS PR00987 Glutamyl-tRNA synthetase signature 43 55 1.7E-6 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 39 344 5.8E-107 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 Gene3D G3DSA:3.40.50.620 39 108 4.2E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 Gene3D G3DSA:3.40.50.620 224 274 4.2E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 Gene3D G3DSA:3.90.800.10 113 221 4.0E-46 T 23-04-2016 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 Gene3D G3DSA:2.40.240.10 360 471 9.8E-47 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 352 543 8.4E-62 T 23-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 Gene3D G3DSA:2.40.240.10 472 562 1.5E-32 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 Gene3D G3DSA:1.10.1160.10 275 351 1.3E-35 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 PANTHER PTHR11451 279 565 1.1E-226 T 23-04-2016 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 PANTHER PTHR11451 19 259 1.1E-226 T 23-04-2016 LT40_RS01980 03fc9a6a34cbd35be58b05329d5a3ce2 565 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS03930 4e8bb47938a052084c4540c94018dd92 142 SUPERFAMILY SSF52161 1 139 1.44E-60 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 LT40_RS03930 4e8bb47938a052084c4540c94018dd92 142 Gene3D G3DSA:3.90.1180.10 3 141 2.1E-65 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 LT40_RS03930 4e8bb47938a052084c4540c94018dd92 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 3.4E-65 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 LT40_RS03930 4e8bb47938a052084c4540c94018dd92 142 Pfam PF00572 Ribosomal protein L13 15 138 4.3E-58 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LT40_RS03930 4e8bb47938a052084c4540c94018dd92 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 23-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 LT40_RS03930 4e8bb47938a052084c4540c94018dd92 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 29.636 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LT40_RS03930 4e8bb47938a052084c4540c94018dd92 142 PIRSF PIRSF002181 1 142 2.6E-53 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LT40_RS03930 4e8bb47938a052084c4540c94018dd92 142 PANTHER PTHR11545 1 140 6.7E-77 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LT40_RS13790 7b9967b15abdc6df3c828dfe65728c69 395 Pfam PF13393 Histidyl-tRNA synthetase 12 321 8.4E-117 T 23-04-2016 LT40_RS13790 7b9967b15abdc6df3c828dfe65728c69 395 PIRSF PIRSF001549 7 390 6.0E-48 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 LT40_RS13790 7b9967b15abdc6df3c828dfe65728c69 395 SUPERFAMILY SSF55681 7 324 2.09E-60 T 23-04-2016 LT40_RS13790 7b9967b15abdc6df3c828dfe65728c69 395 PANTHER PTHR11476:SF5 10 361 7.7E-73 T 23-04-2016 LT40_RS13790 7b9967b15abdc6df3c828dfe65728c69 395 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 15 324 1.0E-89 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 LT40_RS13790 7b9967b15abdc6df3c828dfe65728c69 395 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 372 36.149 T 23-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 LT40_RS13790 7b9967b15abdc6df3c828dfe65728c69 395 Gene3D G3DSA:3.30.930.10 20 322 3.9E-70 T 23-04-2016 LT40_RS13790 7b9967b15abdc6df3c828dfe65728c69 395 PANTHER PTHR11476 10 361 7.7E-73 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 SUPERFAMILY SSF52540 28 368 7.62E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 Pfam PF08494 DEAD/H associated 604 789 1.2E-49 T 23-04-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 8 819 0.0 T 23-04-2016 IPR026362 DEXH box helicase, DNA ligase-associated LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 Pfam PF00271 Helicase conserved C-terminal domain 257 356 2.8E-10 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 PANTHER PTHR24031 805 819 1.4E-46 T 23-04-2016 LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 PANTHER PTHR24031 246 400 1.4E-46 T 23-04-2016 LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 PANTHER PTHR24031 18 222 1.4E-46 T 23-04-2016 LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 SMART SM00490 274 355 2.9E-5 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 Gene3D G3DSA:3.40.50.300 247 395 1.3E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 PANTHER PTHR24031:SF122 805 819 1.4E-46 T 23-04-2016 LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 PANTHER PTHR24031:SF122 246 400 1.4E-46 T 23-04-2016 LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 PANTHER PTHR24031:SF122 18 222 1.4E-46 T 23-04-2016 LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 Gene3D G3DSA:3.40.50.300 5 202 2.5E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 Pfam PF00270 DEAD/DEAH box helicase 21 199 5.5E-23 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 PIRSF PIRSF037307 3 820 1.8E-143 T 23-04-2016 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 LT40_RS00920 ca55c630aea8281f1991ad1c6b58a113 823 SMART SM00487 15 228 9.9E-19 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS20175 94ddb8f20477ed0689cf5c3c5f1a59d7 66 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 7.2E-20 T 23-04-2016 IPR012451 Protein of unknown function DUF1656 LT40_RS01950 ef9cc3c5f98090f765c1f048a292b3fa 486 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 64 455 2.8E-82 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LT40_RS01950 ef9cc3c5f98090f765c1f048a292b3fa 486 PANTHER PTHR30023 23 479 5.9E-83 T 23-04-2016 LT40_RS01950 ef9cc3c5f98090f765c1f048a292b3fa 486 Gene3D G3DSA:3.40.710.10 238 475 7.9E-64 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS01950 ef9cc3c5f98090f765c1f048a292b3fa 486 SUPERFAMILY SSF56601 40 475 7.34E-91 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS01950 ef9cc3c5f98090f765c1f048a292b3fa 486 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 65 455 2.6E-62 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LT40_RS01950 ef9cc3c5f98090f765c1f048a292b3fa 486 PANTHER PTHR30023:SF0 23 479 5.9E-83 T 23-04-2016 LT40_RS01950 ef9cc3c5f98090f765c1f048a292b3fa 486 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 70 89 3.6E-23 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LT40_RS01950 ef9cc3c5f98090f765c1f048a292b3fa 486 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 355 369 3.6E-23 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LT40_RS01950 ef9cc3c5f98090f765c1f048a292b3fa 486 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 370 384 3.6E-23 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LT40_RS01950 ef9cc3c5f98090f765c1f048a292b3fa 486 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 295 317 3.6E-23 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LT40_RS01950 ef9cc3c5f98090f765c1f048a292b3fa 486 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 432 445 3.6E-23 T 23-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 SMART SM00382 35 235 6.0E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 SMART SM00382 311 502 6.0E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 Gene3D G3DSA:3.40.50.300 274 527 8.1E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 Gene3D G3DSA:3.40.50.300 5 259 3.0E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 Pfam PF00005 ABC transporter 303 453 2.6E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 Pfam PF00005 ABC transporter 27 185 7.0E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 269 1.7E-5 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 504 528 1.4E-4 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 PANTHER PTHR24220:SF574 8 410 1.6E-191 T 23-04-2016 LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 PANTHER PTHR24220 8 410 1.6E-191 T 23-04-2016 LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 SUPERFAMILY SSF52540 6 256 4.28E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 SUPERFAMILY SSF52540 275 524 4.28E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS02130 311558edbd1b2d57f6b78b4eaf285eb4 536 ProSitePatterns PS00211 ABC transporters family signature. 425 439 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 PANTHER PTHR11014 6 382 1.6E-177 T 23-04-2016 LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 379 51.714 T 23-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 Gene3D G3DSA:3.30.70.360 186 287 1.8E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 SUPERFAMILY SSF53187 4 176 3.43E-56 T 23-04-2016 LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 SUPERFAMILY SSF53187 297 378 3.43E-56 T 23-04-2016 LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 Pfam PF07687 Peptidase dimerisation domain 175 282 3.7E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 SUPERFAMILY SSF55031 177 291 1.79E-20 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 Gene3D G3DSA:3.40.630.10 5 185 6.5E-59 T 23-04-2016 LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 Gene3D G3DSA:3.40.630.10 319 378 6.5E-59 T 23-04-2016 LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 Pfam PF01546 Peptidase family M20/M25/M40 73 375 1.5E-32 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 374 3.9E-117 T 23-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 LT40_RS17150 1a1d68b000ce9d274cca089522e20db1 384 PANTHER PTHR11014:SF75 6 382 1.6E-177 T 23-04-2016 LT40_RS13870 e946d086b2534f2aa0867a2de1da4b48 232 Gene3D G3DSA:3.40.50.880 2 228 2.1E-54 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS13870 e946d086b2534f2aa0867a2de1da4b48 232 Pfam PF00117 Glutamine amidotransferase class-I 28 183 4.0E-17 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LT40_RS13870 e946d086b2534f2aa0867a2de1da4b48 232 SUPERFAMILY SSF52317 26 194 4.16E-45 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS13870 e946d086b2534f2aa0867a2de1da4b48 232 PANTHER PTHR11922 10 208 7.2E-49 T 23-04-2016 LT40_RS13870 e946d086b2534f2aa0867a2de1da4b48 232 PANTHER PTHR11922:SF11 10 208 7.2E-49 T 23-04-2016 LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 138 166 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 SMART SM00257 366 409 7.1E-9 T 23-04-2016 IPR018392 LysM domain LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 SMART SM00257 434 477 6.0E-9 T 23-04-2016 IPR018392 LysM domain LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 Pfam PF01464 Transglycosylase SLT domain 130 228 4.4E-25 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 Pfam PF01476 LysM domain 435 476 4.9E-8 T 23-04-2016 IPR018392 LysM domain LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 Pfam PF01476 LysM domain 367 407 1.2E-9 T 23-04-2016 IPR018392 LysM domain LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 Pfam PF06474 MltD lipid attachment motif 1 34 3.1E-9 T 23-04-2016 IPR010511 Lytic murein transglycosylase D , lipid attachment domain LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 SUPERFAMILY SSF53955 118 277 2.7E-42 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 Gene3D G3DSA:3.10.350.10 365 407 5.3E-15 T 23-04-2016 IPR018392 LysM domain LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 Gene3D G3DSA:3.10.350.10 431 477 8.5E-17 T 23-04-2016 IPR018392 LysM domain LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 PANTHER PTHR21666:SF206 367 477 3.6E-147 T 23-04-2016 LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 PANTHER PTHR21666:SF206 73 350 3.6E-147 T 23-04-2016 LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 SUPERFAMILY SSF54106 365 408 4.84E-9 T 23-04-2016 IPR018392 LysM domain LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 PANTHER PTHR21666 367 477 3.6E-147 T 23-04-2016 LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 PANTHER PTHR21666 73 350 3.6E-147 T 23-04-2016 LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 Gene3D G3DSA:1.10.530.10 116 276 4.9E-47 T 23-04-2016 LT40_RS02155 fe8a30dfd65cf85de5396e36830e0ed1 481 SUPERFAMILY SSF54106 433 477 1.14E-10 T 23-04-2016 IPR018392 LysM domain LT40_RS18100 02cd6a105b3a1a7b49ec2982b89f4359 337 PANTHER PTHR33540 24 333 2.9E-138 T 23-04-2016 LT40_RS18100 02cd6a105b3a1a7b49ec2982b89f4359 337 Pfam PF01636 Phosphotransferase enzyme family 36 258 6.7E-34 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase LT40_RS18100 02cd6a105b3a1a7b49ec2982b89f4359 337 SUPERFAMILY SSF56112 19 318 2.45E-56 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS18100 02cd6a105b3a1a7b49ec2982b89f4359 337 Gene3D G3DSA:3.30.200.20 17 104 1.9E-32 T 23-04-2016 LT40_RS18100 02cd6a105b3a1a7b49ec2982b89f4359 337 PANTHER PTHR33540:SF1 24 333 2.9E-138 T 23-04-2016 LT40_RS18100 02cd6a105b3a1a7b49ec2982b89f4359 337 Gene3D G3DSA:3.90.1200.10 105 333 2.1E-69 T 23-04-2016 LT40_RS05735 89e29a9f019b921733cc827a7d334a18 126 PANTHER PTHR35813:SF1 1 125 2.0E-47 T 23-04-2016 LT40_RS05735 89e29a9f019b921733cc827a7d334a18 126 PIRSF PIRSF016789 9 126 1.2E-38 T 23-04-2016 IPR007401 Protein of unknown function DUF454 LT40_RS05735 89e29a9f019b921733cc827a7d334a18 126 PANTHER PTHR35813 1 125 2.0E-47 T 23-04-2016 LT40_RS05735 89e29a9f019b921733cc827a7d334a18 126 Pfam PF04304 Protein of unknown function (DUF454) 10 124 9.2E-43 T 23-04-2016 IPR007401 Protein of unknown function DUF454 LT40_RS02530 f4545fa718358beec4c6148dbcb6125f 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 104 220 3.5E-25 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LT40_RS02530 f4545fa718358beec4c6148dbcb6125f 246 PANTHER PTHR30433:SF3 2 246 1.2E-115 T 23-04-2016 IPR022522 Flagellar motor stator, MotA LT40_RS02530 f4545fa718358beec4c6148dbcb6125f 246 PANTHER PTHR30433 2 246 1.2E-115 T 23-04-2016 LT40_RS03475 e832c7e30893c06490331a144468864d 250 PANTHER PTHR12029 4 180 2.6E-37 T 23-04-2016 LT40_RS03475 e832c7e30893c06490331a144468864d 250 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 238 3.1E-79 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LT40_RS03475 e832c7e30893c06490331a144468864d 250 PIRSF PIRSF004808 1 245 1.1E-76 T 23-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LT40_RS03475 e832c7e30893c06490331a144468864d 250 Gene3D G3DSA:3.40.1280.10 3 160 1.7E-33 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LT40_RS03475 e832c7e30893c06490331a144468864d 250 Pfam PF00588 SpoU rRNA Methylase family 5 155 5.9E-35 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LT40_RS03475 e832c7e30893c06490331a144468864d 250 SUPERFAMILY SSF75217 4 167 5.89E-40 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases LT40_RS15120 7fa93fbf51cbc1d1eee872c9133cd21e 254 PANTHER PTHR18966 33 252 2.4E-27 T 23-04-2016 LT40_RS15120 7fa93fbf51cbc1d1eee872c9133cd21e 254 Gene3D G3DSA:3.40.190.10 110 206 8.0E-19 T 23-04-2016 LT40_RS15120 7fa93fbf51cbc1d1eee872c9133cd21e 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 33 253 3.6E-52 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS15120 7fa93fbf51cbc1d1eee872c9133cd21e 254 PANTHER PTHR18966:SF152 33 252 2.4E-27 T 23-04-2016 LT40_RS15120 7fa93fbf51cbc1d1eee872c9133cd21e 254 SUPERFAMILY SSF53850 12 253 3.65E-53 T 23-04-2016 LT40_RS15120 7fa93fbf51cbc1d1eee872c9133cd21e 254 SMART SM00062 31 254 2.9E-48 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS15120 7fa93fbf51cbc1d1eee872c9133cd21e 254 Gene3D G3DSA:3.40.190.10 215 253 6.3E-30 T 23-04-2016 LT40_RS15120 7fa93fbf51cbc1d1eee872c9133cd21e 254 Gene3D G3DSA:3.40.190.10 32 109 6.3E-30 T 23-04-2016 LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 Gene3D G3DSA:2.40.50.140 130 188 4.6E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 SMART SM00841 131 187 8.4E-20 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 SMART SM01185 67 123 4.5E-13 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 Hamap MF_00141 Elongation factor P [efp]. 1 188 43.527 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 PIRSF PIRSF005901 1 189 2.2E-61 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 SUPERFAMILY SSF50104 1 62 1.6E-16 T 23-04-2016 IPR008991 Translation protein SH3-like domain LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 SUPERFAMILY SSF50249 65 131 9.0E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 PANTHER PTHR30053 1 189 6.5E-61 T 23-04-2016 LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 Gene3D G3DSA:2.40.50.140 65 129 1.8E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 SUPERFAMILY SSF50249 131 187 7.2E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 122 5.3E-12 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 1.8E-20 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 Gene3D G3DSA:2.30.30.30 1 62 1.1E-20 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 LT40_RS01705 a85c7bd44d4655e5342dea5082a88ab7 189 Pfam PF09285 Elongation factor P, C-terminal 131 187 6.9E-17 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 LT40_RS13245 c60ea8f1dec8d8813cde47acfd05248b 461 TIGRFAM TIGR03173 pbuX: xanthine permease 28 443 1.1E-130 T 23-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 LT40_RS13245 c60ea8f1dec8d8813cde47acfd05248b 461 Pfam PF00860 Permease family 24 411 2.5E-93 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS13245 c60ea8f1dec8d8813cde47acfd05248b 461 PANTHER PTHR11119 2 446 8.9E-214 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS13245 c60ea8f1dec8d8813cde47acfd05248b 461 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 359 379 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LT40_RS13245 c60ea8f1dec8d8813cde47acfd05248b 461 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 20 440 2.5E-113 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LT40_RS13245 c60ea8f1dec8d8813cde47acfd05248b 461 PANTHER PTHR11119:SF44 2 446 8.9E-214 T 23-04-2016 LT40_RS00630 1d17f94ed577e79ce6cda2b67666fdeb 153 PANTHER PTHR37805:SF1 1 153 2.1E-81 T 23-04-2016 LT40_RS00630 1d17f94ed577e79ce6cda2b67666fdeb 153 PANTHER PTHR37805 1 153 2.1E-81 T 23-04-2016 LT40_RS00630 1d17f94ed577e79ce6cda2b67666fdeb 153 Pfam PF07308 Protein of unknown function (DUF1456) 86 153 7.7E-25 T 23-04-2016 IPR009921 Domain of unknown function DUF1456 LT40_RS00630 1d17f94ed577e79ce6cda2b67666fdeb 153 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 4.3E-24 T 23-04-2016 IPR009921 Domain of unknown function DUF1456 LT40_RS07365 1edb9562f00c62aac7975b0b4702523c 418 Gene3D G3DSA:1.10.10.10 360 415 2.0E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07365 1edb9562f00c62aac7975b0b4702523c 418 Pfam PF03861 ANTAR domain 360 412 3.5E-16 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 LT40_RS07365 1edb9562f00c62aac7975b0b4702523c 418 Pfam PF08376 Nitrate and nitrite sensing 35 278 3.2E-40 T 23-04-2016 IPR013587 Nitrate/nitrite sensing protein LT40_RS07365 1edb9562f00c62aac7975b0b4702523c 418 SUPERFAMILY SSF52172 338 412 4.62E-14 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS07365 1edb9562f00c62aac7975b0b4702523c 418 SMART SM01012 357 412 2.1E-18 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 LT40_RS01290 dabb20939b259db7420a45e56af8b4a1 363 Gene3D G3DSA:3.60.150.10 9 354 1.4E-153 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS01290 dabb20939b259db7420a45e56af8b4a1 363 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS01290 dabb20939b259db7420a45e56af8b4a1 363 ProSitePatterns PS00789 Chorismate synthase signature 3. 318 334 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS01290 dabb20939b259db7420a45e56af8b4a1 363 SUPERFAMILY SSF103263 4 354 1.96E-145 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS01290 dabb20939b259db7420a45e56af8b4a1 363 PANTHER PTHR21085 2 350 5.6E-208 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS01290 dabb20939b259db7420a45e56af8b4a1 363 PIRSF PIRSF001456 3 359 1.2E-134 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS01290 dabb20939b259db7420a45e56af8b4a1 363 TIGRFAM TIGR00033 aroC: chorismate synthase 10 349 6.7E-136 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS01290 dabb20939b259db7420a45e56af8b4a1 363 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS01290 dabb20939b259db7420a45e56af8b4a1 363 Pfam PF01264 Chorismate synthase 10 344 5.7E-137 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS01290 dabb20939b259db7420a45e56af8b4a1 363 Hamap MF_00300 Chorismate synthase [aroC]. 10 351 36.469 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS07210 a623ec23e0f7e0081bd52ab5eaaaf275 296 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS07210 a623ec23e0f7e0081bd52ab5eaaaf275 296 PANTHER PTHR11079:SF61 21 296 1.8E-88 T 23-04-2016 LT40_RS07210 a623ec23e0f7e0081bd52ab5eaaaf275 296 Pfam PF00849 RNA pseudouridylate synthase 95 241 1.3E-26 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS07210 a623ec23e0f7e0081bd52ab5eaaaf275 296 PANTHER PTHR11079 21 296 1.8E-88 T 23-04-2016 LT40_RS07210 a623ec23e0f7e0081bd52ab5eaaaf275 296 SUPERFAMILY SSF55120 79 292 2.16E-50 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS09975 5a4e9f6caf76ea0b64655a8a00391a18 413 PANTHER PTHR32027 1 407 9.0E-137 T 23-04-2016 LT40_RS09975 5a4e9f6caf76ea0b64655a8a00391a18 413 Pfam PF07969 Amidohydrolase family 41 400 3.3E-41 T 23-04-2016 IPR013108 Amidohydrolase 3 LT40_RS09975 5a4e9f6caf76ea0b64655a8a00391a18 413 Gene3D G3DSA:3.20.20.140 52 359 1.2E-119 T 23-04-2016 LT40_RS09975 5a4e9f6caf76ea0b64655a8a00391a18 413 PANTHER PTHR32027:SF0 1 407 9.0E-137 T 23-04-2016 LT40_RS09975 5a4e9f6caf76ea0b64655a8a00391a18 413 SUPERFAMILY SSF51556 51 371 2.77E-105 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 SUPERFAMILY SSF53623 97 326 3.4E-75 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 SUPERFAMILY SSF63418 10 95 7.46E-21 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 Pfam PF08245 Mur ligase middle domain 106 306 6.0E-54 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 Gene3D G3DSA:3.40.1390.10 7 95 1.3E-24 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 Gene3D G3DSA:3.40.1190.10 98 330 3.6E-80 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 PANTHER PTHR23135 5 482 9.6E-196 T 23-04-2016 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 SUPERFAMILY SSF53244 329 480 1.83E-46 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 Pfam PF01225 Mur ligase family, catalytic domain 18 94 4.5E-12 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 Gene3D G3DSA:3.90.190.20 331 471 1.2E-54 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 479 34.275 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 409 3.9E-22 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 PANTHER PTHR23135:SF4 5 482 9.6E-196 T 23-04-2016 LT40_RS04030 3201c53e65f49a1e7cb776ce8aa2a4f3 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 18 479 7.7E-155 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 LT40_RS09740 ae9096ecc3d5031f2c9c570ebd481820 377 Gene3D G3DSA:3.90.1510.10 42 275 4.0E-92 T 23-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 LT40_RS09740 ae9096ecc3d5031f2c9c570ebd481820 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.1E-146 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LT40_RS09740 ae9096ecc3d5031f2c9c570ebd481820 377 PIRSF PIRSF006078 1 376 1.4E-131 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LT40_RS09740 ae9096ecc3d5031f2c9c570ebd481820 377 SUPERFAMILY SSF110738 1 375 1.11E-131 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LT40_RS09740 ae9096ecc3d5031f2c9c570ebd481820 377 Pfam PF02595 Glycerate kinase family 3 373 1.8E-143 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LT40_RS09740 ae9096ecc3d5031f2c9c570ebd481820 377 PANTHER PTHR21599 1 375 1.4E-148 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LT40_RS09740 ae9096ecc3d5031f2c9c570ebd481820 377 PANTHER PTHR21599:SF0 1 375 1.4E-148 T 23-04-2016 LT40_RS14060 f0f57183a521e721d48b6a6f45eecc81 345 SUPERFAMILY SSF53822 74 321 3.26E-53 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS14060 f0f57183a521e721d48b6a6f45eecc81 345 SMART SM00354 15 85 4.6E-24 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS14060 f0f57183a521e721d48b6a6f45eecc81 345 Gene3D G3DSA:3.40.50.2300 73 183 1.7E-30 T 23-04-2016 LT40_RS14060 f0f57183a521e721d48b6a6f45eecc81 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 62 1.7E-15 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS14060 f0f57183a521e721d48b6a6f45eecc81 345 PANTHER PTHR30146:SF2 15 345 1.6E-104 T 23-04-2016 LT40_RS14060 f0f57183a521e721d48b6a6f45eecc81 345 Gene3D G3DSA:3.40.50.2300 184 344 8.4E-42 T 23-04-2016 LT40_RS14060 f0f57183a521e721d48b6a6f45eecc81 345 SUPERFAMILY SSF47413 15 71 6.19E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS14060 f0f57183a521e721d48b6a6f45eecc81 345 PANTHER PTHR30146 15 345 1.6E-104 T 23-04-2016 LT40_RS14060 f0f57183a521e721d48b6a6f45eecc81 345 Pfam PF13377 Periplasmic binding protein-like domain 182 345 6.6E-33 T 23-04-2016 LT40_RS14060 f0f57183a521e721d48b6a6f45eecc81 345 Gene3D G3DSA:1.10.260.40 14 71 5.7E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 99 119 3.1E-22 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 3.1E-22 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 57 72 3.1E-22 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 78 98 3.1E-22 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 175 197 3.1E-22 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 Pfam PF00355 Rieske [2Fe-2S] domain 43 118 9.4E-18 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 SUPERFAMILY SSF50022 10 151 1.27E-45 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 PANTHER PTHR21266:SF2 279 393 1.7E-72 T 23-04-2016 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 PANTHER PTHR21266:SF2 8 263 1.7E-72 T 23-04-2016 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 Gene3D G3DSA:2.102.10.10 41 160 5.6E-35 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 174 397 1.5E-38 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 SUPERFAMILY SSF55961 156 399 2.59E-49 T 23-04-2016 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 PANTHER PTHR21266 279 393 1.7E-72 T 23-04-2016 LT40_RS07095 e11618b398e47926e456bbcfe4e06ba0 411 PANTHER PTHR21266 8 263 1.7E-72 T 23-04-2016 LT40_RS18700 b51bd906f5b63cbc8e6137b1ee178a23 289 PANTHER PTHR18966 33 267 9.0E-17 T 23-04-2016 LT40_RS18700 b51bd906f5b63cbc8e6137b1ee178a23 289 Gene3D G3DSA:3.40.190.10 142 215 1.2E-15 T 23-04-2016 LT40_RS18700 b51bd906f5b63cbc8e6137b1ee178a23 289 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 266 5.7E-47 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS18700 b51bd906f5b63cbc8e6137b1ee178a23 289 Gene3D G3DSA:3.40.190.10 18 141 4.2E-28 T 23-04-2016 LT40_RS18700 b51bd906f5b63cbc8e6137b1ee178a23 289 SUPERFAMILY SSF53850 12 266 7.25E-47 T 23-04-2016 LT40_RS18700 b51bd906f5b63cbc8e6137b1ee178a23 289 SMART SM00062 37 267 4.1E-37 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS04580 7c932e6ce2c38fc7ca97c4db2af0ee35 270 Pfam PF08668 HDOD domain 23 201 3.0E-46 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD LT40_RS04580 7c932e6ce2c38fc7ca97c4db2af0ee35 270 PANTHER PTHR33525 1 228 4.2E-72 T 23-04-2016 LT40_RS04580 7c932e6ce2c38fc7ca97c4db2af0ee35 270 Gene3D G3DSA:1.10.3150.10 3 254 6.3E-59 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD LT40_RS04580 7c932e6ce2c38fc7ca97c4db2af0ee35 270 SUPERFAMILY SSF109604 9 239 3.45E-56 T 23-04-2016 LT40_RS04580 7c932e6ce2c38fc7ca97c4db2af0ee35 270 PANTHER PTHR33525:SF2 1 228 4.2E-72 T 23-04-2016 LT40_RS02015 6f7ecde1a9d3cc13e4fcaa1e4497289f 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 253 1.9E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02015 6f7ecde1a9d3cc13e4fcaa1e4497289f 264 PANTHER PTHR30193:SF30 3 264 1.1E-102 T 23-04-2016 LT40_RS02015 6f7ecde1a9d3cc13e4fcaa1e4497289f 264 Gene3D G3DSA:1.10.3720.10 9 253 2.0E-56 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02015 6f7ecde1a9d3cc13e4fcaa1e4497289f 264 PANTHER PTHR30193 3 264 1.1E-102 T 23-04-2016 LT40_RS02015 6f7ecde1a9d3cc13e4fcaa1e4497289f 264 SUPERFAMILY SSF161098 8 253 2.62E-58 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 SUPERFAMILY SSF54782 220 309 4.58E-27 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 Gene3D G3DSA:3.40.190.10 4 110 8.1E-48 T 23-04-2016 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 Gene3D G3DSA:3.30.160.40 221 304 5.8E-28 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 Gene3D G3DSA:3.40.190.10 111 199 3.0E-39 T 23-04-2016 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 3.1E-78 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 38.854 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 SUPERFAMILY SSF53850 5 218 2.93E-83 T 23-04-2016 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 227 295 7.8E-21 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 1.6E-50 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 1.6E-50 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 1.6E-50 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 1.6E-50 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 1.6E-50 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 3.1E-111 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 PIRSF PIRSF001438 1 311 1.5E-118 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16775 41db7dd2b610e09901ec6b5b6448ee18 313 PANTHER PTHR11557 3 307 1.4E-157 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS05235 990cbf431527125c8d3396053a07a068 236 SUPERFAMILY SSF161098 17 220 8.63E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05235 990cbf431527125c8d3396053a07a068 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 227 1.8E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05235 990cbf431527125c8d3396053a07a068 236 PANTHER PTHR30450:SF5 1 236 4.8E-139 T 23-04-2016 LT40_RS05235 990cbf431527125c8d3396053a07a068 236 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 7.9E-16 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS05235 990cbf431527125c8d3396053a07a068 236 PANTHER PTHR30450 1 236 4.8E-139 T 23-04-2016 LT40_RS05235 990cbf431527125c8d3396053a07a068 236 Gene3D G3DSA:1.10.3720.10 16 228 2.2E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09715 da88efe7d124ef190dbbbc6e1ec465c3 155 SUPERFAMILY SSF143744 26 149 1.1E-29 T 23-04-2016 LT40_RS09715 da88efe7d124ef190dbbbc6e1ec465c3 155 PANTHER PTHR34309:SF1 33 149 3.6E-20 T 23-04-2016 LT40_RS09715 da88efe7d124ef190dbbbc6e1ec465c3 155 Pfam PF03928 Haem-degrading 33 146 3.3E-25 T 23-04-2016 IPR005624 Haem-degrading LT40_RS09715 da88efe7d124ef190dbbbc6e1ec465c3 155 PANTHER PTHR34309 33 149 3.6E-20 T 23-04-2016 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 PANTHER PTHR24423 335 711 1.3E-175 T 23-04-2016 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 PANTHER PTHR24423 33 300 1.3E-175 T 23-04-2016 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 Gene3D G3DSA:3.30.450.20 164 283 8.0E-23 T 23-04-2016 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 SUPERFAMILY SSF47384 330 405 6.67E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 529 1.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 550 1.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 515 1.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 PRINTS PR00344 Bacterial sensor protein C-terminal signature 556 569 1.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 Pfam PF08448 PAS fold 43 153 3.1E-8 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 SMART SM00086 243 285 0.02 T 23-04-2016 IPR001610 PAC motif LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 SMART SM00086 108 151 7.6 T 23-04-2016 IPR001610 PAC motif LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 SUPERFAMILY SSF55785 33 144 7.68E-8 T 23-04-2016 IPR000014 PAS domain LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 SUPERFAMILY SSF55874 398 572 6.81E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 SUPERFAMILY SSF55785 159 282 1.92E-17 T 23-04-2016 IPR000014 PAS domain LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 Gene3D G3DSA:3.40.50.2300 592 711 1.3E-31 T 23-04-2016 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 Gene3D G3DSA:3.30.450.20 39 163 5.6E-15 T 23-04-2016 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 166 292 5.4E-8 T 23-04-2016 IPR000014 PAS domain LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 Pfam PF08447 PAS fold 199 277 3.0E-15 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 SMART SM00448 594 706 4.1E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 PANTHER PTHR24423:SF438 335 711 1.3E-175 T 23-04-2016 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 PANTHER PTHR24423:SF438 33 300 1.3E-175 T 23-04-2016 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 Pfam PF00072 Response regulator receiver domain 596 706 6.9E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 SMART SM00387 448 572 2.6E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 SUPERFAMILY SSF52172 593 711 9.82E-28 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 Pfam PF00512 His Kinase A (phospho-acceptor) domain 339 406 1.4E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 SMART SM00388 339 407 7.1E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 Gene3D G3DSA:1.10.287.130 333 403 5.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 Gene3D G3DSA:3.30.565.10 407 570 2.1E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS08915 dee8eacb7b0c128a9c3d41828b914846 713 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 449 570 1.1E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS19015 df526db600a408271fbe4866e20751c4 434 Pfam PF03600 Citrate transporter 14 378 4.7E-50 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 LT40_RS19015 df526db600a408271fbe4866e20751c4 434 TIGRFAM TIGR00784 citMHS: citrate transporter 1 432 1.1E-200 T 23-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 LT40_RS19015 df526db600a408271fbe4866e20751c4 434 PANTHER PTHR10283 7 433 1.2E-165 T 23-04-2016 LT40_RS19015 df526db600a408271fbe4866e20751c4 434 PANTHER PTHR10283:SF87 7 433 1.2E-165 T 23-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 LT40_RS17240 57ea02408a5755d47fdb5ae8905faeec 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 187 2.9E-12 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS17240 57ea02408a5755d47fdb5ae8905faeec 220 SUPERFAMILY SSF56784 6 216 8.67E-41 T 23-04-2016 IPR023214 HAD-like domain LT40_RS17240 57ea02408a5755d47fdb5ae8905faeec 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 188 5.9E-12 T 23-04-2016 IPR023214 HAD-like domain LT40_RS17240 57ea02408a5755d47fdb5ae8905faeec 220 PANTHER PTHR18901:SF7 4 220 2.4E-92 T 23-04-2016 LT40_RS17240 57ea02408a5755d47fdb5ae8905faeec 220 Gene3D G3DSA:3.40.50.1000 8 197 1.5E-27 T 23-04-2016 IPR023214 HAD-like domain LT40_RS17240 57ea02408a5755d47fdb5ae8905faeec 220 PANTHER PTHR18901 4 220 2.4E-92 T 23-04-2016 LT40_RS19980 3f6238003280c6650a4b6bd28f0d3e5f 209 PANTHER PTHR30086:SF2 1 207 9.1E-55 T 23-04-2016 LT40_RS19980 3f6238003280c6650a4b6bd28f0d3e5f 209 Pfam PF01810 LysE type translocator 16 206 1.5E-32 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS19980 3f6238003280c6650a4b6bd28f0d3e5f 209 PIRSF PIRSF006324 1 208 2.1E-52 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS19980 3f6238003280c6650a4b6bd28f0d3e5f 209 PANTHER PTHR30086 1 207 9.1E-55 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS04810 7611eaedbdbeeef75a51494f477a4df9 241 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 7 112 8.0E-24 T 23-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 LT40_RS04810 7611eaedbdbeeef75a51494f477a4df9 241 PANTHER PTHR34108 3 241 5.3E-66 T 23-04-2016 LT40_RS04810 7611eaedbdbeeef75a51494f477a4df9 241 PANTHER PTHR34108:SF1 3 241 5.3E-66 T 23-04-2016 LT40_RS04810 7611eaedbdbeeef75a51494f477a4df9 241 SUPERFAMILY SSF63848 135 240 6.93E-30 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 LT40_RS04810 7611eaedbdbeeef75a51494f477a4df9 241 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 241 9.9E-82 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 LT40_RS04810 7611eaedbdbeeef75a51494f477a4df9 241 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 12 241 26.147 T 23-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 LT40_RS04810 7611eaedbdbeeef75a51494f477a4df9 241 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 137 238 5.3E-29 T 23-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 LT40_RS04810 7611eaedbdbeeef75a51494f477a4df9 241 Gene3D G3DSA:2.160.20.70 121 241 1.7E-36 T 23-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 PANTHER PTHR22573 10 452 1.7E-167 T 23-04-2016 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 Gene3D G3DSA:3.40.120.10 6 138 2.5E-37 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 206 219 2.9E-27 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 2.9E-27 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 2.9E-27 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.9E-27 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 SUPERFAMILY SSF53738 260 365 3.06E-32 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 PANTHER PTHR22573:SF18 10 452 1.7E-167 T 23-04-2016 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 SUPERFAMILY SSF55957 370 452 6.8E-19 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 9 137 1.3E-35 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 Gene3D G3DSA:3.30.310.50 372 452 9.9E-18 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 375 451 1.2E-9 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 SUPERFAMILY SSF53738 155 258 1.45E-28 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 Gene3D G3DSA:3.40.120.10 174 251 1.2E-26 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 SUPERFAMILY SSF53738 4 179 7.46E-39 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 255 3.1E-21 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 369 5.9E-25 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS09065 f6f6d7bf69e52d7c54fc91386ba8426d 453 Gene3D G3DSA:3.40.120.10 252 365 2.1E-38 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS17755 2a9c52d5cafeaf458fecb65c6908a7b3 659 Gene3D G3DSA:2.130.10.30 225 240 1.8E-17 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II LT40_RS17755 2a9c52d5cafeaf458fecb65c6908a7b3 659 Gene3D G3DSA:2.130.10.30 282 458 1.8E-17 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II LT40_RS17755 2a9c52d5cafeaf458fecb65c6908a7b3 659 SUPERFAMILY SSF50985 273 470 2.35E-18 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II LT40_RS09305 31505bb76ef83731281b94e24fd9a743 437 PANTHER PTHR30521 49 430 5.8E-144 T 23-04-2016 LT40_RS09305 31505bb76ef83731281b94e24fd9a743 437 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 8 428 9.0E-152 T 23-04-2016 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 KEGG: 00480+1.11.1.- LT40_RS09305 31505bb76ef83731281b94e24fd9a743 437 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 66 415 3.4E-90 T 23-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- LT40_RS09305 31505bb76ef83731281b94e24fd9a743 437 SUPERFAMILY SSF54909 62 421 4.47E-95 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS09305 31505bb76ef83731281b94e24fd9a743 437 PANTHER PTHR30521:SF4 49 430 5.8E-144 T 23-04-2016 LT40_RS09305 31505bb76ef83731281b94e24fd9a743 437 Pfam PF04261 Dyp-type peroxidase family 66 415 1.4E-102 T 23-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- LT40_RS16610 d9ec9dfdce011dead55af7ddc40120c7 182 PANTHER PTHR10245:SF42 1 182 2.1E-99 T 23-04-2016 LT40_RS16610 d9ec9dfdce011dead55af7ddc40120c7 182 SUPERFAMILY SSF47413 3 65 8.16E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS16610 d9ec9dfdce011dead55af7ddc40120c7 182 SUPERFAMILY SSF51182 64 182 1.2E-25 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS16610 d9ec9dfdce011dead55af7ddc40120c7 182 Pfam PF07883 Cupin domain 109 175 3.0E-18 T 23-04-2016 IPR013096 Cupin 2, conserved barrel LT40_RS16610 d9ec9dfdce011dead55af7ddc40120c7 182 PANTHER PTHR10245 1 182 2.1E-99 T 23-04-2016 LT40_RS16610 d9ec9dfdce011dead55af7ddc40120c7 182 Gene3D G3DSA:1.10.260.40 2 66 1.4E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS16610 d9ec9dfdce011dead55af7ddc40120c7 182 Pfam PF01381 Helix-turn-helix 7 58 1.3E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS16610 d9ec9dfdce011dead55af7ddc40120c7 182 Gene3D G3DSA:2.60.120.10 72 180 1.4E-19 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS16610 d9ec9dfdce011dead55af7ddc40120c7 182 SMART SM00530 6 61 4.9E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS11290 9cefb838f8121a0f4bd3dbb2803eb9a3 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.4E-38 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 LT40_RS11290 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.985 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 LT40_RS11290 9cefb838f8121a0f4bd3dbb2803eb9a3 72 SUPERFAMILY SSF50249 1 70 1.44E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS11290 9cefb838f8121a0f4bd3dbb2803eb9a3 72 PANTHER PTHR33370 1 72 9.8E-49 T 23-04-2016 LT40_RS11290 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 1.6E-27 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 LT40_RS11290 9cefb838f8121a0f4bd3dbb2803eb9a3 72 SMART SM00316 4 72 1.7E-6 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS11290 9cefb838f8121a0f4bd3dbb2803eb9a3 72 Gene3D G3DSA:2.40.50.140 1 71 1.0E-38 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS05505 30532e3e0bf5e0dfc4577995a476926c 626 Pfam PF00672 HAMP domain 276 345 4.4E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS05505 30532e3e0bf5e0dfc4577995a476926c 626 SUPERFAMILY SSF58104 317 626 1.31E-74 T 23-04-2016 LT40_RS05505 30532e3e0bf5e0dfc4577995a476926c 626 PANTHER PTHR32089 16 626 8.4E-265 T 23-04-2016 LT40_RS05505 30532e3e0bf5e0dfc4577995a476926c 626 SMART SM00304 295 349 3.0E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS05505 30532e3e0bf5e0dfc4577995a476926c 626 Pfam PF02743 Cache domain 35 256 1.2E-32 T 23-04-2016 IPR033479 Double Cache domain 1 LT40_RS05505 30532e3e0bf5e0dfc4577995a476926c 626 SUPERFAMILY SSF103190 77 182 9.42E-10 T 23-04-2016 IPR029151 Periplasmic sensor domain-like LT40_RS05505 30532e3e0bf5e0dfc4577995a476926c 626 Gene3D G3DSA:3.30.450.20 139 272 1.9E-32 T 23-04-2016 LT40_RS05505 30532e3e0bf5e0dfc4577995a476926c 626 PANTHER PTHR32089:SF39 16 626 8.4E-265 T 23-04-2016 LT40_RS05505 30532e3e0bf5e0dfc4577995a476926c 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 411 624 1.1E-45 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS05505 30532e3e0bf5e0dfc4577995a476926c 626 Gene3D G3DSA:1.10.287.950 378 595 1.1E-54 T 23-04-2016 LT40_RS05505 30532e3e0bf5e0dfc4577995a476926c 626 SMART SM00283 364 625 1.7E-83 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS15700 3d0787e403db0a9e4bff89c37da062eb 95 Pfam PF11191 Protein of unknown function (DUF2782) 21 95 1.2E-22 T 23-04-2016 IPR021357 Protein of unknown function DUF2782 LT40_RS11185 8644cba72ad86c3bc4b427165a4e5208 360 PANTHER PTHR22893:SF14 1 359 3.5E-168 T 23-04-2016 LT40_RS11185 8644cba72ad86c3bc4b427165a4e5208 360 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 336 1.1E-81 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LT40_RS11185 8644cba72ad86c3bc4b427165a4e5208 360 SUPERFAMILY SSF51395 1 359 1.08E-119 T 23-04-2016 LT40_RS11185 8644cba72ad86c3bc4b427165a4e5208 360 Gene3D G3DSA:3.20.20.70 1 356 1.2E-125 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS11185 8644cba72ad86c3bc4b427165a4e5208 360 PANTHER PTHR22893 1 359 3.5E-168 T 23-04-2016 LT40_RS07370 478a7984b1869137eec500d800c2d684 308 SUPERFAMILY SSF51735 3 165 3.76E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07370 478a7984b1869137eec500d800c2d684 308 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 113 5.4E-16 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LT40_RS07370 478a7984b1869137eec500d800c2d684 308 PANTHER PTHR22604 1 308 5.1E-89 T 23-04-2016 LT40_RS07370 478a7984b1869137eec500d800c2d684 308 Gene3D G3DSA:3.40.50.720 3 183 5.4E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07370 478a7984b1869137eec500d800c2d684 308 PANTHER PTHR22604:SF131 1 308 5.1E-89 T 23-04-2016 LT40_RS08220 9ca9252c4855eafde684a8c85af8b43c 681 PANTHER PTHR32552 18 681 4.1E-168 T 23-04-2016 LT40_RS08220 9ca9252c4855eafde684a8c85af8b43c 681 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 664 681 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site LT40_RS08220 9ca9252c4855eafde684a8c85af8b43c 681 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 28 681 3.7E-115 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS08220 9ca9252c4855eafde684a8c85af8b43c 681 Gene3D G3DSA:2.40.170.20 144 681 2.0E-129 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS08220 9ca9252c4855eafde684a8c85af8b43c 681 PANTHER PTHR32552:SF37 18 681 4.1E-168 T 23-04-2016 LT40_RS08220 9ca9252c4855eafde684a8c85af8b43c 681 Pfam PF00593 TonB dependent receptor 439 678 5.8E-35 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS08220 9ca9252c4855eafde684a8c85af8b43c 681 Pfam PF07715 TonB-dependent Receptor Plug Domain 26 128 2.2E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS08220 9ca9252c4855eafde684a8c85af8b43c 681 Gene3D G3DSA:2.170.130.10 6 135 4.2E-36 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS08220 9ca9252c4855eafde684a8c85af8b43c 681 SUPERFAMILY SSF56935 18 681 7.63E-121 T 23-04-2016 LT40_RS07950 06bebc67db28394ca55157a416a17528 451 Pfam PF08448 PAS fold 31 135 4.7E-14 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS07950 06bebc67db28394ca55157a416a17528 451 PANTHER PTHR24422:SF10 7 442 3.2E-154 T 23-04-2016 LT40_RS07950 06bebc67db28394ca55157a416a17528 451 Gene3D G3DSA:3.30.450.20 31 134 4.1E-21 T 23-04-2016 LT40_RS07950 06bebc67db28394ca55157a416a17528 451 Gene3D G3DSA:3.30.450.20 154 251 1.2E-22 T 23-04-2016 LT40_RS07950 06bebc67db28394ca55157a416a17528 451 SUPERFAMILY SSF55785 30 132 3.06E-21 T 23-04-2016 IPR000014 PAS domain LT40_RS07950 06bebc67db28394ca55157a416a17528 451 SMART SM00283 228 446 1.2E-21 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS07950 06bebc67db28394ca55157a416a17528 451 Gene3D G3DSA:1.10.287.950 252 438 1.4E-46 T 23-04-2016 LT40_RS07950 06bebc67db28394ca55157a416a17528 451 SUPERFAMILY SSF58104 234 439 1.83E-55 T 23-04-2016 LT40_RS07950 06bebc67db28394ca55157a416a17528 451 SUPERFAMILY SSF58104 165 193 1.83E-55 T 23-04-2016 LT40_RS07950 06bebc67db28394ca55157a416a17528 451 SMART SM00086 93 135 0.0056 T 23-04-2016 IPR001610 PAC motif LT40_RS07950 06bebc67db28394ca55157a416a17528 451 SMART SM00086 215 257 6.4E-6 T 23-04-2016 IPR001610 PAC motif LT40_RS07950 06bebc67db28394ca55157a416a17528 451 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 260 1.0E-17 T 23-04-2016 IPR000014 PAS domain LT40_RS07950 06bebc67db28394ca55157a416a17528 451 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 26 136 1.1E-12 T 23-04-2016 IPR000014 PAS domain LT40_RS07950 06bebc67db28394ca55157a416a17528 451 Pfam PF08447 PAS fold 166 250 5.5E-14 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS07950 06bebc67db28394ca55157a416a17528 451 PANTHER PTHR24422 7 442 3.2E-154 T 23-04-2016 LT40_RS07950 06bebc67db28394ca55157a416a17528 451 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 287 435 9.4E-40 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR00701 60kDa inner membrane protein signature 88 109 9.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR00701 60kDa inner membrane protein signature 432 455 9.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR00701 60kDa inner membrane protein signature 515 538 9.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR00701 60kDa inner membrane protein signature 2 23 9.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR00701 60kDa inner membrane protein signature 268 283 9.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR00701 60kDa inner membrane protein signature 479 501 9.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR00701 60kDa inner membrane protein signature 179 199 9.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR00701 60kDa inner membrane protein signature 235 253 9.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR00701 60kDa inner membrane protein signature 341 361 9.5E-97 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 551 25.074 T 23-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PANTHER PTHR12428 186 554 6.4E-132 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 Pfam PF14849 YidC periplasmic domain 83 360 1.4E-85 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 370 549 1.1E-72 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PANTHER PTHR12428:SF14 186 554 6.4E-132 T 23-04-2016 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR01900 YidC translocation/secretion protein signature 356 372 6.6E-29 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR01900 YidC translocation/secretion protein signature 485 500 6.6E-29 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 PRINTS PR01900 YidC translocation/secretion protein signature 504 528 6.6E-29 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 Pfam PF02096 60Kd inner membrane protein 371 549 5.2E-62 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LT40_RS16060 36a2751b597a6157688f5f8c21a02f3f 561 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 369 1.7E-110 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal LT40_RS13300 c19f4d4d71db80fdabcfefd1c695315c 317 Hamap MF_01962 Adenine deaminase. 4 316 84.632 T 23-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 LT40_RS13300 c19f4d4d71db80fdabcfefd1c695315c 317 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 8 313 3.7E-110 T 23-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 LT40_RS13300 c19f4d4d71db80fdabcfefd1c695315c 317 Gene3D G3DSA:3.20.20.140 4 314 1.2E-99 T 23-04-2016 LT40_RS13300 c19f4d4d71db80fdabcfefd1c695315c 317 PANTHER PTHR11409:SF41 1 312 5.4E-169 T 23-04-2016 LT40_RS13300 c19f4d4d71db80fdabcfefd1c695315c 317 PANTHER PTHR11409 1 312 5.4E-169 T 23-04-2016 LT40_RS13300 c19f4d4d71db80fdabcfefd1c695315c 317 SUPERFAMILY SSF51556 2 312 1.21E-84 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS13300 c19f4d4d71db80fdabcfefd1c695315c 317 Pfam PF00962 Adenosine/AMP deaminase 8 311 9.6E-71 T 23-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 LT40_RS14310 499e594b6ad4408a0e2d14f373730dda 535 Pfam PF03109 ABC1 family 114 232 7.9E-35 T 23-04-2016 IPR004147 UbiB domain LT40_RS14310 499e594b6ad4408a0e2d14f373730dda 535 SUPERFAMILY SSF56112 96 159 9.01E-49 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS14310 499e594b6ad4408a0e2d14f373730dda 535 SUPERFAMILY SSF56112 194 437 9.01E-49 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS14310 499e594b6ad4408a0e2d14f373730dda 535 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 445 2.5E-174 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 LT40_RS14310 499e594b6ad4408a0e2d14f373730dda 535 Gene3D G3DSA:3.90.1200.10 247 297 1.9E-4 T 23-04-2016 LT40_RS14310 499e594b6ad4408a0e2d14f373730dda 535 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 535 52.263 T 23-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 LT40_RS14310 499e594b6ad4408a0e2d14f373730dda 535 PANTHER PTHR10566 6 444 1.4E-258 T 23-04-2016 LT40_RS14310 499e594b6ad4408a0e2d14f373730dda 535 PANTHER PTHR10566:SF79 6 444 1.4E-258 T 23-04-2016 LT40_RS11890 c8cc5661fcd9e19aec32dcee00a54337 224 Pfam PF02308 MgtC family 11 140 4.0E-37 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LT40_RS11890 c8cc5661fcd9e19aec32dcee00a54337 224 PRINTS PR01837 MgtC/SapB protein signature 67 89 9.9E-44 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LT40_RS11890 c8cc5661fcd9e19aec32dcee00a54337 224 PRINTS PR01837 MgtC/SapB protein signature 33 51 9.9E-44 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LT40_RS11890 c8cc5661fcd9e19aec32dcee00a54337 224 PRINTS PR01837 MgtC/SapB protein signature 94 118 9.9E-44 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LT40_RS11890 c8cc5661fcd9e19aec32dcee00a54337 224 PRINTS PR01837 MgtC/SapB protein signature 14 33 9.9E-44 T 23-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LT40_RS11890 c8cc5661fcd9e19aec32dcee00a54337 224 PANTHER PTHR33778 1 214 1.5E-54 T 23-04-2016 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 Pfam PF00970 Oxidoreductase FAD-binding domain 158 253 2.2E-11 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 186 198 6.8E-8 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 6.8E-8 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 6.8E-8 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 PRINTS PR00410 Phenol hydroxylase reductase family signature 248 257 6.8E-8 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 Gene3D G3DSA:3.40.50.80 257 392 1.3E-28 T 23-04-2016 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 PANTHER PTHR22924 1 395 2.1E-106 T 23-04-2016 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 Gene3D G3DSA:1.10.490.10 2 143 4.7E-49 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 Gene3D G3DSA:2.40.30.10 152 255 2.7E-30 T 23-04-2016 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 Pfam PF00042 Globin 6 103 2.9E-7 T 23-04-2016 IPR000971 Globin GO:0019825|GO:0020037 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 Pfam PF00175 Oxidoreductase NAD-binding domain 264 370 4.3E-10 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 SUPERFAMILY SSF63380 151 253 6.3E-26 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 SUPERFAMILY SSF46458 1 141 3.33E-37 T 23-04-2016 IPR009050 Globin-like LT40_RS08120 3f70c83e815391e5461d8273e81f3d5f 395 SUPERFAMILY SSF52343 257 391 1.3E-31 T 23-04-2016 LT40_RS00520 891083a03ce1c762e5b5d26b5a436554 235 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 235 29.893 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00520 891083a03ce1c762e5b5d26b5a436554 235 PANTHER PTHR32125 9 226 1.7E-75 T 23-04-2016 LT40_RS00520 891083a03ce1c762e5b5d26b5a436554 235 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 10 224 9.3E-70 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00520 891083a03ce1c762e5b5d26b5a436554 235 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 228 1.1E-74 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00520 891083a03ce1c762e5b5d26b5a436554 235 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 107 114 - T 23-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00520 891083a03ce1c762e5b5d26b5a436554 235 Gene3D G3DSA:3.90.550.10 8 230 9.1E-69 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS00520 891083a03ce1c762e5b5d26b5a436554 235 PANTHER PTHR32125:SF4 9 226 1.7E-75 T 23-04-2016 LT40_RS00520 891083a03ce1c762e5b5d26b5a436554 235 SUPERFAMILY SSF53448 8 230 1.01E-56 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS11700 954ebca37809598ff639d775b6d0b50f 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 75 2.7E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11700 954ebca37809598ff639d775b6d0b50f 318 Pfam PF03466 LysR substrate binding domain 102 307 2.7E-39 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS11700 954ebca37809598ff639d775b6d0b50f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 3.9E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11700 954ebca37809598ff639d775b6d0b50f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 3.9E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11700 954ebca37809598ff639d775b6d0b50f 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 3.9E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11700 954ebca37809598ff639d775b6d0b50f 318 SUPERFAMILY SSF46785 14 125 2.72E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11700 954ebca37809598ff639d775b6d0b50f 318 Gene3D G3DSA:3.40.190.10 104 190 1.5E-14 T 23-04-2016 LT40_RS11700 954ebca37809598ff639d775b6d0b50f 318 PANTHER PTHR30126 15 311 4.7E-57 T 23-04-2016 LT40_RS11700 954ebca37809598ff639d775b6d0b50f 318 Gene3D G3DSA:1.10.10.10 16 100 7.0E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11700 954ebca37809598ff639d775b6d0b50f 318 SUPERFAMILY SSF53850 104 312 8.83E-42 T 23-04-2016 LT40_RS11700 954ebca37809598ff639d775b6d0b50f 318 Gene3D G3DSA:3.40.190.10 191 274 6.5E-17 T 23-04-2016 LT40_RS04420 8358676a6bfa0bb19f6375898b7f3f92 208 SUPERFAMILY SSF50475 4 192 9.81E-52 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS04420 8358676a6bfa0bb19f6375898b7f3f92 208 PANTHER PTHR33798 3 207 2.2E-84 T 23-04-2016 LT40_RS04420 8358676a6bfa0bb19f6375898b7f3f92 208 Pfam PF01613 Flavin reductase like domain 27 167 1.7E-17 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LT40_RS04420 8358676a6bfa0bb19f6375898b7f3f92 208 SMART SM00903 25 176 2.7E-12 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LT40_RS04420 8358676a6bfa0bb19f6375898b7f3f92 208 PANTHER PTHR33798:SF4 3 207 2.2E-84 T 23-04-2016 LT40_RS04420 8358676a6bfa0bb19f6375898b7f3f92 208 Gene3D G3DSA:2.30.110.10 14 188 2.8E-66 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS08365 293e5724cd75112307d28b781e5c1c46 231 PANTHER PTHR26402:SF575 1 222 4.1E-105 T 23-04-2016 LT40_RS08365 293e5724cd75112307d28b781e5c1c46 231 Gene3D G3DSA:1.10.10.10 122 220 7.5E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08365 293e5724cd75112307d28b781e5c1c46 231 SMART SM00448 1 111 3.3E-40 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS08365 293e5724cd75112307d28b781e5c1c46 231 SUPERFAMILY SSF52172 1 178 2.11E-39 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS08365 293e5724cd75112307d28b781e5c1c46 231 Gene3D G3DSA:3.40.50.2300 1 121 5.5E-38 T 23-04-2016 LT40_RS08365 293e5724cd75112307d28b781e5c1c46 231 SMART SM00862 144 219 2.5E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS08365 293e5724cd75112307d28b781e5c1c46 231 PANTHER PTHR26402 1 222 4.1E-105 T 23-04-2016 LT40_RS08365 293e5724cd75112307d28b781e5c1c46 231 Pfam PF00072 Response regulator receiver domain 3 111 7.4E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS08365 293e5724cd75112307d28b781e5c1c46 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 1.0E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS08365 293e5724cd75112307d28b781e5c1c46 231 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 218 1.3E-100 T 23-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 LT40_RS03660 044fe37816f6d5ebe470d644dbf35061 303 SMART SM01130 10 301 3.4E-75 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS03660 044fe37816f6d5ebe470d644dbf35061 303 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 4 302 51.213 T 23-04-2016 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501|UniPathway: UPA00564 LT40_RS03660 044fe37816f6d5ebe470d644dbf35061 303 SUPERFAMILY SSF51569 12 301 4.29E-67 T 23-04-2016 LT40_RS03660 044fe37816f6d5ebe470d644dbf35061 303 PANTHER PTHR12128:SF19 1 300 1.2E-118 T 23-04-2016 LT40_RS03660 044fe37816f6d5ebe470d644dbf35061 303 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 3 300 4.9E-131 T 23-04-2016 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501|UniPathway: UPA00564 LT40_RS03660 044fe37816f6d5ebe470d644dbf35061 303 Pfam PF00701 Dihydrodipicolinate synthetase family 12 298 6.7E-52 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS03660 044fe37816f6d5ebe470d644dbf35061 303 PIRSF PIRSF001365 6 303 3.6E-55 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS03660 044fe37816f6d5ebe470d644dbf35061 303 PANTHER PTHR12128 1 300 1.2E-118 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS03660 044fe37816f6d5ebe470d644dbf35061 303 Gene3D G3DSA:3.20.20.70 12 300 1.0E-74 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 PANTHER PTHR30621 67 1008 0.0 T 23-04-2016 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 Gene3D G3DSA:3.30.460.10 159 332 2.4E-63 T 23-04-2016 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 Gene3D G3DSA:3.30.460.10 689 861 5.9E-59 T 23-04-2016 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 75 323 1.3E-89 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 603 856 2.1E-89 T 23-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 72 1008 19.893 T 23-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 SUPERFAMILY SSF81593 334 483 6.98E-43 T 23-04-2016 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 SUPERFAMILY SSF81301 575 865 9.81E-82 T 23-04-2016 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 SUPERFAMILY SSF81301 65 333 2.86E-86 T 23-04-2016 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 Pfam PF08335 GlnD PII-uridylyltransferase 344 483 2.0E-45 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 Pfam PF08335 GlnD PII-uridylyltransferase 878 982 2.5E-13 T 23-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 LT40_RS17665 414e9c961bad41aac0a2e84fe114cc02 1008 SUPERFAMILY SSF81593 866 1004 8.63E-30 T 23-04-2016 LT40_RS05175 072834b4f00537c3bab0ebd3edfb1e65 284 PANTHER PTHR30177 1 277 6.9E-83 T 23-04-2016 LT40_RS05175 072834b4f00537c3bab0ebd3edfb1e65 284 Gene3D G3DSA:3.40.190.10 25 110 4.5E-23 T 23-04-2016 LT40_RS05175 072834b4f00537c3bab0ebd3edfb1e65 284 SUPERFAMILY SSF53850 24 283 5.72E-77 T 23-04-2016 LT40_RS05175 072834b4f00537c3bab0ebd3edfb1e65 284 Gene3D G3DSA:3.40.190.100 111 233 2.2E-35 T 23-04-2016 LT40_RS05175 072834b4f00537c3bab0ebd3edfb1e65 284 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 27 273 4.7E-63 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LT40_RS05175 072834b4f00537c3bab0ebd3edfb1e65 284 PANTHER PTHR30177:SF0 1 277 6.9E-83 T 23-04-2016 LT40_RS09625 572633ffaad444540f71d484a9fd5e30 513 Pfam PF00501 AMP-binding enzyme 35 411 6.6E-69 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LT40_RS09625 572633ffaad444540f71d484a9fd5e30 513 Gene3D G3DSA:3.40.50.980 177 328 8.5E-28 T 23-04-2016 LT40_RS09625 572633ffaad444540f71d484a9fd5e30 513 Gene3D G3DSA:3.40.50.980 32 176 3.0E-29 T 23-04-2016 LT40_RS09625 572633ffaad444540f71d484a9fd5e30 513 Gene3D G3DSA:2.30.38.10 329 404 3.3E-17 T 23-04-2016 LT40_RS09625 572633ffaad444540f71d484a9fd5e30 513 PANTHER PTHR24096 39 501 2.6E-93 T 23-04-2016 LT40_RS09625 572633ffaad444540f71d484a9fd5e30 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 420 493 1.7E-6 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LT40_RS09625 572633ffaad444540f71d484a9fd5e30 513 Gene3D G3DSA:3.30.300.30 408 503 1.8E-18 T 23-04-2016 LT40_RS09625 572633ffaad444540f71d484a9fd5e30 513 SUPERFAMILY SSF56801 18 506 1.7E-114 T 23-04-2016 LT40_RS09625 572633ffaad444540f71d484a9fd5e30 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 23-04-2016 IPR020845 AMP-binding, conserved site LT40_RS16370 1e614ef1a48ecaa98b282cafb6de59eb 277 Gene3D G3DSA:3.40.50.300 30 271 7.5E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16370 1e614ef1a48ecaa98b282cafb6de59eb 277 PANTHER PTHR24220:SF585 32 276 1.9E-138 T 23-04-2016 LT40_RS16370 1e614ef1a48ecaa98b282cafb6de59eb 277 SMART SM00382 55 258 6.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS16370 1e614ef1a48ecaa98b282cafb6de59eb 277 SUPERFAMILY SSF52540 27 264 1.36E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16370 1e614ef1a48ecaa98b282cafb6de59eb 277 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS16370 1e614ef1a48ecaa98b282cafb6de59eb 277 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 31 277 2.1E-124 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 LT40_RS16370 1e614ef1a48ecaa98b282cafb6de59eb 277 PANTHER PTHR24220 32 276 1.9E-138 T 23-04-2016 LT40_RS16370 1e614ef1a48ecaa98b282cafb6de59eb 277 Pfam PF00005 ABC transporter 48 201 6.4E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 Gene3D G3DSA:3.40.50.720 10 244 7.7E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 Pfam PF00106 short chain dehydrogenase 15 210 2.2E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 4.5E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 4.5E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 4.5E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 4.5E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 4.5E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 4.5E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 SUPERFAMILY SSF51735 11 243 3.91E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 PANTHER PTHR24322 166 198 1.7E-78 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 PANTHER PTHR24322 18 150 1.7E-78 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 PANTHER PTHR24322:SF337 166 198 1.7E-78 T 23-04-2016 LT40_RS06115 00c62f95235552a3804f29f8d47dbf8d 246 PANTHER PTHR24322:SF337 18 150 1.7E-78 T 23-04-2016 LT40_RS08425 fac176903c3d3d4cc5a031c7c276ab24 741 Pfam PF13807 G-rich domain on putative tyrosine kinase 409 483 2.7E-15 T 23-04-2016 IPR032807 Tyrosine kinase, G-rich domain LT40_RS08425 fac176903c3d3d4cc5a031c7c276ab24 741 Pfam PF02706 Chain length determinant protein 28 209 8.4E-19 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LT40_RS08425 fac176903c3d3d4cc5a031c7c276ab24 741 Gene3D G3DSA:3.40.50.300 550 729 6.2E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08425 fac176903c3d3d4cc5a031c7c276ab24 741 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 553 724 7.2E-12 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LT40_RS08425 fac176903c3d3d4cc5a031c7c276ab24 741 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 531 722 7.0E-40 T 23-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 LT40_RS08425 fac176903c3d3d4cc5a031c7c276ab24 741 PANTHER PTHR32309 5 738 1.9E-134 T 23-04-2016 LT40_RS08425 fac176903c3d3d4cc5a031c7c276ab24 741 SUPERFAMILY SSF52540 550 735 1.31E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08425 fac176903c3d3d4cc5a031c7c276ab24 741 PANTHER PTHR32309:SF13 5 738 1.9E-134 T 23-04-2016 LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 SUPERFAMILY SSF49493 221 303 2.75E-16 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 Gene3D G3DSA:2.60.260.20 124 214 5.1E-16 T 23-04-2016 LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 23-04-2016 IPR018253 DnaJ domain, conserved site LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 PANTHER PTHR24078:SF190 4 310 2.1E-72 T 23-04-2016 LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 SUPERFAMILY SSF49493 131 228 4.84E-14 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 PANTHER PTHR24078 4 310 2.1E-72 T 23-04-2016 LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 Gene3D G3DSA:1.10.287.110 2 112 2.0E-31 T 23-04-2016 IPR001623 DnaJ domain LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 SUPERFAMILY SSF46565 1 106 1.7E-30 T 23-04-2016 IPR001623 DnaJ domain LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 SMART SM00271 4 61 3.0E-25 T 23-04-2016 IPR001623 DnaJ domain LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 Gene3D G3DSA:2.60.260.20 218 294 8.4E-17 T 23-04-2016 LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 Pfam PF01556 DnaJ C terminal domain 137 294 3.1E-34 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 PRINTS PR00625 DnaJ domain signature 25 40 1.1E-21 T 23-04-2016 IPR001623 DnaJ domain LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 PRINTS PR00625 DnaJ domain signature 61 80 1.1E-21 T 23-04-2016 IPR001623 DnaJ domain LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 PRINTS PR00625 DnaJ domain signature 7 25 1.1E-21 T 23-04-2016 IPR001623 DnaJ domain LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 PRINTS PR00625 DnaJ domain signature 41 61 1.1E-21 T 23-04-2016 IPR001623 DnaJ domain LT40_RS13595 86b70ffbf908e196807f875adbea3a3d 322 Pfam PF00226 DnaJ domain 5 66 1.8E-23 T 23-04-2016 IPR001623 DnaJ domain LT40_RS01965 2abe6f56da2c2e2370996f2dd44a8d3e 510 Pfam PF07690 Major Facilitator Superfamily 19 413 6.9E-51 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS01965 2abe6f56da2c2e2370996f2dd44a8d3e 510 PANTHER PTHR23501 5 501 1.0E-254 T 23-04-2016 LT40_RS01965 2abe6f56da2c2e2370996f2dd44a8d3e 510 SUPERFAMILY SSF103473 10 199 4.32E-64 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS01965 2abe6f56da2c2e2370996f2dd44a8d3e 510 SUPERFAMILY SSF103473 471 494 4.32E-64 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS01965 2abe6f56da2c2e2370996f2dd44a8d3e 510 SUPERFAMILY SSF103473 251 422 4.32E-64 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS01965 2abe6f56da2c2e2370996f2dd44a8d3e 510 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 493 1.7E-151 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LT40_RS01965 2abe6f56da2c2e2370996f2dd44a8d3e 510 Gene3D G3DSA:1.20.1250.20 268 420 8.1E-17 T 23-04-2016 LT40_RS01965 2abe6f56da2c2e2370996f2dd44a8d3e 510 Gene3D G3DSA:1.20.1250.20 462 495 8.1E-17 T 23-04-2016 LT40_RS01965 2abe6f56da2c2e2370996f2dd44a8d3e 510 Gene3D G3DSA:1.20.1250.20 17 186 2.1E-32 T 23-04-2016 LT40_RS01965 2abe6f56da2c2e2370996f2dd44a8d3e 510 PANTHER PTHR23501:SF52 5 501 1.0E-254 T 23-04-2016 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 SMART SM00387 236 356 6.1E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 SMART SM00091 6 74 2.0E-5 T 23-04-2016 IPR000014 PAS domain LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 SMART SM00388 132 197 2.2E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 Gene3D G3DSA:3.30.565.10 199 356 1.5E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 356 5.1E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 Pfam PF00989 PAS fold 9 104 8.9E-6 T 23-04-2016 IPR013767 PAS fold GO:0006355 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 SUPERFAMILY SSF55874 200 354 7.33E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 302 4.4E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 335 4.4E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 353 4.4E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 Gene3D G3DSA:1.10.287.130 128 189 5.9E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 PANTHER PTHR24423:SF488 1 272 2.7E-154 T 23-04-2016 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 PANTHER PTHR24423:SF488 288 358 2.7E-154 T 23-04-2016 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 SUPERFAMILY SSF47384 127 194 3.53E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 Gene3D G3DSA:3.30.450.20 4 109 8.6E-20 T 23-04-2016 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 136 189 1.9E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 PANTHER PTHR24423 1 272 2.7E-154 T 23-04-2016 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 PANTHER PTHR24423 288 358 2.7E-154 T 23-04-2016 LT40_RS14460 f2a51999f03ef6d0cc9f7a9b2a8df6c3 361 SUPERFAMILY SSF55785 4 103 9.6E-9 T 23-04-2016 IPR000014 PAS domain LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 336 46.976 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 PIRSF PIRSF500210 1 336 9.9E-128 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 SUPERFAMILY SSF56655 2 334 8.6E-116 T 23-04-2016 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 Gene3D G3DSA:3.40.190.80 199 335 3.9E-56 T 23-04-2016 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 197 2.2E-61 T 23-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 4.9E-75 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 4.9E-75 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 310 335 4.9E-75 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 4.9E-75 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 4.9E-75 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 4.9E-75 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 PIRSF PIRSF000904 1 336 2.2E-126 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 Gene3D G3DSA:3.30.540.10 4 198 7.7E-76 T 23-04-2016 LT40_RS14415 8e9e9138899049138dc3f6dc92c4aa33 336 PANTHER PTHR11556 4 334 1.1E-152 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 LT40_RS00905 e6807824d3f9de774d841445f8959b9b 188 Pfam PF00692 dUTPase 71 184 3.2E-8 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 LT40_RS00905 e6807824d3f9de774d841445f8959b9b 188 PANTHER PTHR11241 1 187 4.6E-81 T 23-04-2016 LT40_RS00905 e6807824d3f9de774d841445f8959b9b 188 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 187 5.2E-50 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 LT40_RS00905 e6807824d3f9de774d841445f8959b9b 188 PANTHER PTHR11241:SF1 1 187 4.6E-81 T 23-04-2016 LT40_RS00905 e6807824d3f9de774d841445f8959b9b 188 SUPERFAMILY SSF51283 3 187 1.57E-53 T 23-04-2016 IPR029054 dUTPase-like LT40_RS00905 e6807824d3f9de774d841445f8959b9b 188 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 188 28.776 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 LT40_RS00905 e6807824d3f9de774d841445f8959b9b 188 Gene3D G3DSA:2.70.40.10 3 187 1.1E-69 T 23-04-2016 IPR029054 dUTPase-like LT40_RS20810 2a09b4a1efabfa7f9409f925f8b92b64 297 Gene3D G3DSA:3.60.110.10 9 285 6.5E-78 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS20810 2a09b4a1efabfa7f9409f925f8b92b64 297 PANTHER PTHR23088 4 289 2.6E-74 T 23-04-2016 LT40_RS20810 2a09b4a1efabfa7f9409f925f8b92b64 297 Pfam PF00795 Carbon-nitrogen hydrolase 11 265 7.1E-51 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS20810 2a09b4a1efabfa7f9409f925f8b92b64 297 SUPERFAMILY SSF56317 8 285 1.19E-73 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS06375 f322e32f0430a9e6b1abad2e23214694 403 Pfam PF03275 UDP-galactopyranose mutase 167 364 2.2E-84 T 23-04-2016 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LT40_RS06375 f322e32f0430a9e6b1abad2e23214694 403 SUPERFAMILY SSF54373 266 331 1.96E-23 T 23-04-2016 LT40_RS06375 f322e32f0430a9e6b1abad2e23214694 403 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 22 380 5.0E-120 T 23-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LT40_RS06375 f322e32f0430a9e6b1abad2e23214694 403 SUPERFAMILY SSF51971 21 283 3.18E-48 T 23-04-2016 LT40_RS06375 f322e32f0430a9e6b1abad2e23214694 403 SUPERFAMILY SSF51971 349 384 3.18E-48 T 23-04-2016 LT40_RS06375 f322e32f0430a9e6b1abad2e23214694 403 Pfam PF13450 NAD(P)-binding Rossmann-like domain 26 93 3.2E-15 T 23-04-2016 LT40_RS06375 f322e32f0430a9e6b1abad2e23214694 403 Gene3D G3DSA:3.40.50.720 339 381 9.8E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06375 f322e32f0430a9e6b1abad2e23214694 403 Gene3D G3DSA:3.40.50.720 202 275 9.8E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06375 f322e32f0430a9e6b1abad2e23214694 403 Gene3D G3DSA:3.40.50.720 21 100 9.8E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06375 f322e32f0430a9e6b1abad2e23214694 403 PANTHER PTHR21197 18 400 1.4E-106 T 23-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LT40_RS11390 fb7d15c1d3e726d671de898a04ac5405 182 PANTHER PTHR10849 14 182 2.1E-80 T 23-04-2016 LT40_RS11390 fb7d15c1d3e726d671de898a04ac5405 182 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 18 139 5.2E-52 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 LT40_RS11390 fb7d15c1d3e726d671de898a04ac5405 182 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 101 112 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS11390 fb7d15c1d3e726d671de898a04ac5405 182 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS11390 fb7d15c1d3e726d671de898a04ac5405 182 SUPERFAMILY SSF54862 35 162 1.26E-29 T 23-04-2016 LT40_RS11390 fb7d15c1d3e726d671de898a04ac5405 182 Gene3D G3DSA:3.30.70.20 29 119 4.7E-19 T 23-04-2016 LT40_RS11390 fb7d15c1d3e726d671de898a04ac5405 182 Pfam PF12838 4Fe-4S dicluster domain 61 115 2.4E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LT40_RS11390 fb7d15c1d3e726d671de898a04ac5405 182 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 2 152 28.403 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 LT40_RS11390 fb7d15c1d3e726d671de898a04ac5405 182 PANTHER PTHR10849:SF13 14 182 2.1E-80 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 PIRSF PIRSF003101 1 418 2.1E-161 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 SMART SM00842 10 196 1.1E-106 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 Gene3D G3DSA:3.30.1490.110 100 157 3.5E-17 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 PANTHER PTHR32432:SF4 1 418 8.2E-172 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 Gene3D G3DSA:3.30.420.40 5 83 3.9E-25 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 Gene3D G3DSA:3.30.420.40 158 209 3.9E-25 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 Gene3D G3DSA:3.90.640.10 235 297 1.0E-19 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 Gene3D G3DSA:3.30.420.40 298 352 2.7E-36 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 Gene3D G3DSA:3.30.420.40 210 234 2.7E-36 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 31.827 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 SUPERFAMILY SSF53067 198 378 4.31E-51 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 Pfam PF14450 Cell division protein FtsA 207 374 1.2E-25 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 Pfam PF14450 Cell division protein FtsA 11 193 9.0E-11 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 2.0E-32 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 PANTHER PTHR32432 1 418 8.2E-172 T 23-04-2016 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 5.1E-158 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 LT40_RS04075 36640d9103dd7cb38500035bde8ef62b 418 SUPERFAMILY SSF53067 9 197 2.37E-62 T 23-04-2016 LT40_RS15390 ea8c2731bef751821a719628ffc2db9c 426 SUPERFAMILY SSF53383 22 425 1.75E-135 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS15390 ea8c2731bef751821a719628ffc2db9c 426 PANTHER PTHR11986 1 425 7.4E-298 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS15390 ea8c2731bef751821a719628ffc2db9c 426 Pfam PF00202 Aminotransferase class-III 18 421 2.5E-133 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS15390 ea8c2731bef751821a719628ffc2db9c 426 Gene3D G3DSA:3.40.640.10 61 319 4.8E-86 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS15390 ea8c2731bef751821a719628ffc2db9c 426 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 10 422 2.1E-165 T 23-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 LT40_RS15390 ea8c2731bef751821a719628ffc2db9c 426 Gene3D G3DSA:3.90.1150.10 320 424 8.0E-38 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS15390 ea8c2731bef751821a719628ffc2db9c 426 Gene3D G3DSA:3.90.1150.10 4 60 8.0E-38 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS15390 ea8c2731bef751821a719628ffc2db9c 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS15390 ea8c2731bef751821a719628ffc2db9c 426 PANTHER PTHR11986:SF70 1 425 7.4E-298 T 23-04-2016 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 SMART SM00091 98 166 1.1E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 SUPERFAMILY SSF55874 261 426 4.19E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 Gene3D G3DSA:1.10.287.130 196 257 5.4E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 7.1E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 Pfam PF11808 Domain of unknown function (DUF3329) 5 90 2.7E-29 T 23-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 SMART SM00388 205 272 1.7E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 SMART SM00387 317 429 6.8E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 SUPERFAMILY SSF55785 109 204 2.97E-9 T 23-04-2016 IPR000014 PAS domain LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 Gene3D G3DSA:3.30.565.10 258 427 1.1E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 Pfam PF00989 PAS fold 99 175 5.3E-8 T 23-04-2016 IPR013767 PAS fold GO:0006355 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 PANTHER PTHR24423 40 430 1.3E-165 T 23-04-2016 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.4E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 1.4E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 1.4E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 1.4E-10 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 425 1.3E-135 T 23-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 SUPERFAMILY SSF47384 191 272 1.71E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 PANTHER PTHR24423:SF554 40 430 1.3E-165 T 23-04-2016 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 9.1E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS16395 cf7584a4d082b2fff57155f368fe4b04 433 Gene3D G3DSA:3.30.450.20 105 179 1.3E-10 T 23-04-2016 LT40_RS15245 64b95898405ad9f743a8254546953b19 359 PANTHER PTHR11835 1 358 1.9E-218 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LT40_RS15245 64b95898405ad9f743a8254546953b19 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 245 264 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LT40_RS15245 64b95898405ad9f743a8254546953b19 359 Gene3D G3DSA:3.40.718.10 5 349 4.5E-116 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LT40_RS15245 64b95898405ad9f743a8254546953b19 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 355 2.1E-85 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LT40_RS15245 64b95898405ad9f743a8254546953b19 359 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 4 357 2.4E-172 T 23-04-2016 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 LT40_RS15245 64b95898405ad9f743a8254546953b19 359 SUPERFAMILY SSF53659 3 357 3.26E-114 T 23-04-2016 LT40_RS15245 64b95898405ad9f743a8254546953b19 359 SMART SM01329 7 355 1.4E-176 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LT40_RS15245 64b95898405ad9f743a8254546953b19 359 PANTHER PTHR11835:SF37 1 358 1.9E-218 T 23-04-2016 LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 PANTHER PTHR22769:SF35 2 187 1.8E-48 T 23-04-2016 LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 SUPERFAMILY SSF55811 2 125 2.3E-36 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 Gene3D G3DSA:3.90.79.10 3 120 1.9E-36 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 Pfam PF14815 NUDIX domain 8 124 7.3E-18 T 23-04-2016 IPR029119 MutY, C-terminal LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 Gene3D G3DSA:3.20.20.70 121 312 7.5E-37 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 Pfam PF02581 Thiamine monophosphate synthase/TENI 132 309 3.8E-35 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 PANTHER PTHR22769 2 187 1.8E-48 T 23-04-2016 LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 124 2.5E-32 T 23-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.6E-6 T 23-04-2016 IPR020476 NUDIX hydrolase LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.6E-6 T 23-04-2016 IPR020476 NUDIX hydrolase LT40_RS04105 b5618d6e6a275f3ea2b9d6e40c524eb0 314 SUPERFAMILY SSF51391 114 313 2.88E-44 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LT40_RS16025 773dfe6cef79508e4662a8a47884e4b9 445 Gene3D G3DSA:1.20.1250.20 244 425 2.1E-17 T 23-04-2016 LT40_RS16025 773dfe6cef79508e4662a8a47884e4b9 445 Gene3D G3DSA:1.20.1250.20 16 223 1.9E-24 T 23-04-2016 LT40_RS16025 773dfe6cef79508e4662a8a47884e4b9 445 ProSitePatterns PS00216 Sugar transport proteins signature 1. 297 314 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS16025 773dfe6cef79508e4662a8a47884e4b9 445 PANTHER PTHR23508:SF17 9 431 1.7E-139 T 23-04-2016 LT40_RS16025 773dfe6cef79508e4662a8a47884e4b9 445 SUPERFAMILY SSF103473 15 422 4.19E-66 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS16025 773dfe6cef79508e4662a8a47884e4b9 445 PANTHER PTHR23508 9 431 1.7E-139 T 23-04-2016 LT40_RS16025 773dfe6cef79508e4662a8a47884e4b9 445 Pfam PF07690 Major Facilitator Superfamily 22 386 1.2E-28 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS09235 24944299fa3fb357af65b10f6953de7c 296 Pfam PF00535 Glycosyl transferase family 2 15 182 1.1E-24 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS09235 24944299fa3fb357af65b10f6953de7c 296 SUPERFAMILY SSF53448 9 251 1.88E-50 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09235 24944299fa3fb357af65b10f6953de7c 296 Gene3D G3DSA:3.90.550.10 12 239 2.6E-50 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09235 24944299fa3fb357af65b10f6953de7c 296 PANTHER PTHR22916 11 296 9.0E-50 T 23-04-2016 LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 190 5.0E-6 T 23-04-2016 LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PANTHER PTHR24322 159 190 8.7E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PANTHER PTHR24322 10 143 8.7E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.0E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.0E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 3.0E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.0E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.0E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 3.0E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 Gene3D G3DSA:3.40.50.720 2 250 3.5E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PANTHER PTHR24322:SF356 159 190 8.7E-50 T 23-04-2016 LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PANTHER PTHR24322:SF356 10 143 8.7E-50 T 23-04-2016 LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 Pfam PF00106 short chain dehydrogenase 6 202 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10385 30b01fdeb6096f6d6956c6fe516b052c 253 SUPERFAMILY SSF51735 3 248 1.23E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18310 8a0407250dfe3f0d2ca3f59e6adb733b 166 SUPERFAMILY SSF160369 4 160 1.12E-47 T 23-04-2016 LT40_RS18310 8a0407250dfe3f0d2ca3f59e6adb733b 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 23-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18310 8a0407250dfe3f0d2ca3f59e6adb733b 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 27.384 T 23-04-2016 IPR022973 Ribosomal protein L10 LT40_RS18310 8a0407250dfe3f0d2ca3f59e6adb733b 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 59 154 9.0E-6 T 23-04-2016 LT40_RS18310 8a0407250dfe3f0d2ca3f59e6adb733b 166 Pfam PF00466 Ribosomal protein L10 5 101 2.0E-24 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 LT40_RS18310 8a0407250dfe3f0d2ca3f59e6adb733b 166 PANTHER PTHR11560 2 164 8.4E-55 T 23-04-2016 LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 SMART SM00304 184 237 3.1E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 SUPERFAMILY SSF158472 185 235 9.29E-8 T 23-04-2016 LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 5.5E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 5.5E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 5.5E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 Gene3D G3DSA:3.30.565.10 312 455 4.8E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 PANTHER PTHR24423 178 455 9.0E-64 T 23-04-2016 LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 SUPERFAMILY SSF47384 221 304 2.16E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 Pfam PF00672 HAMP domain 165 233 2.0E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 SMART SM00387 350 460 2.3E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 Gene3D G3DSA:1.10.287.130 228 299 9.6E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 SUPERFAMILY SSF55874 294 455 9.82E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02780 17d41a0f15fb42d40838a3f38761ada6 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 457 4.9E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 Gene3D G3DSA:3.40.50.2300 25 225 3.4E-69 T 23-04-2016 LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 PANTHER PTHR30483 1 360 3.1E-153 T 23-04-2016 LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 330 345 1.5E-46 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 89 99 1.5E-46 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 278 291 1.5E-46 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 49 65 1.5E-46 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 255 273 1.5E-46 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 68 86 1.5E-46 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 27 43 1.5E-46 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 Pfam PF13458 Periplasmic binding protein 26 361 1.0E-64 T 23-04-2016 IPR028081 Leucine-binding protein domain LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 SUPERFAMILY SSF53822 25 365 5.59E-97 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS00880 4183ec9a02fd5a106fd57ee481e58da9 371 PANTHER PTHR30483:SF16 1 360 3.1E-153 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS20705 89fffe9c64be003c00513d3a63c6d61c 353 PANTHER PTHR11748:SF1 10 349 2.3E-94 T 23-04-2016 LT40_RS20705 89fffe9c64be003c00513d3a63c6d61c 353 SUPERFAMILY SSF56176 10 175 4.67E-29 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS20705 89fffe9c64be003c00513d3a63c6d61c 353 SUPERFAMILY SSF55103 135 349 7.98E-15 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LT40_RS20705 89fffe9c64be003c00513d3a63c6d61c 353 PANTHER PTHR11748 10 349 2.3E-94 T 23-04-2016 LT40_RS20705 89fffe9c64be003c00513d3a63c6d61c 353 Gene3D G3DSA:1.10.45.10 327 349 2.7E-6 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 LT40_RS20705 89fffe9c64be003c00513d3a63c6d61c 353 Pfam PF01565 FAD binding domain 10 137 6.8E-19 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LT40_RS20705 89fffe9c64be003c00513d3a63c6d61c 353 Gene3D G3DSA:3.30.465.10 54 175 2.6E-24 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS18030 d8bb44dc5f53ffd0c1018b8989c76298 189 PANTHER PTHR30309:SF0 1 189 4.6E-64 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LT40_RS18030 d8bb44dc5f53ffd0c1018b8989c76298 189 PANTHER PTHR30309 1 189 4.6E-64 T 23-04-2016 LT40_RS18030 d8bb44dc5f53ffd0c1018b8989c76298 189 SMART SM01207 7 182 5.0E-74 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LT40_RS18030 d8bb44dc5f53ffd0c1018b8989c76298 189 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 187 2.0E-51 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LT40_RS18030 d8bb44dc5f53ffd0c1018b8989c76298 189 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 189 17.945 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LT40_RS18030 d8bb44dc5f53ffd0c1018b8989c76298 189 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 181 1.7E-49 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 LT40_RS04675 7994984f771acbc8e8297c70888427dd 275 PANTHER PTHR23090 1 275 2.4E-123 T 23-04-2016 LT40_RS04675 7994984f771acbc8e8297c70888427dd 275 Pfam PF02540 NAD synthase 28 272 1.2E-60 T 23-04-2016 IPR022310 NAD/GMP synthase LT40_RS04675 7994984f771acbc8e8297c70888427dd 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 26 272 1.2E-63 T 23-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 LT40_RS04675 7994984f771acbc8e8297c70888427dd 275 Gene3D G3DSA:3.40.50.620 23 272 1.1E-64 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS04675 7994984f771acbc8e8297c70888427dd 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 22 275 31.054 T 23-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 LT40_RS04675 7994984f771acbc8e8297c70888427dd 275 SUPERFAMILY SSF52402 22 273 5.5E-71 T 23-04-2016 LT40_RS04675 7994984f771acbc8e8297c70888427dd 275 PANTHER PTHR23090:SF7 1 275 2.4E-123 T 23-04-2016 LT40_RS18465 478cbc71a9c308e30b739d8344fa480d 129 PIRSF PIRSF002131 1 129 1.1E-53 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LT40_RS18465 478cbc71a9c308e30b739d8344fa480d 129 SUPERFAMILY SSF53137 15 129 2.42E-47 T 23-04-2016 LT40_RS18465 478cbc71a9c308e30b739d8344fa480d 129 PANTHER PTHR11759 11 129 1.1E-71 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LT40_RS18465 478cbc71a9c308e30b739d8344fa480d 129 Gene3D G3DSA:3.30.420.80 9 129 8.2E-54 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LT40_RS18465 478cbc71a9c308e30b739d8344fa480d 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 23-04-2016 IPR018102 Ribosomal S11, conserved site LT40_RS18465 478cbc71a9c308e30b739d8344fa480d 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.1E-55 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18465 478cbc71a9c308e30b739d8344fa480d 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.632 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LT40_RS18465 478cbc71a9c308e30b739d8344fa480d 129 Pfam PF00411 Ribosomal protein S11 19 128 6.9E-51 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 Pfam PF00425 chorismate binding enzyme 410 662 1.0E-89 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 Pfam PF04715 Anthranilate synthase component I, N terminal region 239 364 5.0E-17 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 Gene3D G3DSA:3.60.120.10 217 666 4.8E-134 T 23-04-2016 IPR005801 ADC synthase GO:0009058 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PANTHER PTHR11236:SF18 1 666 2.8E-226 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 186 4.8E-42 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 SUPERFAMILY SSF56322 217 667 9.29E-121 T 23-04-2016 IPR005801 ADC synthase GO:0009058 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 Pfam PF00117 Glutamine amidotransferase class-I 5 185 4.4E-42 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 45 59 6.1E-6 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 76 92 6.1E-6 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PANTHER PTHR11236 1 666 2.8E-226 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 Gene3D G3DSA:3.40.50.880 2 188 5.6E-62 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 323 664 2.4E-101 T 23-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PRINTS PR00097 Anthranilate synthase component II signature 121 133 5.4E-26 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PRINTS PR00097 Anthranilate synthase component II signature 48 57 5.4E-26 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PRINTS PR00097 Anthranilate synthase component II signature 164 177 5.4E-26 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PRINTS PR00097 Anthranilate synthase component II signature 76 87 5.4E-26 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PRINTS PR00097 Anthranilate synthase component II signature 3 17 5.4E-26 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 1.4E-12 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 1.4E-12 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.4E-12 T 23-04-2016 LT40_RS00240 4d393b82ce4602ac7433ab96f92f9b25 674 SUPERFAMILY SSF52317 2 191 1.63E-52 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS00430 98305588be4acb863a621301ac2eba8a 251 Gene3D G3DSA:3.40.1180.10 9 246 2.4E-99 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LT40_RS00430 98305588be4acb863a621301ac2eba8a 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 2.3E-77 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LT40_RS00430 98305588be4acb863a621301ac2eba8a 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 39.013 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LT40_RS00430 98305588be4acb863a621301ac2eba8a 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 5.0E-89 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LT40_RS00430 98305588be4acb863a621301ac2eba8a 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 23-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 LT40_RS00430 98305588be4acb863a621301ac2eba8a 251 PANTHER PTHR10291 12 251 3.3E-118 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LT40_RS00430 98305588be4acb863a621301ac2eba8a 251 SUPERFAMILY SSF64005 11 235 1.09E-84 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 LT40_RS06860 fa9aed14d5367eab2c0d895ade1d3cdf 122 PANTHER PTHR30204 1 121 1.1E-22 T 23-04-2016 LT40_RS06860 fa9aed14d5367eab2c0d895ade1d3cdf 122 SUPERFAMILY SSF46955 4 114 1.25E-25 T 23-04-2016 IPR009061 Putative DNA-binding domain LT40_RS06860 fa9aed14d5367eab2c0d895ade1d3cdf 122 Gene3D G3DSA:1.10.1660.10 58 118 4.0E-16 T 23-04-2016 LT40_RS06860 fa9aed14d5367eab2c0d895ade1d3cdf 122 Gene3D G3DSA:1.10.1660.10 3 57 1.8E-21 T 23-04-2016 LT40_RS06860 fa9aed14d5367eab2c0d895ade1d3cdf 122 Pfam PF13411 MerR HTH family regulatory protein 5 70 2.8E-17 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS06860 fa9aed14d5367eab2c0d895ade1d3cdf 122 SMART SM00422 5 72 4.4E-20 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS06860 fa9aed14d5367eab2c0d895ade1d3cdf 122 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS18800 8a8a249c6a56c2a6856504819c1b9c68 155 PANTHER PTHR33603 1 155 3.0E-66 T 23-04-2016 LT40_RS18800 8a8a249c6a56c2a6856504819c1b9c68 155 PANTHER PTHR33603:SF1 1 155 3.0E-66 T 23-04-2016 LT40_RS18800 8a8a249c6a56c2a6856504819c1b9c68 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 28.176 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS18800 8a8a249c6a56c2a6856504819c1b9c68 155 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 3.5E-47 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS18800 8a8a249c6a56c2a6856504819c1b9c68 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 3.1E-62 T 23-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS18800 8a8a249c6a56c2a6856504819c1b9c68 155 SUPERFAMILY SSF75217 1 154 1.15E-48 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases LT40_RS18800 8a8a249c6a56c2a6856504819c1b9c68 155 PIRSF PIRSF004505 1 155 2.5E-42 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS18800 8a8a249c6a56c2a6856504819c1b9c68 155 Gene3D G3DSA:3.40.1280.10 1 155 4.3E-52 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 7.9E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 7.9E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 7.9E-18 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 8.4E-19 T 23-04-2016 LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 SUPERFAMILY SSF54909 69 155 1.61E-17 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 Gene3D G3DSA:1.10.10.10 8 58 2.9E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 SUPERFAMILY SSF46785 6 64 2.77E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 PANTHER PTHR30154:SF0 1 145 9.1E-47 T 23-04-2016 LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 PANTHER PTHR30154 1 145 9.1E-47 T 23-04-2016 LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 Gene3D G3DSA:3.30.70.920 60 155 1.6E-19 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 SMART SM00344 7 116 1.8E-42 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LT40_RS15200 e939eab50fcb03eb9cf2534910b7a807 163 Pfam PF01037 Lrp/AsnC ligand binding domain 74 146 1.6E-18 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS07255 d0263744b1afbdb52ebfdbd713847641 643 Pfam PF01464 Transglycosylase SLT domain 486 596 4.4E-30 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 LT40_RS07255 d0263744b1afbdb52ebfdbd713847641 643 SUPERFAMILY SSF53955 478 637 4.69E-47 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS07255 d0263744b1afbdb52ebfdbd713847641 643 Gene3D G3DSA:1.10.1240.20 404 471 1.4E-19 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 LT40_RS07255 d0263744b1afbdb52ebfdbd713847641 643 Pfam PF14718 Soluble lytic murein transglycosylase L domain 405 471 1.8E-19 T 23-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 LT40_RS07255 d0263744b1afbdb52ebfdbd713847641 643 PANTHER PTHR21666 462 640 3.9E-49 T 23-04-2016 LT40_RS07255 d0263744b1afbdb52ebfdbd713847641 643 SUPERFAMILY SSF48435 26 476 2.88E-127 T 23-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 LT40_RS07255 d0263744b1afbdb52ebfdbd713847641 643 Gene3D G3DSA:1.10.530.10 474 634 2.2E-50 T 23-04-2016 LT40_RS07255 d0263744b1afbdb52ebfdbd713847641 643 Gene3D G3DSA:1.25.20.10 26 385 4.5E-105 T 23-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 SUPERFAMILY SSF52172 649 767 6.4E-42 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 Pfam PF00072 Response regulator receiver domain 652 763 7.0E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 SMART SM00387 402 513 2.1E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 6.4E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 6.4E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 510 6.4E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 6.4E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 Gene3D G3DSA:3.30.565.10 357 514 1.5E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 Gene3D G3DSA:3.40.50.2300 643 767 3.9E-48 T 23-04-2016 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 SUPERFAMILY SSF55874 345 518 1.17E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 Pfam PF00512 His Kinase A (phospho-acceptor) domain 292 356 5.5E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 SMART SM00388 291 356 1.8E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 511 8.0E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 SMART SM00448 650 763 1.0E-40 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 PANTHER PTHR24423 270 516 3.2E-146 T 23-04-2016 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 PANTHER PTHR24423 608 769 3.2E-146 T 23-04-2016 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 SUPERFAMILY SSF47384 276 357 4.71E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 PANTHER PTHR24423:SF382 270 516 3.2E-146 T 23-04-2016 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 PANTHER PTHR24423:SF382 608 769 3.2E-146 T 23-04-2016 LT40_RS05045 7c17fa6da928c79da1475b0b9da05564 769 Gene3D G3DSA:1.10.287.130 287 352 4.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 Pfam PF14579 Helix-hairpin-helix motif 812 895 2.7E-24 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 SUPERFAMILY SSF160975 835 881 2.62E-7 T 23-04-2016 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 Pfam PF01336 OB-fold nucleic acid binding domain 1009 1083 4.6E-9 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 Gene3D G3DSA:2.40.50.140 992 1090 6.3E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 PANTHER PTHR32294:SF0 910 1173 0.0 T 23-04-2016 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 PANTHER PTHR32294:SF0 1 894 0.0 T 23-04-2016 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 SUPERFAMILY SSF89550 5 262 5.3E-15 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1045 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 Gene3D G3DSA:3.20.20.140 5 256 3.5E-25 T 23-04-2016 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 290 737 6.8E-175 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 PANTHER PTHR32294 910 1173 0.0 T 23-04-2016 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 PANTHER PTHR32294 1 894 0.0 T 23-04-2016 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 Pfam PF02811 PHP domain 7 171 1.4E-40 T 23-04-2016 IPR004013 PHP domain GO:0003824 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 SMART SM00481 6 73 7.5E-26 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LT40_RS00485 9f89cfa3a83db4b9f9c5748c5d9ebd70 1173 Gene3D G3DSA:1.10.150.280 837 874 3.7E-8 T 23-04-2016 LT40_RS06450 58742b2fbf7a4ca636e93a56d7cc3a42 255 PANTHER PTHR38834 10 250 8.0E-17 T 23-04-2016 LT40_RS06450 58742b2fbf7a4ca636e93a56d7cc3a42 255 Gene3D G3DSA:3.40.190.10 39 115 4.8E-7 T 23-04-2016 LT40_RS06450 58742b2fbf7a4ca636e93a56d7cc3a42 255 Gene3D G3DSA:3.40.190.10 208 251 4.8E-7 T 23-04-2016 LT40_RS06450 58742b2fbf7a4ca636e93a56d7cc3a42 255 SUPERFAMILY SSF53850 41 253 1.52E-24 T 23-04-2016 LT40_RS06450 58742b2fbf7a4ca636e93a56d7cc3a42 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 252 5.6E-15 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS13240 52db019ee5d60ec2178471bf738f62c9 305 Gene3D G3DSA:3.40.190.10 102 204 7.2E-15 T 23-04-2016 LT40_RS13240 52db019ee5d60ec2178471bf738f62c9 305 PANTHER PTHR30126 14 305 1.2E-77 T 23-04-2016 LT40_RS13240 52db019ee5d60ec2178471bf738f62c9 305 SUPERFAMILY SSF53850 102 304 8.32E-26 T 23-04-2016 LT40_RS13240 52db019ee5d60ec2178471bf738f62c9 305 SUPERFAMILY SSF46785 15 99 1.17E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13240 52db019ee5d60ec2178471bf738f62c9 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 75 1.7E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS13240 52db019ee5d60ec2178471bf738f62c9 305 Pfam PF03466 LysR substrate binding domain 100 302 9.5E-25 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS13240 52db019ee5d60ec2178471bf738f62c9 305 Gene3D G3DSA:1.10.10.10 14 95 2.6E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13240 52db019ee5d60ec2178471bf738f62c9 305 PANTHER PTHR30126:SF16 14 305 1.2E-77 T 23-04-2016 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 7.1E-26 T 23-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 346 353 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 PRINTS PR00481 Cytosol aminopeptidase signature 283 304 1.4E-52 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 PRINTS PR00481 Cytosol aminopeptidase signature 342 362 1.4E-52 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 PRINTS PR00481 Cytosol aminopeptidase signature 320 341 1.4E-52 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 PRINTS PR00481 Cytosol aminopeptidase signature 261 278 1.4E-52 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 PRINTS PR00481 Cytosol aminopeptidase signature 370 385 1.4E-52 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 495 39.958 T 23-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 PANTHER PTHR11963:SF13 7 495 9.7E-220 T 23-04-2016 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 SUPERFAMILY SSF53187 177 493 1.35E-126 T 23-04-2016 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 PANTHER PTHR11963 7 495 9.7E-220 T 23-04-2016 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 Gene3D G3DSA:3.40.630.10 169 493 9.0E-142 T 23-04-2016 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 Gene3D G3DSA:3.40.220.10 1 159 5.7E-50 T 23-04-2016 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 184 486 3.4E-123 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 LT40_RS03135 b79af59d58d1ce6e1258a9b8e0482645 496 SUPERFAMILY SSF52949 1 182 6.47E-41 T 23-04-2016 LT40_RS11715 29364b06d8aa2ad59d64c207229cb518 477 ProSitePatterns PS00216 Sugar transport proteins signature 1. 301 317 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS11715 29364b06d8aa2ad59d64c207229cb518 477 Gene3D G3DSA:1.20.1250.20 22 225 7.1E-24 T 23-04-2016 LT40_RS11715 29364b06d8aa2ad59d64c207229cb518 477 Gene3D G3DSA:1.20.1250.20 251 428 9.8E-16 T 23-04-2016 LT40_RS11715 29364b06d8aa2ad59d64c207229cb518 477 PANTHER PTHR23508:SF19 1 452 1.2E-240 T 23-04-2016 LT40_RS11715 29364b06d8aa2ad59d64c207229cb518 477 PANTHER PTHR23508 1 452 1.2E-240 T 23-04-2016 LT40_RS11715 29364b06d8aa2ad59d64c207229cb518 477 Pfam PF07690 Major Facilitator Superfamily 23 389 1.6E-27 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS11715 29364b06d8aa2ad59d64c207229cb518 477 SUPERFAMILY SSF103473 8 436 3.4E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS08480 65ebb74a57370f922562ea419df90cb7 346 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 4.0E-5 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS08480 65ebb74a57370f922562ea419df90cb7 346 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 330 345 4.0E-5 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS08480 65ebb74a57370f922562ea419df90cb7 346 Gene3D G3DSA:2.40.50.100 211 244 1.1E-23 T 23-04-2016 LT40_RS08480 65ebb74a57370f922562ea419df90cb7 346 Gene3D G3DSA:2.40.50.100 47 80 1.1E-23 T 23-04-2016 LT40_RS08480 65ebb74a57370f922562ea419df90cb7 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 290 4.8E-17 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LT40_RS08480 65ebb74a57370f922562ea419df90cb7 346 SUPERFAMILY SSF111369 47 111 2.09E-10 T 23-04-2016 LT40_RS08480 65ebb74a57370f922562ea419df90cb7 346 PANTHER PTHR30386:SF7 6 342 5.5E-104 T 23-04-2016 LT40_RS08480 65ebb74a57370f922562ea419df90cb7 346 PANTHER PTHR30386 6 342 5.5E-104 T 23-04-2016 LT40_RS08480 65ebb74a57370f922562ea419df90cb7 346 SUPERFAMILY SSF111369 183 299 5.23E-14 T 23-04-2016 LT40_RS18055 d01694bebb82680bfcdb0f607c00cc55 424 SUPERFAMILY SSF53300 252 350 1.0E-4 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS18055 d01694bebb82680bfcdb0f607c00cc55 424 PANTHER PTHR30510 1 421 3.3E-172 T 23-04-2016 LT40_RS18055 d01694bebb82680bfcdb0f607c00cc55 424 Pfam PF04285 Protein of unknown function (DUF444) 4 420 1.8E-176 T 23-04-2016 IPR006698 Uncharacterised protein family UPF0229 LT40_RS18055 d01694bebb82680bfcdb0f607c00cc55 424 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 40.388 T 23-04-2016 IPR006698 Uncharacterised protein family UPF0229 LT40_RS02590 5e1774a40ed67b939696caf710651dfd 58 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 1.6E-15 T 23-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 LT40_RS02590 5e1774a40ed67b939696caf710651dfd 58 PANTHER PTHR37531 1 57 5.5E-20 T 23-04-2016 LT40_RS02590 5e1774a40ed67b939696caf710651dfd 58 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 55 9.1E-19 T 23-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 LT40_RS02590 5e1774a40ed67b939696caf710651dfd 58 PANTHER PTHR37531:SF1 1 57 5.5E-20 T 23-04-2016 LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 SMART SM00490 458 544 1.5E-16 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 Pfam PF00271 Helicase conserved C-terminal domain 432 543 2.1E-17 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 Pfam PF12344 Ultra-violet resistance protein B 550 591 1.8E-21 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 Gene3D G3DSA:3.40.50.300 417 578 8.5E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 Pfam PF04851 Type III restriction enzyme, res subunit 11 131 5.3E-9 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 665 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 SUPERFAMILY SSF52540 36 81 8.77E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 Pfam PF02151 UvrB/uvrC motif 633 666 7.9E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 Gene3D G3DSA:3.30.2060.10 159 230 4.3E-9 T 23-04-2016 LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 SUPERFAMILY SSF46600 626 669 9.55E-11 T 23-04-2016 IPR001943 UVR domain GO:0005515 LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 SUPERFAMILY SSF52540 457 581 8.77E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 Gene3D G3DSA:4.10.860.10 627 669 8.4E-17 T 23-04-2016 IPR001943 UVR domain GO:0005515 LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 SMART SM00487 8 424 4.3E-29 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 SUPERFAMILY SSF52540 3 413 6.77E-137 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 PANTHER PTHR24029 1 671 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 667 43.366 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 Gene3D G3DSA:3.40.50.300 387 408 3.6E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 Gene3D G3DSA:3.40.50.300 277 337 3.6E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05270 aea57cd6f44ce73d7cc925f6647a4aca 671 Gene3D G3DSA:3.40.50.300 5 88 3.6E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00865 f9541a951076a7239676760a4e67c49a 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS00865 f9541a951076a7239676760a4e67c49a 255 PANTHER PTHR24220:SF358 7 105 6.4E-126 T 23-04-2016 LT40_RS00865 f9541a951076a7239676760a4e67c49a 255 PANTHER PTHR24220:SF358 121 254 6.4E-126 T 23-04-2016 LT40_RS00865 f9541a951076a7239676760a4e67c49a 255 SUPERFAMILY SSF52540 4 253 2.28E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00865 f9541a951076a7239676760a4e67c49a 255 PANTHER PTHR24220 7 105 6.4E-126 T 23-04-2016 LT40_RS00865 f9541a951076a7239676760a4e67c49a 255 PANTHER PTHR24220 121 254 6.4E-126 T 23-04-2016 LT40_RS00865 f9541a951076a7239676760a4e67c49a 255 Gene3D G3DSA:3.40.50.300 2 251 4.9E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00865 f9541a951076a7239676760a4e67c49a 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 1.6E-10 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LT40_RS00865 f9541a951076a7239676760a4e67c49a 255 SMART SM00382 30 231 6.0E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS00865 f9541a951076a7239676760a4e67c49a 255 Pfam PF00005 ABC transporter 22 181 1.0E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS00975 df531ded7db03226f51f92baca94a245 306 Pfam PF01039 Carboxyl transferase domain 99 242 3.5E-17 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00975 df531ded7db03226f51f92baca94a245 306 PANTHER PTHR22855:SF17 3 287 2.3E-163 T 23-04-2016 LT40_RS00975 df531ded7db03226f51f92baca94a245 306 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 15 283 8.7E-130 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00975 df531ded7db03226f51f92baca94a245 306 Gene3D G3DSA:3.90.226.10 20 281 1.0E-70 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS00975 df531ded7db03226f51f92baca94a245 306 PANTHER PTHR22855 3 287 2.3E-163 T 23-04-2016 LT40_RS00975 df531ded7db03226f51f92baca94a245 306 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 2 283 37.817 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00975 df531ded7db03226f51f92baca94a245 306 SUPERFAMILY SSF52096 27 284 4.97E-86 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS00975 df531ded7db03226f51f92baca94a245 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 1.0E-37 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00975 df531ded7db03226f51f92baca94a245 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 1.0E-37 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00975 df531ded7db03226f51f92baca94a245 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 1.0E-37 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00975 df531ded7db03226f51f92baca94a245 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 1.0E-37 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00975 df531ded7db03226f51f92baca94a245 306 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 1.0E-37 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS19245 5795380cd99dfbb6c45645f37e1c1432 430 PANTHER PTHR11119:SF9 1 418 2.3E-173 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 LT40_RS19245 5795380cd99dfbb6c45645f37e1c1432 430 PANTHER PTHR11119 1 418 2.3E-173 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS19245 5795380cd99dfbb6c45645f37e1c1432 430 Pfam PF00860 Permease family 17 391 1.0E-55 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS19245 5795380cd99dfbb6c45645f37e1c1432 430 PIRSF PIRSF005353 1 429 6.4E-179 T 23-04-2016 IPR026033 Purine permease PbuG-like LT40_RS20760 4c4f2836d6a0572898687fa581428be6 211 Pfam PF06197 Protein of unknown function (DUF998) 14 200 1.3E-23 T 23-04-2016 IPR009339 Protein of unknown function DUF998 LT40_RS07845 3f819b44fb3314da7677a295a7d75ea6 216 Gene3D G3DSA:3.30.450.40 139 201 1.3E-10 T 23-04-2016 IPR029016 GAF domain-like LT40_RS07845 3f819b44fb3314da7677a295a7d75ea6 216 Gene3D G3DSA:3.30.450.40 58 124 5.7E-14 T 23-04-2016 IPR029016 GAF domain-like LT40_RS07845 3f819b44fb3314da7677a295a7d75ea6 216 PANTHER PTHR30136:SF14 3 210 3.0E-32 T 23-04-2016 LT40_RS07845 3f819b44fb3314da7677a295a7d75ea6 216 SUPERFAMILY SSF55781 53 200 1.9E-21 T 23-04-2016 IPR029016 GAF domain-like LT40_RS07845 3f819b44fb3314da7677a295a7d75ea6 216 SUPERFAMILY SSF46785 4 58 2.3E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07845 3f819b44fb3314da7677a295a7d75ea6 216 Pfam PF01614 Bacterial transcriptional regulator 147 195 3.9E-6 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal LT40_RS07845 3f819b44fb3314da7677a295a7d75ea6 216 PANTHER PTHR30136 3 210 3.0E-32 T 23-04-2016 LT40_RS07845 3f819b44fb3314da7677a295a7d75ea6 216 SMART SM00346 1 75 0.0036 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS07845 3f819b44fb3314da7677a295a7d75ea6 216 Pfam PF09339 IclR helix-turn-helix domain 3 37 2.6E-6 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS07845 3f819b44fb3314da7677a295a7d75ea6 216 Gene3D G3DSA:1.10.10.10 3 45 1.9E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03505 9666116f7c357a07548cb7516245c43c 173 Pfam PF07743 HSCB C-terminal oligomerisation domain 90 164 1.8E-16 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 LT40_RS03505 9666116f7c357a07548cb7516245c43c 173 Pfam PF00226 DnaJ domain 19 73 9.9E-8 T 23-04-2016 IPR001623 DnaJ domain LT40_RS03505 9666116f7c357a07548cb7516245c43c 173 SMART SM00271 4 69 2.5E-10 T 23-04-2016 IPR001623 DnaJ domain LT40_RS03505 9666116f7c357a07548cb7516245c43c 173 PANTHER PTHR14021:SF15 6 173 1.5E-45 T 23-04-2016 LT40_RS03505 9666116f7c357a07548cb7516245c43c 173 Gene3D G3DSA:1.20.1280.20 84 173 6.5E-27 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 LT40_RS03505 9666116f7c357a07548cb7516245c43c 173 SUPERFAMILY SSF47144 82 173 1.44E-23 T 23-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 LT40_RS03505 9666116f7c357a07548cb7516245c43c 173 Gene3D G3DSA:1.10.287.110 6 76 1.5E-23 T 23-04-2016 IPR001623 DnaJ domain LT40_RS03505 9666116f7c357a07548cb7516245c43c 173 PANTHER PTHR14021 6 173 1.5E-45 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 LT40_RS03505 9666116f7c357a07548cb7516245c43c 173 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 4 172 21.832 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 LT40_RS03505 9666116f7c357a07548cb7516245c43c 173 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 16 171 2.9E-31 T 23-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 LT40_RS03505 9666116f7c357a07548cb7516245c43c 173 SUPERFAMILY SSF46565 6 76 3.66E-17 T 23-04-2016 IPR001623 DnaJ domain LT40_RS08390 de185d30588dbb7d6507bd32b0dc1dfc 321 Pfam PF01965 DJ-1/PfpI family 8 175 5.5E-20 T 23-04-2016 IPR002818 DJ-1/PfpI LT40_RS08390 de185d30588dbb7d6507bd32b0dc1dfc 321 PANTHER PTHR11019 8 321 1.5E-105 T 23-04-2016 LT40_RS08390 de185d30588dbb7d6507bd32b0dc1dfc 321 PANTHER PTHR11019:SF68 8 321 1.5E-105 T 23-04-2016 LT40_RS08390 de185d30588dbb7d6507bd32b0dc1dfc 321 Gene3D G3DSA:1.10.10.60 221 268 1.4E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08390 de185d30588dbb7d6507bd32b0dc1dfc 321 Pfam PF12833 Helix-turn-helix domain 236 315 3.9E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS08390 de185d30588dbb7d6507bd32b0dc1dfc 321 SUPERFAMILY SSF46689 216 264 2.37E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08390 de185d30588dbb7d6507bd32b0dc1dfc 321 Gene3D G3DSA:1.10.10.60 269 315 3.8E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08390 de185d30588dbb7d6507bd32b0dc1dfc 321 SMART SM00342 230 313 2.1E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS08390 de185d30588dbb7d6507bd32b0dc1dfc 321 Gene3D G3DSA:3.40.50.880 8 220 1.0E-51 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS08390 de185d30588dbb7d6507bd32b0dc1dfc 321 SUPERFAMILY SSF52317 8 196 1.03E-48 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS08390 de185d30588dbb7d6507bd32b0dc1dfc 321 SUPERFAMILY SSF46689 267 316 7.57E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS20060 91df684b5176bee2e469c37b3aa9c09c 123 SMART SM00905 11 121 1.3E-31 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS20060 91df684b5176bee2e469c37b3aa9c09c 123 TIGRFAM TIGR00526 folB_dom: FolB domain 8 119 6.1E-32 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS20060 91df684b5176bee2e469c37b3aa9c09c 123 PANTHER PTHR20941:SF6 1 119 1.4E-60 T 23-04-2016 LT40_RS20060 91df684b5176bee2e469c37b3aa9c09c 123 SUPERFAMILY SSF55620 7 120 3.81E-30 T 23-04-2016 LT40_RS20060 91df684b5176bee2e469c37b3aa9c09c 123 Pfam PF02152 Dihydroneopterin aldolase 11 119 3.4E-26 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS20060 91df684b5176bee2e469c37b3aa9c09c 123 PANTHER PTHR20941 1 119 1.4E-60 T 23-04-2016 LT40_RS20060 91df684b5176bee2e469c37b3aa9c09c 123 Gene3D G3DSA:3.30.1130.10 7 120 6.9E-36 T 23-04-2016 LT40_RS06360 eb86dbb4665bbbca63e5cb512b2ef507 451 Gene3D G3DSA:1.20.1530.10 25 264 6.8E-139 T 23-04-2016 IPR023171 Na/H antiporter domain LT40_RS06360 eb86dbb4665bbbca63e5cb512b2ef507 451 Gene3D G3DSA:1.20.1530.10 308 443 6.8E-139 T 23-04-2016 IPR023171 Na/H antiporter domain LT40_RS06360 eb86dbb4665bbbca63e5cb512b2ef507 451 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 29 440 2.8E-113 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LT40_RS06360 eb86dbb4665bbbca63e5cb512b2ef507 451 PANTHER PTHR30341:SF0 17 263 3.0E-145 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LT40_RS06360 eb86dbb4665bbbca63e5cb512b2ef507 451 PANTHER PTHR30341:SF0 297 451 3.0E-145 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LT40_RS06360 eb86dbb4665bbbca63e5cb512b2ef507 451 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 25 450 21.711 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LT40_RS06360 eb86dbb4665bbbca63e5cb512b2ef507 451 PANTHER PTHR30341 17 263 3.0E-145 T 23-04-2016 LT40_RS06360 eb86dbb4665bbbca63e5cb512b2ef507 451 Pfam PF06965 Na+/H+ antiporter 1 27 440 1.2E-137 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 LT40_RS06360 eb86dbb4665bbbca63e5cb512b2ef507 451 PANTHER PTHR30341 297 451 3.0E-145 T 23-04-2016 LT40_RS05890 f993899d341b82640d877d7bddaa05a0 249 PANTHER PTHR30269:SF9 1 248 2.6E-57 T 23-04-2016 LT40_RS05890 f993899d341b82640d877d7bddaa05a0 249 PANTHER PTHR30269 1 248 2.6E-57 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LT40_RS05890 f993899d341b82640d877d7bddaa05a0 249 Pfam PF01925 Sulfite exporter TauE/SafE 8 243 1.1E-44 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LT40_RS09915 8b39697e2b48b557fc916701a48482f4 265 SUPERFAMILY SSF161098 6 254 1.44E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09915 8b39697e2b48b557fc916701a48482f4 265 PANTHER PTHR30193:SF30 1 265 4.2E-93 T 23-04-2016 LT40_RS09915 8b39697e2b48b557fc916701a48482f4 265 PANTHER PTHR30193 1 265 4.2E-93 T 23-04-2016 LT40_RS09915 8b39697e2b48b557fc916701a48482f4 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 254 2.8E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09915 8b39697e2b48b557fc916701a48482f4 265 Gene3D G3DSA:1.10.3720.10 7 254 3.9E-52 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03145 e6cf704c9bdace2fe3180c80367d5421 353 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 351 4.3E-65 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 LT40_RS03145 e6cf704c9bdace2fe3180c80367d5421 353 PANTHER PTHR33529:SF1 1 352 5.2E-134 T 23-04-2016 LT40_RS03145 e6cf704c9bdace2fe3180c80367d5421 353 PANTHER PTHR33529 1 352 5.2E-134 T 23-04-2016 LT40_RS03145 e6cf704c9bdace2fe3180c80367d5421 353 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 351 4.4E-131 T 23-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 LT40_RS00180 61e37405575812a4949945554808561f 237 Gene3D G3DSA:3.30.470.20 92 220 6.3E-53 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS00180 61e37405575812a4949945554808561f 237 Gene3D G3DSA:3.30.200.20 1 91 4.1E-34 T 23-04-2016 LT40_RS00180 61e37405575812a4949945554808561f 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LT40_RS00180 61e37405575812a4949945554808561f 237 PANTHER PTHR11609:SF2 3 235 2.2E-118 T 23-04-2016 LT40_RS00180 61e37405575812a4949945554808561f 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 31.312 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LT40_RS00180 61e37405575812a4949945554808561f 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LT40_RS00180 61e37405575812a4949945554808561f 237 SUPERFAMILY SSF56104 3 233 4.58E-80 T 23-04-2016 LT40_RS00180 61e37405575812a4949945554808561f 237 PANTHER PTHR11609 3 235 2.2E-118 T 23-04-2016 LT40_RS00180 61e37405575812a4949945554808561f 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 3.4E-80 T 23-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LT40_RS00180 61e37405575812a4949945554808561f 237 Pfam PF01259 SAICAR synthetase 6 232 1.9E-64 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 LT40_RS20160 5884eb96a51f0fe298dba7b1ad3b87cb 315 PANTHER PTHR30126:SF26 1 309 3.0E-140 T 23-04-2016 LT40_RS20160 5884eb96a51f0fe298dba7b1ad3b87cb 315 SUPERFAMILY SSF53850 90 299 2.95E-39 T 23-04-2016 LT40_RS20160 5884eb96a51f0fe298dba7b1ad3b87cb 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.2E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS20160 5884eb96a51f0fe298dba7b1ad3b87cb 315 Gene3D G3DSA:3.40.190.10 179 263 8.0E-19 T 23-04-2016 LT40_RS20160 5884eb96a51f0fe298dba7b1ad3b87cb 315 Gene3D G3DSA:3.40.190.10 92 178 9.2E-18 T 23-04-2016 LT40_RS20160 5884eb96a51f0fe298dba7b1ad3b87cb 315 Pfam PF03466 LysR substrate binding domain 88 294 2.1E-39 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS20160 5884eb96a51f0fe298dba7b1ad3b87cb 315 SUPERFAMILY SSF46785 4 86 6.24E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS20160 5884eb96a51f0fe298dba7b1ad3b87cb 315 Gene3D G3DSA:1.10.10.10 3 86 2.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS20160 5884eb96a51f0fe298dba7b1ad3b87cb 315 PANTHER PTHR30126 1 309 3.0E-140 T 23-04-2016 LT40_RS03100 0903bf1c9d1951ef5fc2445b3db3bc89 311 Gene3D G3DSA:3.40.30.10 2 95 3.1E-10 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS03100 0903bf1c9d1951ef5fc2445b3db3bc89 311 Pfam PF13410 Glutathione S-transferase, C-terminal domain 149 214 3.6E-7 T 23-04-2016 LT40_RS03100 0903bf1c9d1951ef5fc2445b3db3bc89 311 Gene3D G3DSA:1.20.1050.10 96 216 2.6E-10 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS03100 0903bf1c9d1951ef5fc2445b3db3bc89 311 PANTHER PTHR11260:SF192 153 217 3.0E-58 T 23-04-2016 LT40_RS03100 0903bf1c9d1951ef5fc2445b3db3bc89 311 PANTHER PTHR11260:SF192 1 131 3.0E-58 T 23-04-2016 LT40_RS03100 0903bf1c9d1951ef5fc2445b3db3bc89 311 SUPERFAMILY SSF52833 4 100 5.95E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS03100 0903bf1c9d1951ef5fc2445b3db3bc89 311 PANTHER PTHR11260 153 217 3.0E-58 T 23-04-2016 LT40_RS03100 0903bf1c9d1951ef5fc2445b3db3bc89 311 PANTHER PTHR11260 1 131 3.0E-58 T 23-04-2016 LT40_RS03100 0903bf1c9d1951ef5fc2445b3db3bc89 311 SUPERFAMILY SSF47616 124 217 1.71E-13 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS03100 0903bf1c9d1951ef5fc2445b3db3bc89 311 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 78 1.0E-12 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LT40_RS14840 1d6957655d95e57754a430d964656c6a 199 PANTHER PTHR34406:SF1 1 198 8.6E-51 T 23-04-2016 LT40_RS14840 1d6957655d95e57754a430d964656c6a 199 Gene3D G3DSA:2.40.128.110 25 198 1.1E-55 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LT40_RS14840 1d6957655d95e57754a430d964656c6a 199 SMART SM00867 25 196 2.1E-65 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LT40_RS14840 1d6957655d95e57754a430d964656c6a 199 SUPERFAMILY SSF101874 22 198 5.62E-51 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LT40_RS14840 1d6957655d95e57754a430d964656c6a 199 PANTHER PTHR34406 1 198 8.6E-51 T 23-04-2016 LT40_RS14840 1d6957655d95e57754a430d964656c6a 199 Pfam PF04264 YceI-like domain 26 194 7.8E-39 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like LT40_RS14840 1d6957655d95e57754a430d964656c6a 199 Hamap MF_00780 Protein YceI [yceI]. 2 199 43.62 T 23-04-2016 IPR023480 Uncharacterised protein family UPF0312/YceI LT40_RS20015 13ec0e073ee096e1d76dbee4c99bd0c2 841 PANTHER PTHR30451 217 841 0.0 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LT40_RS20015 13ec0e073ee096e1d76dbee4c99bd0c2 841 PANTHER PTHR30451 1 199 0.0 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LT40_RS20015 13ec0e073ee096e1d76dbee4c99bd0c2 841 Pfam PF13954 PapC N-terminal domain 14 157 7.9E-38 T 23-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 LT40_RS20015 13ec0e073ee096e1d76dbee4c99bd0c2 841 Pfam PF00577 Outer membrane usher protein 174 743 2.2E-183 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LT40_RS20015 13ec0e073ee096e1d76dbee4c99bd0c2 841 SUPERFAMILY SSF141729 37 149 9.02E-28 T 23-04-2016 LT40_RS20015 13ec0e073ee096e1d76dbee4c99bd0c2 841 PANTHER PTHR30451:SF2 217 841 0.0 T 23-04-2016 LT40_RS20015 13ec0e073ee096e1d76dbee4c99bd0c2 841 PANTHER PTHR30451:SF2 1 199 0.0 T 23-04-2016 LT40_RS20015 13ec0e073ee096e1d76dbee4c99bd0c2 841 Pfam PF13953 PapC C-terminal domain 752 823 1.9E-14 T 23-04-2016 IPR025949 PapC-like, C-terminal domain LT40_RS12995 bb16e8f5b97ef9f09137e8cb729bad15 173 PANTHER PTHR37482:SF1 2 157 7.0E-47 T 23-04-2016 LT40_RS12995 bb16e8f5b97ef9f09137e8cb729bad15 173 Pfam PF04355 SmpA / OmlA family 35 101 1.4E-25 T 23-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 LT40_RS12995 bb16e8f5b97ef9f09137e8cb729bad15 173 PANTHER PTHR37482 2 157 7.0E-47 T 23-04-2016 LT40_RS12995 bb16e8f5b97ef9f09137e8cb729bad15 173 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 6 144 37.085 T 23-04-2016 IPR026592 Outer membrane protein assembly factor BamE LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 Gene3D G3DSA:1.20.1250.20 267 430 3.2E-15 T 23-04-2016 LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 Gene3D G3DSA:1.20.1250.20 15 181 5.4E-35 T 23-04-2016 LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 Gene3D G3DSA:1.20.1250.20 467 491 3.2E-15 T 23-04-2016 LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 Pfam PF07690 Major Facilitator Superfamily 18 410 1.4E-53 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 SUPERFAMILY SSF103473 466 497 2.35E-69 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 SUPERFAMILY SSF103473 249 420 2.35E-69 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 SUPERFAMILY SSF103473 9 196 2.35E-69 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 PANTHER PTHR23501 2 497 1.1E-147 T 23-04-2016 LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 5.3E-8 T 23-04-2016 LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 203 221 5.3E-8 T 23-04-2016 LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 5.3E-8 T 23-04-2016 LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 5.3E-8 T 23-04-2016 LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 419 1.5E-72 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LT40_RS04400 cf0c3652f7eae4d23f4bc4c9d8d3537b 502 PANTHER PTHR23501:SF73 2 497 1.1E-147 T 23-04-2016 LT40_RS20365 0ef0a00c33f64f8b02940f4d7a227ef9 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 298 31.069 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD LT40_RS20365 0ef0a00c33f64f8b02940f4d7a227ef9 298 PANTHER PTHR30349:SF5 1 297 9.9E-121 T 23-04-2016 LT40_RS20365 0ef0a00c33f64f8b02940f4d7a227ef9 298 Pfam PF00589 Phage integrase family 113 283 2.1E-53 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS20365 0ef0a00c33f64f8b02940f4d7a227ef9 298 SUPERFAMILY SSF47823 5 101 7.06E-35 T 23-04-2016 IPR010998 Integrase, Lambda-type, N-terminal LT40_RS20365 0ef0a00c33f64f8b02940f4d7a227ef9 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 5 298 63.885 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 LT40_RS20365 0ef0a00c33f64f8b02940f4d7a227ef9 298 PANTHER PTHR30349 1 297 9.9E-121 T 23-04-2016 LT40_RS20365 0ef0a00c33f64f8b02940f4d7a227ef9 298 Gene3D G3DSA:1.10.443.10 113 289 3.6E-58 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS20365 0ef0a00c33f64f8b02940f4d7a227ef9 298 Gene3D G3DSA:1.10.150.130 7 100 1.7E-27 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal LT40_RS20365 0ef0a00c33f64f8b02940f4d7a227ef9 298 SUPERFAMILY SSF56349 108 296 4.12E-57 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LT40_RS20365 0ef0a00c33f64f8b02940f4d7a227ef9 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 10 297 3.0E-117 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 LT40_RS20365 0ef0a00c33f64f8b02940f4d7a227ef9 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 3.5E-21 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LT40_RS09640 9e096c3dbcb7cdbd6068bc76ef3dd965 354 Gene3D G3DSA:3.40.190.10 43 151 2.1E-7 T 23-04-2016 LT40_RS09640 9e096c3dbcb7cdbd6068bc76ef3dd965 354 Gene3D G3DSA:3.40.190.10 152 294 1.8E-39 T 23-04-2016 LT40_RS09640 9e096c3dbcb7cdbd6068bc76ef3dd965 354 PANTHER PTHR30222 20 352 2.3E-87 T 23-04-2016 LT40_RS09640 9e096c3dbcb7cdbd6068bc76ef3dd965 354 PANTHER PTHR30222:SF2 20 352 2.3E-87 T 23-04-2016 LT40_RS09640 9e096c3dbcb7cdbd6068bc76ef3dd965 354 SUPERFAMILY SSF53850 36 351 2.57E-65 T 23-04-2016 LT40_RS09640 9e096c3dbcb7cdbd6068bc76ef3dd965 354 Pfam PF13416 Bacterial extracellular solute-binding protein 54 304 5.0E-38 T 23-04-2016 LT40_RS15130 1422a1b07d3537f621ecd2a6efed19f0 250 PANTHER PTHR24220:SF550 3 242 4.2E-140 T 23-04-2016 LT40_RS15130 1422a1b07d3537f621ecd2a6efed19f0 250 SMART SM00382 26 214 4.6E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS15130 1422a1b07d3537f621ecd2a6efed19f0 250 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS15130 1422a1b07d3537f621ecd2a6efed19f0 250 PIRSF PIRSF039085 1 241 1.1E-119 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS15130 1422a1b07d3537f621ecd2a6efed19f0 250 SUPERFAMILY SSF52540 1 235 7.86E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15130 1422a1b07d3537f621ecd2a6efed19f0 250 Gene3D G3DSA:3.40.50.300 1 236 1.0E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15130 1422a1b07d3537f621ecd2a6efed19f0 250 Pfam PF00005 ABC transporter 17 165 3.7E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS15130 1422a1b07d3537f621ecd2a6efed19f0 250 PANTHER PTHR24220 3 242 4.2E-140 T 23-04-2016 LT40_RS12990 fc59aae4b3b40f262bb978d78727a224 134 SUPERFAMILY SSF46785 6 132 2.57E-39 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12990 fc59aae4b3b40f262bb978d78727a224 134 PANTHER PTHR33202 6 129 1.5E-36 T 23-04-2016 LT40_RS12990 fc59aae4b3b40f262bb978d78727a224 134 Gene3D G3DSA:1.10.10.10 5 81 1.4E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12990 fc59aae4b3b40f262bb978d78727a224 134 Pfam PF01475 Ferric uptake regulator family 9 129 9.1E-45 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 Pfam PF01494 FAD binding domain 12 358 1.9E-27 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 Gene3D G3DSA:3.50.50.60 13 191 2.5E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 Gene3D G3DSA:3.50.50.60 281 369 2.5E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 307 320 - T 23-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 13 403 1.3E-137 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 308 324 4.8E-18 T 23-04-2016 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 165 180 4.8E-18 T 23-04-2016 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 308 4.8E-18 T 23-04-2016 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 13 35 4.8E-18 T 23-04-2016 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 PANTHER PTHR13789:SF5 1 404 3.7E-141 T 23-04-2016 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 SUPERFAMILY SSF51905 280 397 9.07E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 SUPERFAMILY SSF51905 13 186 9.07E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16940 55ba46a8105d1d008c0b17b7a1b64d7a 414 PANTHER PTHR13789 1 404 3.7E-141 T 23-04-2016 LT40_RS15780 c55ab4f9a4d246edbd5bef3231e92ee2 447 Pfam PF07690 Major Facilitator Superfamily 29 391 6.0E-48 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS15780 c55ab4f9a4d246edbd5bef3231e92ee2 447 PANTHER PTHR11662:SF3 15 424 3.8E-127 T 23-04-2016 LT40_RS15780 c55ab4f9a4d246edbd5bef3231e92ee2 447 SUPERFAMILY SSF103473 15 430 7.59E-82 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS15780 c55ab4f9a4d246edbd5bef3231e92ee2 447 Gene3D G3DSA:1.20.1250.20 20 219 3.4E-42 T 23-04-2016 LT40_RS15780 c55ab4f9a4d246edbd5bef3231e92ee2 447 Gene3D G3DSA:1.20.1250.20 231 430 1.1E-24 T 23-04-2016 LT40_RS15780 c55ab4f9a4d246edbd5bef3231e92ee2 447 PANTHER PTHR11662 15 424 3.8E-127 T 23-04-2016 LT40_RS02150 ae4999648f5de839dc350ac45fa6ae7c 610 SUPERFAMILY SSF53850 49 605 1.21E-114 T 23-04-2016 LT40_RS02150 ae4999648f5de839dc350ac45fa6ae7c 610 PANTHER PTHR30290 2 370 1.6E-198 T 23-04-2016 LT40_RS02150 ae4999648f5de839dc350ac45fa6ae7c 610 Gene3D G3DSA:3.10.105.10 406 574 7.9E-46 T 23-04-2016 LT40_RS02150 ae4999648f5de839dc350ac45fa6ae7c 610 Gene3D G3DSA:3.10.105.10 321 372 7.9E-46 T 23-04-2016 LT40_RS02150 ae4999648f5de839dc350ac45fa6ae7c 610 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 114 518 5.6E-68 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS02150 ae4999648f5de839dc350ac45fa6ae7c 610 Gene3D G3DSA:3.90.76.10 64 229 3.9E-30 T 23-04-2016 LT40_RS02150 ae4999648f5de839dc350ac45fa6ae7c 610 PANTHER PTHR30290 395 610 1.6E-198 T 23-04-2016 LT40_RS02150 ae4999648f5de839dc350ac45fa6ae7c 610 PANTHER PTHR30290:SF2 395 610 1.6E-198 T 23-04-2016 LT40_RS02150 ae4999648f5de839dc350ac45fa6ae7c 610 PIRSF PIRSF002741 2 607 3.8E-93 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS02150 ae4999648f5de839dc350ac45fa6ae7c 610 PANTHER PTHR30290:SF2 2 370 1.6E-198 T 23-04-2016 LT40_RS05850 6fe11c5a9b3095ede6d2dead824f76b2 478 SUPERFAMILY SSF51338 354 460 3.74E-32 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS05850 6fe11c5a9b3095ede6d2dead824f76b2 478 PANTHER PTHR11647:SF1 1 462 1.9E-179 T 23-04-2016 LT40_RS05850 6fe11c5a9b3095ede6d2dead824f76b2 478 PANTHER PTHR11647 1 462 1.9E-179 T 23-04-2016 LT40_RS05850 6fe11c5a9b3095ede6d2dead824f76b2 478 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 7 461 5.4E-163 T 23-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 LT40_RS05850 6fe11c5a9b3095ede6d2dead824f76b2 478 Gene3D G3DSA:3.20.20.140 69 430 4.3E-122 T 23-04-2016 LT40_RS05850 6fe11c5a9b3095ede6d2dead824f76b2 478 Pfam PF01979 Amidohydrolase family 52 444 2.3E-30 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LT40_RS05850 6fe11c5a9b3095ede6d2dead824f76b2 478 Gene3D G3DSA:2.30.40.10 5 68 4.0E-23 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS05850 6fe11c5a9b3095ede6d2dead824f76b2 478 SUPERFAMILY SSF51338 4 67 8.41E-15 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS05850 6fe11c5a9b3095ede6d2dead824f76b2 478 SUPERFAMILY SSF51556 55 390 1.15E-102 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS14715 4580b5de07c51d666fd6c360ca50f831 83 PANTHER PTHR24960 1 79 1.2E-28 T 23-04-2016 LT40_RS14715 4580b5de07c51d666fd6c360ca50f831 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS14715 4580b5de07c51d666fd6c360ca50f831 83 Gene3D G3DSA:3.30.70.20 4 77 5.4E-19 T 23-04-2016 LT40_RS14715 4580b5de07c51d666fd6c360ca50f831 83 PANTHER PTHR24960:SF38 1 79 1.2E-28 T 23-04-2016 LT40_RS14715 4580b5de07c51d666fd6c360ca50f831 83 Pfam PF00037 4Fe-4S binding domain 4 25 2.0E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LT40_RS14715 4580b5de07c51d666fd6c360ca50f831 83 SUPERFAMILY SSF54862 4 77 2.51E-19 T 23-04-2016 LT40_RS09005 bcfe6f97a5f55a8b5b0c14656c6b78c9 160 Pfam PF00583 Acetyltransferase (GNAT) family 46 139 3.2E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS09005 bcfe6f97a5f55a8b5b0c14656c6b78c9 160 Gene3D G3DSA:3.40.630.30 9 153 5.0E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS09005 bcfe6f97a5f55a8b5b0c14656c6b78c9 160 SUPERFAMILY SSF55729 37 150 1.18E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS15565 0c88e24a56c38e5805ad3861c657fea6 108 PANTHER PTHR10160 12 97 6.3E-32 T 23-04-2016 LT40_RS15565 0c88e24a56c38e5805ad3861c657fea6 108 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 13 96 1.7E-35 T 23-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 LT40_RS15565 0c88e24a56c38e5805ad3861c657fea6 108 PANTHER PTHR10160:SF19 12 97 6.3E-32 T 23-04-2016 LT40_RS20770 be2ce39e8cbdd752515afd6e7937112a 133 PANTHER PTHR34187 26 132 3.6E-19 T 23-04-2016 LT40_RS20770 be2ce39e8cbdd752515afd6e7937112a 133 Pfam PF02656 Domain of unknown function (DUF202) 32 98 9.9E-15 T 23-04-2016 IPR003807 Domain of unknown function DUF202 LT40_RS15840 6fbeb96185fcb7af00bb1bff87b814ba 181 Gene3D G3DSA:2.160.10.10 4 173 2.5E-42 T 23-04-2016 LT40_RS15840 6fbeb96185fcb7af00bb1bff87b814ba 181 PANTHER PTHR13061 3 176 3.6E-72 T 23-04-2016 LT40_RS15840 6fbeb96185fcb7af00bb1bff87b814ba 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 45 7.8E-5 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS15840 6fbeb96185fcb7af00bb1bff87b814ba 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 129 2.5E-5 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS15840 6fbeb96185fcb7af00bb1bff87b814ba 181 SUPERFAMILY SSF51161 4 173 4.02E-43 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS01275 8f02e8e8c52418f47d96fa9b62b64597 302 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 8 286 8.4E-80 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 LT40_RS01275 8f02e8e8c52418f47d96fa9b62b64597 302 Gene3D G3DSA:1.10.8.10 8 99 1.7E-11 T 23-04-2016 LT40_RS01275 8f02e8e8c52418f47d96fa9b62b64597 302 PANTHER PTHR18895:SF66 1 290 4.7E-151 T 23-04-2016 LT40_RS01275 8f02e8e8c52418f47d96fa9b62b64597 302 SUPERFAMILY SSF53335 9 286 7.25E-54 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS01275 8f02e8e8c52418f47d96fa9b62b64597 302 PIRSF PIRSF037167 1 300 1.6E-133 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 LT40_RS01275 8f02e8e8c52418f47d96fa9b62b64597 302 Pfam PF05175 Methyltransferase small domain 127 208 1.2E-16 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 LT40_RS01275 8f02e8e8c52418f47d96fa9b62b64597 302 PANTHER PTHR18895 1 290 4.7E-151 T 23-04-2016 LT40_RS01275 8f02e8e8c52418f47d96fa9b62b64597 302 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 197 203 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LT40_RS01275 8f02e8e8c52418f47d96fa9b62b64597 302 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 6 287 7.3E-126 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 LT40_RS01275 8f02e8e8c52418f47d96fa9b62b64597 302 Gene3D G3DSA:3.40.50.150 102 283 1.6E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS01275 8f02e8e8c52418f47d96fa9b62b64597 302 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 1 293 50.876 T 23-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 LT40_RS13455 de06650a7d8739d8ce9744a4cf184f4d 292 PIRSF PIRSF000401 1 292 2.5E-90 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LT40_RS13455 de06650a7d8739d8ce9744a4cf184f4d 292 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 285 4.1E-92 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LT40_RS13455 de06650a7d8739d8ce9744a4cf184f4d 292 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 33.811 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LT40_RS13455 de06650a7d8739d8ce9744a4cf184f4d 292 SUPERFAMILY SSF53335 71 289 1.92E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS13455 de06650a7d8739d8ce9744a4cf184f4d 292 PANTHER PTHR18895:SF69 16 292 4.7E-151 T 23-04-2016 LT40_RS13455 de06650a7d8739d8ce9744a4cf184f4d 292 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 291 2.3E-98 T 23-04-2016 LT40_RS13455 de06650a7d8739d8ce9744a4cf184f4d 292 Gene3D G3DSA:3.40.50.150 97 285 8.4E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS13455 de06650a7d8739d8ce9744a4cf184f4d 292 PANTHER PTHR18895 16 292 4.7E-151 T 23-04-2016 LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 Gene3D G3DSA:3.40.190.10 121 203 8.0E-11 T 23-04-2016 LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 SUPERFAMILY SSF53955 243 398 1.41E-32 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 SMART SM00062 42 267 1.8E-34 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 Gene3D G3DSA:1.10.530.10 256 395 9.0E-41 T 23-04-2016 LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 Gene3D G3DSA:1.10.530.10 430 451 9.0E-41 T 23-04-2016 LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 PANTHER PTHR21666:SF215 272 483 2.5E-113 T 23-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 Pfam PF01464 Transglycosylase SLT domain 292 400 1.2E-22 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 266 8.1E-33 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 SUPERFAMILY SSF53850 43 266 4.47E-38 T 23-04-2016 LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 11 476 45.415 T 23-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 310 338 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 PANTHER PTHR21666 272 483 2.5E-113 T 23-04-2016 LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 Gene3D G3DSA:3.40.190.10 225 255 3.0E-18 T 23-04-2016 LT40_RS20265 68c19168e12d0d4632cb40253a38462f 486 Gene3D G3DSA:3.40.190.10 39 120 3.0E-18 T 23-04-2016 LT40_RS16090 7b3afc17326ff87012f15d5f5c3ee21c 135 Pfam PF03899 ATP synthase I chain 19 112 9.3E-22 T 23-04-2016 IPR005598 ATP synthase protein I LT40_RS12415 60f36a6be308d71d8a5e410b64be6490 332 Gene3D G3DSA:1.10.600.10 11 319 1.7E-86 T 23-04-2016 IPR008949 Isoprenoid synthase domain LT40_RS12415 60f36a6be308d71d8a5e410b64be6490 332 SUPERFAMILY SSF48576 12 297 1.87E-81 T 23-04-2016 IPR008949 Isoprenoid synthase domain LT40_RS12415 60f36a6be308d71d8a5e410b64be6490 332 PANTHER PTHR31480:SF0 12 307 2.3E-67 T 23-04-2016 LT40_RS12415 60f36a6be308d71d8a5e410b64be6490 332 Pfam PF00494 Squalene/phytoene synthase 21 279 5.2E-70 T 23-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 LT40_RS12415 60f36a6be308d71d8a5e410b64be6490 332 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 168 193 - T 23-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 LT40_RS12415 60f36a6be308d71d8a5e410b64be6490 332 PANTHER PTHR31480 12 307 2.3E-67 T 23-04-2016 LT40_RS12415 60f36a6be308d71d8a5e410b64be6490 332 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 138 153 - T 23-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 LT40_RS06890 88a261b6ba0aab9e3ec5e182b0089609 114 Pfam PF04320 Protein with unknown function (DUF469) 7 105 3.5E-36 T 23-04-2016 IPR007416 Protein of unknown function DUF469 LT40_RS06890 88a261b6ba0aab9e3ec5e182b0089609 114 PANTHER PTHR38778:SF1 2 112 2.7E-43 T 23-04-2016 LT40_RS06890 88a261b6ba0aab9e3ec5e182b0089609 114 PANTHER PTHR38778 2 112 2.7E-43 T 23-04-2016 LT40_RS03315 b1d5a82b8109161d9079d142f2696e8b 311 Pfam PF06481 COX Aromatic Rich Motif 237 281 3.9E-17 T 23-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 LT40_RS03315 b1d5a82b8109161d9079d142f2696e8b 311 Gene3D G3DSA:2.60.40.420 113 277 5.0E-44 T 23-04-2016 IPR008972 Cupredoxin LT40_RS03315 b1d5a82b8109161d9079d142f2696e8b 311 PIRSF PIRSF000292 1 309 3.8E-133 T 23-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 LT40_RS03315 b1d5a82b8109161d9079d142f2696e8b 311 Gene3D G3DSA:1.10.287.90 27 111 3.0E-32 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 LT40_RS03315 b1d5a82b8109161d9079d142f2696e8b 311 SUPERFAMILY SSF49503 118 278 2.33E-53 T 23-04-2016 IPR008972 Cupredoxin LT40_RS03315 b1d5a82b8109161d9079d142f2696e8b 311 PANTHER PTHR22888:SF13 1 265 4.8E-141 T 23-04-2016 LT40_RS03315 b1d5a82b8109161d9079d142f2696e8b 311 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 147 217 2.4E-6 T 23-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 LT40_RS03315 b1d5a82b8109161d9079d142f2696e8b 311 PANTHER PTHR22888 1 265 4.8E-141 T 23-04-2016 LT40_RS03315 b1d5a82b8109161d9079d142f2696e8b 311 SUPERFAMILY SSF81464 26 116 1.05E-21 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 LT40_RS03315 b1d5a82b8109161d9079d142f2696e8b 311 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 15 237 3.8E-114 T 23-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 LT40_RS19055 478908faf05b344b5512d28f5efd0d5e 504 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS19055 478908faf05b344b5512d28f5efd0d5e 504 Pfam PF00005 ABC transporter 22 174 9.9E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS19055 478908faf05b344b5512d28f5efd0d5e 504 Pfam PF00005 ABC transporter 275 429 1.4E-14 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS19055 478908faf05b344b5512d28f5efd0d5e 504 SMART SM00382 31 222 1.3E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS19055 478908faf05b344b5512d28f5efd0d5e 504 Gene3D G3DSA:3.40.50.300 4 235 1.3E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19055 478908faf05b344b5512d28f5efd0d5e 504 Gene3D G3DSA:3.40.50.300 258 486 5.9E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19055 478908faf05b344b5512d28f5efd0d5e 504 PANTHER PTHR24220 8 385 5.0E-119 T 23-04-2016 LT40_RS19055 478908faf05b344b5512d28f5efd0d5e 504 PANTHER PTHR24220:SF239 8 385 5.0E-119 T 23-04-2016 LT40_RS19055 478908faf05b344b5512d28f5efd0d5e 504 SUPERFAMILY SSF52540 266 488 5.49E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19055 478908faf05b344b5512d28f5efd0d5e 504 SUPERFAMILY SSF52540 6 231 6.39E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04910 dc52f511ca2f2bc23150e554be0fa28b 68 Pfam PF04102 SlyX 3 68 2.4E-20 T 23-04-2016 IPR007236 SlyX LT40_RS04910 dc52f511ca2f2bc23150e554be0fa28b 68 Gene3D G3DSA:1.20.5.300 2 47 1.6E-15 T 23-04-2016 LT40_RS04910 dc52f511ca2f2bc23150e554be0fa28b 68 PANTHER PTHR36508 1 68 6.1E-17 T 23-04-2016 LT40_RS04910 dc52f511ca2f2bc23150e554be0fa28b 68 Hamap MF_00715 Protein SlyX [slyX]. 2 68 15.699 T 23-04-2016 IPR007236 SlyX LT40_RS19110 48c60c05c2cdc6eac05813f636d0c243 203 PANTHER PTHR30231 2 171 7.4E-37 T 23-04-2016 LT40_RS19110 48c60c05c2cdc6eac05813f636d0c243 203 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 167 1.4E-21 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS19110 48c60c05c2cdc6eac05813f636d0c243 203 Gene3D G3DSA:3.30.420.10 3 171 2.0E-47 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS19110 48c60c05c2cdc6eac05813f636d0c243 203 PANTHER PTHR30231:SF4 2 171 7.4E-37 T 23-04-2016 LT40_RS19110 48c60c05c2cdc6eac05813f636d0c243 203 SMART SM00479 3 170 8.5E-32 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS19110 48c60c05c2cdc6eac05813f636d0c243 203 Pfam PF00929 Exonuclease 6 160 1.5E-26 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS19110 48c60c05c2cdc6eac05813f636d0c243 203 SUPERFAMILY SSF53098 3 166 1.25E-44 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS03110 2d380f713bb39b340e0abe750f5c066b 93 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 6.0E-10 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS03110 2d380f713bb39b340e0abe750f5c066b 93 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 6.0E-10 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS03110 2d380f713bb39b340e0abe750f5c066b 93 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 6.0E-10 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS03110 2d380f713bb39b340e0abe750f5c066b 93 Gene3D G3DSA:4.10.520.10 2 93 2.5E-28 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LT40_RS03110 2d380f713bb39b340e0abe750f5c066b 93 SMART SM00411 3 92 1.1E-26 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS03110 2d380f713bb39b340e0abe750f5c066b 93 Pfam PF00216 Bacterial DNA-binding protein 3 92 1.8E-26 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS03110 2d380f713bb39b340e0abe750f5c066b 93 PANTHER PTHR33175 2 92 1.8E-31 T 23-04-2016 LT40_RS03110 2d380f713bb39b340e0abe750f5c066b 93 SUPERFAMILY SSF47729 3 92 7.36E-26 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LT40_RS02950 71b8792f64ccb728958a96e19b48ca1b 212 PANTHER PTHR11002:SF20 1 208 5.2E-130 T 23-04-2016 LT40_RS02950 71b8792f64ccb728958a96e19b48ca1b 212 SUPERFAMILY SSF53056 2 203 1.22E-74 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS02950 71b8792f64ccb728958a96e19b48ca1b 212 Gene3D G3DSA:3.40.1050.10 1 203 1.5E-77 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS02950 71b8792f64ccb728958a96e19b48ca1b 212 SMART SM00947 30 193 1.4E-65 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS02950 71b8792f64ccb728958a96e19b48ca1b 212 PANTHER PTHR11002 1 208 5.2E-130 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS02950 71b8792f64ccb728958a96e19b48ca1b 212 Pfam PF00484 Carbonic anhydrase 38 188 2.0E-50 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS02950 71b8792f64ccb728958a96e19b48ca1b 212 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 LT40_RS06240 eddceb0225a5339dba5fbb40d4c56ea3 290 Pfam PF16733 Rhomboid N-terminal domain 1 67 4.8E-31 T 23-04-2016 IPR031976 Rhomboid protease, N-terminal LT40_RS06240 eddceb0225a5339dba5fbb40d4c56ea3 290 Pfam PF01694 Rhomboid family 139 280 1.2E-27 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 LT40_RS06240 eddceb0225a5339dba5fbb40d4c56ea3 290 SUPERFAMILY SSF144091 86 287 4.19E-35 T 23-04-2016 LT40_RS06240 eddceb0225a5339dba5fbb40d4c56ea3 290 Gene3D G3DSA:1.20.1540.10 88 280 6.8E-30 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 LT40_RS06240 eddceb0225a5339dba5fbb40d4c56ea3 290 PANTHER PTHR22936 127 288 9.5E-46 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 LT40_RS06240 eddceb0225a5339dba5fbb40d4c56ea3 290 PANTHER PTHR22936:SF30 127 288 9.5E-46 T 23-04-2016 LT40_RS04330 07d9cb42d0a6673bdcdfb64592476aba 448 SUPERFAMILY SSF103473 15 439 1.14E-79 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04330 07d9cb42d0a6673bdcdfb64592476aba 448 PANTHER PTHR24064:SF234 12 438 1.6E-188 T 23-04-2016 LT40_RS04330 07d9cb42d0a6673bdcdfb64592476aba 448 Gene3D G3DSA:1.20.1250.20 264 438 3.5E-25 T 23-04-2016 LT40_RS04330 07d9cb42d0a6673bdcdfb64592476aba 448 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS04330 07d9cb42d0a6673bdcdfb64592476aba 448 ProSitePatterns PS00216 Sugar transport proteins signature 1. 84 100 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS04330 07d9cb42d0a6673bdcdfb64592476aba 448 PANTHER PTHR24064 12 438 1.6E-188 T 23-04-2016 LT40_RS04330 07d9cb42d0a6673bdcdfb64592476aba 448 Pfam PF07690 Major Facilitator Superfamily 35 405 1.9E-42 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS04330 07d9cb42d0a6673bdcdfb64592476aba 448 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 13 412 1.4E-155 T 23-04-2016 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0005215|GO:0006810|GO:0016021 LT40_RS04330 07d9cb42d0a6673bdcdfb64592476aba 448 Gene3D G3DSA:1.20.1250.20 24 209 3.3E-37 T 23-04-2016 LT40_RS11735 dc3174abac47b856761dd8e6ed2938d9 157 PANTHER PTHR33164 23 149 2.7E-36 T 23-04-2016 LT40_RS11735 dc3174abac47b856761dd8e6ed2938d9 157 Pfam PF01047 MarR family 48 106 8.5E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS11735 dc3174abac47b856761dd8e6ed2938d9 157 PANTHER PTHR33164:SF5 23 149 2.7E-36 T 23-04-2016 LT40_RS11735 dc3174abac47b856761dd8e6ed2938d9 157 Gene3D G3DSA:1.10.10.10 22 149 7.6E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11735 dc3174abac47b856761dd8e6ed2938d9 157 SMART SM00347 41 137 6.1E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS11735 dc3174abac47b856761dd8e6ed2938d9 157 SUPERFAMILY SSF46785 22 149 1.05E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11735 dc3174abac47b856761dd8e6ed2938d9 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 97 6.6E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS11735 dc3174abac47b856761dd8e6ed2938d9 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 101 117 6.6E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS11735 dc3174abac47b856761dd8e6ed2938d9 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 81 6.6E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS01590 e040a3ecf0cb470df39b63ca7d81a702 383 PANTHER PTHR11496:SF68 1 383 8.3E-132 T 23-04-2016 LT40_RS01590 e040a3ecf0cb470df39b63ca7d81a702 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 23-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 LT40_RS01590 e040a3ecf0cb470df39b63ca7d81a702 383 Gene3D G3DSA:1.20.1090.10 186 383 1.9E-63 T 23-04-2016 LT40_RS01590 e040a3ecf0cb470df39b63ca7d81a702 383 PANTHER PTHR11496 1 383 8.3E-132 T 23-04-2016 LT40_RS01590 e040a3ecf0cb470df39b63ca7d81a702 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 374 7.6E-112 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 LT40_RS01590 e040a3ecf0cb470df39b63ca7d81a702 383 SUPERFAMILY SSF56796 3 382 1.44E-113 T 23-04-2016 LT40_RS01590 e040a3ecf0cb470df39b63ca7d81a702 383 Gene3D G3DSA:3.40.50.1970 1 184 3.8E-50 T 23-04-2016 LT40_RS02845 3e9f5d6651d540a290eb0f7b8a61d898 92 PANTHER PTHR34702:SF1 1 92 1.2E-16 T 23-04-2016 LT40_RS02845 3e9f5d6651d540a290eb0f7b8a61d898 92 PANTHER PTHR34702 1 92 1.2E-16 T 23-04-2016 LT40_RS02845 3e9f5d6651d540a290eb0f7b8a61d898 92 PIRSF PIRSF028784 1 92 1.3E-26 T 23-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 LT40_RS02845 3e9f5d6651d540a290eb0f7b8a61d898 92 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 34 85 1.2E-17 T 23-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 LT40_RS14625 2a55607c99c3317db9952a7f3866fefc 198 Pfam PF01725 Ham1 family 7 192 2.7E-54 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LT40_RS14625 2a55607c99c3317db9952a7f3866fefc 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 7 194 1.2E-53 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LT40_RS14625 2a55607c99c3317db9952a7f3866fefc 198 PANTHER PTHR11067:SF9 1 195 9.5E-78 T 23-04-2016 LT40_RS14625 2a55607c99c3317db9952a7f3866fefc 198 PANTHER PTHR11067 1 195 9.5E-78 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LT40_RS14625 2a55607c99c3317db9952a7f3866fefc 198 Gene3D G3DSA:3.90.950.10 4 195 1.2E-74 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LT40_RS14625 2a55607c99c3317db9952a7f3866fefc 198 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 5 197 47.457 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LT40_RS14625 2a55607c99c3317db9952a7f3866fefc 198 SUPERFAMILY SSF52972 3 195 1.07E-68 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 535 557 2.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 2.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 568 578 2.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 497 515 2.8E-49 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 Gene3D G3DSA:3.90.740.10 247 467 2.4E-49 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 Gene3D G3DSA:1.10.730.10 658 802 4.4E-32 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 Pfam PF08264 Anticodon-binding domain of tRNA 716 827 1.2E-14 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 Pfam PF09334 tRNA synthetases class I (M) 38 171 3.9E-20 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 Gene3D G3DSA:3.40.50.620 500 584 1.9E-131 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 Gene3D G3DSA:3.40.50.620 630 657 1.9E-131 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 Gene3D G3DSA:3.40.50.620 6 228 1.9E-131 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 413 2.3E-52 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PANTHER PTHR11946 248 273 0.0 T 23-04-2016 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PANTHER PTHR11946 630 864 0.0 T 23-04-2016 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PANTHER PTHR11946 294 585 0.0 T 23-04-2016 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PANTHER PTHR11946 1 206 0.0 T 23-04-2016 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PANTHER PTHR11946:SF7 248 273 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PANTHER PTHR11946:SF7 630 864 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PANTHER PTHR11946:SF7 294 585 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 PANTHER PTHR11946:SF7 1 206 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 SUPERFAMILY SSF52374 4 226 2.41E-143 T 23-04-2016 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 SUPERFAMILY SSF52374 426 680 2.41E-143 T 23-04-2016 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 588 659 7.9E-7 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 428 583 3.1E-7 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 SUPERFAMILY SSF47323 674 863 2.24E-27 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 864 21.62 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 SUPERFAMILY SSF50677 247 421 3.87E-38 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LT40_RS04520 6b6fc5da09b2523988a789659476e281 864 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 864 1.7E-296 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS02610 94f3f832d81592417597f95257cf144f 161 PANTHER PTHR30009 9 161 7.0E-41 T 23-04-2016 LT40_RS02610 94f3f832d81592417597f95257cf144f 161 Pfam PF03918 Cytochrome C biogenesis protein 9 151 9.6E-52 T 23-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family LT40_RS02610 94f3f832d81592417597f95257cf144f 161 PANTHER PTHR30009:SF6 9 161 7.0E-41 T 23-04-2016 LT40_RS10215 512be50d00a67d63735436c2f8501ca3 175 PANTHER PTHR37512 1 174 1.4E-74 T 23-04-2016 LT40_RS10215 512be50d00a67d63735436c2f8501ca3 175 Pfam PF13521 AAA domain 4 160 1.9E-27 T 23-04-2016 LT40_RS10215 512be50d00a67d63735436c2f8501ca3 175 SUPERFAMILY SSF52540 2 169 6.21E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10215 512be50d00a67d63735436c2f8501ca3 175 Gene3D G3DSA:3.40.50.300 1 165 1.3E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00310 2009c96c5db9134b511cd1e0e9ced1b0 377 Gene3D G3DSA:3.30.420.10 4 183 1.7E-20 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS00310 2009c96c5db9134b511cd1e0e9ced1b0 377 SUPERFAMILY SSF47819 195 301 2.43E-30 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 LT40_RS00310 2009c96c5db9134b511cd1e0e9ced1b0 377 Pfam PF00570 HRDC domain 214 281 2.4E-18 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LT40_RS00310 2009c96c5db9134b511cd1e0e9ced1b0 377 SUPERFAMILY SSF47819 296 370 1.1E-15 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 LT40_RS00310 2009c96c5db9134b511cd1e0e9ced1b0 377 TIGRFAM TIGR01388 rnd: ribonuclease D 7 371 1.2E-133 T 23-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 LT40_RS00310 2009c96c5db9134b511cd1e0e9ced1b0 377 SMART SM00474 5 173 6.2E-41 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LT40_RS00310 2009c96c5db9134b511cd1e0e9ced1b0 377 SMART SM00341 211 291 5.2E-10 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 LT40_RS00310 2009c96c5db9134b511cd1e0e9ced1b0 377 SUPERFAMILY SSF53098 4 211 1.66E-65 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS00310 2009c96c5db9134b511cd1e0e9ced1b0 377 PANTHER PTHR12124 5 303 4.6E-68 T 23-04-2016 LT40_RS00310 2009c96c5db9134b511cd1e0e9ced1b0 377 Hamap MF_01899 Ribonuclease D [rnd]. 5 371 41.337 T 23-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 LT40_RS00310 2009c96c5db9134b511cd1e0e9ced1b0 377 Pfam PF01612 3'-5' exonuclease 5 172 7.6E-42 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LT40_RS16820 af84ef3750ae893bc3f5681a869215b6 210 Pfam PF01810 LysE type translocator 15 204 4.8E-30 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS16820 af84ef3750ae893bc3f5681a869215b6 210 PIRSF PIRSF006324 1 207 9.3E-51 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS16820 af84ef3750ae893bc3f5681a869215b6 210 PANTHER PTHR30086:SF14 1 210 1.7E-86 T 23-04-2016 LT40_RS16820 af84ef3750ae893bc3f5681a869215b6 210 PANTHER PTHR30086 1 210 1.7E-86 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 388 7.6E-126 T 23-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 PANTHER PTHR13789 1 395 1.4E-164 T 23-04-2016 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 Pfam PF01494 FAD binding domain 6 337 2.5E-23 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.4E-12 T 23-04-2016 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 2.4E-12 T 23-04-2016 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.4E-12 T 23-04-2016 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 2.4E-12 T 23-04-2016 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 3.2E-138 T 23-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 Gene3D G3DSA:3.50.50.60 269 355 8.1E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 Gene3D G3DSA:3.50.50.60 5 183 8.1E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 PANTHER PTHR13789:SF214 1 395 1.4E-164 T 23-04-2016 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 SUPERFAMILY SSF51905 4 178 3.4E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16935 cacc8ac140f8e0c90d5943e8ee2bc924 398 SUPERFAMILY SSF51905 268 383 3.4E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS20255 d9c57b167fef931529b1d0da94dd0d0c 457 SUPERFAMILY SSF49503 324 456 1.99E-32 T 23-04-2016 IPR008972 Cupredoxin LT40_RS20255 d9c57b167fef931529b1d0da94dd0d0c 457 SUPERFAMILY SSF49503 43 162 2.45E-35 T 23-04-2016 IPR008972 Cupredoxin LT40_RS20255 d9c57b167fef931529b1d0da94dd0d0c 457 Gene3D G3DSA:2.60.40.420 157 280 2.7E-14 T 23-04-2016 IPR008972 Cupredoxin LT40_RS20255 d9c57b167fef931529b1d0da94dd0d0c 457 ProSitePatterns PS00080 Multicopper oxidases signature 2. 439 450 - T 23-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 LT40_RS20255 d9c57b167fef931529b1d0da94dd0d0c 457 PANTHER PTHR11709 55 456 1.0E-84 T 23-04-2016 LT40_RS20255 d9c57b167fef931529b1d0da94dd0d0c 457 Pfam PF07731 Multicopper oxidase 359 456 5.2E-25 T 23-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 LT40_RS20255 d9c57b167fef931529b1d0da94dd0d0c 457 Gene3D G3DSA:2.60.40.420 305 456 1.5E-42 T 23-04-2016 IPR008972 Cupredoxin LT40_RS20255 d9c57b167fef931529b1d0da94dd0d0c 457 Pfam PF07732 Multicopper oxidase 53 160 3.0E-33 T 23-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 LT40_RS20255 d9c57b167fef931529b1d0da94dd0d0c 457 Gene3D G3DSA:2.60.40.420 36 156 1.4E-34 T 23-04-2016 IPR008972 Cupredoxin LT40_RS20255 d9c57b167fef931529b1d0da94dd0d0c 457 SUPERFAMILY SSF49503 161 280 2.04E-15 T 23-04-2016 IPR008972 Cupredoxin LT40_RS20255 d9c57b167fef931529b1d0da94dd0d0c 457 PANTHER PTHR11709:SF33 55 456 1.0E-84 T 23-04-2016 LT40_RS19660 87bb3837a2a3d0c740a231c1cbd652b3 118 SUPERFAMILY SSF47598 72 113 3.78E-5 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LT40_RS19660 87bb3837a2a3d0c740a231c1cbd652b3 118 Pfam PF05534 HicB family 55 105 3.8E-15 T 23-04-2016 IPR008651 Uncharacterised protein family HicB LT40_RS19660 87bb3837a2a3d0c740a231c1cbd652b3 118 SUPERFAMILY SSF143100 2 76 4.18E-8 T 23-04-2016 LT40_RS18920 76bdb5ed75fcf5601a495a4d89d8f9c0 208 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 206 25.355 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LT40_RS18920 76bdb5ed75fcf5601a495a4d89d8f9c0 208 Gene3D G3DSA:3.20.20.70 4 200 1.3E-62 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS18920 76bdb5ed75fcf5601a495a4d89d8f9c0 208 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 197 2.6E-59 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LT40_RS18920 76bdb5ed75fcf5601a495a4d89d8f9c0 208 Pfam PF02581 Thiamine monophosphate synthase/TENI 6 185 1.9E-55 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LT40_RS18920 76bdb5ed75fcf5601a495a4d89d8f9c0 208 SUPERFAMILY SSF51391 3 199 7.32E-61 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 LT40_RS18920 76bdb5ed75fcf5601a495a4d89d8f9c0 208 PANTHER PTHR20857:SF15 6 201 4.5E-58 T 23-04-2016 LT40_RS18920 76bdb5ed75fcf5601a495a4d89d8f9c0 208 PANTHER PTHR20857 6 201 4.5E-58 T 23-04-2016 LT40_RS06315 8a29766b8f352261be10747807846a22 427 PANTHER PTHR33362 1 427 8.4E-243 T 23-04-2016 LT40_RS06315 8a29766b8f352261be10747807846a22 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 6.1E-147 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 LT40_RS06315 8a29766b8f352261be10747807846a22 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 414 7.4E-126 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit LT40_RS06315 8a29766b8f352261be10747807846a22 427 PANTHER PTHR33362:SF6 1 427 8.4E-243 T 23-04-2016 LT40_RS06315 8a29766b8f352261be10747807846a22 427 PIRSF PIRSF006066 1 427 9.7E-156 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 LT40_RS15115 4fbcdf688b83954a2e406e2ec2784612 259 SMART SM00346 10 100 2.3E-28 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS15115 4fbcdf688b83954a2e406e2ec2784612 259 Pfam PF01614 Bacterial transcriptional regulator 130 253 4.6E-29 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal LT40_RS15115 4fbcdf688b83954a2e406e2ec2784612 259 Pfam PF09339 IclR helix-turn-helix domain 12 62 8.8E-16 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS15115 4fbcdf688b83954a2e406e2ec2784612 259 PANTHER PTHR30136 11 252 5.3E-61 T 23-04-2016 LT40_RS15115 4fbcdf688b83954a2e406e2ec2784612 259 Gene3D G3DSA:3.30.450.40 84 254 1.0E-49 T 23-04-2016 IPR029016 GAF domain-like LT40_RS15115 4fbcdf688b83954a2e406e2ec2784612 259 Gene3D G3DSA:1.10.10.10 3 81 3.0E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15115 4fbcdf688b83954a2e406e2ec2784612 259 SUPERFAMILY SSF55781 76 252 2.16E-46 T 23-04-2016 IPR029016 GAF domain-like LT40_RS15115 4fbcdf688b83954a2e406e2ec2784612 259 SUPERFAMILY SSF46785 11 83 8.96E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10200 418e458b2d2d17578b233978bd0df66b 338 PANTHER PTHR32039:SF10 5 303 3.8E-108 T 23-04-2016 LT40_RS10200 418e458b2d2d17578b233978bd0df66b 338 Pfam PF07728 AAA domain (dynein-related subfamily) 33 163 4.7E-12 T 23-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 LT40_RS10200 418e458b2d2d17578b233978bd0df66b 338 PANTHER PTHR32039 5 303 3.8E-108 T 23-04-2016 LT40_RS10200 418e458b2d2d17578b233978bd0df66b 338 Gene3D G3DSA:1.10.8.80 215 289 7.8E-25 T 23-04-2016 LT40_RS10200 418e458b2d2d17578b233978bd0df66b 338 SUPERFAMILY SSF52540 7 283 2.38E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10200 418e458b2d2d17578b233978bd0df66b 338 SMART SM00382 30 174 5.1E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10200 418e458b2d2d17578b233978bd0df66b 338 Gene3D G3DSA:3.40.50.300 6 167 1.3E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01120 ac68a0d5723c4bbe43ef36371d5eff73 167 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 157 21.987 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS01120 ac68a0d5723c4bbe43ef36371d5eff73 167 Gene3D G3DSA:3.40.50.960 11 158 1.5E-43 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS01120 ac68a0d5723c4bbe43ef36371d5eff73 167 PANTHER PTHR21058 15 163 3.1E-34 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS01120 ac68a0d5723c4bbe43ef36371d5eff73 167 SUPERFAMILY SSF52121 11 158 4.71E-45 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS01120 ac68a0d5723c4bbe43ef36371d5eff73 167 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 15 153 4.5E-35 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 PANTHER PTHR11564:SF7 1 439 5.2E-264 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 Gene3D G3DSA:3.40.50.300 96 297 3.5E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 SMART SM00962 100 296 3.2E-113 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 432 7.4E-178 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 PANTHER PTHR11564 1 439 5.2E-264 T 23-04-2016 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 Gene3D G3DSA:1.10.260.30 329 434 1.6E-37 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.3E-21 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 SUPERFAMILY SSF52540 42 354 7.35E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.3E-73 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 SMART SM00963 1 86 5.2E-36 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 Gene3D G3DSA:1.20.120.140 2 88 3.0E-36 T 23-04-2016 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 SUPERFAMILY SSF47446 329 433 1.39E-34 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 443 34.309 T 23-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 Pfam PF02978 Signal peptide binding domain 329 430 9.3E-32 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 LT40_RS20340 07d8346d432654e5fe1692fa2d6d49d7 460 SMART SM00382 99 247 5.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS09510 17a22cb365c89ffc5c0c8e6a1a1b2d0e 272 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 269 2.8E-83 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 LT40_RS09510 17a22cb365c89ffc5c0c8e6a1a1b2d0e 272 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 23-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 LT40_RS09510 17a22cb365c89ffc5c0c8e6a1a1b2d0e 272 Gene3D G3DSA:3.60.10.10 1 269 2.1E-81 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS09510 17a22cb365c89ffc5c0c8e6a1a1b2d0e 272 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 269 1.7E-94 T 23-04-2016 LT40_RS09510 17a22cb365c89ffc5c0c8e6a1a1b2d0e 272 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 23-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 LT40_RS09510 17a22cb365c89ffc5c0c8e6a1a1b2d0e 272 SUPERFAMILY SSF56219 1 269 2.09E-83 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS09510 17a22cb365c89ffc5c0c8e6a1a1b2d0e 272 PANTHER PTHR22748:SF7 1 269 2.1E-127 T 23-04-2016 LT40_RS09510 17a22cb365c89ffc5c0c8e6a1a1b2d0e 272 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 262 4.0E-28 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS09510 17a22cb365c89ffc5c0c8e6a1a1b2d0e 272 PANTHER PTHR22748 1 269 2.1E-127 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 LT40_RS01000 17f7a8695f4f5c6f4f3e1abff3e615fa 403 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 20 400 1.3E-183 T 23-04-2016 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 UniPathway: UPA00051 LT40_RS01000 17f7a8695f4f5c6f4f3e1abff3e615fa 403 SUPERFAMILY SSF53383 35 401 8.97E-121 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS01000 17f7a8695f4f5c6f4f3e1abff3e615fa 403 PANTHER PTHR11808 1 403 1.8E-221 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LT40_RS01000 17f7a8695f4f5c6f4f3e1abff3e615fa 403 Gene3D G3DSA:3.40.640.10 18 266 8.2E-92 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS01000 17f7a8695f4f5c6f4f3e1abff3e615fa 403 PANTHER PTHR11808:SF36 1 403 1.8E-221 T 23-04-2016 LT40_RS01000 17f7a8695f4f5c6f4f3e1abff3e615fa 403 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 20 400 3.8E-140 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LT40_RS01000 17f7a8695f4f5c6f4f3e1abff3e615fa 403 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 211 225 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LT40_RS01000 17f7a8695f4f5c6f4f3e1abff3e615fa 403 PIRSF PIRSF001434 8 403 5.6E-135 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 LT40_RS01000 17f7a8695f4f5c6f4f3e1abff3e615fa 403 Gene3D G3DSA:3.90.1150.10 268 402 2.4E-50 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS14485 4fef5b7dffb331d7b515927583b92ec1 84 Gene3D G3DSA:3.40.30.10 2 83 1.2E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS14485 4fef5b7dffb331d7b515927583b92ec1 84 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 23-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 LT40_RS14485 4fef5b7dffb331d7b515927583b92ec1 84 Pfam PF00462 Glutaredoxin 4 63 6.1E-20 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 LT40_RS14485 4fef5b7dffb331d7b515927583b92ec1 84 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 7.4E-36 T 23-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 LT40_RS14485 4fef5b7dffb331d7b515927583b92ec1 84 SUPERFAMILY SSF52833 1 83 8.66E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS14485 4fef5b7dffb331d7b515927583b92ec1 84 PANTHER PTHR10168 4 84 1.2E-23 T 23-04-2016 LT40_RS14485 4fef5b7dffb331d7b515927583b92ec1 84 PRINTS PR00160 Glutaredoxin signature 4 22 4.2E-14 T 23-04-2016 IPR014025 Glutaredoxin subgroup LT40_RS14485 4fef5b7dffb331d7b515927583b92ec1 84 PRINTS PR00160 Glutaredoxin signature 46 59 4.2E-14 T 23-04-2016 IPR014025 Glutaredoxin subgroup LT40_RS14485 4fef5b7dffb331d7b515927583b92ec1 84 PRINTS PR00160 Glutaredoxin signature 60 73 4.2E-14 T 23-04-2016 IPR014025 Glutaredoxin subgroup LT40_RS00500 fb9993de5bbb25686a2b425babbc3818 543 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.031 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LT40_RS00500 fb9993de5bbb25686a2b425babbc3818 543 Pfam PF00117 Glutamine amidotransferase class-I 300 534 1.7E-59 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LT40_RS00500 fb9993de5bbb25686a2b425babbc3818 543 SUPERFAMILY SSF52317 287 541 2.9E-89 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS00500 fb9993de5bbb25686a2b425babbc3818 543 Gene3D G3DSA:3.40.50.300 1 280 4.1E-133 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00500 fb9993de5bbb25686a2b425babbc3818 543 SUPERFAMILY SSF52540 1 266 4.18E-121 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00500 fb9993de5bbb25686a2b425babbc3818 543 Pfam PF06418 CTP synthase N-terminus 3 265 2.8E-125 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LT40_RS00500 fb9993de5bbb25686a2b425babbc3818 543 PANTHER PTHR11550 1 538 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LT40_RS00500 fb9993de5bbb25686a2b425babbc3818 543 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 1.2E-252 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 LT40_RS00500 fb9993de5bbb25686a2b425babbc3818 543 Gene3D G3DSA:3.40.50.880 286 540 1.2E-99 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS16555 bfc4f13f145863700f55b57fb1489202 51 SUPERFAMILY SSF57829 1 49 2.56E-18 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 LT40_RS16555 bfc4f13f145863700f55b57fb1489202 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.722 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS16555 bfc4f13f145863700f55b57fb1489202 51 PANTHER PTHR15238 1 51 6.5E-23 T 23-04-2016 LT40_RS16555 bfc4f13f145863700f55b57fb1489202 51 Pfam PF00471 Ribosomal protein L33 4 49 4.7E-17 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS16555 bfc4f13f145863700f55b57fb1489202 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 51 3.2E-24 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS16555 bfc4f13f145863700f55b57fb1489202 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13010 98ea05ff482294eeeccaab47a0898216 160 Pfam PF01668 SmpB protein 11 74 7.2E-29 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 LT40_RS13010 98ea05ff482294eeeccaab47a0898216 160 ProSitePatterns PS01317 SsrA-binding protein. 30 42 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site LT40_RS13010 98ea05ff482294eeeccaab47a0898216 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 70.096 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 LT40_RS13010 98ea05ff482294eeeccaab47a0898216 160 Gene3D G3DSA:2.40.280.10 11 131 8.3E-49 T 23-04-2016 IPR023620 Small protein B LT40_RS13010 98ea05ff482294eeeccaab47a0898216 160 PANTHER PTHR30308:SF2 1 159 2.7E-77 T 23-04-2016 LT40_RS13010 98ea05ff482294eeeccaab47a0898216 160 SUPERFAMILY SSF74982 6 136 2.22E-49 T 23-04-2016 IPR023620 Small protein B LT40_RS13010 98ea05ff482294eeeccaab47a0898216 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 136 4.0E-56 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 LT40_RS13010 98ea05ff482294eeeccaab47a0898216 160 PANTHER PTHR30308 1 159 2.7E-77 T 23-04-2016 LT40_RS13010 98ea05ff482294eeeccaab47a0898216 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 12 153 3.1E-52 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 LT40_RS13065 692c60853aa6124d6632b5d8e76758af 731 PANTHER PTHR32552:SF14 62 731 2.3E-194 T 23-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LT40_RS13065 692c60853aa6124d6632b5d8e76758af 731 SUPERFAMILY SSF56935 65 731 4.88E-97 T 23-04-2016 LT40_RS13065 692c60853aa6124d6632b5d8e76758af 731 Gene3D G3DSA:2.40.170.20 191 731 2.2E-97 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS13065 692c60853aa6124d6632b5d8e76758af 731 Pfam PF00593 TonB dependent receptor 489 726 2.6E-20 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS13065 692c60853aa6124d6632b5d8e76758af 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 163 9.7E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS13065 692c60853aa6124d6632b5d8e76758af 731 PANTHER PTHR32552 62 731 2.3E-194 T 23-04-2016 LT40_RS13065 692c60853aa6124d6632b5d8e76758af 731 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 72 731 2.8E-112 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS13065 692c60853aa6124d6632b5d8e76758af 731 Gene3D G3DSA:2.170.130.10 65 184 8.4E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS13065 692c60853aa6124d6632b5d8e76758af 731 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 714 731 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site LT40_RS09405 6589b709b9211f1234d4730ea36b438d 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 250 1.7E-73 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LT40_RS09405 6589b709b9211f1234d4730ea36b438d 489 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 375 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LT40_RS09405 6589b709b9211f1234d4730ea36b438d 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 441 4.0E-24 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LT40_RS09405 6589b709b9211f1234d4730ea36b438d 489 PANTHER PTHR10196 1 485 2.8E-162 T 23-04-2016 LT40_RS09405 6589b709b9211f1234d4730ea36b438d 489 Gene3D G3DSA:3.30.420.40 254 486 2.6E-39 T 23-04-2016 LT40_RS09405 6589b709b9211f1234d4730ea36b438d 489 TIGRFAM TIGR01312 XylB: xylulokinase 3 486 1.8E-180 T 23-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 LT40_RS09405 6589b709b9211f1234d4730ea36b438d 489 PANTHER PTHR10196:SF67 1 485 2.8E-162 T 23-04-2016 LT40_RS09405 6589b709b9211f1234d4730ea36b438d 489 SUPERFAMILY SSF53067 254 486 6.58E-50 T 23-04-2016 LT40_RS09405 6589b709b9211f1234d4730ea36b438d 489 Gene3D G3DSA:3.30.420.40 1 251 3.5E-59 T 23-04-2016 LT40_RS09405 6589b709b9211f1234d4730ea36b438d 489 SUPERFAMILY SSF53067 2 251 2.37E-65 T 23-04-2016 LT40_RS09405 6589b709b9211f1234d4730ea36b438d 489 PIRSF PIRSF000538 1 489 1.3E-118 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LT40_RS14125 dc61cb38c406ccf6ead0ce7949c14692 87 PANTHER PTHR37550:SF3 1 82 4.6E-18 T 23-04-2016 LT40_RS14125 dc61cb38c406ccf6ead0ce7949c14692 87 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 53 5.4E-8 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 LT40_RS14125 dc61cb38c406ccf6ead0ce7949c14692 87 SUPERFAMILY SSF89447 4 55 5.75E-7 T 23-04-2016 LT40_RS14125 dc61cb38c406ccf6ead0ce7949c14692 87 PANTHER PTHR37550 1 82 4.6E-18 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 Gene3D G3DSA:1.20.1640.10 289 497 5.3E-54 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 Gene3D G3DSA:3.30.70.1430 45 146 9.1E-27 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 Gene3D G3DSA:1.10.3850.10 797 1014 1.0E-56 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 Gene3D G3DSA:3.30.2090.10 707 788 6.6E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 Gene3D G3DSA:3.30.2090.10 187 269 7.0E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 SUPERFAMILY SSF82866 294 495 5.23E-46 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 2.2E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.2E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 2.2E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 2.2E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 2.2E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 2.2E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 2.2E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 2.2E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 2.2E-65 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 PANTHER PTHR32063:SF30 5 1021 0.0 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 Gene3D G3DSA:3.30.70.1430 556 642 7.7E-5 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 SUPERFAMILY SSF82693 272 328 3.09E-20 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 PANTHER PTHR32063 5 1021 0.0 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 SUPERFAMILY SSF82693 45 129 7.5E-21 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 SUPERFAMILY SSF82693 139 186 3.09E-20 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 SUPERFAMILY SSF82866 791 1015 6.8E-47 T 23-04-2016 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 Pfam PF00873 AcrB/AcrD/AcrF family 10 1011 4.7E-296 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 SUPERFAMILY SSF82714 187 270 7.98E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 SUPERFAMILY SSF82714 707 789 1.44E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS03285 5a311d8e8082b9a102059170cde40eef 1031 SUPERFAMILY SSF82693 553 646 1.78E-10 T 23-04-2016 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 Pfam PF00164 Ribosomal protein S12/S23 9 123 2.3E-42 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 PIRSF PIRSF002133 1 123 1.4E-52 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.4E-59 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 SUPERFAMILY SSF50249 3 123 7.42E-51 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 PANTHER PTHR11652 1 116 2.6E-73 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.5E-69 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 Gene3D G3DSA:2.40.50.140 1 123 2.4E-64 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS18330 e8ed6cbe8f8c36a880a1d7e4c00007fe 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.726 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 LT40_RS07755 c58de979a07528bd0747792a59ea2658 218 PANTHER PTHR30587:SF2 1 218 4.9E-101 T 23-04-2016 LT40_RS07755 c58de979a07528bd0747792a59ea2658 218 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 193 205 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS07755 c58de979a07528bd0747792a59ea2658 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 12 31 1.8E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS07755 c58de979a07528bd0747792a59ea2658 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 51 70 1.8E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS07755 c58de979a07528bd0747792a59ea2658 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 145 165 1.8E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS07755 c58de979a07528bd0747792a59ea2658 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 190 215 1.8E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS07755 c58de979a07528bd0747792a59ea2658 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 31 51 1.8E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS07755 c58de979a07528bd0747792a59ea2658 218 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 166 187 1.8E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS07755 c58de979a07528bd0747792a59ea2658 218 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 11 212 5.8E-81 T 23-04-2016 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 LT40_RS07755 c58de979a07528bd0747792a59ea2658 218 PANTHER PTHR30587 1 218 4.9E-101 T 23-04-2016 LT40_RS07755 c58de979a07528bd0747792a59ea2658 218 Pfam PF00813 FliP family 15 212 4.7E-63 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS10590 54d82eeb8dca6aafc2d3b18acdc7675e 708 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 691 708 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site LT40_RS10590 54d82eeb8dca6aafc2d3b18acdc7675e 708 Gene3D G3DSA:2.40.170.20 187 708 3.1E-151 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS10590 54d82eeb8dca6aafc2d3b18acdc7675e 708 Pfam PF00593 TonB dependent receptor 474 707 1.5E-33 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS10590 54d82eeb8dca6aafc2d3b18acdc7675e 708 SUPERFAMILY SSF56935 28 708 1.88E-133 T 23-04-2016 LT40_RS10590 54d82eeb8dca6aafc2d3b18acdc7675e 708 PANTHER PTHR32552:SF29 60 708 1.4E-178 T 23-04-2016 LT40_RS10590 54d82eeb8dca6aafc2d3b18acdc7675e 708 PANTHER PTHR32552:SF29 10 37 1.4E-178 T 23-04-2016 LT40_RS10590 54d82eeb8dca6aafc2d3b18acdc7675e 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 167 7.4E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS10590 54d82eeb8dca6aafc2d3b18acdc7675e 708 Gene3D G3DSA:2.170.130.10 50 174 1.9E-34 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS10590 54d82eeb8dca6aafc2d3b18acdc7675e 708 PANTHER PTHR32552 60 708 1.4E-178 T 23-04-2016 LT40_RS10590 54d82eeb8dca6aafc2d3b18acdc7675e 708 PANTHER PTHR32552 10 37 1.4E-178 T 23-04-2016 LT40_RS10590 54d82eeb8dca6aafc2d3b18acdc7675e 708 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 708 6.2E-103 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS11065 4fa2ec7ad03c8f0c88664c06e7184ae9 335 SUPERFAMILY SSF56645 25 186 4.06E-19 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS11065 4fa2ec7ad03c8f0c88664c06e7184ae9 335 Gene3D G3DSA:2.40.110.10 102 177 6.8E-13 T 23-04-2016 LT40_RS11065 4fa2ec7ad03c8f0c88664c06e7184ae9 335 SUPERFAMILY SSF47203 193 308 1.62E-5 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS11065 4fa2ec7ad03c8f0c88664c06e7184ae9 335 Gene3D G3DSA:1.20.140.10 198 307 1.0E-4 T 23-04-2016 LT40_RS06400 7fd4af30221e5ea071fb17aafa0a9de1 327 PIRSF PIRSF006470 1 327 2.0E-100 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 LT40_RS06400 7fd4af30221e5ea071fb17aafa0a9de1 327 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 285 1.2E-64 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 LT40_RS06400 7fd4af30221e5ea071fb17aafa0a9de1 327 PANTHER PTHR33376 1 324 3.0E-108 T 23-04-2016 LT40_RS06400 7fd4af30221e5ea071fb17aafa0a9de1 327 PANTHER PTHR33376:SF6 1 324 3.0E-108 T 23-04-2016 LT40_RS06400 7fd4af30221e5ea071fb17aafa0a9de1 327 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 311 5.3E-79 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 ProSitePatterns PS00438 Catalase proximal active site signature. 52 68 - T 23-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 SUPERFAMILY SSF56634 13 484 3.4E-187 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 PANTHER PTHR11465:SF3 8 475 0.0 T 23-04-2016 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 PANTHER PTHR11465 8 475 0.0 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 Pfam PF00199 Catalase 16 392 2.5E-162 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 Gene3D G3DSA:2.40.180.10 12 363 2.6E-163 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 Pfam PF06628 Catalase-related immune-responsive 418 477 2.0E-16 T 23-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 339 347 - T 23-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 PRINTS PR00067 Catalase signature 112 129 5.9E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 PRINTS PR00067 Catalase signature 326 352 5.9E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 PRINTS PR00067 Catalase signature 294 321 5.9E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 PRINTS PR00067 Catalase signature 131 149 5.9E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 PRINTS PR00067 Catalase signature 91 109 5.9E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 PRINTS PR00067 Catalase signature 29 52 5.9E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 SMART SM01060 16 396 4.3E-237 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS00050 78a0583261280288da40cc6c133a626d 495 PIRSF PIRSF038928 7 485 4.9E-175 T 23-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18065 881c9f9dc7c29af02f637da65da1ddd5 106 Gene3D G3DSA:3.40.250.10 2 101 2.5E-27 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS18065 881c9f9dc7c29af02f637da65da1ddd5 106 SUPERFAMILY SSF52821 2 99 4.06E-26 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS18065 881c9f9dc7c29af02f637da65da1ddd5 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 29.605 T 23-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 LT40_RS18065 881c9f9dc7c29af02f637da65da1ddd5 106 SMART SM00450 7 101 4.1E-18 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS18065 881c9f9dc7c29af02f637da65da1ddd5 106 Pfam PF00581 Rhodanese-like domain 10 97 1.0E-14 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS01850 8a20f56182daa418021e66a25d0b427e 93 Pfam PF14542 GCN5-related N-acetyl-transferase 15 88 7.8E-25 T 23-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase LT40_RS01850 8a20f56182daa418021e66a25d0b427e 93 Gene3D G3DSA:3.40.630.30 2 89 4.4E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS01850 8a20f56182daa418021e66a25d0b427e 93 SUPERFAMILY SSF55729 6 88 1.53E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS01850 8a20f56182daa418021e66a25d0b427e 93 PANTHER PTHR31435:SF3 2 87 6.2E-41 T 23-04-2016 LT40_RS01850 8a20f56182daa418021e66a25d0b427e 93 PANTHER PTHR31435 2 87 6.2E-41 T 23-04-2016 LT40_RS07405 4c9710579b10cdf283894e13c6d8384e 375 Gene3D G3DSA:1.20.1250.20 191 364 1.3E-8 T 23-04-2016 LT40_RS07405 4c9710579b10cdf283894e13c6d8384e 375 Gene3D G3DSA:1.20.1250.20 3 169 1.3E-24 T 23-04-2016 LT40_RS07405 4c9710579b10cdf283894e13c6d8384e 375 Pfam PF07690 Major Facilitator Superfamily 5 329 1.7E-30 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS07405 4c9710579b10cdf283894e13c6d8384e 375 PANTHER PTHR23501 1 372 5.4E-20 T 23-04-2016 LT40_RS07405 4c9710579b10cdf283894e13c6d8384e 375 SUPERFAMILY SSF103473 3 366 7.85E-41 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS16925 c71a066289214eadad73ce1472888ec2 185 SUPERFAMILY SSF101327 7 170 7.19E-42 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 LT40_RS16925 c71a066289214eadad73ce1472888ec2 185 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 170 1.5E-31 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 LT40_RS16925 c71a066289214eadad73ce1472888ec2 185 PANTHER PTHR37528 1 185 2.6E-30 T 23-04-2016 LT40_RS16925 c71a066289214eadad73ce1472888ec2 185 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 4 183 28.737 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 LT40_RS14645 4ec5eb98f2472a01fad865311ed2c72e 264 PANTHER PTHR34266:SF2 4 263 1.5E-152 T 23-04-2016 LT40_RS14645 4ec5eb98f2472a01fad865311ed2c72e 264 Gene3D G3DSA:3.20.20.70 18 239 2.6E-51 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS14645 4ec5eb98f2472a01fad865311ed2c72e 264 SUPERFAMILY SSF110399 9 250 5.1E-89 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 LT40_RS14645 4ec5eb98f2472a01fad865311ed2c72e 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 12 258 4.1E-110 T 23-04-2016 LT40_RS14645 4ec5eb98f2472a01fad865311ed2c72e 264 PANTHER PTHR34266 4 263 1.5E-152 T 23-04-2016 LT40_RS14645 4ec5eb98f2472a01fad865311ed2c72e 264 Hamap MF_00443 Thiazole synthase [thiG]. 9 264 42.492 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 LT40_RS06845 e64697da9b362e1dd6eb5a3e06d0559b 354 Gene3D G3DSA:3.40.50.150 179 273 7.2E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS06845 e64697da9b362e1dd6eb5a3e06d0559b 354 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 349 76.974 T 23-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 LT40_RS06845 e64697da9b362e1dd6eb5a3e06d0559b 354 SUPERFAMILY SSF53335 180 274 1.44E-13 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS06845 e64697da9b362e1dd6eb5a3e06d0559b 354 PANTHER PTHR37524 1 354 8.8E-161 T 23-04-2016 LT40_RS06845 e64697da9b362e1dd6eb5a3e06d0559b 354 PIRSF PIRSF028774 1 353 7.9E-158 T 23-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 LT40_RS06845 e64697da9b362e1dd6eb5a3e06d0559b 354 Pfam PF01728 FtsJ-like methyltransferase 181 273 1.5E-7 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 LT40_RS06845 e64697da9b362e1dd6eb5a3e06d0559b 354 PANTHER PTHR37524:SF2 1 354 8.8E-161 T 23-04-2016 LT40_RS19155 a37327859d527b0147825de4c64836ca 410 PANTHER PTHR11706:SF2 12 216 1.6E-70 T 23-04-2016 LT40_RS19155 a37327859d527b0147825de4c64836ca 410 Pfam PF01566 Natural resistance-associated macrophage protein 41 375 2.1E-20 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LT40_RS19155 a37327859d527b0147825de4c64836ca 410 PANTHER PTHR11706 12 216 1.6E-70 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LT40_RS20285 bedb53320daa55cf3c12f1ba62fb8b4b 478 SMART SM00912 51 171 9.2E-37 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS20285 bedb53320daa55cf3c12f1ba62fb8b4b 478 PANTHER PTHR32093 54 168 1.5E-35 T 23-04-2016 LT40_RS20285 bedb53320daa55cf3c12f1ba62fb8b4b 478 Pfam PF05860 haemagglutination activity domain 49 168 4.8E-27 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS20285 bedb53320daa55cf3c12f1ba62fb8b4b 478 SUPERFAMILY SSF51126 329 341 8.47E-45 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor LT40_RS20285 bedb53320daa55cf3c12f1ba62fb8b4b 478 SUPERFAMILY SSF51126 48 295 8.47E-45 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor LT40_RS20285 bedb53320daa55cf3c12f1ba62fb8b4b 478 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 69 164 9.2E-15 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS20285 bedb53320daa55cf3c12f1ba62fb8b4b 478 Gene3D G3DSA:2.160.20.10 328 359 3.4E-63 T 23-04-2016 IPR012334 Pectin lyase fold LT40_RS20285 bedb53320daa55cf3c12f1ba62fb8b4b 478 Gene3D G3DSA:2.160.20.10 49 294 3.4E-63 T 23-04-2016 IPR012334 Pectin lyase fold LT40_RS12015 030cfb2303f93e51ca7e233f4659f2a6 459 Pfam PF00474 Sodium:solute symporter family 32 412 4.1E-37 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS12015 030cfb2303f93e51ca7e233f4659f2a6 459 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 394 414 - T 23-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LT40_RS12015 030cfb2303f93e51ca7e233f4659f2a6 459 PANTHER PTHR11819:SF141 1 453 7.5E-166 T 23-04-2016 LT40_RS12015 030cfb2303f93e51ca7e233f4659f2a6 459 PANTHER PTHR11819 1 453 7.5E-166 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS11495 e06e40f8848b352a0ef1be9f4523bc41 104 Gene3D G3DSA:1.10.260.40 8 68 3.5E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS11495 e06e40f8848b352a0ef1be9f4523bc41 104 SMART SM00530 18 71 4.9E-9 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS11495 e06e40f8848b352a0ef1be9f4523bc41 104 SUPERFAMILY SSF47413 9 68 5.07E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS11495 e06e40f8848b352a0ef1be9f4523bc41 104 Pfam PF01381 Helix-turn-helix 19 67 2.8E-10 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS02500 b99c455ed3b9e924b2a1c26c3dea4d9e 277 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 8 247 1.4E-24 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein LT40_RS02500 b99c455ed3b9e924b2a1c26c3dea4d9e 277 Gene3D G3DSA:3.40.50.300 9 269 7.6E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02500 b99c455ed3b9e924b2a1c26c3dea4d9e 277 PIRSF PIRSF003092 3 273 3.5E-82 T 23-04-2016 IPR025501 ATP binding protein MinD LT40_RS02500 b99c455ed3b9e924b2a1c26c3dea4d9e 277 PANTHER PTHR13696:SF3 1 259 2.2E-118 T 23-04-2016 LT40_RS02500 b99c455ed3b9e924b2a1c26c3dea4d9e 277 SUPERFAMILY SSF52540 8 268 4.56E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02500 b99c455ed3b9e924b2a1c26c3dea4d9e 277 PANTHER PTHR13696 1 259 2.2E-118 T 23-04-2016 LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 Gene3D G3DSA:3.40.50.720 191 310 2.9E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 PANTHER PTHR11695 129 370 2.3E-209 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 PANTHER PTHR11695 16 109 2.3E-209 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 SUPERFAMILY SSF50129 2 188 6.49E-71 T 23-04-2016 IPR011032 GroES-like LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 Gene3D G3DSA:3.90.180.10 2 190 1.3E-67 T 23-04-2016 IPR011032 GroES-like LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 Pfam PF00107 Zinc-binding dehydrogenase 198 325 7.7E-24 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 SUPERFAMILY SSF51735 161 334 5.01E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 370 1.1E-218 T 23-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 PANTHER PTHR11695:SF560 129 370 2.3E-209 T 23-04-2016 LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 PANTHER PTHR11695:SF560 16 109 2.3E-209 T 23-04-2016 LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 SUPERFAMILY SSF50129 320 370 8.0E-11 T 23-04-2016 IPR011032 GroES-like LT40_RS00530 ab414a7cec248d03e0561743e6871253 370 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 155 2.3E-23 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LT40_RS04125 591341e6b746d18954541b327089ab15 159 Gene3D G3DSA:3.30.70.860 93 159 7.5E-34 T 23-04-2016 LT40_RS04125 591341e6b746d18954541b327089ab15 159 PANTHER PTHR30476 1 159 3.7E-85 T 23-04-2016 LT40_RS04125 591341e6b746d18954541b327089ab15 159 SUPERFAMILY SSF89963 87 159 3.4E-28 T 23-04-2016 IPR007551 Protein of unknown function DUF520 LT40_RS04125 591341e6b746d18954541b327089ab15 159 Gene3D G3DSA:3.30.70.990 9 92 7.1E-26 T 23-04-2016 LT40_RS04125 591341e6b746d18954541b327089ab15 159 Pfam PF04461 Protein of unknown function (DUF520) 2 158 1.3E-60 T 23-04-2016 IPR007551 Protein of unknown function DUF520 LT40_RS04125 591341e6b746d18954541b327089ab15 159 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 159 27.433 T 23-04-2016 IPR007551 Protein of unknown function DUF520 LT40_RS04125 591341e6b746d18954541b327089ab15 159 SUPERFAMILY SSF89963 2 85 7.59E-25 T 23-04-2016 IPR007551 Protein of unknown function DUF520 LT40_RS04125 591341e6b746d18954541b327089ab15 159 PANTHER PTHR30476:SF0 1 159 3.7E-85 T 23-04-2016 LT40_RS20005 eeee2c6dec173524ec7df01a2e404d52 161 PANTHER PTHR10516 130 161 5.6E-40 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LT40_RS20005 eeee2c6dec173524ec7df01a2e404d52 161 PANTHER PTHR10516 3 74 5.6E-40 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LT40_RS20005 eeee2c6dec173524ec7df01a2e404d52 161 Gene3D G3DSA:3.10.50.40 4 69 2.8E-18 T 23-04-2016 LT40_RS20005 eeee2c6dec173524ec7df01a2e404d52 161 Gene3D G3DSA:3.10.50.40 123 141 2.8E-18 T 23-04-2016 LT40_RS20005 eeee2c6dec173524ec7df01a2e404d52 161 PANTHER PTHR10516:SF316 130 161 5.6E-40 T 23-04-2016 LT40_RS20005 eeee2c6dec173524ec7df01a2e404d52 161 PANTHER PTHR10516:SF316 3 74 5.6E-40 T 23-04-2016 LT40_RS20005 eeee2c6dec173524ec7df01a2e404d52 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 137 3.8E-11 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LT40_RS20005 eeee2c6dec173524ec7df01a2e404d52 161 SUPERFAMILY SSF54534 3 141 6.68E-36 T 23-04-2016 LT40_RS09665 91067ddeeedfa3a2b13f215da2029cea 376 SUPERFAMILY SSF51004 21 250 1.39E-38 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain LT40_RS09665 91067ddeeedfa3a2b13f215da2029cea 376 SUPERFAMILY SSF51004 278 347 1.39E-38 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain LT40_RS09665 91067ddeeedfa3a2b13f215da2029cea 376 Gene3D G3DSA:2.130.10.10 22 370 6.3E-81 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LT40_RS09665 91067ddeeedfa3a2b13f215da2029cea 376 PANTHER PTHR30344:SF1 269 376 1.6E-68 T 23-04-2016 LT40_RS09665 91067ddeeedfa3a2b13f215da2029cea 376 PANTHER PTHR30344:SF1 22 249 1.6E-68 T 23-04-2016 LT40_RS09665 91067ddeeedfa3a2b13f215da2029cea 376 PANTHER PTHR30344 269 376 1.6E-68 T 23-04-2016 LT40_RS09665 91067ddeeedfa3a2b13f215da2029cea 376 PANTHER PTHR30344 22 249 1.6E-68 T 23-04-2016 LT40_RS09665 91067ddeeedfa3a2b13f215da2029cea 376 Pfam PF10282 Lactonase, 7-bladed beta-propeller 24 369 1.3E-78 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 LT40_RS20245 d508560a272c8bd83775a366f408761b 123 PANTHER PTHR35796 18 122 1.5E-22 T 23-04-2016 LT40_RS20245 d508560a272c8bd83775a366f408761b 123 SUPERFAMILY SSF50729 14 122 1.11E-34 T 23-04-2016 IPR011993 PH domain-like LT40_RS20245 d508560a272c8bd83775a366f408761b 123 Gene3D G3DSA:2.30.29.50 11 96 1.6E-31 T 23-04-2016 IPR012544 Bacterial Pleckstrin homology domain LT40_RS20245 d508560a272c8bd83775a366f408761b 123 Pfam PF08000 Bacterial PH domain 11 120 2.1E-34 T 23-04-2016 IPR012544 Bacterial Pleckstrin homology domain LT40_RS13315 bb85cfec04476ea828ca489ad098bdef 397 PANTHER PTHR23502:SF19 5 383 4.5E-128 T 23-04-2016 LT40_RS13315 bb85cfec04476ea828ca489ad098bdef 397 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 380 1.6E-86 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 LT40_RS13315 bb85cfec04476ea828ca489ad098bdef 397 Gene3D G3DSA:1.20.1250.20 4 182 1.3E-26 T 23-04-2016 LT40_RS13315 bb85cfec04476ea828ca489ad098bdef 397 Gene3D G3DSA:1.20.1250.20 205 384 9.6E-7 T 23-04-2016 LT40_RS13315 bb85cfec04476ea828ca489ad098bdef 397 SUPERFAMILY SSF103473 4 387 1.26E-58 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS13315 bb85cfec04476ea828ca489ad098bdef 397 Pfam PF07690 Major Facilitator Superfamily 13 349 3.2E-37 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS13315 bb85cfec04476ea828ca489ad098bdef 397 PANTHER PTHR23502 5 383 4.5E-128 T 23-04-2016 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 SUPERFAMILY SSF46911 3 74 6.41E-27 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 Pfam PF01084 Ribosomal protein S18 19 68 1.5E-24 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.4E-34 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 4.2E-16 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 4.2E-16 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 4.2E-16 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 4.2E-16 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 19.811 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 23-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 Gene3D G3DSA:4.10.640.10 8 74 1.4E-30 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 PANTHER PTHR13479 2 76 2.0E-28 T 23-04-2016 LT40_RS13740 2880bb4b72d2105d55f0c5400230af30 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 7.0E-22 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS14740 9977ac903817fcb4111e9b6dadbb123a 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.7E-23 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS14740 9977ac903817fcb4111e9b6dadbb123a 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.7E-23 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS14740 9977ac903817fcb4111e9b6dadbb123a 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.7E-23 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS14740 9977ac903817fcb4111e9b6dadbb123a 463 PRINTS PR00173 Glutamate-aspartate symporter signature 233 252 1.7E-23 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS14740 9977ac903817fcb4111e9b6dadbb123a 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.7E-23 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS14740 9977ac903817fcb4111e9b6dadbb123a 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.7E-23 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS14740 9977ac903817fcb4111e9b6dadbb123a 463 PANTHER PTHR11958 1 456 1.3E-244 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS14740 9977ac903817fcb4111e9b6dadbb123a 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 442 7.4E-104 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS14740 9977ac903817fcb4111e9b6dadbb123a 463 PANTHER PTHR11958:SF5 1 456 1.3E-244 T 23-04-2016 LT40_RS14740 9977ac903817fcb4111e9b6dadbb123a 463 SUPERFAMILY SSF118215 29 441 2.88E-96 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS14740 9977ac903817fcb4111e9b6dadbb123a 463 Gene3D G3DSA:1.10.3860.10 24 449 3.3E-101 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS16000 8de529e699dc2913bded88925aa2a7a4 173 PANTHER PTHR23133:SF7 1 170 4.2E-86 T 23-04-2016 LT40_RS16000 8de529e699dc2913bded88925aa2a7a4 173 PANTHER PTHR23133 1 170 4.2E-86 T 23-04-2016 LT40_RS16000 8de529e699dc2913bded88925aa2a7a4 173 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 1 141 1.3E-41 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 LT40_RS16000 8de529e699dc2913bded88925aa2a7a4 173 SUPERFAMILY SSF56784 2 170 1.25E-43 T 23-04-2016 IPR023214 HAD-like domain LT40_RS16000 8de529e699dc2913bded88925aa2a7a4 173 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 1 142 3.2E-32 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LT40_RS16000 8de529e699dc2913bded88925aa2a7a4 173 Pfam PF13242 HAD-hyrolase-like 95 164 5.4E-11 T 23-04-2016 LT40_RS16000 8de529e699dc2913bded88925aa2a7a4 173 PIRSF PIRSF004682 1 170 1.8E-52 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 LT40_RS16000 8de529e699dc2913bded88925aa2a7a4 173 Gene3D G3DSA:3.40.50.1000 2 170 7.1E-50 T 23-04-2016 IPR023214 HAD-like domain LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 SUPERFAMILY SSF88946 12 93 4.06E-24 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 Gene3D G3DSA:1.10.10.10 95 138 3.7E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 Pfam PF04542 Sigma-70 region 2 21 93 5.4E-17 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 Pfam PF04539 Sigma-70 region 3 102 168 2.0E-12 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 SUPERFAMILY SSF88659 169 244 2.43E-19 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 Pfam PF04545 Sigma-70, region 4 190 238 6.6E-18 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 PIRSF PIRSF000770 3 245 1.2E-35 T 23-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 PANTHER PTHR30385:SF7 20 247 4.6E-73 T 23-04-2016 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 21 241 6.9E-83 T 23-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 PANTHER PTHR30385 20 247 4.6E-73 T 23-04-2016 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 244 67.232 T 23-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 SUPERFAMILY SSF88659 95 163 1.96E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 Gene3D G3DSA:1.10.10.10 178 243 1.8E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 Gene3D G3DSA:1.10.601.10 18 85 5.9E-16 T 23-04-2016 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 PRINTS PR00046 Major sigma-70 factor signature 48 61 1.2E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 PRINTS PR00046 Major sigma-70 factor signature 226 237 1.2E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 PRINTS PR00046 Major sigma-70 factor signature 211 226 1.2E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 PRINTS PR00046 Major sigma-70 factor signature 194 206 1.2E-10 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS02505 fd6471acb45f86ae9107686e4460db41 247 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 240 7.8E-35 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 PANTHER PTHR11451:SF3 397 571 3.9E-157 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 PANTHER PTHR11451:SF3 4 244 3.9E-157 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 SUPERFAMILY SSF52954 462 569 5.29E-26 T 23-04-2016 IPR004154 Anticodon-binding LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 Gene3D G3DSA:3.40.50.800 469 569 8.1E-27 T 23-04-2016 IPR004154 Anticodon-binding LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 566 1.3E-244 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.7E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.7E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.7E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.7E-18 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 SUPERFAMILY SSF55826 218 388 1.44E-31 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 Pfam PF03129 Anticodon binding domain 473 567 3.9E-15 T 23-04-2016 IPR004154 Anticodon-binding LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 Gene3D G3DSA:3.90.960.10 254 386 5.6E-31 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 PANTHER PTHR11451 397 571 3.9E-157 T 23-04-2016 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 PANTHER PTHR11451 4 244 3.9E-157 T 23-04-2016 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 Gene3D G3DSA:3.30.930.10 405 465 5.7E-105 T 23-04-2016 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 Gene3D G3DSA:3.30.930.10 1 228 5.7E-105 T 23-04-2016 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 2.7E-50 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 375 9.0E-26 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 570 41.756 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 SUPERFAMILY SSF55681 405 476 3.38E-106 T 23-04-2016 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 SUPERFAMILY SSF55681 10 237 3.38E-106 T 23-04-2016 LT40_RS04895 8cbecf4d4ddf723769d5c605c3cdd79b 571 PIRSF PIRSF001535 1 571 2.0E-268 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LT40_RS18705 2e561fcec0c14c81de18f21ee298306a 498 Gene3D G3DSA:3.40.640.10 185 387 1.3E-46 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS18705 2e561fcec0c14c81de18f21ee298306a 498 SUPERFAMILY SSF53383 140 496 5.8E-74 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS18705 2e561fcec0c14c81de18f21ee298306a 498 SMART SM00345 20 79 1.5E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS18705 2e561fcec0c14c81de18f21ee298306a 498 PANTHER PTHR11751 140 496 1.5E-69 T 23-04-2016 LT40_RS18705 2e561fcec0c14c81de18f21ee298306a 498 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 1.8E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS18705 2e561fcec0c14c81de18f21ee298306a 498 Gene3D G3DSA:1.10.10.10 8 78 2.1E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18705 2e561fcec0c14c81de18f21ee298306a 498 SUPERFAMILY SSF46785 9 80 1.3E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18705 2e561fcec0c14c81de18f21ee298306a 498 Pfam PF00155 Aminotransferase class I and II 203 437 1.2E-13 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS18705 2e561fcec0c14c81de18f21ee298306a 498 PANTHER PTHR11751:SF10 140 496 1.5E-69 T 23-04-2016 LT40_RS18895 a4cef10ca4c797cddb0e8596b5607b9b 335 SUPERFAMILY SSF52540 78 288 1.1E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18895 a4cef10ca4c797cddb0e8596b5607b9b 335 PANTHER PTHR30473 2 335 6.8E-175 T 23-04-2016 LT40_RS18895 a4cef10ca4c797cddb0e8596b5607b9b 335 PANTHER PTHR30473:SF1 2 335 6.8E-175 T 23-04-2016 LT40_RS18895 a4cef10ca4c797cddb0e8596b5607b9b 335 Pfam PF02562 PhoH-like protein 113 316 1.9E-94 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 LT40_RS18895 a4cef10ca4c797cddb0e8596b5607b9b 335 Gene3D G3DSA:3.40.50.300 113 316 1.2E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06095 84949a2371f9f30977020865f931a93a 211 Pfam PF01323 DSBA-like thioredoxin domain 8 183 5.4E-12 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 LT40_RS06095 84949a2371f9f30977020865f931a93a 211 Gene3D G3DSA:1.10.472.60 65 170 6.3E-40 T 23-04-2016 IPR023169 UPF0413, central domain LT40_RS06095 84949a2371f9f30977020865f931a93a 211 SUPERFAMILY SSF52833 4 207 3.94E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS06095 84949a2371f9f30977020865f931a93a 211 Gene3D G3DSA:3.40.30.10 2 64 9.8E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 Pfam PF00344 SecY translocase 75 412 3.0E-114 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PIRSF PIRSF004557 9 436 2.8E-119 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 428 28.996 T 23-04-2016 IPR026593 Protein translocase subunit SecY LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 1.7E-89 T 23-04-2016 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 1.7E-89 T 23-04-2016 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 1.7E-89 T 23-04-2016 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 1.7E-89 T 23-04-2016 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 149 174 1.7E-89 T 23-04-2016 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 175 198 1.7E-89 T 23-04-2016 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 22 40 1.7E-89 T 23-04-2016 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 1.7E-89 T 23-04-2016 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 1.7E-89 T 23-04-2016 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 Gene3D G3DSA:1.10.3370.10 16 432 3.9E-160 T 23-04-2016 IPR023201 SecY subunit domain LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PANTHER PTHR10906 15 442 3.6E-221 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 424 3.1E-128 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 SUPERFAMILY SSF103491 15 419 1.57E-127 T 23-04-2016 IPR023201 SecY subunit domain LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 PANTHER PTHR10906:SF2 15 442 3.6E-221 T 23-04-2016 LT40_RS18455 58a9174678c26b96d2d15c3b985db52b 443 ProSitePatterns PS00755 Protein secY signature 1. 75 94 - T 23-04-2016 IPR030659 SecY conserved site LT40_RS11835 6eeb24093d58e6813eaea2d77cf8dbb4 552 Gene3D G3DSA:3.40.190.10 206 310 3.2E-29 T 23-04-2016 LT40_RS11835 6eeb24093d58e6813eaea2d77cf8dbb4 552 PANTHER PTHR30290 13 549 8.5E-117 T 23-04-2016 LT40_RS11835 6eeb24093d58e6813eaea2d77cf8dbb4 552 PIRSF PIRSF002741 10 552 1.2E-95 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS11835 6eeb24093d58e6813eaea2d77cf8dbb4 552 Gene3D G3DSA:3.90.76.10 54 205 4.6E-41 T 23-04-2016 LT40_RS11835 6eeb24093d58e6813eaea2d77cf8dbb4 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 452 1.8E-83 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS11835 6eeb24093d58e6813eaea2d77cf8dbb4 552 SUPERFAMILY SSF53850 41 550 2.17E-119 T 23-04-2016 LT40_RS11835 6eeb24093d58e6813eaea2d77cf8dbb4 552 Gene3D G3DSA:3.10.105.10 311 512 9.6E-43 T 23-04-2016 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 PANTHER PTHR30620 1 466 0.0 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 PANTHER PTHR30620 485 763 0.0 T 23-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 42 345 1.8E-82 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 Gene3D G3DSA:3.20.20.300 29 363 2.7E-104 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 390 646 1.5E-59 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 SUPERFAMILY SSF52279 390 459 1.31E-58 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 SUPERFAMILY SSF52279 493 649 1.31E-58 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 PANTHER PTHR30620:SF5 1 466 0.0 T 23-04-2016 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 PANTHER PTHR30620:SF5 485 763 0.0 T 23-04-2016 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 SUPERFAMILY SSF51445 28 388 7.79E-99 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 Gene3D G3DSA:3.40.50.1700 492 649 4.0E-77 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 Gene3D G3DSA:3.40.50.1700 378 458 4.0E-77 T 23-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 198 214 1.3E-20 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 96 112 1.3E-20 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 268 286 1.3E-20 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 115 134 1.3E-20 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 PRINTS PR00133 Glycosyl hydrolase family 3 signature 161 177 1.3E-20 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 Pfam PF14310 Fibronectin type III-like domain 684 752 7.0E-20 T 23-04-2016 IPR026891 Fibronectin type III-like domain LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 SMART SM01217 683 752 2.3E-27 T 23-04-2016 IPR026891 Fibronectin type III-like domain LT40_RS04440 4d1330a3fd9ce5b1a15c14a2e28f9cb3 763 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 268 285 - T 23-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 LT40_RS08680 184807ce1371d047ce2e10208eb501f8 431 Gene3D G3DSA:1.10.443.10 215 376 4.8E-23 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS08680 184807ce1371d047ce2e10208eb501f8 431 Pfam PF00589 Phage integrase family 206 370 1.1E-17 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS08680 184807ce1371d047ce2e10208eb501f8 431 PANTHER PTHR30629 2 388 3.5E-53 T 23-04-2016 LT40_RS08680 184807ce1371d047ce2e10208eb501f8 431 Gene3D G3DSA:1.10.150.130 93 190 1.7E-5 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal LT40_RS08680 184807ce1371d047ce2e10208eb501f8 431 SUPERFAMILY SSF56349 93 379 7.06E-44 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LT40_RS08680 184807ce1371d047ce2e10208eb501f8 431 PANTHER PTHR30629:SF2 2 388 3.5E-53 T 23-04-2016 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 PANTHER PTHR21631 498 723 2.7E-141 T 23-04-2016 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 PANTHER PTHR21631 31 41 2.7E-141 T 23-04-2016 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 PANTHER PTHR21631:SF7 498 723 2.7E-141 T 23-04-2016 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 PANTHER PTHR21631:SF7 31 41 2.7E-141 T 23-04-2016 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 Gene3D G3DSA:3.20.20.360 336 590 1.8E-144 T 23-04-2016 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 Gene3D G3DSA:3.20.20.360 266 296 1.8E-144 T 23-04-2016 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 Gene3D G3DSA:3.20.20.360 89 135 1.8E-144 T 23-04-2016 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 SUPERFAMILY SSF51645 4 722 3.14E-298 T 23-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 Gene3D G3DSA:1.20.1220.12 592 725 1.0E-72 T 23-04-2016 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 Gene3D G3DSA:2.170.170.11 298 335 6.1E-70 T 23-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 Gene3D G3DSA:2.170.170.11 136 264 6.1E-70 T 23-04-2016 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 Gene3D G3DSA:1.10.1860.10 1 88 2.7E-35 T 23-04-2016 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 5 723 0.0 T 23-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 Hamap MF_00641 Malate synthase G [glcB]. 1 726 396.95 T 23-04-2016 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 LT40_RS20690 7256decc22a6977b7bfb7e4087c251d0 726 Pfam PF01274 Malate synthase 17 699 6.2E-178 T 23-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 LT40_RS18860 fd9450d80d764aa51c2a9cd0c6fb54ef 201 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 3 159 21.356 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 LT40_RS18860 fd9450d80d764aa51c2a9cd0c6fb54ef 201 Pfam PF04390 Lipopolysaccharide-assembly 10 154 2.8E-15 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 LT40_RS18860 fd9450d80d764aa51c2a9cd0c6fb54ef 201 PANTHER PTHR38098:SF1 1 198 1.4E-38 T 23-04-2016 LT40_RS18860 fd9450d80d764aa51c2a9cd0c6fb54ef 201 Gene3D G3DSA:3.30.160.150 18 164 1.2E-28 T 23-04-2016 LT40_RS18860 fd9450d80d764aa51c2a9cd0c6fb54ef 201 PANTHER PTHR38098 1 198 1.4E-38 T 23-04-2016 LT40_RS12735 363a571096ce82384d335e8e95dac90b 282 Pfam PF01066 CDP-alcohol phosphatidyltransferase 43 117 4.8E-14 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LT40_RS12735 363a571096ce82384d335e8e95dac90b 282 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 48 221 6.1E-35 T 23-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 LT40_RS12735 363a571096ce82384d335e8e95dac90b 282 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 95 117 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LT40_RS12735 363a571096ce82384d335e8e95dac90b 282 PANTHER PTHR15362 31 180 8.3E-34 T 23-04-2016 LT40_RS13445 74d9835b7197288d893df71a8955e9e4 150 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 106 123 - T 23-04-2016 IPR001882 Biotin-binding site LT40_RS13445 74d9835b7197288d893df71a8955e9e4 150 PANTHER PTHR23151 1 150 1.3E-49 T 23-04-2016 LT40_RS13445 74d9835b7197288d893df71a8955e9e4 150 Gene3D G3DSA:2.40.50.100 75 149 1.7E-31 T 23-04-2016 LT40_RS13445 74d9835b7197288d893df71a8955e9e4 150 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 149 5.0E-58 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LT40_RS13445 74d9835b7197288d893df71a8955e9e4 150 SUPERFAMILY SSF51230 75 149 6.41E-25 T 23-04-2016 IPR011053 Single hybrid motif LT40_RS13445 74d9835b7197288d893df71a8955e9e4 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 111 124 1.9E-17 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LT40_RS13445 74d9835b7197288d893df71a8955e9e4 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 96 110 1.9E-17 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LT40_RS13445 74d9835b7197288d893df71a8955e9e4 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 79 92 1.9E-17 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 LT40_RS13445 74d9835b7197288d893df71a8955e9e4 150 Pfam PF00364 Biotin-requiring enzyme 78 149 1.7E-25 T 23-04-2016 IPR000089 Biotin/lipoyl attachment LT40_RS02435 270b12c43fe8a9c2fa0ec39ad4357882 569 Gene3D G3DSA:3.40.50.2300 4 132 4.9E-38 T 23-04-2016 LT40_RS02435 270b12c43fe8a9c2fa0ec39ad4357882 569 SUPERFAMILY SSF55874 437 460 1.64E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02435 270b12c43fe8a9c2fa0ec39ad4357882 569 SUPERFAMILY SSF55874 489 564 1.64E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02435 270b12c43fe8a9c2fa0ec39ad4357882 569 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 196 382 3.0E-40 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LT40_RS02435 270b12c43fe8a9c2fa0ec39ad4357882 569 SMART SM00331 184 384 3.2E-11 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LT40_RS02435 270b12c43fe8a9c2fa0ec39ad4357882 569 SMART SM00448 9 122 2.7E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02435 270b12c43fe8a9c2fa0ec39ad4357882 569 SUPERFAMILY SSF81606 234 380 1.6E-5 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LT40_RS02435 270b12c43fe8a9c2fa0ec39ad4357882 569 PANTHER PTHR26402 9 154 3.3E-38 T 23-04-2016 LT40_RS02435 270b12c43fe8a9c2fa0ec39ad4357882 569 SUPERFAMILY SSF52172 8 149 1.57E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS02435 270b12c43fe8a9c2fa0ec39ad4357882 569 Gene3D G3DSA:3.30.565.10 428 550 1.2E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02435 270b12c43fe8a9c2fa0ec39ad4357882 569 Pfam PF00072 Response regulator receiver domain 11 122 2.6E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS03630 e3d08347857ff52a9c7a3360c7071f98 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 451 5.9E-98 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS03630 e3d08347857ff52a9c7a3360c7071f98 533 PANTHER PTHR30290:SF14 28 533 5.7E-204 T 23-04-2016 LT40_RS03630 e3d08347857ff52a9c7a3360c7071f98 533 PANTHER PTHR30290 28 533 5.7E-204 T 23-04-2016 LT40_RS03630 e3d08347857ff52a9c7a3360c7071f98 533 Gene3D G3DSA:3.10.105.10 288 502 1.0E-66 T 23-04-2016 LT40_RS03630 e3d08347857ff52a9c7a3360c7071f98 533 PIRSF PIRSF002741 13 530 5.5E-115 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS03630 e3d08347857ff52a9c7a3360c7071f98 533 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 76 98 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site LT40_RS03630 e3d08347857ff52a9c7a3360c7071f98 533 SUPERFAMILY SSF53850 28 530 6.08E-147 T 23-04-2016 LT40_RS03630 e3d08347857ff52a9c7a3360c7071f98 533 Gene3D G3DSA:3.90.76.10 36 216 1.2E-46 T 23-04-2016 LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 81 1.2E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 41 52 9.1E-5 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 52 71 9.1E-5 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 SUPERFAMILY SSF48008 87 221 1.12E-21 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 SMART SM00345 23 81 2.0E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 PANTHER PTHR11751 17 107 9.6E-25 T 23-04-2016 LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 Gene3D G3DSA:1.10.10.10 14 82 3.9E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 4.3E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 4.3E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 Pfam PF07729 FCD domain 91 214 1.6E-19 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 SUPERFAMILY SSF46785 15 85 6.0E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 SMART SM00895 91 215 2.9E-17 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS11615 95f1bf415ce7164cdc7cfb09bc1594b1 250 Gene3D G3DSA:1.20.120.530 84 227 1.0E-22 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS10480 04e7d1fa806bdf22e31c02ea2d2c7b6f 318 Pfam PF09084 NMT1/THI5 like 60 237 2.3E-17 T 23-04-2016 IPR015168 SsuA/THI5-like LT40_RS10480 04e7d1fa806bdf22e31c02ea2d2c7b6f 318 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 27 296 3.4E-56 T 23-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 LT40_RS10480 04e7d1fa806bdf22e31c02ea2d2c7b6f 318 SMART SM00062 24 264 4.7E-4 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS10480 04e7d1fa806bdf22e31c02ea2d2c7b6f 318 PANTHER PTHR30024 4 309 1.1E-97 T 23-04-2016 LT40_RS10480 04e7d1fa806bdf22e31c02ea2d2c7b6f 318 Gene3D G3DSA:3.40.190.10 103 207 6.5E-23 T 23-04-2016 LT40_RS10480 04e7d1fa806bdf22e31c02ea2d2c7b6f 318 PANTHER PTHR30024:SF3 4 309 1.1E-97 T 23-04-2016 LT40_RS10480 04e7d1fa806bdf22e31c02ea2d2c7b6f 318 SUPERFAMILY SSF53850 29 249 2.42E-42 T 23-04-2016 LT40_RS20710 c60e7224b159a96ea70bb71834d09a64 499 Pfam PF01565 FAD binding domain 56 194 8.9E-37 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LT40_RS20710 c60e7224b159a96ea70bb71834d09a64 499 Gene3D G3DSA:3.30.43.10 15 109 7.7E-27 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LT40_RS20710 c60e7224b159a96ea70bb71834d09a64 499 Gene3D G3DSA:1.10.45.10 432 471 4.3E-9 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 LT40_RS20710 c60e7224b159a96ea70bb71834d09a64 499 Pfam PF02913 FAD linked oxidases, C-terminal domain 230 470 1.2E-69 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 LT40_RS20710 c60e7224b159a96ea70bb71834d09a64 499 SUPERFAMILY SSF55103 204 474 1.06E-78 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LT40_RS20710 c60e7224b159a96ea70bb71834d09a64 499 PANTHER PTHR11748 1 485 1.8E-210 T 23-04-2016 LT40_RS20710 c60e7224b159a96ea70bb71834d09a64 499 PANTHER PTHR11748:SF78 1 485 1.8E-210 T 23-04-2016 LT40_RS20710 c60e7224b159a96ea70bb71834d09a64 499 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 59 470 1.8E-177 T 23-04-2016 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 LT40_RS20710 c60e7224b159a96ea70bb71834d09a64 499 SUPERFAMILY SSF56176 20 231 1.54E-65 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS20710 c60e7224b159a96ea70bb71834d09a64 499 Gene3D G3DSA:3.30.465.10 111 231 1.2E-32 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS15335 763f17dc8d748d367b3e9a99637d9545 313 Gene3D G3DSA:1.10.8.60 202 276 6.4E-22 T 23-04-2016 LT40_RS15335 763f17dc8d748d367b3e9a99637d9545 313 PANTHER PTHR32071 30 305 4.8E-101 T 23-04-2016 LT40_RS15335 763f17dc8d748d367b3e9a99637d9545 313 SUPERFAMILY SSF52540 31 271 8.99E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15335 763f17dc8d748d367b3e9a99637d9545 313 SMART SM00382 50 192 1.6E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS15335 763f17dc8d748d367b3e9a99637d9545 313 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 115 130 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS15335 763f17dc8d748d367b3e9a99637d9545 313 Gene3D G3DSA:3.40.50.300 31 201 2.2E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15335 763f17dc8d748d367b3e9a99637d9545 313 Pfam PF00158 Sigma-54 interaction domain 34 190 2.3E-51 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS15335 763f17dc8d748d367b3e9a99637d9545 313 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 54 67 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 471 4.7E-131 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 745 0.0 T 23-04-2016 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 SUPERFAMILY SSF56719 35 487 2.62E-152 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 SUPERFAMILY SSF101904 501 747 2.88E-52 T 23-04-2016 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 33.65 T 23-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 Gene3D G3DSA:2.120.10.90 500 746 1.2E-24 T 23-04-2016 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 PANTHER PTHR10169:SF30 1 527 0.0 T 23-04-2016 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 PANTHER PTHR10169 1 527 0.0 T 23-04-2016 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 Gene3D G3DSA:3.30.1360.40 242 335 5.5E-24 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 SMART SM00434 15 465 1.5E-227 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 643 0.0065 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 650 697 2.5E-5 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 Gene3D G3DSA:3.90.199.10 34 241 1.9E-103 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 LT40_RS13950 8db28a9c11e0ec85c9f4b9b3f2c5c4f5 751 Gene3D G3DSA:3.90.199.10 337 401 1.9E-103 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 LT40_RS01645 c75ec25052d6bd01b0aa8114dc02c0d6 462 Gene3D G3DSA:1.20.1250.20 254 428 1.7E-22 T 23-04-2016 LT40_RS01645 c75ec25052d6bd01b0aa8114dc02c0d6 462 Gene3D G3DSA:1.20.1250.20 20 190 1.5E-34 T 23-04-2016 LT40_RS01645 c75ec25052d6bd01b0aa8114dc02c0d6 462 PANTHER PTHR23508 26 225 3.8E-62 T 23-04-2016 LT40_RS01645 c75ec25052d6bd01b0aa8114dc02c0d6 462 PANTHER PTHR23508 245 450 3.8E-62 T 23-04-2016 LT40_RS01645 c75ec25052d6bd01b0aa8114dc02c0d6 462 SUPERFAMILY SSF103473 13 429 7.32E-76 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS01645 c75ec25052d6bd01b0aa8114dc02c0d6 462 Pfam PF07690 Major Facilitator Superfamily 27 307 1.6E-31 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS01645 c75ec25052d6bd01b0aa8114dc02c0d6 462 PANTHER PTHR23508:SF15 26 225 3.8E-62 T 23-04-2016 LT40_RS01645 c75ec25052d6bd01b0aa8114dc02c0d6 462 PANTHER PTHR23508:SF15 245 450 3.8E-62 T 23-04-2016 LT40_RS21005 4b34ea0170e997b072add6a8a091fee9 308 PANTHER PTHR33420 178 308 6.3E-23 T 23-04-2016 LT40_RS21005 4b34ea0170e997b072add6a8a091fee9 308 SUPERFAMILY SSF49401 178 307 1.94E-22 T 23-04-2016 IPR008966 Adhesion domain LT40_RS21005 4b34ea0170e997b072add6a8a091fee9 308 Gene3D G3DSA:2.60.40.1090 178 307 1.4E-25 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LT40_RS21005 4b34ea0170e997b072add6a8a091fee9 308 Pfam PF00419 Fimbrial protein 175 307 7.8E-14 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LT40_RS13795 571429ec72de3e625717f283509fe991 289 SUPERFAMILY SSF117892 53 192 1.05E-28 T 23-04-2016 IPR001107 Band 7 domain LT40_RS13795 571429ec72de3e625717f283509fe991 289 Pfam PF01145 SPFH domain / Band 7 family 25 200 1.3E-28 T 23-04-2016 IPR001107 Band 7 domain LT40_RS13795 571429ec72de3e625717f283509fe991 289 PANTHER PTHR10264:SF80 6 286 9.1E-99 T 23-04-2016 LT40_RS13795 571429ec72de3e625717f283509fe991 289 TIGRFAM TIGR01932 hflC: HflC protein 155 284 8.2E-45 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 LT40_RS13795 571429ec72de3e625717f283509fe991 289 PIRSF PIRSF005651 1 289 4.2E-94 T 23-04-2016 IPR010200 HflC GO:0016021|GO:0052547 LT40_RS13795 571429ec72de3e625717f283509fe991 289 PANTHER PTHR10264 6 286 9.1E-99 T 23-04-2016 IPR001972 Stomatin family GO:0016020 LT40_RS13795 571429ec72de3e625717f283509fe991 289 PRINTS PR00721 Stomatin signature 28 50 2.2E-7 T 23-04-2016 IPR001972 Stomatin family GO:0016020 LT40_RS13795 571429ec72de3e625717f283509fe991 289 PRINTS PR00721 Stomatin signature 115 132 2.2E-7 T 23-04-2016 IPR001972 Stomatin family GO:0016020 LT40_RS13795 571429ec72de3e625717f283509fe991 289 PRINTS PR00721 Stomatin signature 180 201 2.2E-7 T 23-04-2016 IPR001972 Stomatin family GO:0016020 LT40_RS13795 571429ec72de3e625717f283509fe991 289 PRINTS PR00721 Stomatin signature 161 179 2.2E-7 T 23-04-2016 IPR001972 Stomatin family GO:0016020 LT40_RS13795 571429ec72de3e625717f283509fe991 289 SMART SM00244 21 185 9.4E-37 T 23-04-2016 IPR001107 Band 7 domain LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 Gene3D G3DSA:3.30.70.270 319 486 6.1E-49 T 23-04-2016 LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 316 476 1.2E-36 T 23-04-2016 IPR000160 GGDEF domain LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 SMART SM00086 238 280 9.2E-12 T 23-04-2016 IPR001610 PAC motif LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 SUPERFAMILY SSF55785 185 280 1.66E-26 T 23-04-2016 IPR000014 PAS domain LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 Gene3D G3DSA:3.20.20.450 492 741 2.1E-93 T 23-04-2016 IPR001633 EAL domain LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 SMART SM00267 307 478 2.8E-52 T 23-04-2016 IPR000160 GGDEF domain LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 PANTHER PTHR33121 291 299 3.5E-75 T 23-04-2016 LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 PANTHER PTHR33121 438 745 3.5E-75 T 23-04-2016 LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 SUPERFAMILY SSF55073 323 479 4.71E-42 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 Pfam PF00990 Diguanylate cyclase, GGDEF domain 318 473 1.0E-42 T 23-04-2016 IPR000160 GGDEF domain LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 SUPERFAMILY SSF141868 494 741 7.45E-84 T 23-04-2016 IPR001633 EAL domain LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 PANTHER PTHR33121:SF13 291 299 3.5E-75 T 23-04-2016 LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 PANTHER PTHR33121:SF13 438 745 3.5E-75 T 23-04-2016 LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 Pfam PF13426 PAS domain 187 279 8.9E-19 T 23-04-2016 IPR000014 PAS domain LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 Gene3D G3DSA:3.30.450.20 184 280 5.6E-30 T 23-04-2016 LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 SMART SM00052 488 734 1.4E-108 T 23-04-2016 IPR001633 EAL domain LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 Pfam PF00563 EAL domain 494 729 3.0E-74 T 23-04-2016 IPR001633 EAL domain LT40_RS11960 e41ba92ebaf8140cf670d85be9542c58 745 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 187 287 2.4E-19 T 23-04-2016 IPR000014 PAS domain LT40_RS10965 f6877176731fb0d16e2e34cdf6209070 653 PANTHER PTHR33121:SF13 382 645 6.1E-68 T 23-04-2016 LT40_RS10965 f6877176731fb0d16e2e34cdf6209070 653 SMART SM00267 216 399 5.4E-45 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10965 f6877176731fb0d16e2e34cdf6209070 653 SUPERFAMILY SSF141868 403 645 3.27E-77 T 23-04-2016 IPR001633 EAL domain LT40_RS10965 f6877176731fb0d16e2e34cdf6209070 653 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 380 1.8E-38 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10965 f6877176731fb0d16e2e34cdf6209070 653 Pfam PF00563 EAL domain 404 635 2.8E-65 T 23-04-2016 IPR001633 EAL domain LT40_RS10965 f6877176731fb0d16e2e34cdf6209070 653 SMART SM00052 398 640 4.0E-80 T 23-04-2016 IPR001633 EAL domain LT40_RS10965 f6877176731fb0d16e2e34cdf6209070 653 PANTHER PTHR33121 382 645 6.1E-68 T 23-04-2016 LT40_RS10965 f6877176731fb0d16e2e34cdf6209070 653 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 227 380 2.0E-30 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10965 f6877176731fb0d16e2e34cdf6209070 653 Gene3D G3DSA:3.30.70.270 229 391 1.5E-45 T 23-04-2016 LT40_RS10965 f6877176731fb0d16e2e34cdf6209070 653 SUPERFAMILY SSF55073 232 380 4.71E-42 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS10965 f6877176731fb0d16e2e34cdf6209070 653 Gene3D G3DSA:3.20.20.450 403 646 3.5E-81 T 23-04-2016 IPR001633 EAL domain LT40_RS02180 1972301d421c49225c9e096478e04100 194 SUPERFAMILY SSF55729 59 171 3.43E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS02180 1972301d421c49225c9e096478e04100 194 Gene3D G3DSA:3.40.630.30 59 176 2.9E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS02180 1972301d421c49225c9e096478e04100 194 PRINTS PR01754 Streptothricin acetyltransferase signature 178 191 8.2E-16 T 23-04-2016 IPR008125 Streptothricin acetyltransferase LT40_RS02180 1972301d421c49225c9e096478e04100 194 PRINTS PR01754 Streptothricin acetyltransferase signature 134 149 8.2E-16 T 23-04-2016 IPR008125 Streptothricin acetyltransferase LT40_RS02180 1972301d421c49225c9e096478e04100 194 PRINTS PR01754 Streptothricin acetyltransferase signature 110 125 8.2E-16 T 23-04-2016 IPR008125 Streptothricin acetyltransferase LT40_RS02180 1972301d421c49225c9e096478e04100 194 PRINTS PR01754 Streptothricin acetyltransferase signature 155 171 8.2E-16 T 23-04-2016 IPR008125 Streptothricin acetyltransferase LT40_RS02180 1972301d421c49225c9e096478e04100 194 PANTHER PTHR23091 59 164 4.1E-17 T 23-04-2016 LT40_RS02180 1972301d421c49225c9e096478e04100 194 Pfam PF00583 Acetyltransferase (GNAT) family 87 164 1.1E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Gene3D G3DSA:2.20.110.10 233 295 7.1E-17 T 23-04-2016 LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Gene3D G3DSA:2.20.110.10 131 232 1.7E-24 T 23-04-2016 LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Gene3D G3DSA:2.20.110.10 29 130 1.8E-18 T 23-04-2016 LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SUPERFAMILY SSF52129 386 529 6.88E-7 T 23-04-2016 IPR029030 Caspase-like domain LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SMART SM00698 238 259 22.0 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SMART SM00698 192 213 0.47 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SMART SM00698 79 100 1.5 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SMART SM00698 101 122 1.1 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SMART SM00698 56 77 18.0 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SMART SM00698 215 236 40.0 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SMART SM00698 146 167 14.0 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SMART SM00698 33 54 1.6 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SMART SM00698 261 282 0.49 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SMART SM00698 169 190 1.9 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Pfam PF02493 MORN repeat 103 118 0.45 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Pfam PF02493 MORN repeat 58 79 0.87 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Pfam PF02493 MORN repeat 194 215 0.024 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Pfam PF02493 MORN repeat 171 192 8.5E-4 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Pfam PF02493 MORN repeat 35 56 0.009 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Pfam PF02493 MORN repeat 148 169 2.5 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Pfam PF02493 MORN repeat 125 146 2.2 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Pfam PF02493 MORN repeat 218 238 1.9 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Pfam PF02493 MORN repeat 81 97 0.098 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Pfam PF02493 MORN repeat 263 284 0.0085 T 23-04-2016 IPR003409 MORN motif LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SUPERFAMILY SSF82185 122 245 1.5E-25 T 23-04-2016 LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 PANTHER PTHR23084 142 328 8.8E-54 T 23-04-2016 LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 PANTHER PTHR23084 28 97 8.8E-54 T 23-04-2016 LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 SUPERFAMILY SSF82185 30 117 4.45E-17 T 23-04-2016 LT40_RS18755 bb8acb801bdd69c3cbce6cecddb564de 569 Pfam PF01650 Peptidase C13 family 400 541 8.9E-36 T 23-04-2016 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 LT40_RS08160 ac15db1327730589f851f5c26204a45b 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS08160 ac15db1327730589f851f5c26204a45b 240 PANTHER PTHR24220 3 239 3.5E-129 T 23-04-2016 LT40_RS08160 ac15db1327730589f851f5c26204a45b 240 Gene3D G3DSA:3.40.50.300 1 237 2.7E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08160 ac15db1327730589f851f5c26204a45b 240 Pfam PF00005 ABC transporter 18 165 4.1E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS08160 ac15db1327730589f851f5c26204a45b 240 PIRSF PIRSF039085 1 240 2.1E-104 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS08160 ac15db1327730589f851f5c26204a45b 240 SUPERFAMILY SSF52540 1 235 1.9E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08160 ac15db1327730589f851f5c26204a45b 240 SMART SM00382 26 213 5.7E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS08160 ac15db1327730589f851f5c26204a45b 240 PANTHER PTHR24220:SF327 3 239 3.5E-129 T 23-04-2016 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 3.3E-36 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 Pfam PF13291 ACT domain 624 700 7.2E-15 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 PANTHER PTHR21262:SF0 2 703 0.0 T 23-04-2016 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 PANTHER PTHR21262 2 703 0.0 T 23-04-2016 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 699 2.6E-237 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 SUPERFAMILY SSF81271 376 448 1.09E-21 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 Gene3D G3DSA:3.30.70.260 626 697 2.7E-7 T 23-04-2016 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 Pfam PF13328 HD domain 26 175 2.2E-50 T 23-04-2016 IPR003607 HD/PDEase domain LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 SMART SM00954 235 345 9.9E-63 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 Pfam PF02824 TGS domain 389 447 2.7E-18 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 SUPERFAMILY SSF55021 626 701 1.42E-7 T 23-04-2016 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 SMART SM00471 41 153 1.9E-7 T 23-04-2016 IPR003607 HD/PDEase domain LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 Gene3D G3DSA:3.10.20.30 388 448 5.7E-21 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 Gene3D G3DSA:3.30.460.10 178 325 7.1E-45 T 23-04-2016 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 SUPERFAMILY SSF81301 181 393 1.26E-59 T 23-04-2016 LT40_RS16480 84a12aa1bcac9de36da98940760a85fe 703 SUPERFAMILY SSF109604 4 190 5.96E-70 T 23-04-2016 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 934 21.127 T 23-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 647 4.0E-236 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 4.2E-7 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 SUPERFAMILY SSF47323 658 934 6.98E-77 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 PANTHER PTHR11946:SF11 6 256 0.0 T 23-04-2016 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 PANTHER PTHR11946:SF11 916 928 0.0 T 23-04-2016 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 PANTHER PTHR11946:SF11 279 881 0.0 T 23-04-2016 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 Gene3D G3DSA:3.90.740.10 203 387 2.1E-52 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 529 542 2.8E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 2.8E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 2.8E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.8E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 235 258 2.8E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 Gene3D G3DSA:1.10.730.10 648 795 5.9E-42 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 SUPERFAMILY SSF52374 3 199 4.83E-129 T 23-04-2016 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 SUPERFAMILY SSF52374 401 653 4.83E-129 T 23-04-2016 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 Pfam PF08264 Anticodon-binding domain of tRNA 691 847 4.2E-27 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 SUPERFAMILY SSF50677 201 401 4.6E-52 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 PANTHER PTHR11946 6 256 0.0 T 23-04-2016 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 PANTHER PTHR11946 916 928 0.0 T 23-04-2016 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 PANTHER PTHR11946 279 881 0.0 T 23-04-2016 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 849 3.8E-271 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 Gene3D G3DSA:3.40.50.620 14 197 6.2E-130 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS19450 1eb34339fa94b4b7cbe7174f8586287d 943 Gene3D G3DSA:3.40.50.620 404 642 6.2E-130 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS14490 703b7a9a17c0c9f79a5ba89b856b1c41 137 PANTHER PTHR12231 20 137 5.0E-25 T 23-04-2016 LT40_RS14490 703b7a9a17c0c9f79a5ba89b856b1c41 137 Pfam PF00581 Rhodanese-like domain 39 130 2.0E-13 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14490 703b7a9a17c0c9f79a5ba89b856b1c41 137 SUPERFAMILY SSF52821 14 137 5.37E-30 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14490 703b7a9a17c0c9f79a5ba89b856b1c41 137 Gene3D G3DSA:3.40.250.10 20 137 1.3E-24 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14490 703b7a9a17c0c9f79a5ba89b856b1c41 137 SMART SM00450 38 134 1.3E-13 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14490 703b7a9a17c0c9f79a5ba89b856b1c41 137 PANTHER PTHR12231:SF138 20 137 5.0E-25 T 23-04-2016 LT40_RS06545 81ad68405f40e43b6340c2fcdb1b325b 86 Pfam PF07023 Protein of unknown function (DUF1315) 6 66 2.8E-26 T 23-04-2016 IPR009749 Protein of unknown function DUF1315 LT40_RS01340 1a9cf41f36963bcd1e137b1316364b3a 469 SUPERFAMILY SSF56059 14 210 6.71E-65 T 23-04-2016 LT40_RS01340 1a9cf41f36963bcd1e137b1316364b3a 469 SUPERFAMILY SSF56059 315 460 6.71E-65 T 23-04-2016 LT40_RS01340 1a9cf41f36963bcd1e137b1316364b3a 469 PIRSF PIRSF005522 1 469 9.2E-231 T 23-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 LT40_RS01340 1a9cf41f36963bcd1e137b1316364b3a 469 Pfam PF14403 Circularly permuted ATP-grasp type 2 72 445 1.5E-161 T 23-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 LT40_RS01340 1a9cf41f36963bcd1e137b1316364b3a 469 PANTHER PTHR34595 3 469 8.1E-297 T 23-04-2016 LT40_RS01340 1a9cf41f36963bcd1e137b1316364b3a 469 PANTHER PTHR34595:SF3 3 469 8.1E-297 T 23-04-2016 LT40_RS17025 8c0883711d829818077ee361d541b4f6 452 Pfam PF00120 Glutamine synthetase, catalytic domain 115 446 8.7E-110 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS17025 8c0883711d829818077ee361d541b4f6 452 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 250 265 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS17025 8c0883711d829818077ee361d541b4f6 452 SUPERFAMILY SSF55931 114 449 1.08E-105 T 23-04-2016 LT40_RS17025 8c0883711d829818077ee361d541b4f6 452 SUPERFAMILY SSF54368 5 113 1.7E-18 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS17025 8c0883711d829818077ee361d541b4f6 452 Gene3D G3DSA:3.10.20.70 6 117 2.5E-15 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS17025 8c0883711d829818077ee361d541b4f6 452 PANTHER PTHR20852:SF63 1 452 0.0 T 23-04-2016 LT40_RS17025 8c0883711d829818077ee361d541b4f6 452 SMART SM01230 114 370 7.7E-112 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS17025 8c0883711d829818077ee361d541b4f6 452 PANTHER PTHR20852 1 452 0.0 T 23-04-2016 LT40_RS17025 8c0883711d829818077ee361d541b4f6 452 Gene3D G3DSA:3.30.590.10 118 438 3.3E-93 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 LT40_RS03165 eadceaec607307b29de0349234b4b3f9 953 Pfam PF02347 Glycine cleavage system P-protein 16 440 4.7E-182 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 LT40_RS03165 eadceaec607307b29de0349234b4b3f9 953 Pfam PF02347 Glycine cleavage system P-protein 449 734 2.1E-10 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 LT40_RS03165 eadceaec607307b29de0349234b4b3f9 953 PANTHER PTHR11773 6 952 0.0 T 23-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 LT40_RS03165 eadceaec607307b29de0349234b4b3f9 953 PANTHER PTHR11773:SF1 6 952 0.0 T 23-04-2016 LT40_RS03165 eadceaec607307b29de0349234b4b3f9 953 SUPERFAMILY SSF53383 16 440 4.19E-97 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS03165 eadceaec607307b29de0349234b4b3f9 953 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 7 950 26.073 T 23-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 LT40_RS03165 eadceaec607307b29de0349234b4b3f9 953 SUPERFAMILY SSF53383 923 945 1.24E-103 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS03165 eadceaec607307b29de0349234b4b3f9 953 SUPERFAMILY SSF53383 453 881 1.24E-103 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS03165 eadceaec607307b29de0349234b4b3f9 953 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 16 944 0.0 T 23-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 LT40_RS03165 eadceaec607307b29de0349234b4b3f9 953 Gene3D G3DSA:3.40.640.10 83 304 8.1E-13 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS03165 eadceaec607307b29de0349234b4b3f9 953 Gene3D G3DSA:3.40.640.10 501 736 2.2E-39 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS05050 a3788cda4831bd3c6bc780bb7a154a5a 296 SUPERFAMILY SSF52540 48 190 1.82E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05050 a3788cda4831bd3c6bc780bb7a154a5a 296 PANTHER PTHR13779 4 189 1.1E-90 T 23-04-2016 LT40_RS05050 a3788cda4831bd3c6bc780bb7a154a5a 296 PANTHER PTHR13779 216 288 1.1E-90 T 23-04-2016 LT40_RS05050 a3788cda4831bd3c6bc780bb7a154a5a 296 Pfam PF05673 Protein of unknown function (DUF815) 34 288 9.3E-103 T 23-04-2016 IPR008533 Domain of unknown function DUF815 LT40_RS05050 a3788cda4831bd3c6bc780bb7a154a5a 296 PANTHER PTHR13779:SF28 4 189 1.1E-90 T 23-04-2016 LT40_RS05050 a3788cda4831bd3c6bc780bb7a154a5a 296 PANTHER PTHR13779:SF28 216 288 1.1E-90 T 23-04-2016 LT40_RS05050 a3788cda4831bd3c6bc780bb7a154a5a 296 Gene3D G3DSA:3.40.50.300 57 189 9.5E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06390 299d9666d29b6e4e922d110f5cfc58b3 426 PIRSF PIRSF006066 1 426 6.6E-167 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 LT40_RS06390 299d9666d29b6e4e922d110f5cfc58b3 426 PANTHER PTHR33362 1 422 8.1E-207 T 23-04-2016 LT40_RS06390 299d9666d29b6e4e922d110f5cfc58b3 426 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 417 9.3E-110 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit LT40_RS06390 299d9666d29b6e4e922d110f5cfc58b3 426 PANTHER PTHR33362:SF2 1 422 8.1E-207 T 23-04-2016 LT40_RS06390 299d9666d29b6e4e922d110f5cfc58b3 426 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 3.8E-128 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 LT40_RS20820 45e3d2c937c87fd4ce640688b8222ee3 312 Gene3D G3DSA:3.40.50.1170 1 182 3.7E-44 T 23-04-2016 IPR027474 L-asparaginase, N-terminal LT40_RS20820 45e3d2c937c87fd4ce640688b8222ee3 312 SMART SM00870 1 301 1.0E-77 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LT40_RS20820 45e3d2c937c87fd4ce640688b8222ee3 312 PIRSF PIRSF500176 1 309 1.4E-64 T 23-04-2016 LT40_RS20820 45e3d2c937c87fd4ce640688b8222ee3 312 SUPERFAMILY SSF53774 1 298 2.88E-72 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LT40_RS20820 45e3d2c937c87fd4ce640688b8222ee3 312 PIRSF PIRSF001220 1 310 1.9E-69 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LT40_RS20820 45e3d2c937c87fd4ce640688b8222ee3 312 PANTHER PTHR11707:SF29 8 295 2.3E-39 T 23-04-2016 LT40_RS20820 45e3d2c937c87fd4ce640688b8222ee3 312 PRINTS PR00139 Asparaginase/glutaminase family signature 239 257 1.6E-6 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LT40_RS20820 45e3d2c937c87fd4ce640688b8222ee3 312 PRINTS PR00139 Asparaginase/glutaminase family signature 66 84 1.6E-6 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LT40_RS20820 45e3d2c937c87fd4ce640688b8222ee3 312 PANTHER PTHR11707 8 295 2.3E-39 T 23-04-2016 LT40_RS20820 45e3d2c937c87fd4ce640688b8222ee3 312 Gene3D G3DSA:3.40.50.40 194 306 1.8E-20 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain LT40_RS20820 45e3d2c937c87fd4ce640688b8222ee3 312 Pfam PF00710 Asparaginase, N-terminal 1 175 3.0E-41 T 23-04-2016 IPR027474 L-asparaginase, N-terminal LT40_RS03060 9545551bba549fbe42071331d8f0797f 479 SUPERFAMILY SSF52540 165 450 8.07E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03060 9545551bba549fbe42071331d8f0797f 479 PANTHER PTHR24031 78 471 1.7E-170 T 23-04-2016 LT40_RS03060 9545551bba549fbe42071331d8f0797f 479 Gene3D G3DSA:3.40.50.300 85 306 7.9E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03060 9545551bba549fbe42071331d8f0797f 479 SMART SM00487 109 316 1.9E-52 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS03060 9545551bba549fbe42071331d8f0797f 479 Pfam PF00270 DEAD/DEAH box helicase 114 289 1.2E-47 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS03060 9545551bba549fbe42071331d8f0797f 479 PANTHER PTHR24031:SF261 78 471 1.7E-170 T 23-04-2016 LT40_RS03060 9545551bba549fbe42071331d8f0797f 479 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 245 253 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LT40_RS03060 9545551bba549fbe42071331d8f0797f 479 Pfam PF00271 Helicase conserved C-terminal domain 324 433 1.5E-28 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS03060 9545551bba549fbe42071331d8f0797f 479 SMART SM00490 352 433 4.0E-30 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS03060 9545551bba549fbe42071331d8f0797f 479 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 89 471 52.379 T 23-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 LT40_RS03060 9545551bba549fbe42071331d8f0797f 479 Gene3D G3DSA:3.40.50.300 307 462 3.6E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09080 2ab5176a80d6278a3aa32353e8e8d167 562 SUPERFAMILY SSF53335 9 181 1.88E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS09080 2ab5176a80d6278a3aa32353e8e8d167 562 PANTHER PTHR10108:SF779 1 146 5.2E-13 T 23-04-2016 LT40_RS09080 2ab5176a80d6278a3aa32353e8e8d167 562 PANTHER PTHR10108:SF779 551 562 5.2E-13 T 23-04-2016 LT40_RS09080 2ab5176a80d6278a3aa32353e8e8d167 562 Gene3D G3DSA:3.40.50.150 37 187 2.7E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS09080 2ab5176a80d6278a3aa32353e8e8d167 562 Pfam PF08241 Methyltransferase domain 44 137 1.8E-12 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LT40_RS09080 2ab5176a80d6278a3aa32353e8e8d167 562 PANTHER PTHR10108 1 146 5.2E-13 T 23-04-2016 LT40_RS09080 2ab5176a80d6278a3aa32353e8e8d167 562 PANTHER PTHR10108 551 562 5.2E-13 T 23-04-2016 LT40_RS11460 2ffbde6c7ea673a9f6db1b8571fda1c9 99 TIGRFAM TIGR03976 chp_LLNDYxLRE: His-Xaa-Ser system protein HxsD 9 95 3.3E-19 T 23-04-2016 IPR023974 His-Xaa-Ser system protein HxsD LT40_RS04610 23237764e8cccb62e50d6e237e0ce291 197 SUPERFAMILY SSF89069 6 70 3.53E-12 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 LT40_RS04610 23237764e8cccb62e50d6e237e0ce291 197 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 7 72 7.5E-11 T 23-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 LT40_RS04610 23237764e8cccb62e50d6e237e0ce291 197 PANTHER PTHR38104 1 197 4.3E-34 T 23-04-2016 LT40_RS04610 23237764e8cccb62e50d6e237e0ce291 197 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 119 177 5.3E-7 T 23-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal LT40_RS03800 c5fbf3c49e684e258d148ef9eeb83ac3 181 Pfam PF03968 OstA-like protein 34 145 1.1E-25 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal LT40_RS03800 c5fbf3c49e684e258d148ef9eeb83ac3 181 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 24 171 4.6E-47 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 LT40_RS03800 c5fbf3c49e684e258d148ef9eeb83ac3 181 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 4 171 23.354 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 LT40_RS03800 c5fbf3c49e684e258d148ef9eeb83ac3 181 PANTHER PTHR36504 1 176 3.6E-40 T 23-04-2016 LT40_RS03800 c5fbf3c49e684e258d148ef9eeb83ac3 181 Gene3D G3DSA:2.60.450.10 25 160 1.1E-32 T 23-04-2016 LT40_RS07620 5fbc88956cde22b7aace20a4584b35e4 904 Pfam PF10139 Putative bacterial virulence factor 25 898 0.0 T 23-04-2016 IPR017030 Virulence effector, SrfC LT40_RS07620 5fbc88956cde22b7aace20a4584b35e4 904 PIRSF PIRSF034586 1 904 0.0 T 23-04-2016 IPR017030 Virulence effector, SrfC LT40_RS07445 37ea3b30bd9265b0c1784f92e67325be 318 PANTHER PTHR32196:SF9 9 316 4.2E-85 T 23-04-2016 LT40_RS07445 37ea3b30bd9265b0c1784f92e67325be 318 PANTHER PTHR32196 9 316 4.2E-85 T 23-04-2016 LT40_RS07445 37ea3b30bd9265b0c1784f92e67325be 318 Gene3D G3DSA:3.40.50.2300 160 312 3.6E-46 T 23-04-2016 LT40_RS07445 37ea3b30bd9265b0c1784f92e67325be 318 Pfam PF13407 Periplasmic binding protein domain 36 298 2.2E-54 T 23-04-2016 IPR025997 Periplasmic binding protein LT40_RS07445 37ea3b30bd9265b0c1784f92e67325be 318 Gene3D G3DSA:3.40.50.2300 30 159 4.1E-39 T 23-04-2016 LT40_RS07445 37ea3b30bd9265b0c1784f92e67325be 318 SUPERFAMILY SSF53822 13 317 1.34E-75 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 Pfam PF00691 OmpA family 238 333 9.7E-23 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 PANTHER PTHR30128 169 340 4.1E-61 T 23-04-2016 LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 SUPERFAMILY SSF103088 223 338 6.02E-38 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 Gene3D G3DSA:4.10.1080.10 190 234 9.7E-7 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 SUPERFAMILY SSF103647 194 225 1.44E-8 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 SUPERFAMILY SSF56925 39 180 8.11E-17 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 Gene3D G3DSA:2.40.160.20 31 189 1.1E-13 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 Pfam PF05736 OprF membrane domain 1 178 2.6E-82 T 23-04-2016 IPR008722 Outer membrane porin F, N-terminal LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 ProSitePatterns PS01068 OmpA-like domain. 270 315 - T 23-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 PANTHER PTHR30128:SF10 169 340 4.1E-61 T 23-04-2016 LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 Gene3D G3DSA:3.30.1330.60 235 339 4.3E-40 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 PRINTS PR01021 OMPA domain signature 268 283 1.1E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 PRINTS PR01021 OMPA domain signature 238 260 1.1E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS01935 85dfcf230b5f8e182c9caa975169b6e5 344 PRINTS PR01021 OMPA domain signature 283 299 1.1E-15 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS00140 562fcd4fdd2d139a89c9be6e1461e254 477 Gene3D G3DSA:1.25.40.10 281 451 3.2E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS00140 562fcd4fdd2d139a89c9be6e1461e254 477 Pfam PF01435 Peptidase family M48 68 250 4.5E-28 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LT40_RS00140 562fcd4fdd2d139a89c9be6e1461e254 477 SUPERFAMILY SSF48452 275 451 4.14E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS00140 562fcd4fdd2d139a89c9be6e1461e254 477 Gene3D G3DSA:3.30.2010.10 59 142 1.2E-15 T 23-04-2016 LT40_RS00140 562fcd4fdd2d139a89c9be6e1461e254 477 Pfam PF14559 Tetratricopeptide repeat 346 408 8.3E-8 T 23-04-2016 LT40_RS00140 562fcd4fdd2d139a89c9be6e1461e254 477 Pfam PF14559 Tetratricopeptide repeat 276 333 1.4E-8 T 23-04-2016 LT40_RS00140 562fcd4fdd2d139a89c9be6e1461e254 477 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 473 30.942 T 23-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 LT40_RS00140 562fcd4fdd2d139a89c9be6e1461e254 477 PANTHER PTHR22726 1 345 5.9E-109 T 23-04-2016 LT40_RS00140 562fcd4fdd2d139a89c9be6e1461e254 477 PANTHER PTHR22726:SF10 1 345 5.9E-109 T 23-04-2016 LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 SUPERFAMILY SSF52518 2 183 1.31E-51 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 SUPERFAMILY SSF52518 359 527 5.18E-43 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 324 3.0E-27 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 Gene3D G3DSA:3.40.50.1220 183 368 4.2E-36 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 524 1.5E-32 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 171 9.9E-53 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 PANTHER PTHR18968 1 529 3.4E-147 T 23-04-2016 LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 Gene3D G3DSA:3.40.50.970 2 179 3.4E-57 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 Gene3D G3DSA:3.40.50.970 369 525 5.8E-45 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 SUPERFAMILY SSF52467 156 347 2.86E-37 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12020 099d0890689a3693731ebc5028ccaafd 533 PANTHER PTHR18968:SF13 1 529 3.4E-147 T 23-04-2016 LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 SUPERFAMILY SSF53335 679 703 6.12E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 SUPERFAMILY SSF53335 431 591 6.12E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 PANTHER PTHR23150 1 436 3.5E-101 T 23-04-2016 LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 589 710 3.9E-40 T 23-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 Gene3D G3DSA:3.90.1580.10 330 404 8.9E-13 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 Gene3D G3DSA:3.90.1580.10 185 322 3.1E-39 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 Pfam PF12867 DinB superfamily 21 151 1.3E-11 T 23-04-2016 IPR024775 DinB-like domain LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 Gene3D G3DSA:3.40.50.150 454 589 5.0E-4 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 Gene3D G3DSA:3.40.50.150 639 640 5.0E-4 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 Gene3D G3DSA:3.40.50.150 680 698 5.0E-4 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 SUPERFAMILY SSF56436 189 402 2.67E-60 T 23-04-2016 IPR016187 C-type lectin fold LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 PANTHER PTHR23150:SF24 1 436 3.5E-101 T 23-04-2016 LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 Pfam PF03781 Sulfatase-modifying factor enzyme 1 189 325 8.1E-26 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 17 399 2.8E-151 T 23-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 LT40_RS12290 3b0f0ca2976e7dde2a74f28a9e286ce9 715 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 415 712 7.3E-117 T 23-04-2016 IPR017804 Methyltransferase EgtD-like LT40_RS01255 29141179bb2c0d67ac1ee96ab2263798 181 Gene3D G3DSA:1.10.286.10 3 50 4.3E-20 T 23-04-2016 LT40_RS01255 29141179bb2c0d67ac1ee96ab2263798 181 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 60 76 - T 23-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 LT40_RS01255 29141179bb2c0d67ac1ee96ab2263798 181 PANTHER PTHR11109 2 181 2.0E-113 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 LT40_RS01255 29141179bb2c0d67ac1ee96ab2263798 181 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 4 181 6.3E-76 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 LT40_RS01255 29141179bb2c0d67ac1ee96ab2263798 181 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 181 36.707 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 LT40_RS01255 29141179bb2c0d67ac1ee96ab2263798 181 Pfam PF01227 GTP cyclohydrolase I 4 180 8.8E-76 T 23-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 LT40_RS01255 29141179bb2c0d67ac1ee96ab2263798 181 SUPERFAMILY SSF55620 3 181 1.7E-77 T 23-04-2016 LT40_RS01255 29141179bb2c0d67ac1ee96ab2263798 181 Gene3D G3DSA:3.30.1130.10 53 181 1.7E-62 T 23-04-2016 LT40_RS16725 963f770f30457da110d7947fd275ced8 276 PANTHER PTHR31689:SF0 1 276 2.2E-134 T 23-04-2016 LT40_RS16725 963f770f30457da110d7947fd275ced8 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.908 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS16725 963f770f30457da110d7947fd275ced8 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 5.5E-91 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS16725 963f770f30457da110d7947fd275ced8 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 23-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS16725 963f770f30457da110d7947fd275ced8 276 PANTHER PTHR31689 1 276 2.2E-134 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS16725 963f770f30457da110d7947fd275ced8 276 SUPERFAMILY SSF54506 3 276 2.12E-56 T 23-04-2016 LT40_RS16725 963f770f30457da110d7947fd275ced8 276 Gene3D G3DSA:3.10.310.10 123 264 1.8E-51 T 23-04-2016 LT40_RS16725 963f770f30457da110d7947fd275ced8 276 Gene3D G3DSA:3.10.310.10 3 122 2.3E-49 T 23-04-2016 LT40_RS16725 963f770f30457da110d7947fd275ced8 276 Pfam PF01678 Diaminopimelate epimerase 154 269 8.2E-32 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS16725 963f770f30457da110d7947fd275ced8 276 Pfam PF01678 Diaminopimelate epimerase 5 126 2.8E-32 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 LT40_RS07985 7980d32143df68a272371a03495599a5 243 SMART SM00866 93 233 5.6E-9 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LT40_RS07985 7980d32143df68a272371a03495599a5 243 Gene3D G3DSA:1.10.10.10 3 70 1.0E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07985 7980d32143df68a272371a03495599a5 243 Pfam PF07702 UTRA domain 106 232 3.0E-13 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LT40_RS07985 7980d32143df68a272371a03495599a5 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 2.6E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS07985 7980d32143df68a272371a03495599a5 243 SUPERFAMILY SSF46785 3 72 1.3E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07985 7980d32143df68a272371a03495599a5 243 Gene3D G3DSA:3.40.1410.10 97 236 5.9E-24 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LT40_RS07985 7980d32143df68a272371a03495599a5 243 PANTHER PTHR11751 4 109 9.1E-19 T 23-04-2016 LT40_RS07985 7980d32143df68a272371a03495599a5 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 2.0E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS07985 7980d32143df68a272371a03495599a5 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 2.0E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS07985 7980d32143df68a272371a03495599a5 243 SMART SM00345 9 68 2.8E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS07985 7980d32143df68a272371a03495599a5 243 SUPERFAMILY SSF64288 56 241 4.55E-24 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LT40_RS18190 be58a055806945abb8ebf34748d407ce 140 PANTHER PTHR34352 1 140 7.1E-52 T 23-04-2016 LT40_RS18190 be58a055806945abb8ebf34748d407ce 140 Pfam PF02566 OsmC-like protein 34 132 1.6E-19 T 23-04-2016 IPR003718 OsmC/Ohr family LT40_RS18190 be58a055806945abb8ebf34748d407ce 140 Gene3D G3DSA:3.30.300.20 39 137 1.1E-42 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta LT40_RS18190 be58a055806945abb8ebf34748d407ce 140 Gene3D G3DSA:2.20.25.10 1 34 6.3E-17 T 23-04-2016 LT40_RS18190 be58a055806945abb8ebf34748d407ce 140 SUPERFAMILY SSF82784 1 137 1.05E-40 T 23-04-2016 IPR003718 OsmC/Ohr family LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 Pfam PF00750 tRNA synthetases class I (R) 102 448 3.0E-126 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 SUPERFAMILY SSF52374 114 455 2.21E-88 T 23-04-2016 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 PANTHER PTHR11956 1 578 2.5E-253 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 127 138 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 578 26.431 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 158 171 1.5E-24 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 134 150 1.5E-24 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 119 134 1.5E-24 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 PRINTS PR01038 Arginyl-tRNA synthetase signature 305 326 1.5E-24 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 SMART SM01016 3 91 1.3E-37 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 90 8.7E-25 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 SUPERFAMILY SSF55190 2 100 1.23E-22 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 SMART SM00836 462 578 1.3E-36 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 Gene3D G3DSA:1.10.730.10 456 578 3.4E-34 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 2 578 4.7E-167 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 Pfam PF05746 DALR anticodon binding domain 462 578 7.8E-33 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 Gene3D G3DSA:3.30.1360.70 2 107 6.7E-32 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 PANTHER PTHR11956:SF1 1 578 2.5E-253 T 23-04-2016 LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 Gene3D G3DSA:3.40.50.620 115 455 3.2E-110 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS14270 94da0f6bb39807c8c4ed27f2be04007a 578 SUPERFAMILY SSF47323 456 578 9.81E-34 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS09270 f87199fecd21f0162d09bec59de65ec3 207 Pfam PF01081 KDPG and KHG aldolase 5 182 2.8E-31 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LT40_RS09270 f87199fecd21f0162d09bec59de65ec3 207 SUPERFAMILY SSF51569 4 204 8.97E-58 T 23-04-2016 LT40_RS09270 f87199fecd21f0162d09bec59de65ec3 207 PANTHER PTHR30246 4 203 1.2E-54 T 23-04-2016 LT40_RS09270 f87199fecd21f0162d09bec59de65ec3 207 Gene3D G3DSA:3.20.20.70 3 205 1.2E-66 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS09270 f87199fecd21f0162d09bec59de65ec3 207 PANTHER PTHR30246:SF1 4 203 1.2E-54 T 23-04-2016 LT40_RS02495 c0c91e99331affbcb8f00fad697e1797 439 SMART SM00382 218 403 4.5E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02495 c0c91e99331affbcb8f00fad697e1797 439 Gene3D G3DSA:1.20.120.140 192 231 1.4E-6 T 23-04-2016 LT40_RS02495 c0c91e99331affbcb8f00fad697e1797 439 PANTHER PTHR11564 127 426 1.2E-67 T 23-04-2016 LT40_RS02495 c0c91e99331affbcb8f00fad697e1797 439 SMART SM00962 219 411 1.4E-51 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS02495 c0c91e99331affbcb8f00fad697e1797 439 Gene3D G3DSA:3.40.50.300 232 408 4.1E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02495 c0c91e99331affbcb8f00fad697e1797 439 SUPERFAMILY SSF52540 216 408 4.5E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02495 c0c91e99331affbcb8f00fad697e1797 439 PANTHER PTHR11564:SF3 127 426 1.2E-67 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 LT40_RS02495 c0c91e99331affbcb8f00fad697e1797 439 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 307 1.2E-76 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 LT40_RS02495 c0c91e99331affbcb8f00fad697e1797 439 Pfam PF00448 SRP54-type protein, GTPase domain 221 409 2.1E-46 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 2.8E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.8E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 2.8E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 PANTHER PTHR30537 6 295 7.3E-74 T 23-04-2016 LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 SUPERFAMILY SSF46785 12 119 6.9E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 PANTHER PTHR30537:SF26 6 295 7.3E-74 T 23-04-2016 LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 Gene3D G3DSA:3.40.190.10 186 267 3.7E-19 T 23-04-2016 LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 SUPERFAMILY SSF53850 102 301 3.62E-33 T 23-04-2016 LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 Gene3D G3DSA:1.10.10.10 10 92 3.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 Gene3D G3DSA:3.40.190.10 102 185 1.1E-25 T 23-04-2016 LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 Pfam PF03466 LysR substrate binding domain 102 296 1.6E-31 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS04515 f5a4ac66c3930ef657cbf6a7c3516348 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 4.9E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS20755 ac8323aab52d2814d0407a002e87d2f9 139 Gene3D G3DSA:3.40.630.30 7 110 2.8E-9 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS20755 ac8323aab52d2814d0407a002e87d2f9 139 SUPERFAMILY SSF55729 27 113 7.46E-11 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS20755 ac8323aab52d2814d0407a002e87d2f9 139 Pfam PF00583 Acetyltransferase (GNAT) family 39 106 2.3E-5 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 SUPERFAMILY SSF50156 389 476 3.42E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 PRINTS PR00834 HtrA/DegQ protease family signature 206 223 3.4E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 PRINTS PR00834 HtrA/DegQ protease family signature 132 152 3.4E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 PRINTS PR00834 HtrA/DegQ protease family signature 172 196 3.4E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 PRINTS PR00834 HtrA/DegQ protease family signature 111 123 3.4E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 PRINTS PR00834 HtrA/DegQ protease family signature 228 245 3.4E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 PRINTS PR00834 HtrA/DegQ protease family signature 314 326 3.4E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 SMART SM00228 274 356 8.2E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 SMART SM00228 388 467 6.1E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 Gene3D G3DSA:2.30.42.10 389 478 4.1E-20 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 Gene3D G3DSA:2.30.42.10 276 372 2.4E-30 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 PANTHER PTHR22939 21 53 1.1E-147 T 23-04-2016 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 PANTHER PTHR22939 84 390 1.1E-147 T 23-04-2016 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 32 474 6.6E-164 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 Gene3D G3DSA:2.40.10.10 164 275 1.0E-46 T 23-04-2016 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 PANTHER PTHR22939:SF98 21 53 1.1E-147 T 23-04-2016 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 PANTHER PTHR22939:SF98 84 390 1.1E-147 T 23-04-2016 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 SUPERFAMILY SSF50494 99 283 1.24E-70 T 23-04-2016 IPR009003 Peptidase S1, PA clan LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 SUPERFAMILY SSF50494 9 51 1.24E-70 T 23-04-2016 IPR009003 Peptidase S1, PA clan LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 Pfam PF13365 Trypsin-like peptidase domain 102 235 7.0E-35 T 23-04-2016 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 SUPERFAMILY SSF50156 245 370 3.06E-23 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 Gene3D G3DSA:2.40.10.10 30 163 2.6E-39 T 23-04-2016 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 Pfam PF13180 PDZ domain 389 470 6.4E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS04620 0ccfab2cf5ce5957fb04ce56ef4d4ea0 478 Pfam PF13180 PDZ domain 275 365 2.4E-17 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 SUPERFAMILY SSF51735 4 255 5.91E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.8E-37 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PANTHER PTHR24322:SF330 10 136 3.8E-51 T 23-04-2016 LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PANTHER PTHR24322:SF330 152 184 3.8E-51 T 23-04-2016 LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 6.6E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.6E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 6.6E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 Gene3D G3DSA:3.40.50.720 2 255 2.8E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PANTHER PTHR24322 10 136 3.8E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 PANTHER PTHR24322 152 184 3.8E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 256 2.2E-102 T 23-04-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 LT40_RS08930 82b611bf4ac3e5e9aaf9eee3c7f0fceb 256 Pfam PF00106 short chain dehydrogenase 6 196 1.1E-55 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS01820 53f6149c3c8bc822b212bb7086e1bc5b 834 Pfam PF02687 FtsX-like permease family 264 370 4.6E-8 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LT40_RS01820 53f6149c3c8bc822b212bb7086e1bc5b 834 Pfam PF02687 FtsX-like permease family 715 825 9.0E-8 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LT40_RS01820 53f6149c3c8bc822b212bb7086e1bc5b 834 PANTHER PTHR30287 8 834 4.3E-146 T 23-04-2016 LT40_RS13955 00751dfd24e0f320412db3de7df04d29 174 PANTHER PTHR41535:SF1 1 172 3.4E-34 T 23-04-2016 LT40_RS13955 00751dfd24e0f320412db3de7df04d29 174 SUPERFAMILY SSF50630 59 160 7.67E-21 T 23-04-2016 IPR021109 Aspartic peptidase domain LT40_RS13955 00751dfd24e0f320412db3de7df04d29 174 Pfam PF13975 gag-polyprotein putative aspartyl protease 71 156 3.8E-25 T 23-04-2016 LT40_RS13955 00751dfd24e0f320412db3de7df04d29 174 PANTHER PTHR41535 1 172 3.4E-34 T 23-04-2016 LT40_RS13955 00751dfd24e0f320412db3de7df04d29 174 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 54 170 9.4E-33 T 23-04-2016 IPR011969 Clan AA aspartic peptidase, C-terminal LT40_RS13955 00751dfd24e0f320412db3de7df04d29 174 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 78 89 - T 23-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 LT40_RS01825 bf763549807307bb16e27e55445bea3d 227 SUPERFAMILY SSF52540 5 223 1.09E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01825 bf763549807307bb16e27e55445bea3d 227 PANTHER PTHR24220 7 227 4.8E-107 T 23-04-2016 LT40_RS01825 bf763549807307bb16e27e55445bea3d 227 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS01825 bf763549807307bb16e27e55445bea3d 227 PANTHER PTHR24220:SF509 7 227 4.8E-107 T 23-04-2016 LT40_RS01825 bf763549807307bb16e27e55445bea3d 227 Gene3D G3DSA:3.40.50.300 5 223 3.7E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01825 bf763549807307bb16e27e55445bea3d 227 Pfam PF00005 ABC transporter 25 171 2.3E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS01825 bf763549807307bb16e27e55445bea3d 227 SMART SM00382 34 220 1.3E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS17520 97def45690f3d02d50815f77cc30e1fc 650 Pfam PF02754 Cysteine-rich domain 521 607 2.0E-14 T 23-04-2016 IPR004017 Cysteine-rich domain LT40_RS17520 97def45690f3d02d50815f77cc30e1fc 650 Pfam PF02754 Cysteine-rich domain 398 477 0.0014 T 23-04-2016 IPR004017 Cysteine-rich domain LT40_RS17520 97def45690f3d02d50815f77cc30e1fc 650 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 319 330 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS17520 97def45690f3d02d50815f77cc30e1fc 650 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 245 256 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS17520 97def45690f3d02d50815f77cc30e1fc 650 PANTHER PTHR11921 217 630 2.4E-170 T 23-04-2016 LT40_RS17520 97def45690f3d02d50815f77cc30e1fc 650 SUPERFAMILY SSF46548 219 348 1.55E-21 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 LT40_RS17520 97def45690f3d02d50815f77cc30e1fc 650 Pfam PF13183 4Fe-4S dicluster domain 242 332 1.7E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LT40_RS17520 97def45690f3d02d50815f77cc30e1fc 650 Gene3D G3DSA:1.10.1060.10 223 350 2.7E-27 T 23-04-2016 LT40_RS17520 97def45690f3d02d50815f77cc30e1fc 650 PANTHER PTHR11921:SF22 217 630 2.4E-170 T 23-04-2016 LT40_RS17520 97def45690f3d02d50815f77cc30e1fc 650 Pfam PF11982 Domain of unknown function (DUF3483) 4 220 1.4E-90 T 23-04-2016 IPR021872 Protein of unknown function DUF3483 LT40_RS03385 ea45398a74bf115ed0481b6644b5db5f 209 PANTHER PTHR30086:SF3 3 208 2.1E-44 T 23-04-2016 LT40_RS03385 ea45398a74bf115ed0481b6644b5db5f 209 PIRSF PIRSF006324 1 207 5.4E-47 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS03385 ea45398a74bf115ed0481b6644b5db5f 209 PANTHER PTHR30086 3 208 2.1E-44 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS03385 ea45398a74bf115ed0481b6644b5db5f 209 Pfam PF01810 LysE type translocator 17 203 8.9E-35 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS11455 61e46fa155d9c52a28ad72fd4c8ff359 110 PANTHER PTHR40588 11 109 6.3E-19 T 23-04-2016 LT40_RS11455 61e46fa155d9c52a28ad72fd4c8ff359 110 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 19 109 4.9E-27 T 23-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin LT40_RS11455 61e46fa155d9c52a28ad72fd4c8ff359 110 SUPERFAMILY SSF143011 19 108 6.28E-21 T 23-04-2016 LT40_RS11455 61e46fa155d9c52a28ad72fd4c8ff359 110 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 19 108 1.8E-22 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family LT40_RS09195 2e86707d24f260dbd7ad12a33d542834 298 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 277 2.9E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09195 2e86707d24f260dbd7ad12a33d542834 298 Gene3D G3DSA:3.40.50.720 5 199 6.9E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09195 2e86707d24f260dbd7ad12a33d542834 298 SUPERFAMILY SSF51735 5 296 1.89E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09195 2e86707d24f260dbd7ad12a33d542834 298 Gene3D G3DSA:3.90.25.10 200 294 3.4E-12 T 23-04-2016 LT40_RS09195 2e86707d24f260dbd7ad12a33d542834 298 PANTHER PTHR10366:SF325 7 295 1.5E-111 T 23-04-2016 LT40_RS09195 2e86707d24f260dbd7ad12a33d542834 298 PANTHER PTHR10366 7 295 1.5E-111 T 23-04-2016 LT40_RS01360 b7ab2b83ecc5c70067421b90f0cebac9 323 SUPERFAMILY SSF144083 259 320 9.02E-17 T 23-04-2016 LT40_RS01360 b7ab2b83ecc5c70067421b90f0cebac9 323 PANTHER PTHR21535:SF33 33 323 7.2E-51 T 23-04-2016 LT40_RS01360 b7ab2b83ecc5c70067421b90f0cebac9 323 Pfam PF01544 CorA-like Mg2+ transporter protein 33 317 2.1E-54 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 LT40_RS01360 b7ab2b83ecc5c70067421b90f0cebac9 323 SUPERFAMILY SSF143865 4 250 6.41E-67 T 23-04-2016 LT40_RS01360 b7ab2b83ecc5c70067421b90f0cebac9 323 PANTHER PTHR21535 33 323 7.2E-51 T 23-04-2016 LT40_RS01360 b7ab2b83ecc5c70067421b90f0cebac9 323 Gene3D G3DSA:1.20.58.340 133 244 2.0E-34 T 23-04-2016 LT40_RS01360 b7ab2b83ecc5c70067421b90f0cebac9 323 Gene3D G3DSA:1.20.58.340 249 323 7.7E-23 T 23-04-2016 LT40_RS01360 b7ab2b83ecc5c70067421b90f0cebac9 323 Gene3D G3DSA:3.30.460.20 5 132 9.3E-33 T 23-04-2016 LT40_RS16685 5e1ce501d11783ea0340a314bd365d2a 86 PANTHER PTHR38040:SF1 2 83 2.2E-28 T 23-04-2016 LT40_RS16685 5e1ce501d11783ea0340a314bd365d2a 86 PANTHER PTHR38040 2 83 2.2E-28 T 23-04-2016 LT40_RS16685 5e1ce501d11783ea0340a314bd365d2a 86 Pfam PF04380 Membrane fusogenic activity 5 79 4.1E-24 T 23-04-2016 IPR007475 Membrane fusogenic activity LT40_RS11995 469f5daf7533e73767fcf4b932e98609 297 Gene3D G3DSA:3.40.190.10 93 186 1.1E-16 T 23-04-2016 LT40_RS11995 469f5daf7533e73767fcf4b932e98609 297 Gene3D G3DSA:3.40.190.10 187 258 9.5E-4 T 23-04-2016 LT40_RS11995 469f5daf7533e73767fcf4b932e98609 297 SUPERFAMILY SSF46785 7 91 2.55E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11995 469f5daf7533e73767fcf4b932e98609 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.2E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11995 469f5daf7533e73767fcf4b932e98609 297 PANTHER PTHR30126:SF16 6 290 1.4E-145 T 23-04-2016 LT40_RS11995 469f5daf7533e73767fcf4b932e98609 297 Pfam PF03466 LysR substrate binding domain 92 294 1.8E-33 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS11995 469f5daf7533e73767fcf4b932e98609 297 Gene3D G3DSA:1.10.10.10 7 91 7.6E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11995 469f5daf7533e73767fcf4b932e98609 297 SUPERFAMILY SSF53850 93 295 7.45E-33 T 23-04-2016 LT40_RS11995 469f5daf7533e73767fcf4b932e98609 297 PANTHER PTHR30126 6 290 1.4E-145 T 23-04-2016 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR00418 DNA topoisomerase II family signature 566 582 1.2E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR00418 DNA topoisomerase II family signature 35 50 1.2E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR00418 DNA topoisomerase II family signature 521 533 1.2E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR00418 DNA topoisomerase II family signature 270 283 1.2E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR00418 DNA topoisomerase II family signature 501 518 1.2E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR00418 DNA topoisomerase II family signature 418 432 1.2E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.2E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR00418 DNA topoisomerase II family signature 70 83 1.2E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR00418 DNA topoisomerase II family signature 483 499 1.2E-58 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 SMART SM00387 31 177 4.6E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 562 624 5.5E-24 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PANTHER PTHR10169:SF45 7 633 0.0 T 23-04-2016 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PANTHER PTHR10169 7 633 0.0 T 23-04-2016 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 6.7E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 SUPERFAMILY SSF54211 221 386 1.12E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 Gene3D G3DSA:3.30.230.10 220 394 6.0E-44 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 Gene3D G3DSA:3.30.565.10 19 219 2.8E-74 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 Pfam PF01751 Toprim domain 417 526 3.0E-13 T 23-04-2016 IPR006171 Toprim domain LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 SMART SM00433 38 628 5.1E-204 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 Gene3D G3DSA:3.40.50.670 402 615 9.5E-78 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 ProSitePatterns PS00177 DNA topoisomerase II signature. 420 428 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 SUPERFAMILY SSF55874 9 219 6.03E-66 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 6 632 46.677 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 SUPERFAMILY SSF56719 392 625 2.12E-76 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 139 153 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 588 602 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 178 195 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 30 43 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 452 473 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 196 217 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 298 314 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 366 391 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 342 365 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 153 168 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 473 485 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 242 265 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 315 330 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 541 563 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 PRINTS PR01098 Topoisomerase IV subunit B signature 507 523 3.4E-114 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 Pfam PF00204 DNA gyrase B 249 389 1.6E-37 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS13965 07959f0edc887d1d55b3562444e634fd 634 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 8 628 0.0 T 23-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS01445 f3987d288092c2ad24f6dfc2e45fa26a 436 Gene3D G3DSA:1.20.1250.20 247 430 4.4E-24 T 23-04-2016 LT40_RS01445 f3987d288092c2ad24f6dfc2e45fa26a 436 Gene3D G3DSA:1.20.1250.20 21 223 4.1E-22 T 23-04-2016 LT40_RS01445 f3987d288092c2ad24f6dfc2e45fa26a 436 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS01445 f3987d288092c2ad24f6dfc2e45fa26a 436 Pfam PF00083 Sugar (and other) transporter 24 224 1.5E-21 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS01445 f3987d288092c2ad24f6dfc2e45fa26a 436 Pfam PF07690 Major Facilitator Superfamily 268 427 2.4E-10 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS01445 f3987d288092c2ad24f6dfc2e45fa26a 436 PANTHER PTHR23508 21 434 3.1E-133 T 23-04-2016 LT40_RS01445 f3987d288092c2ad24f6dfc2e45fa26a 436 PANTHER PTHR23508:SF11 21 434 3.1E-133 T 23-04-2016 LT40_RS01445 f3987d288092c2ad24f6dfc2e45fa26a 436 SUPERFAMILY SSF103473 16 433 6.8E-65 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS20970 853da08c2df17e0099c3d5c907ce30fd 221 TIGRFAM TIGR02646 TIGR02646: TIGR02646 family protein 42 166 7.5E-17 T 23-04-2016 IPR013467 Conserved hypothetical protein CHP02646 LT40_RS20970 853da08c2df17e0099c3d5c907ce30fd 221 SMART SM00507 47 103 2.9E-5 T 23-04-2016 IPR003615 HNH nuclease LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 Gene3D G3DSA:2.40.110.10 127 224 1.7E-41 T 23-04-2016 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 223 2.5E-27 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 PIRSF PIRSF016578 15 393 2.2E-18 T 23-04-2016 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 PANTHER PTHR10909:SF326 7 393 2.7E-259 T 23-04-2016 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 Gene3D G3DSA:1.10.540.10 6 126 3.7E-42 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 PANTHER PTHR10909 7 393 2.7E-259 T 23-04-2016 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 SUPERFAMILY SSF56645 8 248 3.8E-87 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 388 5.7E-38 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 130 142 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 SUPERFAMILY SSF47203 233 391 5.8E-44 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 13 124 2.9E-37 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS06865 e8e1e10a36d4c2b234ad0f49efecfa18 393 Gene3D G3DSA:1.20.140.10 225 391 2.6E-61 T 23-04-2016 LT40_RS14040 416c8ce8995c3d98d9533d3925e9b527 238 PANTHER PTHR10992 5 238 5.8E-15 T 23-04-2016 LT40_RS14040 416c8ce8995c3d98d9533d3925e9b527 238 PANTHER PTHR10992:SF812 5 238 5.8E-15 T 23-04-2016 LT40_RS14040 416c8ce8995c3d98d9533d3925e9b527 238 Pfam PF12697 Alpha/beta hydrolase family 6 229 5.2E-9 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS14040 416c8ce8995c3d98d9533d3925e9b527 238 Gene3D G3DSA:3.40.50.1820 5 237 4.1E-26 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS14040 416c8ce8995c3d98d9533d3925e9b527 238 SUPERFAMILY SSF53474 5 236 5.18E-24 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS13360 2bb096db766a32ac241f30d631ee89c0 288 PRINTS PR01483 Fatty acid synthase signature 184 206 2.3E-7 T 23-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 LT40_RS13360 2bb096db766a32ac241f30d631ee89c0 288 PRINTS PR01483 Fatty acid synthase signature 206 227 2.3E-7 T 23-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 LT40_RS13360 2bb096db766a32ac241f30d631ee89c0 288 Gene3D G3DSA:3.10.129.10 177 268 8.3E-24 T 23-04-2016 IPR029069 HotDog domain LT40_RS13360 2bb096db766a32ac241f30d631ee89c0 288 Pfam PF01575 MaoC like domain 185 259 1.2E-16 T 23-04-2016 IPR002539 MaoC-like domain LT40_RS13360 2bb096db766a32ac241f30d631ee89c0 288 PANTHER PTHR13078:SF54 1 283 1.9E-90 T 23-04-2016 LT40_RS13360 2bb096db766a32ac241f30d631ee89c0 288 PANTHER PTHR13078 1 283 1.9E-90 T 23-04-2016 LT40_RS13360 2bb096db766a32ac241f30d631ee89c0 288 SUPERFAMILY SSF54637 177 263 1.33E-19 T 23-04-2016 IPR029069 HotDog domain LT40_RS05350 13da93899a42b8d476051f6237d455e5 348 PANTHER PTHR11647 1 317 8.2E-161 T 23-04-2016 LT40_RS05350 13da93899a42b8d476051f6237d455e5 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 12 20 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS05350 13da93899a42b8d476051f6237d455e5 348 PIRSF PIRSF001237 1 346 9.4E-138 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS05350 13da93899a42b8d476051f6237d455e5 348 Hamap MF_00219 Dihydroorotase [pyrC]. 3 344 42.867 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS05350 13da93899a42b8d476051f6237d455e5 348 Gene3D G3DSA:3.20.20.140 2 343 3.7E-131 T 23-04-2016 LT40_RS05350 13da93899a42b8d476051f6237d455e5 348 SUPERFAMILY SSF51556 3 343 2.72E-143 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS05350 13da93899a42b8d476051f6237d455e5 348 PANTHER PTHR11647:SF59 1 317 8.2E-161 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS05350 13da93899a42b8d476051f6237d455e5 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 246 257 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS05350 13da93899a42b8d476051f6237d455e5 348 Pfam PF01979 Amidohydrolase family 12 311 1.7E-16 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LT40_RS05350 13da93899a42b8d476051f6237d455e5 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 5 343 2.8E-136 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS00135 d206e208899fbc5522d801a7bfb9e02e 1032 Pfam PF00912 Transglycosylase 156 352 1.6E-26 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 LT40_RS00135 d206e208899fbc5522d801a7bfb9e02e 1032 SUPERFAMILY SSF56601 840 1019 7.52E-29 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS00135 d206e208899fbc5522d801a7bfb9e02e 1032 SUPERFAMILY SSF56601 429 455 7.52E-29 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS00135 d206e208899fbc5522d801a7bfb9e02e 1032 SUPERFAMILY SSF56601 554 672 7.52E-29 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS00135 d206e208899fbc5522d801a7bfb9e02e 1032 SUPERFAMILY SSF53955 164 319 2.53E-9 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS00135 d206e208899fbc5522d801a7bfb9e02e 1032 Gene3D G3DSA:1.10.3810.10 165 321 5.6E-8 T 23-04-2016 LT40_RS00135 d206e208899fbc5522d801a7bfb9e02e 1032 Gene3D G3DSA:3.40.710.10 842 1002 5.6E-42 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS00135 d206e208899fbc5522d801a7bfb9e02e 1032 Gene3D G3DSA:3.40.710.10 576 674 5.6E-42 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS00135 d206e208899fbc5522d801a7bfb9e02e 1032 Gene3D G3DSA:3.40.710.10 411 528 5.6E-42 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS12300 732a8d51217cdbf660ecc1c2ef56e400 117 Pfam PF00576 HIUase/Transthyretin family 4 116 4.4E-35 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily LT40_RS12300 732a8d51217cdbf660ecc1c2ef56e400 117 PANTHER PTHR10395 1 117 1.6E-43 T 23-04-2016 LT40_RS12300 732a8d51217cdbf660ecc1c2ef56e400 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 2.3E-39 T 23-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 LT40_RS12300 732a8d51217cdbf660ecc1c2ef56e400 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 23-04-2016 IPR023419 Transthyretin, conserved site LT40_RS12300 732a8d51217cdbf660ecc1c2ef56e400 117 SUPERFAMILY SSF49472 1 117 5.76E-41 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily LT40_RS12300 732a8d51217cdbf660ecc1c2ef56e400 117 Gene3D G3DSA:2.60.40.180 2 117 3.6E-37 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily LT40_RS12300 732a8d51217cdbf660ecc1c2ef56e400 117 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 23-04-2016 IPR023418 Transthyretin, thyroxine binding site LT40_RS12300 732a8d51217cdbf660ecc1c2ef56e400 117 PRINTS PR00189 Transthyretin signature 3 23 3.7E-9 T 23-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase LT40_RS12300 732a8d51217cdbf660ecc1c2ef56e400 117 PRINTS PR00189 Transthyretin signature 95 117 3.7E-9 T 23-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase LT40_RS12300 732a8d51217cdbf660ecc1c2ef56e400 117 PANTHER PTHR10395:SF7 1 117 1.6E-43 T 23-04-2016 LT40_RS07945 af28ad507f8f0e99900e44d9ffc7b5bc 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 351 3.1E-86 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LT40_RS07945 af28ad507f8f0e99900e44d9ffc7b5bc 374 PANTHER PTHR22893:SF24 1 370 1.0E-173 T 23-04-2016 LT40_RS07945 af28ad507f8f0e99900e44d9ffc7b5bc 374 SUPERFAMILY SSF51395 4 372 2.22E-121 T 23-04-2016 LT40_RS07945 af28ad507f8f0e99900e44d9ffc7b5bc 374 Gene3D G3DSA:3.20.20.70 5 371 4.0E-131 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS07945 af28ad507f8f0e99900e44d9ffc7b5bc 374 PANTHER PTHR22893 1 370 1.0E-173 T 23-04-2016 LT40_RS07685 032847fb2843b5ccc278867d81d936d2 705 PANTHER PTHR32552 52 705 1.8E-169 T 23-04-2016 LT40_RS07685 032847fb2843b5ccc278867d81d936d2 705 SUPERFAMILY SSF56935 26 705 3.14E-114 T 23-04-2016 LT40_RS07685 032847fb2843b5ccc278867d81d936d2 705 Pfam PF00593 TonB dependent receptor 466 704 1.4E-36 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS07685 032847fb2843b5ccc278867d81d936d2 705 PANTHER PTHR32552:SF6 22 33 1.8E-169 T 23-04-2016 LT40_RS07685 032847fb2843b5ccc278867d81d936d2 705 PANTHER PTHR32552:SF6 52 705 1.8E-169 T 23-04-2016 LT40_RS07685 032847fb2843b5ccc278867d81d936d2 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 158 9.7E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS07685 032847fb2843b5ccc278867d81d936d2 705 Gene3D G3DSA:2.40.170.20 173 705 1.2E-130 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS07685 032847fb2843b5ccc278867d81d936d2 705 Gene3D G3DSA:2.170.130.10 31 168 5.6E-27 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS07685 032847fb2843b5ccc278867d81d936d2 705 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 64 705 2.1E-99 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS07685 032847fb2843b5ccc278867d81d936d2 705 PANTHER PTHR32552 22 33 1.8E-169 T 23-04-2016 LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 Gene3D G3DSA:3.40.710.10 651 791 1.6E-130 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 Gene3D G3DSA:3.40.710.10 419 608 1.6E-130 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 Gene3D G3DSA:3.40.710.10 233 314 1.6E-130 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 Pfam PF17092 Penicillin-binding protein OB-like domain 317 422 2.5E-24 T 23-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 PANTHER PTHR32282 418 609 3.6E-263 T 23-04-2016 LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 PANTHER PTHR32282 650 813 3.6E-263 T 23-04-2016 LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 Gene3D G3DSA:1.10.3810.10 56 232 6.5E-70 T 23-04-2016 LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 SUPERFAMILY SSF53955 44 255 1.38E-74 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 PANTHER PTHR32282:SF5 3 311 3.6E-263 T 23-04-2016 LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 PANTHER PTHR32282:SF5 650 813 3.6E-263 T 23-04-2016 LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 Pfam PF00905 Penicillin binding protein transpeptidase domain 426 706 8.7E-31 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 SUPERFAMILY SSF56601 650 792 1.83E-124 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 SUPERFAMILY SSF56601 419 607 1.83E-124 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 SUPERFAMILY SSF56601 212 234 1.83E-124 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 SUPERFAMILY SSF56601 263 314 1.83E-124 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 PANTHER PTHR32282 3 311 3.6E-263 T 23-04-2016 LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 Pfam PF00912 Transglycosylase 56 230 1.0E-62 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 Gene3D G3DSA:2.40.50.140 344 418 1.5E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 744 1.8E-179 T 23-04-2016 LT40_RS14240 54087710d02c1f630d5a55c233f1f836 815 PANTHER PTHR32282:SF5 418 609 3.6E-263 T 23-04-2016 LT40_RS07675 5d922fdf01bbffaa4bf6f1b10b3fdf70 530 Gene3D G3DSA:3.30.70.270 104 267 1.6E-43 T 23-04-2016 LT40_RS07675 5d922fdf01bbffaa4bf6f1b10b3fdf70 530 SUPERFAMILY SSF141868 278 514 6.41E-70 T 23-04-2016 IPR001633 EAL domain LT40_RS07675 5d922fdf01bbffaa4bf6f1b10b3fdf70 530 SMART SM00052 270 513 7.1E-74 T 23-04-2016 IPR001633 EAL domain LT40_RS07675 5d922fdf01bbffaa4bf6f1b10b3fdf70 530 PANTHER PTHR33121 250 508 2.7E-55 T 23-04-2016 LT40_RS07675 5d922fdf01bbffaa4bf6f1b10b3fdf70 530 PANTHER PTHR33121:SF13 250 508 2.7E-55 T 23-04-2016 LT40_RS07675 5d922fdf01bbffaa4bf6f1b10b3fdf70 530 Pfam PF00563 EAL domain 277 508 5.0E-58 T 23-04-2016 IPR001633 EAL domain LT40_RS07675 5d922fdf01bbffaa4bf6f1b10b3fdf70 530 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 99 258 3.0E-33 T 23-04-2016 IPR000160 GGDEF domain LT40_RS07675 5d922fdf01bbffaa4bf6f1b10b3fdf70 530 Gene3D G3DSA:3.20.20.450 276 518 1.3E-69 T 23-04-2016 IPR001633 EAL domain LT40_RS07675 5d922fdf01bbffaa4bf6f1b10b3fdf70 530 SMART SM00267 91 260 4.8E-40 T 23-04-2016 IPR000160 GGDEF domain LT40_RS07675 5d922fdf01bbffaa4bf6f1b10b3fdf70 530 Pfam PF00990 Diguanylate cyclase, GGDEF domain 102 255 2.3E-36 T 23-04-2016 IPR000160 GGDEF domain LT40_RS07675 5d922fdf01bbffaa4bf6f1b10b3fdf70 530 SUPERFAMILY SSF55073 107 262 8.11E-39 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS11440 68beafae5654e98aeda4754361fc7899 337 Gene3D G3DSA:3.40.50.720 142 304 1.9E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11440 68beafae5654e98aeda4754361fc7899 337 Pfam PF00107 Zinc-binding dehydrogenase 163 272 7.8E-17 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LT40_RS11440 68beafae5654e98aeda4754361fc7899 337 Gene3D G3DSA:3.90.180.10 3 141 4.1E-26 T 23-04-2016 IPR011032 GroES-like LT40_RS11440 68beafae5654e98aeda4754361fc7899 337 SUPERFAMILY SSF50129 3 155 2.43E-28 T 23-04-2016 IPR011032 GroES-like LT40_RS11440 68beafae5654e98aeda4754361fc7899 337 PANTHER PTHR11695 16 337 4.7E-92 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS11440 68beafae5654e98aeda4754361fc7899 337 SMART SM00829 11 335 2.3E-11 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LT40_RS11440 68beafae5654e98aeda4754361fc7899 337 SUPERFAMILY SSF51735 118 275 5.66E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11440 68beafae5654e98aeda4754361fc7899 337 PANTHER PTHR11695:SF605 16 337 4.7E-92 T 23-04-2016 LT40_RS11440 68beafae5654e98aeda4754361fc7899 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 92 4.9E-10 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 PANTHER PTHR10357:SF110 10 449 2.0E-111 T 23-04-2016 LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 PANTHER PTHR10357:SF110 481 558 2.0E-111 T 23-04-2016 LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 Pfam PF11941 Domain of unknown function (DUF3459) 496 573 2.2E-14 T 23-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 SMART SM00642 113 465 1.7E-8 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 SUPERFAMILY SSF81296 12 96 2.45E-17 T 23-04-2016 IPR014756 Immunoglobulin E-set LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 Gene3D G3DSA:3.20.20.80 101 427 6.3E-80 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 Gene3D G3DSA:3.20.20.80 468 504 6.3E-80 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 Pfam PF00128 Alpha amylase, catalytic domain 125 214 9.2E-14 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 Pfam PF00128 Alpha amylase, catalytic domain 229 423 2.7E-5 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 Gene3D G3DSA:2.60.40.10 12 96 8.8E-26 T 23-04-2016 IPR013783 Immunoglobulin-like fold LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 PIRSF PIRSF006337 7 581 4.0E-223 T 23-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 SUPERFAMILY SSF51445 93 506 7.83E-107 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 PANTHER PTHR10357 10 449 2.0E-111 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 PANTHER PTHR10357 481 558 2.0E-111 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11040 9fb62c09b298ab63a2bfe2b986bf0819 596 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 22 553 3.5E-204 T 23-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 SUPERFAMILY SSF52540 140 384 3.03E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 Pfam PF02954 Bacterial regulatory protein, Fis family 424 463 6.9E-13 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 PANTHER PTHR32071 1 476 6.5E-249 T 23-04-2016 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 446 2.5E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 446 466 2.5E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 Gene3D G3DSA:1.10.8.60 314 386 2.8E-22 T 23-04-2016 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 PANTHER PTHR32071:SF15 1 476 6.5E-249 T 23-04-2016 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 SUPERFAMILY SSF52172 5 186 2.56E-42 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 SUPERFAMILY SSF46689 381 465 1.21E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 Pfam PF00072 Response regulator receiver domain 7 115 5.0E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 Pfam PF00158 Sigma-54 interaction domain 141 308 9.9E-70 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 SMART SM00448 5 116 3.8E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 SMART SM00382 161 304 1.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 463 4.0E-239 T 23-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 Gene3D G3DSA:1.10.10.60 398 466 9.1E-22 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 Gene3D G3DSA:3.40.50.2300 6 128 9.0E-35 T 23-04-2016 LT40_RS14465 d971553b34e00949d061ee665a6251ad 478 Gene3D G3DSA:3.40.50.300 138 312 1.2E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06680 0fdf68872f6860fee3d4d9d11b6a4cd7 203 SUPERFAMILY SSF52540 13 202 1.74E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06680 0fdf68872f6860fee3d4d9d11b6a4cd7 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 32 202 1.3E-62 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 LT40_RS06680 0fdf68872f6860fee3d4d9d11b6a4cd7 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 34 202 5.8E-56 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 LT40_RS06680 0fdf68872f6860fee3d4d9d11b6a4cd7 203 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 1 26 5.5E-8 T 23-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 LT40_RS06680 0fdf68872f6860fee3d4d9d11b6a4cd7 203 PIRSF PIRSF015617 6 203 2.4E-68 T 23-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 LT40_RS06680 0fdf68872f6860fee3d4d9d11b6a4cd7 203 Gene3D G3DSA:3.40.50.300 8 202 9.5E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06680 0fdf68872f6860fee3d4d9d11b6a4cd7 203 PANTHER PTHR30069 5 203 1.4E-58 T 23-04-2016 LT40_RS10655 f876d194735a1b2c65ae95fa9eca1ff3 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 293 1.4E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10655 f876d194735a1b2c65ae95fa9eca1ff3 297 PANTHER PTHR30425:SF0 12 294 5.7E-92 T 23-04-2016 LT40_RS10655 f876d194735a1b2c65ae95fa9eca1ff3 297 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 294 7.3E-78 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 LT40_RS10655 f876d194735a1b2c65ae95fa9eca1ff3 297 SUPERFAMILY SSF161098 35 288 1.23E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10655 f876d194735a1b2c65ae95fa9eca1ff3 297 PANTHER PTHR30425 12 294 5.7E-92 T 23-04-2016 LT40_RS10655 f876d194735a1b2c65ae95fa9eca1ff3 297 Gene3D G3DSA:1.10.3720.10 26 292 3.1E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09050 6b7615652cb250cf2a4c8f7062f3c143 361 PANTHER PTHR10366:SF41 7 356 1.7E-180 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LT40_RS09050 6b7615652cb250cf2a4c8f7062f3c143 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 329 1.2E-98 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09050 6b7615652cb250cf2a4c8f7062f3c143 361 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 7 342 1.8E-153 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LT40_RS09050 6b7615652cb250cf2a4c8f7062f3c143 361 SUPERFAMILY SSF51735 5 354 5.63E-93 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09050 6b7615652cb250cf2a4c8f7062f3c143 361 PANTHER PTHR10366 7 356 1.7E-180 T 23-04-2016 LT40_RS09050 6b7615652cb250cf2a4c8f7062f3c143 361 Gene3D G3DSA:3.40.50.720 7 195 3.4E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09050 6b7615652cb250cf2a4c8f7062f3c143 361 Gene3D G3DSA:3.90.25.10 196 353 4.9E-57 T 23-04-2016 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 SMART SM00448 788 904 1.1E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 SMART SM00448 640 759 1.2E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 Pfam PF07695 7TM diverse intracellular signalling 171 370 3.6E-22 T 23-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 Pfam PF07696 7TMR-DISM extracellular 2 31 159 8.2E-15 T 23-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 SMART SM00388 396 461 2.4E-23 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 Gene3D G3DSA:1.10.287.130 394 457 2.9E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 SMART SM00387 508 623 3.7E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 508 622 1.2E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 Pfam PF00512 His Kinase A (phospho-acceptor) domain 396 461 1.2E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 SUPERFAMILY SSF47384 392 462 1.65E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 PANTHER PTHR24423:SF490 372 636 1.4E-131 T 23-04-2016 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 PANTHER PTHR24423:SF490 787 912 1.4E-131 T 23-04-2016 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 PANTHER PTHR24423:SF490 2 22 1.4E-131 T 23-04-2016 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 Gene3D G3DSA:3.30.565.10 462 624 5.9E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 Gene3D G3DSA:3.40.50.2300 638 761 8.4E-28 T 23-04-2016 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 PANTHER PTHR24423 372 636 1.4E-131 T 23-04-2016 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 PANTHER PTHR24423 2 22 1.4E-131 T 23-04-2016 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 PANTHER PTHR24423 787 912 1.4E-131 T 23-04-2016 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 Pfam PF00072 Response regulator receiver domain 790 904 1.4E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 Pfam PF00072 Response regulator receiver domain 642 758 7.0E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 Gene3D G3DSA:3.40.50.2300 787 911 4.3E-39 T 23-04-2016 LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 SUPERFAMILY SSF52172 638 765 3.84E-28 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 SUPERFAMILY SSF55874 450 621 1.05E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13485 38a9e3d23cfb74bf4da567cf75fe6cfe 921 SUPERFAMILY SSF52172 786 907 3.42E-35 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10610 976d6cffb06420f245ae61aae4b723c6 303 PANTHER PTHR10584 1 298 6.9E-69 T 23-04-2016 LT40_RS10610 976d6cffb06420f245ae61aae4b723c6 303 Pfam PF00294 pfkB family carbohydrate kinase 5 288 3.0E-40 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB LT40_RS10610 976d6cffb06420f245ae61aae4b723c6 303 PANTHER PTHR10584:SF161 1 298 6.9E-69 T 23-04-2016 LT40_RS10610 976d6cffb06420f245ae61aae4b723c6 303 SUPERFAMILY SSF53613 4 296 1.25E-58 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS10610 976d6cffb06420f245ae61aae4b723c6 303 Gene3D G3DSA:3.40.1190.20 4 299 7.8E-60 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 PANTHER PTHR30560 1 429 2.3E-129 T 23-04-2016 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 PANTHER PTHR30560:SF3 1 429 2.3E-129 T 23-04-2016 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 Gene3D G3DSA:3.10.50.40 151 213 3.4E-8 T 23-04-2016 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 SUPERFAMILY SSF54534 89 241 1.43E-31 T 23-04-2016 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 411 7.9E-37 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 SUPERFAMILY SSF102735 1 129 1.31E-39 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 236 5.3E-12 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 Pfam PF05697 Bacterial trigger factor protein (TF) 1 142 5.6E-41 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 Gene3D G3DSA:1.10.3120.10 214 388 1.5E-60 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 TIGRFAM TIGR00115 tig: trigger factor 11 410 7.5E-139 T 23-04-2016 IPR005215 Trigger factor GO:0015031 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 Gene3D G3DSA:3.30.70.1050 1 117 3.1E-40 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 SUPERFAMILY SSF109998 248 428 2.35E-48 T 23-04-2016 IPR027304 Trigger factor/SurA domain LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 PIRSF PIRSF003095 1 433 4.7E-123 T 23-04-2016 IPR005215 Trigger factor GO:0015031 LT40_RS02095 dcb3a94a2270b48d80d1157aaf054873 436 Hamap MF_00303 Trigger factor [tig]. 1 417 21.386 T 23-04-2016 IPR005215 Trigger factor GO:0015031 LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 Gene3D G3DSA:3.30.565.10 95 249 3.1E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 Gene3D G3DSA:1.10.287.130 21 88 2.3E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 Pfam PF00512 His Kinase A (phospho-acceptor) domain 30 91 7.8E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 PANTHER PTHR24423 1 249 1.3E-66 T 23-04-2016 LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 SUPERFAMILY SSF55874 81 249 3.14E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 PRINTS PR00344 Bacterial sensor protein C-terminal signature 235 248 1.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 PRINTS PR00344 Bacterial sensor protein C-terminal signature 175 189 1.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 PRINTS PR00344 Bacterial sensor protein C-terminal signature 210 228 1.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 PRINTS PR00344 Bacterial sensor protein C-terminal signature 193 203 1.0E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 SUPERFAMILY SSF47384 16 93 2.35E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 138 248 4.6E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 SMART SM00387 138 251 3.1E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01425 a9eca324c24eeaf6a3c2f2df31bbc892 252 SMART SM00388 28 92 3.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS16530 67c19b00f42d930943c44ee0747c8c3e 151 Gene3D G3DSA:2.70.40.10 6 150 4.1E-52 T 23-04-2016 IPR029054 dUTPase-like LT40_RS16530 67c19b00f42d930943c44ee0747c8c3e 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 149 2.9E-47 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 LT40_RS16530 67c19b00f42d930943c44ee0747c8c3e 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 32.652 T 23-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 LT40_RS16530 67c19b00f42d930943c44ee0747c8c3e 151 Pfam PF00692 dUTPase 17 149 9.3E-40 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 LT40_RS16530 67c19b00f42d930943c44ee0747c8c3e 151 SUPERFAMILY SSF51283 2 150 1.7E-52 T 23-04-2016 IPR029054 dUTPase-like LT40_RS16530 67c19b00f42d930943c44ee0747c8c3e 151 PANTHER PTHR11241 1 150 2.0E-50 T 23-04-2016 LT40_RS05025 0dac6245f2f1cee4c49d98c22317c34c 295 PANTHER PTHR10120:SF19 1 293 3.5E-94 T 23-04-2016 LT40_RS05025 0dac6245f2f1cee4c49d98c22317c34c 295 Gene3D G3DSA:3.30.2010.10 77 164 1.5E-30 T 23-04-2016 LT40_RS05025 0dac6245f2f1cee4c49d98c22317c34c 295 PANTHER PTHR10120 1 293 3.5E-94 T 23-04-2016 LT40_RS05025 0dac6245f2f1cee4c49d98c22317c34c 295 Hamap MF_00188 Protease HtpX [htpX]. 1 294 25.184 T 23-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 LT40_RS05025 0dac6245f2f1cee4c49d98c22317c34c 295 Pfam PF01435 Peptidase family M48 82 294 2.5E-38 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LT40_RS18060 ef2092ceddf88df797bcd4b1853b92e8 640 SMART SM00763 19 376 2.3E-213 T 23-04-2016 IPR013153 PrkA AAA domain LT40_RS18060 ef2092ceddf88df797bcd4b1853b92e8 640 SUPERFAMILY SSF52540 75 363 2.28E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18060 ef2092ceddf88df797bcd4b1853b92e8 640 PIRSF PIRSF000549 1 640 2.3E-285 T 23-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 LT40_RS18060 ef2092ceddf88df797bcd4b1853b92e8 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 1.6E-75 T 23-04-2016 IPR010650 PrkA C-terminal domain LT40_RS18060 ef2092ceddf88df797bcd4b1853b92e8 640 Gene3D G3DSA:3.40.50.300 239 325 1.6E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18060 ef2092ceddf88df797bcd4b1853b92e8 640 Gene3D G3DSA:3.40.50.300 75 154 1.6E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18060 ef2092ceddf88df797bcd4b1853b92e8 640 PANTHER PTHR30267 1 640 4.9E-285 T 23-04-2016 LT40_RS18060 ef2092ceddf88df797bcd4b1853b92e8 640 PANTHER PTHR30267:SF2 1 640 4.9E-285 T 23-04-2016 LT40_RS18060 ef2092ceddf88df797bcd4b1853b92e8 640 Pfam PF08298 PrkA AAA domain 20 376 7.0E-180 T 23-04-2016 IPR013153 PrkA AAA domain LT40_RS06085 1a3ba9588bfe7d7c89b283a816ecc99d 98 PANTHER PTHR12735:SF3 2 98 6.7E-30 T 23-04-2016 LT40_RS06085 1a3ba9588bfe7d7c89b283a816ecc99d 98 SUPERFAMILY SSF82657 3 84 1.05E-27 T 23-04-2016 IPR002634 BolA protein LT40_RS06085 1a3ba9588bfe7d7c89b283a816ecc99d 98 PIRSF PIRSF003113 1 95 1.4E-30 T 23-04-2016 IPR002634 BolA protein LT40_RS06085 1a3ba9588bfe7d7c89b283a816ecc99d 98 PANTHER PTHR12735 2 98 6.7E-30 T 23-04-2016 LT40_RS06085 1a3ba9588bfe7d7c89b283a816ecc99d 98 Pfam PF01722 BolA-like protein 13 80 3.5E-24 T 23-04-2016 IPR002634 BolA protein LT40_RS06085 1a3ba9588bfe7d7c89b283a816ecc99d 98 Gene3D G3DSA:3.30.300.90 1 97 1.9E-28 T 23-04-2016 IPR002634 BolA protein LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.4E-13 T 23-04-2016 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 302 3.4E-13 T 23-04-2016 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.4E-13 T 23-04-2016 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 PIRSF PIRSF037495 2 450 8.0E-139 T 23-04-2016 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 290 308 1.1E-8 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 1.1E-8 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.1E-8 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 314 5.4E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 SUPERFAMILY SSF51905 4 324 3.02E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 Pfam PF04324 BFD-like [2Fe-2S] binding domain 371 421 1.4E-9 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 Gene3D G3DSA:3.50.50.60 4 112 1.5E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 PANTHER PTHR22912 4 446 1.9E-35 T 23-04-2016 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 PANTHER PTHR22912:SF141 4 446 1.9E-35 T 23-04-2016 LT40_RS02005 0ee60d533686da2a2da8ec9540d67895 451 Gene3D G3DSA:3.50.50.60 113 322 6.3E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS04825 435e8925913e58a3b9d783d743a90ef3 432 PANTHER PTHR30035 3 431 1.8E-222 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS04825 435e8925913e58a3b9d783d743a90ef3 432 SUPERFAMILY SSF53474 127 390 1.22E-19 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS04825 435e8925913e58a3b9d783d743a90ef3 432 Gene3D G3DSA:3.40.50.1820 369 427 5.8E-9 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS04825 435e8925913e58a3b9d783d743a90ef3 432 Gene3D G3DSA:3.40.50.1820 99 217 5.8E-9 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS04825 435e8925913e58a3b9d783d743a90ef3 432 Gene3D G3DSA:3.40.50.1820 278 279 5.8E-9 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS04825 435e8925913e58a3b9d783d743a90ef3 432 PANTHER PTHR30035:SF1 3 431 1.8E-222 T 23-04-2016 LT40_RS00475 63c7f4065ba161132df6c96a6db52516 381 PANTHER PTHR30372:SF0 1 376 6.5E-128 T 23-04-2016 LT40_RS00475 63c7f4065ba161132df6c96a6db52516 381 PANTHER PTHR30372 1 376 6.5E-128 T 23-04-2016 LT40_RS00475 63c7f4065ba161132df6c96a6db52516 381 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 377 41.718 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 LT40_RS00475 63c7f4065ba161132df6c96a6db52516 381 Gene3D G3DSA:3.40.50.2000 161 344 1.1E-8 T 23-04-2016 LT40_RS00475 63c7f4065ba161132df6c96a6db52516 381 Pfam PF02684 Lipid-A-disaccharide synthetase 9 361 1.4E-118 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 LT40_RS00475 63c7f4065ba161132df6c96a6db52516 381 SUPERFAMILY SSF53756 9 376 1.4E-38 T 23-04-2016 LT40_RS00475 63c7f4065ba161132df6c96a6db52516 381 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 375 4.7E-126 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 8.6E-22 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 PANTHER PTHR26402 2 207 3.0E-67 T 23-04-2016 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 Gene3D G3DSA:1.10.10.10 120 207 6.5E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 Pfam PF00072 Response regulator receiver domain 4 115 2.3E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 SUPERFAMILY SSF46894 141 207 9.86E-19 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 Gene3D G3DSA:3.40.50.2300 2 119 1.7E-34 T 23-04-2016 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 SMART SM00448 2 114 6.4E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 SMART SM00421 145 202 1.1E-20 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 SUPERFAMILY SSF52172 2 133 1.14E-33 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 PANTHER PTHR26402:SF151 2 207 3.0E-67 T 23-04-2016 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.5E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.5E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS05370 dbabc05b0dade902c7c6506a0b31744d 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.5E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS01995 c61e2c86fe7ee92a3a8d99cfc42cbc08 346 Gene3D G3DSA:3.40.190.10 1 125 2.1E-22 T 23-04-2016 LT40_RS01995 c61e2c86fe7ee92a3a8d99cfc42cbc08 346 Gene3D G3DSA:3.40.190.10 272 336 2.1E-22 T 23-04-2016 LT40_RS01995 c61e2c86fe7ee92a3a8d99cfc42cbc08 346 Pfam PF13416 Bacterial extracellular solute-binding protein 46 306 1.5E-24 T 23-04-2016 LT40_RS01995 c61e2c86fe7ee92a3a8d99cfc42cbc08 346 Gene3D G3DSA:3.40.190.10 127 271 8.3E-26 T 23-04-2016 LT40_RS01995 c61e2c86fe7ee92a3a8d99cfc42cbc08 346 SUPERFAMILY SSF53850 41 342 6.14E-50 T 23-04-2016 LT40_RS01995 c61e2c86fe7ee92a3a8d99cfc42cbc08 346 PANTHER PTHR30006:SF7 1 346 2.6E-57 T 23-04-2016 LT40_RS01995 c61e2c86fe7ee92a3a8d99cfc42cbc08 346 PANTHER PTHR30006 1 346 2.6E-57 T 23-04-2016 LT40_RS02535 988e6e5c9488731700ab5fa4edc3eb4d 302 Pfam PF00691 OmpA family 151 236 4.6E-16 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS02535 988e6e5c9488731700ab5fa4edc3eb4d 302 SUPERFAMILY SSF103088 130 242 2.22E-28 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS02535 988e6e5c9488731700ab5fa4edc3eb4d 302 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 5 55 5.2E-21 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain LT40_RS02535 988e6e5c9488731700ab5fa4edc3eb4d 302 PANTHER PTHR30329 1 266 1.1E-79 T 23-04-2016 LT40_RS02535 988e6e5c9488731700ab5fa4edc3eb4d 302 PANTHER PTHR30329:SF4 1 266 1.1E-79 T 23-04-2016 LT40_RS02535 988e6e5c9488731700ab5fa4edc3eb4d 302 Gene3D G3DSA:3.30.1330.60 118 242 1.7E-28 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 Pfam PF00710 Asparaginase, N-terminal 9 180 3.7E-41 T 23-04-2016 IPR027474 L-asparaginase, N-terminal LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 Gene3D G3DSA:3.40.50.40 207 331 1.2E-37 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 PIRSF PIRSF001220 5 331 1.1E-70 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 90 100 - T 23-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 SUPERFAMILY SSF53774 6 331 2.88E-81 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 Gene3D G3DSA:3.40.50.1170 6 181 1.3E-44 T 23-04-2016 IPR027474 L-asparaginase, N-terminal LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 12 20 - T 23-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 PANTHER PTHR11707 6 331 3.2E-81 T 23-04-2016 LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 PRINTS PR00139 Asparaginase/glutaminase family signature 10 21 1.4E-14 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 PRINTS PR00139 Asparaginase/glutaminase family signature 257 275 1.4E-14 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 PRINTS PR00139 Asparaginase/glutaminase family signature 89 107 1.4E-14 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 PIRSF PIRSF500176 6 329 2.6E-77 T 23-04-2016 LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 SMART SM00870 9 320 1.5E-90 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 LT40_RS16300 9b7619aae9baa3c074c87573552715ed 332 PANTHER PTHR11707:SF3 6 331 3.2E-81 T 23-04-2016 LT40_RS04230 e92ed53f6b151e4a6b5424ff20bf9ec8 332 PANTHER PTHR10366:SF418 284 327 1.3E-73 T 23-04-2016 LT40_RS04230 e92ed53f6b151e4a6b5424ff20bf9ec8 332 PANTHER PTHR10366:SF418 2 258 1.3E-73 T 23-04-2016 LT40_RS04230 e92ed53f6b151e4a6b5424ff20bf9ec8 332 SUPERFAMILY SSF51735 1 264 1.68E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04230 e92ed53f6b151e4a6b5424ff20bf9ec8 332 SUPERFAMILY SSF51735 293 327 1.68E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04230 e92ed53f6b151e4a6b5424ff20bf9ec8 332 Gene3D G3DSA:3.40.50.720 1 320 8.5E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04230 e92ed53f6b151e4a6b5424ff20bf9ec8 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 227 1.1E-30 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LT40_RS04230 e92ed53f6b151e4a6b5424ff20bf9ec8 332 PANTHER PTHR10366 284 327 1.3E-73 T 23-04-2016 LT40_RS04230 e92ed53f6b151e4a6b5424ff20bf9ec8 332 PANTHER PTHR10366 2 258 1.3E-73 T 23-04-2016 LT40_RS00480 71fc63470443add43507201b72a4a2db 209 Pfam PF01351 Ribonuclease HII 15 191 2.9E-39 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain LT40_RS00480 71fc63470443add43507201b72a4a2db 209 SUPERFAMILY SSF53098 12 197 2.12E-68 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS00480 71fc63470443add43507201b72a4a2db 209 Gene3D G3DSA:3.30.420.10 13 152 8.5E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS00480 71fc63470443add43507201b72a4a2db 209 Hamap MF_00052_B Ribonuclease HII [rnhB]. 13 192 38.335 T 23-04-2016 IPR022898 Ribonuclease HII GO:0004523 LT40_RS00480 71fc63470443add43507201b72a4a2db 209 PANTHER PTHR10954 11 200 2.0E-78 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 LT40_RS10495 9112b2d88b63a3fd4f6cf174eb17f87e 306 Pfam PF06719 AraC-type transcriptional regulator N-terminus 37 188 1.5E-38 T 23-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal LT40_RS10495 9112b2d88b63a3fd4f6cf174eb17f87e 306 SUPERFAMILY SSF46689 202 251 9.22E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10495 9112b2d88b63a3fd4f6cf174eb17f87e 306 Gene3D G3DSA:1.10.10.60 255 297 6.5E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10495 9112b2d88b63a3fd4f6cf174eb17f87e 306 SMART SM00342 217 300 4.0E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10495 9112b2d88b63a3fd4f6cf174eb17f87e 306 PANTHER PTHR11019 37 304 1.2E-64 T 23-04-2016 LT40_RS10495 9112b2d88b63a3fd4f6cf174eb17f87e 306 Pfam PF12833 Helix-turn-helix domain 223 298 1.3E-17 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10495 9112b2d88b63a3fd4f6cf174eb17f87e 306 SUPERFAMILY SSF46689 253 303 1.47E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10495 9112b2d88b63a3fd4f6cf174eb17f87e 306 PANTHER PTHR11019:SF81 37 304 1.2E-64 T 23-04-2016 LT40_RS10495 9112b2d88b63a3fd4f6cf174eb17f87e 306 Gene3D G3DSA:1.10.10.60 198 254 2.0E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS00980 c18209dab6c091727a9fcb069d6ad862 435 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 420 4.5E-92 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 LT40_RS00980 c18209dab6c091727a9fcb069d6ad862 435 PANTHER PTHR11136 5 431 1.5E-106 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 LT40_RS00980 c18209dab6c091727a9fcb069d6ad862 435 PANTHER PTHR11136:SF0 5 431 1.5E-106 T 23-04-2016 LT40_RS00980 c18209dab6c091727a9fcb069d6ad862 435 Gene3D G3DSA:3.90.190.20 287 421 5.2E-33 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS00980 c18209dab6c091727a9fcb069d6ad862 435 Pfam PF08245 Mur ligase middle domain 47 186 1.4E-12 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS00980 c18209dab6c091727a9fcb069d6ad862 435 PIRSF PIRSF001563 1 426 1.1E-96 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 LT40_RS00980 c18209dab6c091727a9fcb069d6ad862 435 SUPERFAMILY SSF53244 286 422 2.56E-26 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS00980 c18209dab6c091727a9fcb069d6ad862 435 Gene3D G3DSA:3.40.1190.10 5 283 9.6E-84 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS00980 c18209dab6c091727a9fcb069d6ad862 435 SUPERFAMILY SSF53623 4 283 6.41E-85 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS09695 192c14f38324c0dfa6a11432953fcb64 164 PANTHER PTHR36302 1 162 1.1E-21 T 23-04-2016 LT40_RS09695 192c14f38324c0dfa6a11432953fcb64 164 Pfam PF04314 Protein of unknown function (DUF461) 38 140 1.1E-31 T 23-04-2016 IPR007410 DR1885-like metal-binding protein LT40_RS09695 192c14f38324c0dfa6a11432953fcb64 164 PANTHER PTHR36302:SF1 1 162 1.1E-21 T 23-04-2016 LT40_RS09695 192c14f38324c0dfa6a11432953fcb64 164 SUPERFAMILY SSF110087 14 151 2.75E-40 T 23-04-2016 IPR007410 DR1885-like metal-binding protein LT40_RS00935 33a4b1f3d352c26fdd4092f14fb2f275 222 Gene3D G3DSA:3.40.50.300 1 218 4.3E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00935 33a4b1f3d352c26fdd4092f14fb2f275 222 PANTHER PTHR24220:SF430 3 217 1.1E-91 T 23-04-2016 LT40_RS00935 33a4b1f3d352c26fdd4092f14fb2f275 222 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS00935 33a4b1f3d352c26fdd4092f14fb2f275 222 PANTHER PTHR24220 3 217 1.1E-91 T 23-04-2016 LT40_RS00935 33a4b1f3d352c26fdd4092f14fb2f275 222 SUPERFAMILY SSF52540 1 218 1.2E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00935 33a4b1f3d352c26fdd4092f14fb2f275 222 SMART SM00382 30 215 1.2E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS00935 33a4b1f3d352c26fdd4092f14fb2f275 222 Pfam PF00005 ABC transporter 21 166 3.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS17435 6463527a00a94a52c44339cae5bb08bc 281 PANTHER PTHR30177:SF2 5 272 3.0E-117 T 23-04-2016 LT40_RS17435 6463527a00a94a52c44339cae5bb08bc 281 PANTHER PTHR30177 5 272 3.0E-117 T 23-04-2016 LT40_RS17435 6463527a00a94a52c44339cae5bb08bc 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 265 2.2E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17435 6463527a00a94a52c44339cae5bb08bc 281 SUPERFAMILY SSF161098 86 270 2.49E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17435 6463527a00a94a52c44339cae5bb08bc 281 TIGRFAM TIGR03416 ABC_choXWV_perm: choline ABC transporter, permease protein 4 270 1.2E-130 T 23-04-2016 IPR017784 ABC transporter, choline, permease protein LT40_RS17435 6463527a00a94a52c44339cae5bb08bc 281 Gene3D G3DSA:1.10.3720.10 66 266 1.1E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS06540 f26aafadc675fa395204a3911b9c6b99 307 Gene3D G3DSA:3.40.190.10 164 265 9.7E-24 T 23-04-2016 LT40_RS06540 f26aafadc675fa395204a3911b9c6b99 307 PANTHER PTHR30537:SF5 1 300 4.3E-104 T 23-04-2016 LT40_RS06540 f26aafadc675fa395204a3911b9c6b99 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS06540 f26aafadc675fa395204a3911b9c6b99 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS06540 f26aafadc675fa395204a3911b9c6b99 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS06540 f26aafadc675fa395204a3911b9c6b99 307 PANTHER PTHR30537 1 300 4.3E-104 T 23-04-2016 LT40_RS06540 f26aafadc675fa395204a3911b9c6b99 307 Pfam PF03466 LysR substrate binding domain 91 300 1.5E-36 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS06540 f26aafadc675fa395204a3911b9c6b99 307 Gene3D G3DSA:1.10.10.10 7 83 7.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS06540 f26aafadc675fa395204a3911b9c6b99 307 SUPERFAMILY SSF53850 92 302 1.21E-38 T 23-04-2016 LT40_RS06540 f26aafadc675fa395204a3911b9c6b99 307 SUPERFAMILY SSF46785 8 88 3.26E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS06540 f26aafadc675fa395204a3911b9c6b99 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 2.7E-22 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS13290 17ff0d2f4b0268b15cf4247e34a53e57 322 Gene3D G3DSA:1.10.3470.10 7 320 6.8E-92 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS13290 17ff0d2f4b0268b15cf4247e34a53e57 322 SUPERFAMILY SSF81345 3 319 8.63E-77 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS13290 17ff0d2f4b0268b15cf4247e34a53e57 322 Pfam PF01032 FecCD transport family 14 319 1.9E-87 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LT40_RS13290 17ff0d2f4b0268b15cf4247e34a53e57 322 PANTHER PTHR30472:SF2 3 321 1.6E-103 T 23-04-2016 LT40_RS13290 17ff0d2f4b0268b15cf4247e34a53e57 322 PANTHER PTHR30472 3 321 1.6E-103 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LT40_RS16360 9333c32de8ebdb77ea71cb5ec2c1ed61 753 PANTHER PTHR30425 584 753 3.8E-170 T 23-04-2016 LT40_RS16360 9333c32de8ebdb77ea71cb5ec2c1ed61 753 PANTHER PTHR30425 309 518 3.8E-170 T 23-04-2016 LT40_RS16360 9333c32de8ebdb77ea71cb5ec2c1ed61 753 Gene3D G3DSA:1.10.3720.10 447 515 1.1E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16360 9333c32de8ebdb77ea71cb5ec2c1ed61 753 Gene3D G3DSA:1.10.3720.10 582 748 1.1E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16360 9333c32de8ebdb77ea71cb5ec2c1ed61 753 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 470 748 1.8E-9 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16360 9333c32de8ebdb77ea71cb5ec2c1ed61 753 SUPERFAMILY SSF161098 599 685 2.54E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16360 9333c32de8ebdb77ea71cb5ec2c1ed61 753 SUPERFAMILY SSF161098 448 515 2.54E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16360 9333c32de8ebdb77ea71cb5ec2c1ed61 753 PANTHER PTHR30425:SF3 584 753 3.8E-170 T 23-04-2016 LT40_RS16360 9333c32de8ebdb77ea71cb5ec2c1ed61 753 PANTHER PTHR30425:SF3 309 518 3.8E-170 T 23-04-2016 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 4.2E-39 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 5.2E-32 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 Gene3D G3DSA:1.10.287.990 20 89 4.9E-29 T 23-04-2016 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 PIRSF PIRSF000349 1 203 1.4E-80 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 SUPERFAMILY SSF46609 1 90 6.94E-36 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 8.0E-26 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 8.0E-26 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 8.0E-26 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 8.0E-26 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 8.0E-26 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 PANTHER PTHR11404 1 202 6.3E-106 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS03760 c6a01c50109d6c61eabfd14cbb2d36d7 203 SUPERFAMILY SSF54719 88 202 1.7E-44 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS20930 648a609ed048462d64431a7bea165644 699 Pfam PF14307 Glycosyltransferase WbsX 2 248 1.2E-75 T 23-04-2016 IPR032719 Glycosyltransferase WbsX LT40_RS20930 648a609ed048462d64431a7bea165644 699 PANTHER PTHR41244 1 267 1.7E-48 T 23-04-2016 LT40_RS20930 648a609ed048462d64431a7bea165644 699 Gene3D G3DSA:3.90.550.10 506 633 4.2E-11 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS20930 648a609ed048462d64431a7bea165644 699 SUPERFAMILY SSF53448 513 633 1.69E-11 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS20930 648a609ed048462d64431a7bea165644 699 Pfam PF00535 Glycosyl transferase family 2 513 591 1.9E-5 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS20930 648a609ed048462d64431a7bea165644 699 PANTHER PTHR41244:SF1 1 267 1.7E-48 T 23-04-2016 LT40_RS18210 fe476fa9192d160bfbce44efcd711f46 141 PANTHER PTHR40255 1 141 3.5E-64 T 23-04-2016 LT40_RS18210 fe476fa9192d160bfbce44efcd711f46 141 PIRSF PIRSF004638 1 141 9.7E-64 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 LT40_RS18210 fe476fa9192d160bfbce44efcd711f46 141 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 141 1.2E-58 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 LT40_RS18210 fe476fa9192d160bfbce44efcd711f46 141 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 3 141 1.8E-50 T 23-04-2016 IPR014351 Conserved hypothetical protein CHP00701 LT40_RS19165 bdf04de7b3b747a61baf3964e667f1a4 186 PANTHER PTHR13256:SF19 5 186 1.5E-52 T 23-04-2016 LT40_RS19165 bdf04de7b3b747a61baf3964e667f1a4 186 Gene3D G3DSA:3.40.630.30 5 183 2.2E-47 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS19165 bdf04de7b3b747a61baf3964e667f1a4 186 Pfam PF13302 Acetyltransferase (GNAT) domain 11 151 3.9E-28 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS19165 bdf04de7b3b747a61baf3964e667f1a4 186 PANTHER PTHR13256 5 186 1.5E-52 T 23-04-2016 LT40_RS19165 bdf04de7b3b747a61baf3964e667f1a4 186 SUPERFAMILY SSF55729 5 177 1.06E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 PANTHER PTHR18919 1 395 3.2E-219 T 23-04-2016 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 392 6.7E-126 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 Gene3D G3DSA:3.40.47.10 278 393 6.8E-55 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 Gene3D G3DSA:3.40.47.10 144 196 6.8E-55 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 PIRSF PIRSF000429 1 395 8.4E-111 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 PANTHER PTHR18919:SF110 1 395 3.2E-219 T 23-04-2016 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 Pfam PF00108 Thiolase, N-terminal domain 6 264 3.8E-85 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 Pfam PF02803 Thiolase, C-terminal domain 272 392 1.5E-41 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 SUPERFAMILY SSF53901 273 392 3.64E-39 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 SUPERFAMILY SSF53901 6 271 1.66E-75 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 Gene3D G3DSA:3.40.47.10 6 125 4.0E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS10390 56487565421d6b617a094fe1f65eaf10 395 Gene3D G3DSA:3.40.47.10 197 277 4.0E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS17625 a452a23a0b779a58e0856179233979ea 580 SMART SM01091 491 570 1.4E-11 T 23-04-2016 IPR005170 Transporter-associated domain LT40_RS17625 a452a23a0b779a58e0856179233979ea 580 Gene3D G3DSA:3.30.465.10 496 567 9.7E-9 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS17625 a452a23a0b779a58e0856179233979ea 580 PANTHER PTHR32507:SF7 1 570 1.5E-274 T 23-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 LT40_RS17625 a452a23a0b779a58e0856179233979ea 580 Pfam PF03471 Transporter associated domain 495 568 5.8E-10 T 23-04-2016 IPR005170 Transporter-associated domain LT40_RS17625 a452a23a0b779a58e0856179233979ea 580 Gene3D G3DSA:3.30.70.1450 415 482 4.5E-7 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LT40_RS17625 a452a23a0b779a58e0856179233979ea 580 Pfam PF00999 Sodium/hydrogen exchanger family 15 387 1.5E-55 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LT40_RS17625 a452a23a0b779a58e0856179233979ea 580 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 573 51.055 T 23-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 LT40_RS17625 a452a23a0b779a58e0856179233979ea 580 SUPERFAMILY SSF116726 409 482 5.75E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LT40_RS17625 a452a23a0b779a58e0856179233979ea 580 SUPERFAMILY SSF56176 496 568 9.27E-9 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS17625 a452a23a0b779a58e0856179233979ea 580 Pfam PF02080 TrkA-C domain 416 482 2.5E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LT40_RS17625 a452a23a0b779a58e0856179233979ea 580 PANTHER PTHR32507 1 570 1.5E-274 T 23-04-2016 LT40_RS01610 dc6554887a8ab38e42ced35a5bcd490d 234 PANTHER PTHR24220:SF404 3 214 4.4E-77 T 23-04-2016 LT40_RS01610 dc6554887a8ab38e42ced35a5bcd490d 234 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS01610 dc6554887a8ab38e42ced35a5bcd490d 234 Pfam PF00005 ABC transporter 19 160 1.0E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS01610 dc6554887a8ab38e42ced35a5bcd490d 234 SUPERFAMILY SSF52540 1 220 1.07E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01610 dc6554887a8ab38e42ced35a5bcd490d 234 SMART SM00382 26 210 3.2E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS01610 dc6554887a8ab38e42ced35a5bcd490d 234 Gene3D G3DSA:3.40.50.300 1 224 8.5E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01610 dc6554887a8ab38e42ced35a5bcd490d 234 PANTHER PTHR24220 3 214 4.4E-77 T 23-04-2016 LT40_RS07425 866ff676b44ffa7bd7cb954223eae470 122 PANTHER PTHR26402 2 117 4.6E-30 T 23-04-2016 LT40_RS07425 866ff676b44ffa7bd7cb954223eae470 122 SUPERFAMILY SSF52172 1 117 4.27E-30 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS07425 866ff676b44ffa7bd7cb954223eae470 122 Pfam PF00072 Response regulator receiver domain 4 113 6.2E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS07425 866ff676b44ffa7bd7cb954223eae470 122 SMART SM00448 2 113 2.1E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS07425 866ff676b44ffa7bd7cb954223eae470 122 Gene3D G3DSA:3.40.50.2300 1 117 7.7E-31 T 23-04-2016 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 SMART SM00387 512 622 1.9E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 PIRSF PIRSF036431 5 629 5.6E-207 T 23-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 Gene3D G3DSA:3.30.450.20 100 191 3.3E-5 T 23-04-2016 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 SUPERFAMILY SSF55874 476 623 7.47E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 PANTHER PTHR24423 382 629 8.3E-115 T 23-04-2016 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 PANTHER PTHR24423 78 135 8.3E-115 T 23-04-2016 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 579 5.6E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 606 619 5.6E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 600 5.6E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 565 5.6E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 Pfam PF00512 His Kinase A (phospho-acceptor) domain 407 471 1.9E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 PANTHER PTHR24423:SF451 382 629 8.3E-115 T 23-04-2016 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 PANTHER PTHR24423:SF451 78 135 8.3E-115 T 23-04-2016 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 Gene3D G3DSA:1.10.287.130 404 458 2.7E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 SUPERFAMILY SSF103190 77 201 2.62E-14 T 23-04-2016 IPR029151 Periplasmic sensor domain-like LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 SMART SM00388 405 473 6.4E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 513 621 6.7E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 SUPERFAMILY SSF47384 391 472 6.08E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 Gene3D G3DSA:3.30.565.10 459 622 1.2E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS01195 1afcb0c351900dfa2da9427cd0385171 629 Pfam PF02743 Cache domain 47 236 3.9E-17 T 23-04-2016 IPR033479 Double Cache domain 1 LT40_RS15225 b9ce2997041211d6802e3952aa208c6d 475 SUPERFAMILY SSF53720 5 470 1.06E-149 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS15225 b9ce2997041211d6802e3952aa208c6d 475 Gene3D G3DSA:3.40.605.10 6 258 9.4E-79 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS15225 b9ce2997041211d6802e3952aa208c6d 475 Pfam PF00171 Aldehyde dehydrogenase family 13 468 2.6E-150 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS15225 b9ce2997041211d6802e3952aa208c6d 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS15225 b9ce2997041211d6802e3952aa208c6d 475 Gene3D G3DSA:3.40.309.10 259 445 3.6E-63 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS15225 b9ce2997041211d6802e3952aa208c6d 475 PANTHER PTHR11699:SF214 3 471 2.2E-219 T 23-04-2016 LT40_RS15225 b9ce2997041211d6802e3952aa208c6d 475 PANTHER PTHR11699 3 471 2.2E-219 T 23-04-2016 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 SUPERFAMILY SSF51905 6 262 1.82E-73 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 SUPERFAMILY SSF51905 361 426 1.82E-73 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 PIRSF PIRSF000171 1 581 8.1E-48 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 Gene3D G3DSA:3.90.700.10 246 352 1.5E-39 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 462 590 4.9E-41 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 Gene3D G3DSA:1.20.58.100 451 557 2.8E-40 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 Gene3D G3DSA:3.50.50.60 353 425 1.6E-116 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 Gene3D G3DSA:3.50.50.60 4 245 1.6E-116 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 10 590 2.9E-252 T 23-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 44 53 - T 23-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 8 590 2.6E-299 T 23-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 Gene3D G3DSA:4.10.80.40 558 590 1.8E-20 T 23-04-2016 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 Pfam PF00890 FAD binding domain 10 407 6.5E-118 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 PANTHER PTHR11632:SF5 3 575 0.0 T 23-04-2016 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 SUPERFAMILY SSF56425 240 358 1.79E-40 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 SUPERFAMILY SSF46977 455 590 1.02E-49 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 LT40_RS12590 dd712554fd2b63ceab8fa60979ab3019 590 PANTHER PTHR11632 3 575 0.0 T 23-04-2016 LT40_RS08245 fab90835ba459d4b4d29da0120047bc0 429 Gene3D G3DSA:3.40.47.10 7 271 1.0E-71 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS08245 fab90835ba459d4b4d29da0120047bc0 429 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 261 3.2E-53 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal LT40_RS08245 fab90835ba459d4b4d29da0120047bc0 429 PIRSF PIRSF000447 5 428 2.5E-156 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 LT40_RS08245 fab90835ba459d4b4d29da0120047bc0 429 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 168 184 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site LT40_RS08245 fab90835ba459d4b4d29da0120047bc0 429 Gene3D G3DSA:3.40.47.10 278 427 4.6E-56 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS08245 fab90835ba459d4b4d29da0120047bc0 429 PANTHER PTHR11712 1 427 3.6E-170 T 23-04-2016 LT40_RS08245 fab90835ba459d4b4d29da0120047bc0 429 SUPERFAMILY SSF53901 229 426 2.99E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS08245 fab90835ba459d4b4d29da0120047bc0 429 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 269 382 2.8E-34 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal LT40_RS08245 fab90835ba459d4b4d29da0120047bc0 429 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 8 424 1.7E-159 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 LT40_RS08245 fab90835ba459d4b4d29da0120047bc0 429 SUPERFAMILY SSF53901 8 266 5.51E-68 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS08245 fab90835ba459d4b4d29da0120047bc0 429 SMART SM00825 Beta-ketoacyl synthase 10 428 8.5E-14 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LT40_RS10145 85d0a3ee92053d77828d4dff1febd6ce 793 Gene3D G3DSA:3.40.50.300 102 273 2.1E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10145 85d0a3ee92053d77828d4dff1febd6ce 793 Gene3D G3DSA:3.40.50.300 461 581 2.1E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10145 85d0a3ee92053d77828d4dff1febd6ce 793 Gene3D G3DSA:3.40.50.300 590 767 1.1E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10145 85d0a3ee92053d77828d4dff1febd6ce 793 PANTHER PTHR11070 545 760 5.4E-33 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LT40_RS10145 85d0a3ee92053d77828d4dff1febd6ce 793 PANTHER PTHR11070 427 529 5.4E-33 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LT40_RS10145 85d0a3ee92053d77828d4dff1febd6ce 793 PANTHER PTHR11070 101 274 5.4E-33 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LT40_RS10145 85d0a3ee92053d77828d4dff1febd6ce 793 Pfam PF00580 UvrD/REP helicase N-terminal domain 505 577 4.5E-10 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LT40_RS10145 85d0a3ee92053d77828d4dff1febd6ce 793 Pfam PF00580 UvrD/REP helicase N-terminal domain 105 194 7.9E-8 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LT40_RS10145 85d0a3ee92053d77828d4dff1febd6ce 793 SUPERFAMILY SSF52540 451 760 2.13E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10145 85d0a3ee92053d77828d4dff1febd6ce 793 SUPERFAMILY SSF52540 102 253 2.13E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14145 cedaa02bed20c01eb58d259d588f23bb 399 SUPERFAMILY SSF50129 4 188 9.91E-63 T 23-04-2016 IPR011032 GroES-like LT40_RS14145 cedaa02bed20c01eb58d259d588f23bb 399 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LT40_RS14145 cedaa02bed20c01eb58d259d588f23bb 399 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 2 395 1.1E-229 T 23-04-2016 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 LT40_RS14145 cedaa02bed20c01eb58d259d588f23bb 399 Gene3D G3DSA:3.40.50.720 189 308 1.2E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS14145 cedaa02bed20c01eb58d259d588f23bb 399 PANTHER PTHR11695 15 396 2.4E-195 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS14145 cedaa02bed20c01eb58d259d588f23bb 399 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 144 4.2E-26 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LT40_RS14145 cedaa02bed20c01eb58d259d588f23bb 399 Pfam PF00107 Zinc-binding dehydrogenase 197 265 1.6E-8 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LT40_RS14145 cedaa02bed20c01eb58d259d588f23bb 399 Gene3D G3DSA:3.90.180.10 5 188 1.5E-45 T 23-04-2016 IPR011032 GroES-like LT40_RS14145 cedaa02bed20c01eb58d259d588f23bb 399 PANTHER PTHR11695:SF586 15 396 2.4E-195 T 23-04-2016 LT40_RS14145 cedaa02bed20c01eb58d259d588f23bb 399 SUPERFAMILY SSF51735 162 356 4.27E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 Pfam PF16189 Creatinase/Prolidase N-terminal domain 156 314 8.2E-37 T 23-04-2016 LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 PANTHER PTHR10804:SF87 290 600 3.1E-158 T 23-04-2016 LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 PANTHER PTHR10804:SF87 5 188 3.1E-158 T 23-04-2016 LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 Gene3D G3DSA:3.90.230.10 309 568 7.9E-59 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 PANTHER PTHR10804 290 600 3.1E-158 T 23-04-2016 LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 PANTHER PTHR10804 5 188 3.1E-158 T 23-04-2016 LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 Pfam PF16188 C-terminal region of peptidase_M24 542 602 9.0E-24 T 23-04-2016 IPR032416 Peptidase M24, C-terminal domain LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 Pfam PF01321 Creatinase/Prolidase N-terminal domain 14 137 1.6E-14 T 23-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 SUPERFAMILY SSF53092 12 138 5.41E-11 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 Pfam PF00557 Metallopeptidase family M24 317 531 3.4E-43 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 Gene3D G3DSA:3.40.350.10 176 294 3.3E-8 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 Gene3D G3DSA:3.40.350.10 12 138 1.1E-18 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LT40_RS02875 38be4325be9c3c6bcc2c23b38cf969a3 602 SUPERFAMILY SSF55920 308 560 4.06E-53 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS18410 47378ddf2e7f4093918ba8a8fb0c9dca 104 Pfam PF00467 KOW motif 7 31 2.9E-5 T 23-04-2016 IPR005824 KOW LT40_RS18410 47378ddf2e7f4093918ba8a8fb0c9dca 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 3.8E-37 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18410 47378ddf2e7f4093918ba8a8fb0c9dca 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 23-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18410 47378ddf2e7f4093918ba8a8fb0c9dca 104 SUPERFAMILY SSF50104 3 99 1.63E-32 T 23-04-2016 IPR008991 Translation protein SH3-like domain LT40_RS18410 47378ddf2e7f4093918ba8a8fb0c9dca 104 SMART SM00739 3 30 7.7E-4 T 23-04-2016 IPR005824 KOW LT40_RS18410 47378ddf2e7f4093918ba8a8fb0c9dca 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 96 20.959 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18410 47378ddf2e7f4093918ba8a8fb0c9dca 104 PANTHER PTHR12903 3 98 1.5E-43 T 23-04-2016 LT40_RS18410 47378ddf2e7f4093918ba8a8fb0c9dca 104 Gene3D G3DSA:2.30.30.30 3 91 9.1E-21 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 LT40_RS18410 47378ddf2e7f4093918ba8a8fb0c9dca 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 3.2E-24 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 PANTHER PTHR19370 31 316 2.6E-72 T 23-04-2016 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 PANTHER PTHR19370:SF68 31 316 2.6E-72 T 23-04-2016 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 67 3.5E-8 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 215 5.8E-11 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 138 145 5.8E-11 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 221 230 5.8E-11 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 180 189 5.8E-11 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 122 134 5.8E-11 T 23-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 SUPERFAMILY SSF54292 2 80 6.6E-17 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 SUPERFAMILY SSF63380 93 186 1.4E-17 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 Gene3D G3DSA:3.40.50.80 191 317 1.1E-30 T 23-04-2016 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 SUPERFAMILY SSF52343 192 317 1.18E-29 T 23-04-2016 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 Gene3D G3DSA:2.40.30.10 93 186 3.9E-19 T 23-04-2016 LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 Gene3D G3DSA:3.10.20.30 2 78 3.9E-17 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS16885 4832e6af31bd6e555c791a854afe2677 323 Pfam PF00175 Oxidoreductase NAD-binding domain 197 297 1.4E-13 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LT40_RS06650 79ae3d0defe464a526e380e2808cc17b 351 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 21 248 1.6E-67 T 23-04-2016 IPR018642 Protein of unknown function DUF2066 LT40_RS05110 800d43fffd739a8df2c7dad1e50173d7 550 PIRSF PIRSF002741 14 546 1.5E-65 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS05110 800d43fffd739a8df2c7dad1e50173d7 550 SUPERFAMILY SSF53850 38 546 8.87E-94 T 23-04-2016 LT40_RS05110 800d43fffd739a8df2c7dad1e50173d7 550 Gene3D G3DSA:3.90.76.10 56 208 3.7E-35 T 23-04-2016 LT40_RS05110 800d43fffd739a8df2c7dad1e50173d7 550 Gene3D G3DSA:3.40.190.10 209 316 3.7E-16 T 23-04-2016 LT40_RS05110 800d43fffd739a8df2c7dad1e50173d7 550 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 447 1.2E-64 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS05110 800d43fffd739a8df2c7dad1e50173d7 550 PANTHER PTHR30290 18 545 2.1E-81 T 23-04-2016 LT40_RS05110 800d43fffd739a8df2c7dad1e50173d7 550 Gene3D G3DSA:3.10.105.10 317 518 1.2E-36 T 23-04-2016 LT40_RS14230 9f25f826d9bf7d11136b59e0ea662981 189 PANTHER PTHR40278 1 185 3.3E-46 T 23-04-2016 LT40_RS14230 9f25f826d9bf7d11136b59e0ea662981 189 Pfam PF05137 Fimbrial assembly protein (PilN) 100 177 5.0E-20 T 23-04-2016 IPR007813 Fimbrial assembly PilN LT40_RS14230 9f25f826d9bf7d11136b59e0ea662981 189 PANTHER PTHR40278:SF1 1 185 3.3E-46 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 SUPERFAMILY SSF82693 552 658 3.92E-7 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 PANTHER PTHR32063 5 1011 0.0 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 SUPERFAMILY SSF82693 44 139 2.22E-17 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 Gene3D G3DSA:3.30.70.1430 44 142 8.0E-20 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 SUPERFAMILY SSF82714 189 269 2.09E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 PANTHER PTHR32063:SF7 5 1011 0.0 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 SUPERFAMILY SSF82866 295 490 4.05E-33 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 Gene3D G3DSA:3.30.70.1430 556 629 6.4E-4 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 SUPERFAMILY SSF82714 705 789 2.75E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 Gene3D G3DSA:1.10.3850.10 277 493 1.7E-41 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 Gene3D G3DSA:1.10.3850.10 796 1008 4.1E-48 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 SUPERFAMILY SSF82693 141 186 5.49E-20 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 SUPERFAMILY SSF82693 272 327 5.49E-20 T 23-04-2016 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 2.1E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 2.1E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 PRINTS PR00702 Acriflavin resistance protein family signature 14 38 2.1E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 2.1E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.1E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 2.1E-20 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 Gene3D G3DSA:3.30.2090.10 191 269 5.4E-12 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 Gene3D G3DSA:3.30.2090.10 705 789 3.2E-15 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 Pfam PF00873 AcrB/AcrD/AcrF family 8 1004 8.2E-164 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS15315 057bb247e0aff8aa1863fd647a5910a9 1019 SUPERFAMILY SSF82866 788 1011 8.76E-43 T 23-04-2016 LT40_RS00425 f39f24be94b770a0151e916031c8c49a 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 24.685 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 LT40_RS00425 f39f24be94b770a0151e916031c8c49a 185 Gene3D G3DSA:1.10.132.20 67 185 3.1E-38 T 23-04-2016 IPR023584 Ribosome recycling factor domain LT40_RS00425 f39f24be94b770a0151e916031c8c49a 185 PANTHER PTHR20982 1 185 1.3E-69 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 LT40_RS00425 f39f24be94b770a0151e916031c8c49a 185 Pfam PF01765 Ribosome recycling factor 20 183 2.4E-54 T 23-04-2016 IPR023584 Ribosome recycling factor domain LT40_RS00425 f39f24be94b770a0151e916031c8c49a 185 SUPERFAMILY SSF55194 1 185 2.88E-64 T 23-04-2016 IPR023584 Ribosome recycling factor domain LT40_RS00425 f39f24be94b770a0151e916031c8c49a 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.9E-61 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 LT40_RS00525 c8a53d58598e944c95322d11cd3395f0 297 Gene3D G3DSA:3.40.190.10 94 178 8.7E-23 T 23-04-2016 LT40_RS00525 c8a53d58598e944c95322d11cd3395f0 297 SUPERFAMILY SSF53850 89 291 1.81E-46 T 23-04-2016 LT40_RS00525 c8a53d58598e944c95322d11cd3395f0 297 Gene3D G3DSA:1.10.10.10 10 89 4.5E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00525 c8a53d58598e944c95322d11cd3395f0 297 PANTHER PTHR30537:SF10 1 292 2.2E-154 T 23-04-2016 LT40_RS00525 c8a53d58598e944c95322d11cd3395f0 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 65 7.0E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS00525 c8a53d58598e944c95322d11cd3395f0 297 PANTHER PTHR30537 1 292 2.2E-154 T 23-04-2016 LT40_RS00525 c8a53d58598e944c95322d11cd3395f0 297 Pfam PF03466 LysR substrate binding domain 90 287 1.6E-46 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS00525 c8a53d58598e944c95322d11cd3395f0 297 SUPERFAMILY SSF46785 8 90 2.54E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00525 c8a53d58598e944c95322d11cd3395f0 297 Gene3D G3DSA:3.40.190.10 179 256 1.6E-22 T 23-04-2016 LT40_RS00685 9f7285a68e38276b66d754e6b9818651 192 Pfam PF02545 Maf-like protein 4 185 5.2E-42 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 LT40_RS00685 9f7285a68e38276b66d754e6b9818651 192 Gene3D G3DSA:3.90.950.10 2 190 1.2E-53 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LT40_RS00685 9f7285a68e38276b66d754e6b9818651 192 PANTHER PTHR11746:SF102 118 191 8.3E-32 T 23-04-2016 LT40_RS00685 9f7285a68e38276b66d754e6b9818651 192 PANTHER PTHR11746 118 191 8.3E-32 T 23-04-2016 LT40_RS00685 9f7285a68e38276b66d754e6b9818651 192 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 28.942 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 LT40_RS00685 9f7285a68e38276b66d754e6b9818651 192 PIRSF PIRSF006305 1 191 9.5E-41 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 LT40_RS00685 9f7285a68e38276b66d754e6b9818651 192 SUPERFAMILY SSF52972 2 185 3.34E-57 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LT40_RS00685 9f7285a68e38276b66d754e6b9818651 192 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 2.9E-48 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 LT40_RS06870 7a1f48cad70cdf0b74779ed2db1c16f6 535 SUPERFAMILY SSF52096 237 517 1.11E-84 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS06870 7a1f48cad70cdf0b74779ed2db1c16f6 535 PANTHER PTHR22855 1 535 0.0 T 23-04-2016 LT40_RS06870 7a1f48cad70cdf0b74779ed2db1c16f6 535 PANTHER PTHR22855:SF35 1 535 0.0 T 23-04-2016 LT40_RS06870 7a1f48cad70cdf0b74779ed2db1c16f6 535 Gene3D G3DSA:3.90.226.10 33 271 5.0E-79 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS06870 7a1f48cad70cdf0b74779ed2db1c16f6 535 Gene3D G3DSA:3.90.226.10 281 530 8.5E-90 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS06870 7a1f48cad70cdf0b74779ed2db1c16f6 535 SUPERFAMILY SSF52096 23 271 1.81E-69 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS06870 7a1f48cad70cdf0b74779ed2db1c16f6 535 Pfam PF01039 Carboxyl transferase domain 48 524 6.2E-148 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS01040 2cf6e89674166ebf39cd650bb72854d5 400 SUPERFAMILY SSF103473 13 392 2.88E-42 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS01040 2cf6e89674166ebf39cd650bb72854d5 400 PANTHER PTHR23517 10 387 3.6E-131 T 23-04-2016 LT40_RS01040 2cf6e89674166ebf39cd650bb72854d5 400 Gene3D G3DSA:1.20.1250.20 13 191 3.5E-11 T 23-04-2016 LT40_RS01040 2cf6e89674166ebf39cd650bb72854d5 400 Gene3D G3DSA:1.20.1250.20 219 389 5.4E-21 T 23-04-2016 LT40_RS01040 2cf6e89674166ebf39cd650bb72854d5 400 PANTHER PTHR23517:SF4 10 387 3.6E-131 T 23-04-2016 LT40_RS01040 2cf6e89674166ebf39cd650bb72854d5 400 Pfam PF07690 Major Facilitator Superfamily 222 388 2.2E-13 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 13 24 6.0E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 162 182 6.0E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 113 126 6.0E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 6.0E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 PANTHER PTHR18901:SF14 14 227 2.1E-72 T 23-04-2016 LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 Gene3D G3DSA:3.40.50.1000 14 29 3.6E-41 T 23-04-2016 IPR023214 HAD-like domain LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 Gene3D G3DSA:3.40.50.1000 87 226 3.6E-41 T 23-04-2016 IPR023214 HAD-like domain LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 13 231 35.43 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 16 226 2.2E-65 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 PANTHER PTHR18901 14 227 2.1E-72 T 23-04-2016 LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 SUPERFAMILY SSF56784 13 225 6.7E-58 T 23-04-2016 IPR023214 HAD-like domain LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 199 2.0E-37 T 23-04-2016 IPR023214 HAD-like domain LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 77 198 2.6E-12 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 Gene3D G3DSA:1.10.150.240 30 86 1.0E-24 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LT40_RS18155 b61b09ea1befafe20ed96c6be636aef3 272 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 194 9.1E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 SUPERFAMILY SSF88723 13 75 1.63E-16 T 23-04-2016 IPR029060 PIN domain-like LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 SUPERFAMILY SSF88723 111 161 1.63E-16 T 23-04-2016 IPR029060 PIN domain-like LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 Pfam PF13638 PIN domain 16 160 1.6E-38 T 23-04-2016 IPR002716 PIN domain LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 Pfam PF02562 PhoH-like protein 255 449 3.7E-44 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 SMART SM00670 14 148 4.0E-7 T 23-04-2016 IPR002716 PIN domain LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 Gene3D G3DSA:3.40.50.1010 16 74 3.0E-13 T 23-04-2016 IPR029060 PIN domain-like LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 Gene3D G3DSA:3.40.50.1010 111 164 3.0E-13 T 23-04-2016 IPR029060 PIN domain-like LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 SUPERFAMILY SSF52540 209 444 8.69E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 PANTHER PTHR30473:SF2 13 188 4.6E-191 T 23-04-2016 LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 PANTHER PTHR30473:SF2 207 459 4.6E-191 T 23-04-2016 LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 Gene3D G3DSA:3.40.50.300 252 461 2.9E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 PANTHER PTHR30473 13 188 4.6E-191 T 23-04-2016 LT40_RS03020 3491d68d8cd95c600829a599ff4d4215 464 PANTHER PTHR30473 207 459 4.6E-191 T 23-04-2016 LT40_RS06800 27b604df3f7465530c011df7a8899bef 292 PANTHER PTHR30477:SF15 59 217 4.8E-43 T 23-04-2016 LT40_RS06800 27b604df3f7465530c011df7a8899bef 292 PANTHER PTHR30477 59 217 4.8E-43 T 23-04-2016 LT40_RS06800 27b604df3f7465530c011df7a8899bef 292 SUPERFAMILY SSF53807 82 292 4.91E-29 T 23-04-2016 LT40_RS06800 27b604df3f7465530c011df7a8899bef 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 108 288 3.8E-17 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 LT40_RS06800 27b604df3f7465530c011df7a8899bef 292 Gene3D G3DSA:3.40.50.1980 193 290 7.6E-5 T 23-04-2016 LT40_RS06800 27b604df3f7465530c011df7a8899bef 292 Gene3D G3DSA:3.40.50.1980 132 189 1.1E-5 T 23-04-2016 LT40_RS13700 e4ab64e61d0c6b556cc20773025c0b62 296 PANTHER PTHR33490:SF6 5 296 5.3E-78 T 23-04-2016 LT40_RS13700 e4ab64e61d0c6b556cc20773025c0b62 296 Pfam PF01841 Transglutaminase-like superfamily 148 249 2.4E-23 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS13700 e4ab64e61d0c6b556cc20773025c0b62 296 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 84 4.8E-25 T 23-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal LT40_RS13700 e4ab64e61d0c6b556cc20773025c0b62 296 SMART SM00460 181 251 1.4E-22 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS13700 e4ab64e61d0c6b556cc20773025c0b62 296 PANTHER PTHR33490 5 296 5.3E-78 T 23-04-2016 LT40_RS13700 e4ab64e61d0c6b556cc20773025c0b62 296 Gene3D G3DSA:3.90.260.10 183 256 6.0E-13 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS13700 e4ab64e61d0c6b556cc20773025c0b62 296 SUPERFAMILY SSF54001 71 276 1.18E-46 T 23-04-2016 LT40_RS20570 a3c8275dc2d897e2f894e1613145ccc4 729 Gene3D G3DSA:2.40.170.20 180 729 7.6E-135 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS20570 a3c8275dc2d897e2f894e1613145ccc4 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 67 166 4.4E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS20570 a3c8275dc2d897e2f894e1613145ccc4 729 Pfam PF00593 TonB dependent receptor 486 721 3.2E-31 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS20570 a3c8275dc2d897e2f894e1613145ccc4 729 Gene3D G3DSA:2.170.130.10 34 174 3.0E-30 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS20570 a3c8275dc2d897e2f894e1613145ccc4 729 PANTHER PTHR32552 11 729 4.3E-227 T 23-04-2016 LT40_RS20570 a3c8275dc2d897e2f894e1613145ccc4 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 729 1.2E-92 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS20570 a3c8275dc2d897e2f894e1613145ccc4 729 PANTHER PTHR32552:SF8 11 729 4.3E-227 T 23-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LT40_RS20570 a3c8275dc2d897e2f894e1613145ccc4 729 SUPERFAMILY SSF56935 35 729 1.44E-120 T 23-04-2016 LT40_RS11860 788b48d8d1e74b81db91a1ad12b0f2e9 350 SUPERFAMILY SSF51430 1 348 6.29E-105 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS11860 788b48d8d1e74b81db91a1ad12b0f2e9 350 PANTHER PTHR11732 160 350 1.2E-153 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS11860 788b48d8d1e74b81db91a1ad12b0f2e9 350 PANTHER PTHR11732 1 142 1.2E-153 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS11860 788b48d8d1e74b81db91a1ad12b0f2e9 350 Gene3D G3DSA:3.20.20.100 1 346 1.0E-104 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS11860 788b48d8d1e74b81db91a1ad12b0f2e9 350 PANTHER PTHR11732:SF112 160 350 1.2E-153 T 23-04-2016 LT40_RS11860 788b48d8d1e74b81db91a1ad12b0f2e9 350 PANTHER PTHR11732:SF112 1 142 1.2E-153 T 23-04-2016 LT40_RS11860 788b48d8d1e74b81db91a1ad12b0f2e9 350 Pfam PF00248 Aldo/keto reductase family 16 341 2.5E-68 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 Pfam PF12831 FAD dependent oxidoreductase 172 209 4.3E-10 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 SUPERFAMILY SSF51905 167 471 2.72E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 373 389 1.1E-11 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 284 292 1.1E-11 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 172 194 1.1E-11 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 460 478 1.1E-11 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 SUPERFAMILY SSF103025 614 896 1.88E-92 T 23-04-2016 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 896 991 8.1E-9 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 TIGRFAM TIGR01372 soxA: sarcosine oxidase, alpha subunit family 2 1004 0.0 T 23-04-2016 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PANTHER PTHR13847 120 222 6.1E-152 T 23-04-2016 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PANTHER PTHR13847 616 928 6.1E-152 T 23-04-2016 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 Gene3D G3DSA:2.40.30.110 910 1004 1.4E-17 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 Pfam PF01571 Aminomethyltransferase folate-binding domain 620 885 4.6E-75 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 450 472 1.7E-9 T 23-04-2016 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 192 1.7E-9 T 23-04-2016 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 301 1.7E-9 T 23-04-2016 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 Gene3D G3DSA:3.30.70.1400 675 749 6.1E-24 T 23-04-2016 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 102 1.7E-23 T 23-04-2016 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 SUPERFAMILY SSF101790 906 1003 6.21E-16 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PIRSF PIRSF037980 1 1005 0.0 T 23-04-2016 IPR006277 Sarcosine oxidase, alpha subunit GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 Gene3D G3DSA:3.30.1360.120 769 862 5.8E-29 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 Gene3D G3DSA:3.30.1360.120 615 674 5.8E-29 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 Gene3D G3DSA:3.50.50.60 359 472 9.7E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 Gene3D G3DSA:3.50.50.60 164 312 9.7E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PANTHER PTHR13847:SF189 120 222 6.1E-152 T 23-04-2016 LT40_RS14160 84da45a85c6db00aec3e15aa30c661a1 1005 PANTHER PTHR13847:SF189 616 928 6.1E-152 T 23-04-2016 LT40_RS05790 5756c88892b25baffec66da0d7992bc6 102 Gene3D G3DSA:3.30.70.1060 1 97 3.5E-35 T 23-04-2016 LT40_RS05790 5756c88892b25baffec66da0d7992bc6 102 PANTHER PTHR33606 1 101 3.1E-33 T 23-04-2016 LT40_RS05790 5756c88892b25baffec66da0d7992bc6 102 Pfam PF03795 YCII-related domain 1 95 4.1E-29 T 23-04-2016 IPR005545 YCII-related LT40_RS05790 5756c88892b25baffec66da0d7992bc6 102 SUPERFAMILY SSF54909 1 97 5.63E-31 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 Gene3D G3DSA:2.30.42.10 266 351 8.0E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 215 571 3.4E-95 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 Pfam PF03572 Peptidase family S41 376 549 6.3E-52 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 PANTHER PTHR32060:SF11 8 624 1.3E-264 T 23-04-2016 LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 PANTHER PTHR32060 8 624 1.3E-264 T 23-04-2016 LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 Gene3D G3DSA:3.90.226.10 352 553 1.0E-61 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 Gene3D G3DSA:3.90.226.10 673 698 1.0E-61 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 SMART SM00228 259 336 9.8E-5 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 SUPERFAMILY SSF52096 185 277 9.61E-70 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 SUPERFAMILY SSF52096 370 555 9.61E-70 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 Gene3D G3DSA:3.30.750.44 183 265 5.3E-5 T 23-04-2016 LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 SUPERFAMILY SSF50156 250 334 1.63E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 554 695 3.5E-39 T 23-04-2016 IPR020992 Tail specific protease, C-terminal LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 252 332 8.5E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS05720 b7ffa29cfa75905cfe797748b439f00b 704 SMART SM00245 342 551 1.7E-55 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 LT40_RS18350 6edcb6c8fe0e2b3fab0ef75102b811fc 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18350 6edcb6c8fe0e2b3fab0ef75102b811fc 103 SUPERFAMILY SSF54999 6 101 1.16E-36 T 23-04-2016 IPR027486 Ribosomal protein S10 domain LT40_RS18350 6edcb6c8fe0e2b3fab0ef75102b811fc 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 1.9E-35 T 23-04-2016 IPR027486 Ribosomal protein S10 domain LT40_RS18350 6edcb6c8fe0e2b3fab0ef75102b811fc 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 5.7E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LT40_RS18350 6edcb6c8fe0e2b3fab0ef75102b811fc 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 5.7E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LT40_RS18350 6edcb6c8fe0e2b3fab0ef75102b811fc 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 5.7E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LT40_RS18350 6edcb6c8fe0e2b3fab0ef75102b811fc 103 PANTHER PTHR11700 1 102 7.9E-54 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LT40_RS18350 6edcb6c8fe0e2b3fab0ef75102b811fc 103 SMART SM01403 7 101 1.7E-55 T 23-04-2016 IPR027486 Ribosomal protein S10 domain LT40_RS18350 6edcb6c8fe0e2b3fab0ef75102b811fc 103 Gene3D G3DSA:3.30.70.600 3 102 1.0E-43 T 23-04-2016 IPR027486 Ribosomal protein S10 domain LT40_RS18350 6edcb6c8fe0e2b3fab0ef75102b811fc 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.096 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LT40_RS18350 6edcb6c8fe0e2b3fab0ef75102b811fc 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.3E-46 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 LT40_RS15985 3e4b268a0dd976c94da7063f96d3d3d9 183 PANTHER PTHR30037:SF4 1 181 1.9E-100 T 23-04-2016 LT40_RS15985 3e4b268a0dd976c94da7063f96d3d3d9 183 PANTHER PTHR30037 1 181 1.9E-100 T 23-04-2016 LT40_RS15985 3e4b268a0dd976c94da7063f96d3d3d9 183 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 3 178 8.6E-85 T 23-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 LT40_RS15985 3e4b268a0dd976c94da7063f96d3d3d9 183 SUPERFAMILY SSF48150 1 179 1.92E-71 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS15985 3e4b268a0dd976c94da7063f96d3d3d9 183 Gene3D G3DSA:1.10.340.30 2 178 1.1E-71 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS15985 3e4b268a0dd976c94da7063f96d3d3d9 183 Pfam PF03352 Methyladenine glycosylase 6 177 1.2E-67 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 LT40_RS12845 47a11c7f4d35ae97893d5a168cd5e522 338 PANTHER PTHR11061:SF34 3 310 4.7E-77 T 23-04-2016 LT40_RS12845 47a11c7f4d35ae97893d5a168cd5e522 338 PANTHER PTHR11061 3 310 4.7E-77 T 23-04-2016 LT40_RS12845 47a11c7f4d35ae97893d5a168cd5e522 338 SUPERFAMILY SSF53335 14 323 2.94E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS12845 47a11c7f4d35ae97893d5a168cd5e522 338 Gene3D G3DSA:3.40.50.150 44 336 1.5E-51 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS12845 47a11c7f4d35ae97893d5a168cd5e522 338 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 31 211 2.1E-23 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 LT40_RS19295 bde6e17a0dd397fbba9f0e55845a5ad1 374 SUPERFAMILY SSF53335 207 350 1.09E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS19295 bde6e17a0dd397fbba9f0e55845a5ad1 374 PANTHER PTHR18895 81 374 8.5E-125 T 23-04-2016 LT40_RS19295 bde6e17a0dd397fbba9f0e55845a5ad1 374 Pfam PF05175 Methyltransferase small domain 202 371 1.4E-50 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 LT40_RS19295 bde6e17a0dd397fbba9f0e55845a5ad1 374 Gene3D G3DSA:3.40.50.150 206 344 4.1E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS19295 bde6e17a0dd397fbba9f0e55845a5ad1 374 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 303 309 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LT40_RS19295 bde6e17a0dd397fbba9f0e55845a5ad1 374 PIRSF PIRSF037565 1 374 1.5E-139 T 23-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS19295 bde6e17a0dd397fbba9f0e55845a5ad1 374 PANTHER PTHR18895:SF6 81 374 8.5E-125 T 23-04-2016 LT40_RS19295 bde6e17a0dd397fbba9f0e55845a5ad1 374 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 374 43.92 T 23-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 Gene3D G3DSA:3.40.190.10 192 264 7.6E-15 T 23-04-2016 LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 Pfam PF03466 LysR substrate binding domain 88 296 4.8E-46 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 Gene3D G3DSA:3.40.190.10 89 191 1.8E-19 T 23-04-2016 LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.1E-27 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 PANTHER PTHR30346 1 295 3.2E-86 T 23-04-2016 LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.5E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.5E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.5E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 Gene3D G3DSA:1.10.10.10 3 84 4.3E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 PANTHER PTHR30346:SF3 1 295 3.2E-86 T 23-04-2016 LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 SUPERFAMILY SSF53850 90 296 9.12E-42 T 23-04-2016 LT40_RS08140 9e70d0fc4cbf19547ecabdf49e2b4677 298 SUPERFAMILY SSF46785 3 111 6.73E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.823 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 SUPERFAMILY SSF69075 315 416 2.22E-25 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 PANTHER PTHR21089 270 357 1.7E-137 T 23-04-2016 LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 PANTHER PTHR21089 37 254 1.7E-137 T 23-04-2016 LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 SUPERFAMILY SSF69742 1 156 1.44E-47 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 9.6E-49 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 319 415 1.2E-21 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 PIRSF PIRSF000445 1 425 3.4E-152 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 4.8E-50 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 PANTHER PTHR21089:SF3 270 357 1.7E-137 T 23-04-2016 LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 PANTHER PTHR21089:SF3 37 254 1.7E-137 T 23-04-2016 LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 SUPERFAMILY SSF51735 160 313 1.8E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 Gene3D G3DSA:3.40.50.720 182 358 4.3E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19830 843460d3418560fd5d09c97a890054ef 425 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 414 9.6E-138 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 PANTHER PTHR24095 602 1320 3.6E-84 T 23-04-2016 LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 Pfam PF07993 Male sterility protein 1017 1151 1.4E-31 T 23-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 Pfam PF07993 Male sterility protein 1156 1242 6.0E-8 T 23-04-2016 IPR013120 Male sterility, NAD-binding Reactome: REACT_22258 LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 SUPERFAMILY SSF56801 409 876 2.88E-74 T 23-04-2016 LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 SUPERFAMILY SSF52540 3 211 4.18E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 Pfam PF00501 AMP-binding enzyme 423 792 1.4E-40 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 Pfam PF00550 Phosphopantetheine attachment site 904 965 4.5E-7 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 Gene3D G3DSA:3.40.50.980 420 575 1.2E-14 T 23-04-2016 LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 Gene3D G3DSA:3.40.50.720 1012 1249 8.5E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 Gene3D G3DSA:1.10.1200.10 895 973 1.0E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 Gene3D G3DSA:3.40.50.980 605 707 5.3E-15 T 23-04-2016 LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 Pfam PF13193 AMP-binding enzyme C-terminal domain 802 873 1.6E-5 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 Gene3D G3DSA:3.30.300.30 790 876 1.9E-13 T 23-04-2016 LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 Gene3D G3DSA:2.30.38.10 716 785 1.7E-13 T 23-04-2016 LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 SUPERFAMILY SSF51735 1013 1278 1.57E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18635 1931a015cad16cbbbed782786b225799 1361 SUPERFAMILY SSF47336 899 989 1.83E-7 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 PANTHER PTHR30537:SF16 1 288 1.3E-94 T 23-04-2016 LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 SUPERFAMILY SSF46785 3 85 1.65E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 Gene3D G3DSA:3.40.190.10 170 254 2.5E-25 T 23-04-2016 LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 8.6E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 Gene3D G3DSA:1.10.10.10 6 87 2.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 Gene3D G3DSA:3.40.190.10 94 169 1.4E-24 T 23-04-2016 LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 SUPERFAMILY SSF53850 93 287 2.53E-30 T 23-04-2016 LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 Pfam PF03466 LysR substrate binding domain 94 283 4.2E-28 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS03360 1c90875f43ce6c311b75ad3620db560a 300 PANTHER PTHR30537 1 288 1.3E-94 T 23-04-2016 LT40_RS05225 ed3aed0cd3a7db184abede4d19159334 254 Gene3D G3DSA:3.40.50.300 4 249 1.1E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05225 ed3aed0cd3a7db184abede4d19159334 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS05225 ed3aed0cd3a7db184abede4d19159334 254 PIRSF PIRSF039085 1 254 2.9E-114 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS05225 ed3aed0cd3a7db184abede4d19159334 254 SUPERFAMILY SSF52540 4 248 1.54E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05225 ed3aed0cd3a7db184abede4d19159334 254 PANTHER PTHR24220:SF347 5 254 2.0E-151 T 23-04-2016 LT40_RS05225 ed3aed0cd3a7db184abede4d19159334 254 PANTHER PTHR24220 5 254 2.0E-151 T 23-04-2016 LT40_RS05225 ed3aed0cd3a7db184abede4d19159334 254 SMART SM00382 28 226 3.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS05225 ed3aed0cd3a7db184abede4d19159334 254 Pfam PF00005 ABC transporter 19 178 1.6E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 PANTHER PTHR22572:SF115 4 446 1.7E-215 T 23-04-2016 LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 PANTHER PTHR22572 4 446 1.7E-215 T 23-04-2016 LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 Gene3D G3DSA:2.160.10.10 320 450 6.2E-31 T 23-04-2016 LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 262 296 1.0E-7 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 425 4.3E-4 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 SUPERFAMILY SSF53448 1 249 8.76E-62 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 Gene3D G3DSA:3.90.550.10 1 244 2.5E-67 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 SUPERFAMILY SSF51161 252 435 3.5E-46 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 Pfam PF12804 MobA-like NTP transferase domain 6 121 7.2E-22 T 23-04-2016 IPR025877 MobA-like NTP transferase LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 451 6.7E-195 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 Gene3D G3DSA:2.160.10.10 245 319 8.8E-18 T 23-04-2016 LT40_RS16135 cd299a252dd2dd99ca31d0961d845e8c 455 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.688 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 LT40_RS20580 bc7d44b524d9d0c0d5af8e2ebe38fe3b 827 Pfam PF01553 Acyltransferase 294 428 1.4E-20 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LT40_RS20580 bc7d44b524d9d0c0d5af8e2ebe38fe3b 827 SMART SM00563 304 431 2.0E-27 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LT40_RS20580 bc7d44b524d9d0c0d5af8e2ebe38fe3b 827 PIRSF PIRSF500064 4 826 0.0 T 23-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LT40_RS20580 bc7d44b524d9d0c0d5af8e2ebe38fe3b 827 PANTHER PTHR12563 1 130 0.0 T 23-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LT40_RS20580 bc7d44b524d9d0c0d5af8e2ebe38fe3b 827 PANTHER PTHR12563 149 823 0.0 T 23-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LT40_RS20580 bc7d44b524d9d0c0d5af8e2ebe38fe3b 827 PIRSF PIRSF000437 21 825 2.6E-297 T 23-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LT40_RS20580 bc7d44b524d9d0c0d5af8e2ebe38fe3b 827 SUPERFAMILY SSF69593 242 519 3.92E-35 T 23-04-2016 LT40_RS20580 bc7d44b524d9d0c0d5af8e2ebe38fe3b 827 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 14 812 0.0 T 23-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LT40_RS20580 bc7d44b524d9d0c0d5af8e2ebe38fe3b 827 PANTHER PTHR12563:SF14 1 130 0.0 T 23-04-2016 LT40_RS20580 bc7d44b524d9d0c0d5af8e2ebe38fe3b 827 PANTHER PTHR12563:SF14 149 823 0.0 T 23-04-2016 LT40_RS20580 bc7d44b524d9d0c0d5af8e2ebe38fe3b 827 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 15 816 29.834 T 23-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 LT40_RS03795 225375cb61cabba1cb65efbee3c2b10f 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 1.3E-122 T 23-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 LT40_RS03795 225375cb61cabba1cb65efbee3c2b10f 241 SMART SM00382 28 229 3.4E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS03795 225375cb61cabba1cb65efbee3c2b10f 241 PANTHER PTHR24220:SF497 5 238 1.1E-145 T 23-04-2016 LT40_RS03795 225375cb61cabba1cb65efbee3c2b10f 241 Pfam PF00005 ABC transporter 20 166 6.9E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS03795 225375cb61cabba1cb65efbee3c2b10f 241 PANTHER PTHR24220 5 238 1.1E-145 T 23-04-2016 LT40_RS03795 225375cb61cabba1cb65efbee3c2b10f 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS03795 225375cb61cabba1cb65efbee3c2b10f 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 1.5E-5 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LT40_RS03795 225375cb61cabba1cb65efbee3c2b10f 241 SUPERFAMILY SSF52540 3 236 5.21E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03795 225375cb61cabba1cb65efbee3c2b10f 241 Gene3D G3DSA:3.40.50.300 3 233 5.7E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02295 58e41b4610b40d6b57b17753a63656bb 135 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 133 1.0E-41 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 LT40_RS02295 58e41b4610b40d6b57b17753a63656bb 135 PANTHER PTHR30435:SF12 2 135 6.6E-49 T 23-04-2016 LT40_RS02295 58e41b4610b40d6b57b17753a63656bb 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site LT40_RS02295 58e41b4610b40d6b57b17753a63656bb 135 PANTHER PTHR30435 2 135 6.6E-49 T 23-04-2016 LT40_RS02295 58e41b4610b40d6b57b17753a63656bb 135 Pfam PF00460 Flagella basal body rod protein 11 39 8.6E-8 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LT40_RS02295 58e41b4610b40d6b57b17753a63656bb 135 PIRSF PIRSF002889 1 135 8.0E-47 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 LT40_RS15160 16e11fe12efcea4188f1d42af89a20e9 208 Gene3D G3DSA:3.40.30.10 2 87 2.2E-19 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS15160 16e11fe12efcea4188f1d42af89a20e9 208 PANTHER PTHR11260 1 204 6.0E-71 T 23-04-2016 LT40_RS15160 16e11fe12efcea4188f1d42af89a20e9 208 SUPERFAMILY SSF52833 1 78 2.33E-19 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS15160 16e11fe12efcea4188f1d42af89a20e9 208 PANTHER PTHR11260:SF282 1 204 6.0E-71 T 23-04-2016 LT40_RS15160 16e11fe12efcea4188f1d42af89a20e9 208 Gene3D G3DSA:1.20.1050.10 92 198 1.1E-20 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS15160 16e11fe12efcea4188f1d42af89a20e9 208 SUPERFAMILY SSF47616 93 201 4.04E-22 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS15160 16e11fe12efcea4188f1d42af89a20e9 208 Pfam PF14497 Glutathione S-transferase, C-terminal domain 129 199 4.0E-8 T 23-04-2016 IPR004046 Glutathione S-transferase, C-terminal LT40_RS15160 16e11fe12efcea4188f1d42af89a20e9 208 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 73 1.8E-15 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 PRINTS PR00996 Glutamate methyltransferase family signature 74 86 6.9E-25 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 PRINTS PR00996 Glutamate methyltransferase family signature 142 158 6.9E-25 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 PRINTS PR00996 Glutamate methyltransferase family signature 216 230 6.9E-25 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 PRINTS PR00996 Glutamate methyltransferase family signature 235 258 6.9E-25 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 PRINTS PR00996 Glutamate methyltransferase family signature 110 130 6.9E-25 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 SMART SM00138 15 278 3.5E-36 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 Gene3D G3DSA:3.40.50.150 81 278 8.6E-59 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 Pfam PF01739 CheR methyltransferase, SAM binding domain 83 259 2.3E-39 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 PANTHER PTHR24422:SF8 15 279 9.2E-102 T 23-04-2016 LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 PANTHER PTHR24422 15 279 9.2E-102 T 23-04-2016 LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 SUPERFAMILY SSF53335 82 260 7.77E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS09460 b6f2e8ca93d06c3cbb322b2c045c94a4 280 Pfam PF03705 CheR methyltransferase, all-alpha domain 17 68 1.3E-8 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 Gene3D G3DSA:3.40.50.300 5 223 6.9E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 PANTHER PTHR24220 7 379 2.6E-160 T 23-04-2016 LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 SUPERFAMILY SSF52540 6 223 3.65E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 SMART SM00382 279 474 7.8E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 SMART SM00382 30 218 2.4E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 SUPERFAMILY SSF52540 271 479 1.67E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 Pfam PF00005 ABC transporter 272 425 2.3E-17 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 Pfam PF00005 ABC transporter 21 170 8.3E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 PANTHER PTHR24220:SF516 7 379 2.6E-160 T 23-04-2016 LT40_RS09820 49c8a2d2ab024b5fc4e75c42eac6e9e6 499 Gene3D G3DSA:3.40.50.300 273 484 8.2E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17995 9a487ef7c753904d3a0b4747d297876d 102 Pfam PF01527 Transposase 3 76 1.0E-17 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 LT40_RS17995 9a487ef7c753904d3a0b4747d297876d 102 PANTHER PTHR33215:SF4 1 102 3.9E-49 T 23-04-2016 LT40_RS17995 9a487ef7c753904d3a0b4747d297876d 102 Gene3D G3DSA:1.10.10.60 9 92 3.1E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS17995 9a487ef7c753904d3a0b4747d297876d 102 PANTHER PTHR33215 1 102 3.9E-49 T 23-04-2016 LT40_RS17995 9a487ef7c753904d3a0b4747d297876d 102 SUPERFAMILY SSF46689 5 95 1.18E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS05980 80c589abca9ba7fd996e3666e8e4c2c5 544 Pfam PF13584 Oxygen tolerance 16 461 1.4E-99 T 23-04-2016 IPR025738 Aerotolerance-related protein BatD LT40_RS05980 80c589abca9ba7fd996e3666e8e4c2c5 544 PANTHER PTHR40940:SF1 1 542 1.2E-89 T 23-04-2016 LT40_RS05980 80c589abca9ba7fd996e3666e8e4c2c5 544 PANTHER PTHR40940 1 542 1.2E-89 T 23-04-2016 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 6.8E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 Gene3D G3DSA:3.30.565.10 267 426 3.5E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 SMART SM00388 203 269 1.5E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 SMART SM00387 310 428 9.1E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 SUPERFAMILY SSF55781 33 173 1.0E-24 T 23-04-2016 IPR029016 GAF domain-like LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 SMART SM00065 28 171 1.5E-9 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 Gene3D G3DSA:3.30.450.40 33 174 1.7E-10 T 23-04-2016 IPR029016 GAF domain-like LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 SUPERFAMILY SSF55874 260 424 9.17E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 PANTHER PTHR24423:SF438 120 137 1.1E-70 T 23-04-2016 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 PANTHER PTHR24423:SF438 187 424 1.1E-70 T 23-04-2016 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 SUPERFAMILY SSF47384 195 268 1.49E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 3.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 3.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 3.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 3.9E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 426 2.9E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 PANTHER PTHR24423 120 137 1.1E-70 T 23-04-2016 LT40_RS20835 be6c7d10e95688fe203fbc94098d46e2 430 PANTHER PTHR24423 187 424 1.1E-70 T 23-04-2016 LT40_RS13580 7f728963e4a81fef93c8f2116bf0cdc8 101 PANTHER PTHR33569:SF1 1 101 9.6E-65 T 23-04-2016 LT40_RS13580 7f728963e4a81fef93c8f2116bf0cdc8 101 PANTHER PTHR33569 1 101 9.6E-65 T 23-04-2016 LT40_RS13580 7f728963e4a81fef93c8f2116bf0cdc8 101 Pfam PF00699 Urease beta subunit 3 99 1.8E-45 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13580 7f728963e4a81fef93c8f2116bf0cdc8 101 Gene3D G3DSA:2.10.150.10 1 100 6.3E-50 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13580 7f728963e4a81fef93c8f2116bf0cdc8 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 3.2E-46 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13580 7f728963e4a81fef93c8f2116bf0cdc8 101 SUPERFAMILY SSF51278 1 101 3.79E-47 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13580 7f728963e4a81fef93c8f2116bf0cdc8 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 32.234 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS00205 5a63bb07c60498bf94477014d88aa06a 102 PANTHER PTHR33215:SF4 1 102 7.4E-51 T 23-04-2016 LT40_RS00205 5a63bb07c60498bf94477014d88aa06a 102 PANTHER PTHR33215 1 102 7.4E-51 T 23-04-2016 LT40_RS00205 5a63bb07c60498bf94477014d88aa06a 102 Gene3D G3DSA:1.10.10.60 9 92 5.3E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS00205 5a63bb07c60498bf94477014d88aa06a 102 Pfam PF01527 Transposase 3 76 5.5E-17 T 23-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 LT40_RS00205 5a63bb07c60498bf94477014d88aa06a 102 SUPERFAMILY SSF46689 5 95 1.24E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS18150 04ba79261095986b66881835f08ee163 224 Gene3D G3DSA:3.20.20.70 2 219 7.2E-94 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS18150 04ba79261095986b66881835f08ee163 224 PIRSF PIRSF001461 1 224 5.0E-103 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LT40_RS18150 04ba79261095986b66881835f08ee163 224 PANTHER PTHR11749:SF7 2 219 4.2E-144 T 23-04-2016 LT40_RS18150 04ba79261095986b66881835f08ee163 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 4.6E-89 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LT40_RS18150 04ba79261095986b66881835f08ee163 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 1.0E-98 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LT40_RS18150 04ba79261095986b66881835f08ee163 224 PANTHER PTHR11749 2 219 4.2E-144 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LT40_RS18150 04ba79261095986b66881835f08ee163 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LT40_RS18150 04ba79261095986b66881835f08ee163 224 SUPERFAMILY SSF51366 4 218 8.9E-76 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LT40_RS18150 04ba79261095986b66881835f08ee163 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LT40_RS08430 e9131f5fe81ea5379ff62a61cf51c7a3 464 PANTHER PTHR30576 25 464 1.5E-118 T 23-04-2016 LT40_RS08430 e9131f5fe81ea5379ff62a61cf51c7a3 464 PANTHER PTHR30576:SF0 25 464 1.5E-118 T 23-04-2016 LT40_RS08430 e9131f5fe81ea5379ff62a61cf51c7a3 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 26 461 3.2E-124 T 23-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase LT40_RS08430 e9131f5fe81ea5379ff62a61cf51c7a3 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 21 460 3.2E-128 T 23-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 LT40_RS08430 e9131f5fe81ea5379ff62a61cf51c7a3 464 SUPERFAMILY SSF51735 141 242 4.79E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08430 e9131f5fe81ea5379ff62a61cf51c7a3 464 Pfam PF13727 CoA-binding domain 77 238 4.0E-15 T 23-04-2016 LT40_RS08430 e9131f5fe81ea5379ff62a61cf51c7a3 464 Pfam PF02397 Bacterial sugar transferase 276 459 9.9E-54 T 23-04-2016 IPR003362 Bacterial sugar transferase LT40_RS14705 f9c81027f71afaf472ccb55417d1bbe9 284 SMART SM00450 158 278 5.4E-8 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14705 f9c81027f71afaf472ccb55417d1bbe9 284 SMART SM00450 7 135 2.2E-15 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14705 f9c81027f71afaf472ccb55417d1bbe9 284 SUPERFAMILY SSF52821 162 283 6.94E-31 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14705 f9c81027f71afaf472ccb55417d1bbe9 284 SUPERFAMILY SSF52821 2 155 2.49E-39 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14705 f9c81027f71afaf472ccb55417d1bbe9 284 Gene3D G3DSA:3.40.250.10 160 283 9.6E-35 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14705 f9c81027f71afaf472ccb55417d1bbe9 284 PANTHER PTHR11364 1 283 2.7E-91 T 23-04-2016 LT40_RS14705 f9c81027f71afaf472ccb55417d1bbe9 284 Gene3D G3DSA:3.40.250.10 3 154 7.2E-44 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14705 f9c81027f71afaf472ccb55417d1bbe9 284 PANTHER PTHR11364:SF0 1 283 2.7E-91 T 23-04-2016 LT40_RS14705 f9c81027f71afaf472ccb55417d1bbe9 284 Pfam PF00581 Rhodanese-like domain 161 273 2.6E-8 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14705 f9c81027f71afaf472ccb55417d1bbe9 284 Pfam PF00581 Rhodanese-like domain 8 131 7.8E-15 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS15925 66e899b9e8f62cddedf2b04359309701 306 PANTHER PTHR30177:SF6 12 282 2.6E-84 T 23-04-2016 LT40_RS15925 66e899b9e8f62cddedf2b04359309701 306 Gene3D G3DSA:3.40.190.100 114 230 6.0E-23 T 23-04-2016 LT40_RS15925 66e899b9e8f62cddedf2b04359309701 306 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 21 306 9.2E-130 T 23-04-2016 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 LT40_RS15925 66e899b9e8f62cddedf2b04359309701 306 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 28 278 9.0E-56 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LT40_RS15925 66e899b9e8f62cddedf2b04359309701 306 Gene3D G3DSA:3.40.190.10 231 294 2.0E-42 T 23-04-2016 LT40_RS15925 66e899b9e8f62cddedf2b04359309701 306 Gene3D G3DSA:3.40.190.10 23 109 2.0E-42 T 23-04-2016 LT40_RS15925 66e899b9e8f62cddedf2b04359309701 306 PANTHER PTHR30177 12 282 2.6E-84 T 23-04-2016 LT40_RS15925 66e899b9e8f62cddedf2b04359309701 306 SUPERFAMILY SSF53850 22 294 8.96E-80 T 23-04-2016 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 307 724 7.0E-115 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 ProSitePatterns PS00885 EPSP synthase signature 2. 640 658 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 309 733 33.467 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 Gene3D G3DSA:3.65.10.10 321 530 5.7E-63 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 ProSitePatterns PS00104 EPSP synthase signature 1. 388 402 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 Pfam PF02153 Prephenate dehydrogenase 16 272 2.7E-71 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 313 732 5.6E-127 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 SUPERFAMILY SSF48179 176 282 5.1E-34 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 SUPERFAMILY SSF55205 306 732 1.03E-131 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 PANTHER PTHR21090 306 734 7.7E-178 T 23-04-2016 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 PANTHER PTHR21090:SF5 306 734 7.7E-178 T 23-04-2016 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 Gene3D G3DSA:3.40.50.720 3 180 3.8E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 Gene3D G3DSA:3.65.10.10 531 732 5.7E-54 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 LT40_RS06160 1722ec9428c0d637d9090f15d38f1bca 740 SUPERFAMILY SSF51735 3 170 5.44E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11685 c562e120f95fad4427c5a6b3aaa9a19b 265 PANTHER PTHR30143 1 265 9.6E-45 T 23-04-2016 LT40_RS11685 c562e120f95fad4427c5a6b3aaa9a19b 265 Gene3D G3DSA:3.90.850.10 14 260 3.4E-49 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS11685 c562e120f95fad4427c5a6b3aaa9a19b 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 237 2.3E-7 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS11685 c562e120f95fad4427c5a6b3aaa9a19b 265 SUPERFAMILY SSF56529 15 260 1.05E-40 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS08290 29d44ab1fcd0d69a3b5e615c934d29f0 589 Gene3D G3DSA:1.20.1560.10 4 323 3.3E-28 T 23-04-2016 LT40_RS08290 29d44ab1fcd0d69a3b5e615c934d29f0 589 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS08290 29d44ab1fcd0d69a3b5e615c934d29f0 589 SUPERFAMILY SSF90123 4 324 8.5E-37 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS08290 29d44ab1fcd0d69a3b5e615c934d29f0 589 Pfam PF00664 ABC transporter transmembrane region 86 261 8.5E-15 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS08290 29d44ab1fcd0d69a3b5e615c934d29f0 589 PANTHER PTHR24221 21 577 9.5E-140 T 23-04-2016 LT40_RS08290 29d44ab1fcd0d69a3b5e615c934d29f0 589 Gene3D G3DSA:3.40.50.300 335 563 8.4E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08290 29d44ab1fcd0d69a3b5e615c934d29f0 589 SUPERFAMILY SSF52540 326 568 1.36E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08290 29d44ab1fcd0d69a3b5e615c934d29f0 589 SMART SM00382 361 547 6.3E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS08290 29d44ab1fcd0d69a3b5e615c934d29f0 589 Pfam PF00005 ABC transporter 352 501 2.5E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS03940 d3b45eef3fc4e47c09a2ca115dba7be8 202 SUPERFAMILY SSF50022 35 195 1.42E-39 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS03940 d3b45eef3fc4e47c09a2ca115dba7be8 202 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 12 45 4.2E-11 T 23-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 LT40_RS03940 d3b45eef3fc4e47c09a2ca115dba7be8 202 PANTHER PTHR10134:SF8 11 200 2.9E-92 T 23-04-2016 LT40_RS03940 d3b45eef3fc4e47c09a2ca115dba7be8 202 Gene3D G3DSA:2.102.10.10 11 194 6.0E-39 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS03940 d3b45eef3fc4e47c09a2ca115dba7be8 202 PRINTS PR00162 Rieske 2Fe-2S subunit signature 124 135 1.6E-9 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 LT40_RS03940 d3b45eef3fc4e47c09a2ca115dba7be8 202 PRINTS PR00162 Rieske 2Fe-2S subunit signature 168 180 1.6E-9 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 LT40_RS03940 d3b45eef3fc4e47c09a2ca115dba7be8 202 PRINTS PR00162 Rieske 2Fe-2S subunit signature 155 167 1.6E-9 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 LT40_RS03940 d3b45eef3fc4e47c09a2ca115dba7be8 202 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 14 196 3.9E-66 T 23-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 LT40_RS03940 d3b45eef3fc4e47c09a2ca115dba7be8 202 Pfam PF00355 Rieske [2Fe-2S] domain 119 183 4.9E-10 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS03940 d3b45eef3fc4e47c09a2ca115dba7be8 202 PANTHER PTHR10134 11 200 2.9E-92 T 23-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 LT40_RS19850 44c545a84f7e21773ca0f04ffaf5970a 263 Hamap MF_00258 Glutamate racemase [murI]. 4 255 36.767 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS19850 44c545a84f7e21773ca0f04ffaf5970a 263 SUPERFAMILY SSF53681 5 107 5.56E-32 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS19850 44c545a84f7e21773ca0f04ffaf5970a 263 SUPERFAMILY SSF53681 110 258 2.29E-38 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS19850 44c545a84f7e21773ca0f04ffaf5970a 263 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 215 1.6E-31 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS19850 44c545a84f7e21773ca0f04ffaf5970a 263 PANTHER PTHR21198:SF2 1 263 3.5E-99 T 23-04-2016 LT40_RS19850 44c545a84f7e21773ca0f04ffaf5970a 263 PANTHER PTHR21198 1 263 3.5E-99 T 23-04-2016 LT40_RS19850 44c545a84f7e21773ca0f04ffaf5970a 263 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 250 6.1E-67 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS19850 44c545a84f7e21773ca0f04ffaf5970a 263 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 23-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS19850 44c545a84f7e21773ca0f04ffaf5970a 263 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 23-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS19850 44c545a84f7e21773ca0f04ffaf5970a 263 Gene3D G3DSA:3.40.50.1860 2 173 3.5E-54 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS13605 5844be5835e4aad6e607201a77bbaf01 336 Pfam PF01594 Domain of unknown function DUF20 10 328 1.7E-6 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like LT40_RS08175 462c16c8859fa7e0689434999bd2965c 590 PANTHER PTHR36577:SF1 4 578 6.8E-259 T 23-04-2016 LT40_RS08175 462c16c8859fa7e0689434999bd2965c 590 Pfam PF04412 Protein of unknown function (DUF521) 162 563 1.4E-140 T 23-04-2016 IPR007506 Domain of unknown function DUF521 LT40_RS08175 462c16c8859fa7e0689434999bd2965c 590 SUPERFAMILY SSF52016 6 131 4.94E-35 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS08175 462c16c8859fa7e0689434999bd2965c 590 PANTHER PTHR36577 4 578 6.8E-259 T 23-04-2016 LT40_RS08175 462c16c8859fa7e0689434999bd2965c 590 PIRSF PIRSF036630 2 582 4.1E-245 T 23-04-2016 IPR012047 Uncharacterised conserved protein UCP036630 LT40_RS08175 462c16c8859fa7e0689434999bd2965c 590 SUPERFAMILY SSF53732 447 577 1.57E-5 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS08175 462c16c8859fa7e0689434999bd2965c 590 Pfam PF01989 Protein of unknown function DUF126 26 101 2.2E-32 T 23-04-2016 IPR002840 Domain of unknown function DUF126 LT40_RS08175 462c16c8859fa7e0689434999bd2965c 590 Gene3D G3DSA:3.50.30.10 6 134 9.9E-43 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LT40_RS10180 497e524aff1cf320b70a8a45a680d76b 345 SUPERFAMILY SSF81345 12 340 1.44E-71 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS10180 497e524aff1cf320b70a8a45a680d76b 345 PANTHER PTHR30472 10 345 8.1E-92 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LT40_RS10180 497e524aff1cf320b70a8a45a680d76b 345 Pfam PF01032 FecCD transport family 24 340 4.2E-83 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LT40_RS10180 497e524aff1cf320b70a8a45a680d76b 345 Gene3D G3DSA:1.10.3470.10 15 344 5.7E-95 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS13530 e2a6732146c1f1c176d2097baa83aac3 143 Pfam PF11162 Protein of unknown function (DUF2946) 21 140 1.6E-15 T 23-04-2016 IPR021333 Protein of unknown function DUF2946 LT40_RS15055 dc035d0be1e8d59db0013d6803495987 317 Pfam PF16220 Domain of unknown function (DUF4880) 17 58 1.8E-12 T 23-04-2016 IPR032623 FecR, N-terminal LT40_RS15055 dc035d0be1e8d59db0013d6803495987 317 Pfam PF16344 Domain of unknown function (DUF4974) 224 304 5.0E-7 T 23-04-2016 IPR032508 Protein FecR, C-terminal LT40_RS15055 dc035d0be1e8d59db0013d6803495987 317 PANTHER PTHR30273:SF2 9 317 1.4E-44 T 23-04-2016 LT40_RS15055 dc035d0be1e8d59db0013d6803495987 317 PIRSF PIRSF018266 8 317 2.8E-66 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component LT40_RS15055 dc035d0be1e8d59db0013d6803495987 317 Pfam PF04773 FecR protein 112 200 2.1E-14 T 23-04-2016 IPR006860 FecR protein LT40_RS15055 dc035d0be1e8d59db0013d6803495987 317 PANTHER PTHR30273 9 317 1.4E-44 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component LT40_RS09680 f34b8e2f0fb0e073c4db2fc1fe9bbdc7 603 PANTHER PTHR24221 15 603 5.4E-177 T 23-04-2016 LT40_RS09680 f34b8e2f0fb0e073c4db2fc1fe9bbdc7 603 PANTHER PTHR24221:SF157 15 603 5.4E-177 T 23-04-2016 LT40_RS09680 f34b8e2f0fb0e073c4db2fc1fe9bbdc7 603 SUPERFAMILY SSF90123 15 321 3.4E-24 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS09680 f34b8e2f0fb0e073c4db2fc1fe9bbdc7 603 Pfam PF00005 ABC transporter 373 528 6.9E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS09680 f34b8e2f0fb0e073c4db2fc1fe9bbdc7 603 Gene3D G3DSA:1.20.1560.10 16 321 4.6E-16 T 23-04-2016 LT40_RS09680 f34b8e2f0fb0e073c4db2fc1fe9bbdc7 603 SUPERFAMILY SSF52540 351 598 7.17E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09680 f34b8e2f0fb0e073c4db2fc1fe9bbdc7 603 Gene3D G3DSA:3.40.50.300 356 592 1.6E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09680 f34b8e2f0fb0e073c4db2fc1fe9bbdc7 603 SMART SM00382 382 574 1.2E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS09680 f34b8e2f0fb0e073c4db2fc1fe9bbdc7 603 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS15750 daaf4e9bc6e9a5d8e919f5196c042664 257 PANTHER PTHR30429 1 257 4.4E-135 T 23-04-2016 IPR004872 Lipoprotein NlpA family LT40_RS15750 daaf4e9bc6e9a5d8e919f5196c042664 257 SUPERFAMILY SSF53850 22 257 1.46E-82 T 23-04-2016 LT40_RS15750 daaf4e9bc6e9a5d8e919f5196c042664 257 PANTHER PTHR30429:SF0 1 257 4.4E-135 T 23-04-2016 LT40_RS15750 daaf4e9bc6e9a5d8e919f5196c042664 257 Pfam PF03180 NLPA lipoprotein 22 257 1.4E-98 T 23-04-2016 IPR004872 Lipoprotein NlpA family LT40_RS15750 daaf4e9bc6e9a5d8e919f5196c042664 257 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 43 255 1.2E-69 T 23-04-2016 IPR004872 Lipoprotein NlpA family LT40_RS15750 daaf4e9bc6e9a5d8e919f5196c042664 257 PIRSF PIRSF002854 1 257 6.5E-103 T 23-04-2016 IPR004872 Lipoprotein NlpA family LT40_RS15750 daaf4e9bc6e9a5d8e919f5196c042664 257 Gene3D G3DSA:3.40.190.10 19 148 2.0E-53 T 23-04-2016 LT40_RS12275 dac4120fe1f1dc69cd30e06bec644342 470 Gene3D G3DSA:2.20.200.10 311 343 2.2E-12 T 23-04-2016 LT40_RS12275 dac4120fe1f1dc69cd30e06bec644342 470 Gene3D G3DSA:2.20.200.10 114 137 2.2E-12 T 23-04-2016 LT40_RS12275 dac4120fe1f1dc69cd30e06bec644342 470 PANTHER PTHR30203:SF13 11 470 2.6E-174 T 23-04-2016 LT40_RS12275 dac4120fe1f1dc69cd30e06bec644342 470 SUPERFAMILY SSF56954 2 465 4.84E-96 T 23-04-2016 LT40_RS12275 dac4120fe1f1dc69cd30e06bec644342 470 Gene3D G3DSA:1.20.1600.10 138 310 1.5E-89 T 23-04-2016 LT40_RS12275 dac4120fe1f1dc69cd30e06bec644342 470 Gene3D G3DSA:1.20.1600.10 51 88 1.5E-89 T 23-04-2016 LT40_RS12275 dac4120fe1f1dc69cd30e06bec644342 470 Gene3D G3DSA:1.20.1600.10 348 462 1.5E-89 T 23-04-2016 LT40_RS12275 dac4120fe1f1dc69cd30e06bec644342 470 Pfam PF02321 Outer membrane efflux protein 278 459 4.3E-19 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS12275 dac4120fe1f1dc69cd30e06bec644342 470 Pfam PF02321 Outer membrane efflux protein 62 250 4.9E-19 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS12275 dac4120fe1f1dc69cd30e06bec644342 470 PANTHER PTHR30203 11 470 2.6E-174 T 23-04-2016 LT40_RS12275 dac4120fe1f1dc69cd30e06bec644342 470 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 461 8.0E-100 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LT40_RS08275 6ec4082b4596b01aa353a78eca31d7bb 260 Gene3D G3DSA:3.40.50.300 3 226 3.2E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08275 6ec4082b4596b01aa353a78eca31d7bb 260 SMART SM00382 26 213 1.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS08275 6ec4082b4596b01aa353a78eca31d7bb 260 PANTHER PTHR24220 3 243 7.3E-117 T 23-04-2016 LT40_RS08275 6ec4082b4596b01aa353a78eca31d7bb 260 SUPERFAMILY SSF52540 2 226 2.77E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08275 6ec4082b4596b01aa353a78eca31d7bb 260 Pfam PF00005 ABC transporter 17 164 1.8E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS08275 6ec4082b4596b01aa353a78eca31d7bb 260 PANTHER PTHR24220:SF471 3 243 7.3E-117 T 23-04-2016 LT40_RS08275 6ec4082b4596b01aa353a78eca31d7bb 260 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS10905 e2d547fe2cf61cd59b84d9840c375162 368 SUPERFAMILY SSF55347 135 301 1.18E-27 T 23-04-2016 LT40_RS10905 e2d547fe2cf61cd59b84d9840c375162 368 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 129 1.4E-19 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LT40_RS10905 e2d547fe2cf61cd59b84d9840c375162 368 Gene3D G3DSA:3.40.50.720 4 148 4.3E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10905 e2d547fe2cf61cd59b84d9840c375162 368 PANTHER PTHR22604 7 345 1.2E-65 T 23-04-2016 LT40_RS10905 e2d547fe2cf61cd59b84d9840c375162 368 SUPERFAMILY SSF51735 5 161 6.9E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10905 e2d547fe2cf61cd59b84d9840c375162 368 Gene3D G3DSA:3.30.360.10 149 336 1.9E-34 T 23-04-2016 LT40_RS10905 e2d547fe2cf61cd59b84d9840c375162 368 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 119 133 2.7E-9 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 LT40_RS10905 e2d547fe2cf61cd59b84d9840c375162 368 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 302 318 2.7E-9 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 LT40_RS10905 e2d547fe2cf61cd59b84d9840c375162 368 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 57 73 2.7E-9 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 LT40_RS10905 e2d547fe2cf61cd59b84d9840c375162 368 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 6 19 2.7E-9 T 23-04-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530|UniPathway: UPA00815 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 Gene3D G3DSA:3.40.50.2300 2 127 7.0E-35 T 23-04-2016 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 Pfam PF00072 Response regulator receiver domain 6 115 9.3E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 Gene3D G3DSA:1.10.8.60 318 375 5.0E-21 T 23-04-2016 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 9.5E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 9.5E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 SMART SM00448 4 115 2.9E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 SUPERFAMILY SSF46689 356 438 1.43E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 Gene3D G3DSA:1.10.10.60 389 439 9.4E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 SMART SM00382 165 312 6.7E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 PANTHER PTHR32071:SF11 1 439 3.2E-248 T 23-04-2016 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 SUPERFAMILY SSF52172 1 190 6.83E-43 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 SUPERFAMILY SSF52540 145 374 1.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 Gene3D G3DSA:3.40.50.300 144 317 7.5E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 PANTHER PTHR32071 1 439 3.2E-248 T 23-04-2016 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 Pfam PF02954 Bacterial regulatory protein, Fis family 396 436 4.7E-10 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS01190 0d9816bd661af47f8c955e48c5c469d3 439 Pfam PF00158 Sigma-54 interaction domain 145 311 2.6E-67 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS09895 2b541ca3090414adeeca572d330cbf96 389 SUPERFAMILY SSF51905 9 222 2.62E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09895 2b541ca3090414adeeca572d330cbf96 389 SUPERFAMILY SSF51905 315 373 2.62E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09895 2b541ca3090414adeeca572d330cbf96 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 349 367 2.9E-6 T 23-04-2016 LT40_RS09895 2b541ca3090414adeeca572d330cbf96 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 2.9E-6 T 23-04-2016 LT40_RS09895 2b541ca3090414adeeca572d330cbf96 389 Gene3D G3DSA:3.30.9.10 91 143 8.6E-17 T 23-04-2016 LT40_RS09895 2b541ca3090414adeeca572d330cbf96 389 Gene3D G3DSA:3.30.9.10 222 314 8.6E-17 T 23-04-2016 LT40_RS09895 2b541ca3090414adeeca572d330cbf96 389 PANTHER PTHR13847 9 372 1.2E-64 T 23-04-2016 LT40_RS09895 2b541ca3090414adeeca572d330cbf96 389 Pfam PF01266 FAD dependent oxidoreductase 10 353 1.9E-60 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS09895 2b541ca3090414adeeca572d330cbf96 389 Gene3D G3DSA:3.50.50.60 4 85 5.9E-62 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09895 2b541ca3090414adeeca572d330cbf96 389 Gene3D G3DSA:3.50.50.60 144 221 5.9E-62 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09895 2b541ca3090414adeeca572d330cbf96 389 Gene3D G3DSA:3.50.50.60 315 374 5.9E-62 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS13910 f988915ba3fba141e774815507a2c9bb 283 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 23-04-2016 IPR000540 Flagellar motor protein MotA, conserved site LT40_RS13910 f988915ba3fba141e774815507a2c9bb 283 PANTHER PTHR30433:SF4 1 283 1.9E-147 T 23-04-2016 IPR022522 Flagellar motor stator, MotA LT40_RS13910 f988915ba3fba141e774815507a2c9bb 283 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 239 3.0E-9 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LT40_RS13910 f988915ba3fba141e774815507a2c9bb 283 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 1.3E-112 T 23-04-2016 IPR022522 Flagellar motor stator, MotA LT40_RS13910 f988915ba3fba141e774815507a2c9bb 283 PANTHER PTHR30433 1 283 1.9E-147 T 23-04-2016 LT40_RS18305 bec66a0a176f882bf0757a2eb386269b 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.049 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 LT40_RS18305 bec66a0a176f882bf0757a2eb386269b 231 PIRSF PIRSF002155 1 227 8.4E-74 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 LT40_RS18305 bec66a0a176f882bf0757a2eb386269b 231 Gene3D G3DSA:3.30.190.20 18 68 5.7E-43 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 LT40_RS18305 bec66a0a176f882bf0757a2eb386269b 231 Gene3D G3DSA:3.30.190.20 161 225 5.7E-43 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 LT40_RS18305 bec66a0a176f882bf0757a2eb386269b 231 PANTHER PTHR23105 19 225 5.4E-75 T 23-04-2016 LT40_RS18305 bec66a0a176f882bf0757a2eb386269b 231 PANTHER PTHR23105:SF5 19 225 5.4E-75 T 23-04-2016 LT40_RS18305 bec66a0a176f882bf0757a2eb386269b 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.8E-101 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 LT40_RS18305 bec66a0a176f882bf0757a2eb386269b 231 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 2.3E-49 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein LT40_RS18305 bec66a0a176f882bf0757a2eb386269b 231 SUPERFAMILY SSF56808 6 225 3.53E-79 T 23-04-2016 IPR023674 Ribosomal protein L1-like LT40_RS18305 bec66a0a176f882bf0757a2eb386269b 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site LT40_RS18305 bec66a0a176f882bf0757a2eb386269b 231 Gene3D G3DSA:3.40.50.790 69 159 1.8E-38 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich LT40_RS05585 d356f57015226da9c66f2a5de8b2f7a4 360 PANTHER PTHR11835 2 360 3.2E-208 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LT40_RS05585 d356f57015226da9c66f2a5de8b2f7a4 360 SMART SM01329 4 353 2.8E-212 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LT40_RS05585 d356f57015226da9c66f2a5de8b2f7a4 360 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 1.6E-160 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 LT40_RS05585 d356f57015226da9c66f2a5de8b2f7a4 360 PANTHER PTHR11835:SF35 2 360 3.2E-208 T 23-04-2016 LT40_RS05585 d356f57015226da9c66f2a5de8b2f7a4 360 Gene3D G3DSA:3.40.718.10 2 357 2.7E-132 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LT40_RS05585 d356f57015226da9c66f2a5de8b2f7a4 360 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 53.155 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 LT40_RS05585 d356f57015226da9c66f2a5de8b2f7a4 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 2.0E-138 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LT40_RS05585 d356f57015226da9c66f2a5de8b2f7a4 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 LT40_RS05585 d356f57015226da9c66f2a5de8b2f7a4 360 SUPERFAMILY SSF53659 1 357 2.52E-126 T 23-04-2016 LT40_RS09920 73f3a8a9d0fdb322f0a794f239663250 290 PANTHER PTHR30193:SF32 12 287 3.0E-105 T 23-04-2016 LT40_RS09920 73f3a8a9d0fdb322f0a794f239663250 290 SUPERFAMILY SSF161098 12 284 8.63E-50 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09920 73f3a8a9d0fdb322f0a794f239663250 290 PANTHER PTHR30193 12 287 3.0E-105 T 23-04-2016 LT40_RS09920 73f3a8a9d0fdb322f0a794f239663250 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 274 1.3E-6 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09920 73f3a8a9d0fdb322f0a794f239663250 290 Gene3D G3DSA:1.10.3720.10 12 275 1.0E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PANTHER PTHR32063:SF21 799 1042 0.0 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PANTHER PTHR32063:SF21 1 781 0.0 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 Pfam PF00873 AcrB/AcrD/AcrF family 3 1032 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 SUPERFAMILY SSF82866 838 1034 1.83E-43 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 Gene3D G3DSA:3.30.70.1430 560 650 1.6E-8 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 Gene3D G3DSA:1.10.3850.10 817 1034 5.6E-50 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.1E-80 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.1E-80 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.1E-80 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.1E-80 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 2.1E-80 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.1E-80 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.1E-80 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 2.1E-80 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.1E-80 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 SUPERFAMILY SSF82693 136 182 3.5E-22 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 SUPERFAMILY SSF82693 268 324 3.5E-22 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 Gene3D G3DSA:3.30.2090.10 709 810 1.2E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 Gene3D G3DSA:3.30.2090.10 184 266 2.1E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 SUPERFAMILY SSF82714 709 809 7.32E-13 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 Gene3D G3DSA:1.20.1640.10 285 498 4.4E-59 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 SUPERFAMILY SSF82693 40 133 2.27E-23 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PANTHER PTHR32063 799 1042 0.0 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 PANTHER PTHR32063 1 781 0.0 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 SUPERFAMILY SSF82714 184 266 4.84E-16 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 Gene3D G3DSA:3.30.70.1430 40 141 1.7E-29 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 SUPERFAMILY SSF82693 557 654 4.34E-15 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 SUPERFAMILY SSF82693 812 861 3.09E-8 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 SUPERFAMILY SSF82693 668 707 3.09E-8 T 23-04-2016 LT40_RS10935 c8da2a6018b69916368743e0da8dcefa 1051 SUPERFAMILY SSF82866 290 490 1.57E-47 T 23-04-2016 LT40_RS06695 4d7452284c9f108859643aa5e176a3b6 302 PANTHER PTHR34308 1 300 1.1E-100 T 23-04-2016 LT40_RS06695 4d7452284c9f108859643aa5e176a3b6 302 Pfam PF03186 CobD/Cbib protein 8 282 3.4E-94 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 LT40_RS06695 4d7452284c9f108859643aa5e176a3b6 302 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 302 104.982 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 LT40_RS06695 4d7452284c9f108859643aa5e176a3b6 302 PANTHER PTHR34308:SF1 1 300 1.1E-100 T 23-04-2016 LT40_RS06695 4d7452284c9f108859643aa5e176a3b6 302 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 9 265 4.3E-58 T 23-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 LT40_RS12115 9e33f17ed5f9c2371c4a51555cda2604 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.9E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS12115 9e33f17ed5f9c2371c4a51555cda2604 300 PANTHER PTHR30126 1 300 4.4E-119 T 23-04-2016 LT40_RS12115 9e33f17ed5f9c2371c4a51555cda2604 300 Gene3D G3DSA:1.10.10.10 1 81 3.8E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12115 9e33f17ed5f9c2371c4a51555cda2604 300 Gene3D G3DSA:3.40.190.10 189 255 2.0E-11 T 23-04-2016 LT40_RS12115 9e33f17ed5f9c2371c4a51555cda2604 300 Pfam PF03466 LysR substrate binding domain 85 285 1.3E-45 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS12115 9e33f17ed5f9c2371c4a51555cda2604 300 SUPERFAMILY SSF46785 1 109 3.92E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12115 9e33f17ed5f9c2371c4a51555cda2604 300 Gene3D G3DSA:3.40.190.10 82 188 1.9E-26 T 23-04-2016 LT40_RS12115 9e33f17ed5f9c2371c4a51555cda2604 300 PANTHER PTHR30126:SF31 1 300 4.4E-119 T 23-04-2016 LT40_RS12115 9e33f17ed5f9c2371c4a51555cda2604 300 SUPERFAMILY SSF53850 86 286 1.5E-38 T 23-04-2016 LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 3.4E-21 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 3.4E-21 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 3.4E-21 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 3.4E-21 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 Gene3D G3DSA:2.30.330.10 240 320 6.5E-11 T 23-04-2016 LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 319 3.5E-19 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 PANTHER PTHR30034:SF0 4 321 5.6E-147 T 23-04-2016 LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 SUPERFAMILY SSF101801 247 321 5.75E-16 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 SUPERFAMILY SSF103039 55 230 3.66E-17 T 23-04-2016 IPR028976 CheC-like domain LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 SUPERFAMILY SSF103039 6 15 3.66E-17 T 23-04-2016 IPR028976 CheC-like domain LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 PIRSF PIRSF002888 3 322 3.7E-90 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 PANTHER PTHR30034 4 321 5.6E-147 T 23-04-2016 LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 320 3.1E-106 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LT40_RS02455 b9251a3d74ebae7f24233d7810cc0cab 322 Pfam PF02154 Flagellar motor switch protein FliM 38 229 2.9E-73 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 LT40_RS14860 44811a0225584523d5bc09ee656729b5 239 Pfam PF04452 RNA methyltransferase 19 233 1.3E-70 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS14860 44811a0225584523d5bc09ee656729b5 239 SUPERFAMILY SSF75217 74 239 1.44E-51 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases LT40_RS14860 44811a0225584523d5bc09ee656729b5 239 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 18 237 9.5E-63 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS14860 44811a0225584523d5bc09ee656729b5 239 SUPERFAMILY SSF88697 3 68 3.73E-15 T 23-04-2016 IPR015947 PUA-like domain LT40_RS14860 44811a0225584523d5bc09ee656729b5 239 PANTHER PTHR30027 1 239 8.1E-90 T 23-04-2016 LT40_RS14860 44811a0225584523d5bc09ee656729b5 239 Gene3D G3DSA:2.40.240.20 1 68 3.2E-24 T 23-04-2016 LT40_RS14860 44811a0225584523d5bc09ee656729b5 239 PIRSF PIRSF015601 3 238 2.6E-57 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS14860 44811a0225584523d5bc09ee656729b5 239 PANTHER PTHR30027:SF3 1 239 8.1E-90 T 23-04-2016 LT40_RS14860 44811a0225584523d5bc09ee656729b5 239 Gene3D G3DSA:3.40.1280.10 75 238 2.3E-60 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 59 6.8E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 SUPERFAMILY SSF46785 1 86 1.42E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 PANTHER PTHR30293 1 287 5.9E-94 T 23-04-2016 LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 PANTHER PTHR30293:SF0 1 287 5.9E-94 T 23-04-2016 LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 Gene3D G3DSA:3.40.190.10 90 179 2.7E-12 T 23-04-2016 LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 Gene3D G3DSA:1.10.10.10 1 84 4.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 SUPERFAMILY SSF53850 89 288 6.88E-30 T 23-04-2016 LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 Gene3D G3DSA:3.40.190.10 180 260 2.0E-10 T 23-04-2016 LT40_RS17235 7c1513335b6fb3c619f8994b429d500d 291 Pfam PF03466 LysR substrate binding domain 87 287 4.4E-31 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS18880 b168537c38ce3325be34ceb73af575ea 501 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 450 1.9E-96 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 LT40_RS18880 b168537c38ce3325be34ceb73af575ea 501 Pfam PF00795 Carbon-nitrogen hydrolase 227 468 1.4E-31 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS18880 b168537c38ce3325be34ceb73af575ea 501 Gene3D G3DSA:3.60.110.10 218 469 4.2E-30 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS18880 b168537c38ce3325be34ceb73af575ea 501 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 488 22.725 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 LT40_RS18880 b168537c38ce3325be34ceb73af575ea 501 SUPERFAMILY SSF56317 219 482 1.44E-48 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS18880 b168537c38ce3325be34ceb73af575ea 501 PANTHER PTHR38686 1 497 6.3E-104 T 23-04-2016 LT40_RS08060 a6aaaffb909c7c2538663a1883e11792 152 Pfam PF04134 Protein of unknown function, DUF393 11 117 2.5E-17 T 23-04-2016 IPR007263 Protein of unknown function DUF393 LT40_RS08060 a6aaaffb909c7c2538663a1883e11792 152 PANTHER PTHR34290 5 114 9.8E-23 T 23-04-2016 LT40_RS06645 32313bcd361fc7d981a7b7846502c12d 352 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 346 45.563 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS06645 32313bcd361fc7d981a7b7846502c12d 352 SUPERFAMILY SSF55326 7 170 7.48E-51 T 23-04-2016 LT40_RS06645 32313bcd361fc7d981a7b7846502c12d 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 344 1.3E-38 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS06645 32313bcd361fc7d981a7b7846502c12d 352 Gene3D G3DSA:3.90.650.10 171 345 7.9E-66 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS06645 32313bcd361fc7d981a7b7846502c12d 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 58 164 5.0E-15 T 23-04-2016 IPR016188 PurM-like, N-terminal domain LT40_RS06645 32313bcd361fc7d981a7b7846502c12d 352 Gene3D G3DSA:3.30.1330.10 22 170 5.1E-60 T 23-04-2016 IPR016188 PurM-like, N-terminal domain LT40_RS06645 32313bcd361fc7d981a7b7846502c12d 352 PANTHER PTHR10520 7 349 1.8E-209 T 23-04-2016 LT40_RS06645 32313bcd361fc7d981a7b7846502c12d 352 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 336 5.0E-141 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 LT40_RS06645 32313bcd361fc7d981a7b7846502c12d 352 SUPERFAMILY SSF56042 171 343 1.15E-60 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS17715 ee798f4d283a23b639a84bf05aa95638 1097 SUPERFAMILY SSF49785 958 1076 1.45E-5 T 23-04-2016 IPR008979 Galactose-binding domain-like LT40_RS18795 0070cf9b1cc3caddbf4fc0c303e240b8 129 Pfam PF02410 Ribosomal silencing factor during starvation 19 110 5.7E-28 T 23-04-2016 LT40_RS18795 0070cf9b1cc3caddbf4fc0c303e240b8 129 PANTHER PTHR21043 13 113 7.1E-41 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LT40_RS18795 0070cf9b1cc3caddbf4fc0c303e240b8 129 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 16 110 8.3E-35 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LT40_RS18795 0070cf9b1cc3caddbf4fc0c303e240b8 129 SUPERFAMILY SSF81301 9 115 2.78E-36 T 23-04-2016 LT40_RS18795 0070cf9b1cc3caddbf4fc0c303e240b8 129 Gene3D G3DSA:3.30.460.10 10 113 2.9E-37 T 23-04-2016 LT40_RS18795 0070cf9b1cc3caddbf4fc0c303e240b8 129 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 9 111 23.667 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LT40_RS18420 d6e3505df2c055ba091d543680141861 101 SUPERFAMILY SSF57716 2 101 2.42E-36 T 23-04-2016 LT40_RS18420 d6e3505df2c055ba091d543680141861 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.95 T 23-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid LT40_RS18420 d6e3505df2c055ba091d543680141861 101 PANTHER PTHR19836 1 101 1.2E-54 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18420 d6e3505df2c055ba091d543680141861 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 1.5E-23 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18420 d6e3505df2c055ba091d543680141861 101 Gene3D G3DSA:4.10.830.10 41 101 9.1E-28 T 23-04-2016 LT40_RS14805 0f4dfbe360a71bf612ccc2a5510b3042 406 PANTHER PTHR21180 134 401 6.8E-105 T 23-04-2016 LT40_RS14805 0f4dfbe360a71bf612ccc2a5510b3042 406 PANTHER PTHR21180:SF9 134 401 6.8E-105 T 23-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative LT40_RS14805 0f4dfbe360a71bf612ccc2a5510b3042 406 SUPERFAMILY SSF47781 300 373 2.15E-9 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LT40_RS14805 0f4dfbe360a71bf612ccc2a5510b3042 406 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 4 396 1.3E-162 T 23-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative LT40_RS14805 0f4dfbe360a71bf612ccc2a5510b3042 406 Gene3D G3DSA:3.20.20.70 52 192 1.8E-10 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS14805 0f4dfbe360a71bf612ccc2a5510b3042 406 SUPERFAMILY SSF102114 45 192 3.14E-15 T 23-04-2016 LT40_RS00220 a4cdd913c39dc48a3a9814d21a60ac8d 189 Gene3D G3DSA:3.40.630.30 7 185 1.4E-41 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS00220 a4cdd913c39dc48a3a9814d21a60ac8d 189 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 1.1E-17 T 23-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LT40_RS00220 a4cdd913c39dc48a3a9814d21a60ac8d 189 PRINTS PR01549 Autoinducer synthesis protein signature 42 64 1.1E-17 T 23-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LT40_RS00220 a4cdd913c39dc48a3a9814d21a60ac8d 189 PRINTS PR01549 Autoinducer synthesis protein signature 116 137 1.1E-17 T 23-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LT40_RS00220 a4cdd913c39dc48a3a9814d21a60ac8d 189 PRINTS PR01549 Autoinducer synthesis protein signature 138 159 1.1E-17 T 23-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LT40_RS00220 a4cdd913c39dc48a3a9814d21a60ac8d 189 PRINTS PR01549 Autoinducer synthesis protein signature 66 84 1.1E-17 T 23-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LT40_RS00220 a4cdd913c39dc48a3a9814d21a60ac8d 189 ProSitePatterns PS00949 Autoinducer synthase family signature. 23 51 - T 23-04-2016 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LT40_RS00220 a4cdd913c39dc48a3a9814d21a60ac8d 189 PANTHER PTHR39322 2 178 1.7E-30 T 23-04-2016 LT40_RS00220 a4cdd913c39dc48a3a9814d21a60ac8d 189 Pfam PF00765 Autoinducer synthase 13 177 3.2E-18 T 23-04-2016 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 LT40_RS00220 a4cdd913c39dc48a3a9814d21a60ac8d 189 SUPERFAMILY SSF55729 1 177 6.87E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS13020 da80af295570b2e9f127331acae2cb11 566 Pfam PF02652 L-lactate permease 16 554 1.3E-211 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 LT40_RS13020 da80af295570b2e9f127331acae2cb11 566 PANTHER PTHR30003 2 566 0.0 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 LT40_RS13020 da80af295570b2e9f127331acae2cb11 566 PANTHER PTHR30003:SF6 2 566 0.0 T 23-04-2016 LT40_RS13020 da80af295570b2e9f127331acae2cb11 566 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 558 1.9E-227 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 LT40_RS20020 0d9d984cc71db82b3e1f5d6e2f01ab5b 219 Gene3D G3DSA:2.60.40.360 20 136 1.5E-42 T 23-04-2016 IPR008962 PapD-like LT40_RS20020 0d9d984cc71db82b3e1f5d6e2f01ab5b 219 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 20 136 1.9E-39 T 23-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LT40_RS20020 0d9d984cc71db82b3e1f5d6e2f01ab5b 219 SUPERFAMILY SSF49584 139 216 7.85E-22 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal LT40_RS20020 0d9d984cc71db82b3e1f5d6e2f01ab5b 219 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 159 214 1.7E-15 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal LT40_RS20020 0d9d984cc71db82b3e1f5d6e2f01ab5b 219 PANTHER PTHR30251 1 213 3.5E-66 T 23-04-2016 LT40_RS20020 0d9d984cc71db82b3e1f5d6e2f01ab5b 219 PRINTS PR00969 Pili chaperone signature 21 30 3.2E-26 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS20020 0d9d984cc71db82b3e1f5d6e2f01ab5b 219 PRINTS PR00969 Pili chaperone signature 118 133 3.2E-26 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS20020 0d9d984cc71db82b3e1f5d6e2f01ab5b 219 PRINTS PR00969 Pili chaperone signature 153 168 3.2E-26 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS20020 0d9d984cc71db82b3e1f5d6e2f01ab5b 219 PRINTS PR00969 Pili chaperone signature 68 89 3.2E-26 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS20020 0d9d984cc71db82b3e1f5d6e2f01ab5b 219 Gene3D G3DSA:2.60.40.1070 140 216 4.4E-23 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal LT40_RS20020 0d9d984cc71db82b3e1f5d6e2f01ab5b 219 SUPERFAMILY SSF49354 17 136 1.73E-37 T 23-04-2016 IPR008962 PapD-like LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 PANTHER PTHR24322 11 146 2.2E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 PANTHER PTHR24322 162 194 2.2E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 Gene3D G3DSA:3.40.50.720 2 255 3.0E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 SUPERFAMILY SSF51735 6 255 3.78E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 PANTHER PTHR24322:SF317 11 146 2.2E-57 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 PANTHER PTHR24322:SF317 162 194 2.2E-57 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 PIRSF PIRSF000094 1 263 6.1E-111 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 8.1E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 8.1E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 8.1E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 8.1E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 8.1E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02125 fb32dccae8012600b1fd52f962ae0f62 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 255 7.1E-84 T 23-04-2016 LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 Pfam PF01467 Cytidylyltransferase-like 344 434 1.0E-14 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 471 5.2E-64 T 23-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 SUPERFAMILY SSF52374 340 470 1.41E-24 T 23-04-2016 LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 341 407 1.1E-16 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 Pfam PF00294 pfkB family carbohydrate kinase 13 304 1.0E-45 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 SUPERFAMILY SSF53613 12 309 4.05E-57 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 PANTHER PTHR10584:SF159 1 339 2.5E-142 T 23-04-2016 LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 PANTHER PTHR10584 1 339 2.5E-142 T 23-04-2016 LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 4.4E-124 T 23-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 473 42.711 T 23-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 Gene3D G3DSA:3.40.50.620 339 457 3.4E-35 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS17800 fd17f32f4f76b03654d58bfbd405a68b 473 Gene3D G3DSA:3.40.1190.20 12 313 1.1E-62 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS13630 02e0ddad8f0079b924378b10bf29ec73 208 PANTHER PTHR30055:SF39 1 203 2.4E-77 T 23-04-2016 LT40_RS13630 02e0ddad8f0079b924378b10bf29ec73 208 PANTHER PTHR30055 1 203 2.4E-77 T 23-04-2016 LT40_RS13630 02e0ddad8f0079b924378b10bf29ec73 208 Gene3D G3DSA:1.10.357.10 3 197 1.1E-25 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS13630 02e0ddad8f0079b924378b10bf29ec73 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 1.0E-9 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS13630 02e0ddad8f0079b924378b10bf29ec73 208 SUPERFAMILY SSF46689 3 74 2.36E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 SUPERFAMILY SSF55785 71 137 2.97E-9 T 23-04-2016 IPR000014 PAS domain LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 SMART SM00091 78 141 1.3E-6 T 23-04-2016 IPR000014 PAS domain LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 Pfam PF13188 PAS domain 79 133 2.3E-10 T 23-04-2016 IPR000014 PAS domain LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 SMART SM00388 184 250 6.2E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 341 9.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 393 9.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 374 9.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 355 9.1E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 SUPERFAMILY SSF47384 179 248 1.96E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 Pfam PF00512 His Kinase A (phospho-acceptor) domain 184 248 2.6E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 Gene3D G3DSA:1.10.287.130 179 246 5.8E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 PANTHER PTHR24423 65 402 1.9E-70 T 23-04-2016 LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 SMART SM00387 290 396 1.6E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 Gene3D G3DSA:3.30.565.10 259 394 1.5E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 Gene3D G3DSA:3.30.450.20 73 126 2.2E-9 T 23-04-2016 LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 SUPERFAMILY SSF55874 255 397 3.67E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS02390 16ef7d0349c1765f3e30c0f6dd05dae3 402 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 293 394 8.9E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS17070 7bd1162e9e9e727339e1f9b86bed66cb 211 PANTHER PTHR12907 13 206 1.2E-64 T 23-04-2016 LT40_RS17070 7bd1162e9e9e727339e1f9b86bed66cb 211 PANTHER PTHR12907:SF14 13 206 1.2E-64 T 23-04-2016 LT40_RS17070 7bd1162e9e9e727339e1f9b86bed66cb 211 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 114 204 7.1E-21 T 23-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 LT40_RS17070 7bd1162e9e9e727339e1f9b86bed66cb 211 SMART SM00702 23 204 5.0E-25 T 23-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 LT40_RS20300 fd9ee4db38e1f5de89456d10cde98273 185 PANTHER PTHR36699 47 185 1.2E-54 T 23-04-2016 LT40_RS20300 fd9ee4db38e1f5de89456d10cde98273 185 Pfam PF03734 L,D-transpeptidase catalytic domain 52 183 4.6E-17 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 LT40_RS20300 fd9ee4db38e1f5de89456d10cde98273 185 Gene3D G3DSA:2.40.440.10 49 184 1.3E-18 T 23-04-2016 LT40_RS20300 fd9ee4db38e1f5de89456d10cde98273 185 SUPERFAMILY SSF141523 49 184 1.09E-22 T 23-04-2016 LT40_RS11600 c070358324ec2704d627d4e941f4f471 277 SUPERFAMILY SSF53474 14 263 1.76E-59 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS11600 c070358324ec2704d627d4e941f4f471 277 PANTHER PTHR10992 15 264 6.5E-50 T 23-04-2016 LT40_RS11600 c070358324ec2704d627d4e941f4f471 277 Gene3D G3DSA:3.40.50.1820 14 264 7.8E-61 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS11600 c070358324ec2704d627d4e941f4f471 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 2.0E-11 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS11600 c070358324ec2704d627d4e941f4f471 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 2.0E-11 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS11600 c070358324ec2704d627d4e941f4f471 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 2.0E-11 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS11600 c070358324ec2704d627d4e941f4f471 277 Pfam PF00561 alpha/beta hydrolase fold 22 243 1.1E-22 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS11600 c070358324ec2704d627d4e941f4f471 277 PRINTS PR00412 Epoxide hydrolase signature 105 118 8.9E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS11600 c070358324ec2704d627d4e941f4f471 277 PRINTS PR00412 Epoxide hydrolase signature 47 62 8.9E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS11600 c070358324ec2704d627d4e941f4f471 277 PRINTS PR00412 Epoxide hydrolase signature 239 261 8.9E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS20420 fdcce61f14a5a708572b9eb56720212b 368 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 338 1.8E-72 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LT40_RS20420 fdcce61f14a5a708572b9eb56720212b 368 PANTHER PTHR22893 1 355 1.6E-169 T 23-04-2016 LT40_RS20420 fdcce61f14a5a708572b9eb56720212b 368 SUPERFAMILY SSF51395 1 350 3.95E-118 T 23-04-2016 LT40_RS20420 fdcce61f14a5a708572b9eb56720212b 368 PANTHER PTHR22893:SF7 1 355 1.6E-169 T 23-04-2016 LT40_RS20420 fdcce61f14a5a708572b9eb56720212b 368 Gene3D G3DSA:3.20.20.70 1 342 2.2E-130 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS12400 5856c443166fd2336f7565e9990260da 424 SUPERFAMILY SSF53756 1 412 4.54E-66 T 23-04-2016 LT40_RS12400 5856c443166fd2336f7565e9990260da 424 Gene3D G3DSA:3.40.50.2000 13 199 1.8E-14 T 23-04-2016 LT40_RS12400 5856c443166fd2336f7565e9990260da 424 PANTHER PTHR11926 212 382 1.0E-17 T 23-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 LT40_RS12400 5856c443166fd2336f7565e9990260da 424 PANTHER PTHR11926 1 183 1.0E-17 T 23-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 LT40_RS12400 5856c443166fd2336f7565e9990260da 424 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 7 381 1.3E-12 T 23-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 LT40_RS12400 5856c443166fd2336f7565e9990260da 424 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 13 411 1.8E-35 T 23-04-2016 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 LT40_RS12400 5856c443166fd2336f7565e9990260da 424 Gene3D G3DSA:3.40.50.2000 246 384 7.0E-24 T 23-04-2016 LT40_RS12400 5856c443166fd2336f7565e9990260da 424 ProSitePatterns PS00375 UDP-glycosyltransferases signature. 307 348 - T 23-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 LT40_RS03735 6fa7743d83347b1ae13a8044df8fef7b 173 PANTHER PTHR38101 6 173 5.6E-69 T 23-04-2016 LT40_RS03735 6fa7743d83347b1ae13a8044df8fef7b 173 Gene3D G3DSA:1.10.60.30 23 97 2.6E-26 T 23-04-2016 IPR023153 PSPTO4464-like domain LT40_RS03735 6fa7743d83347b1ae13a8044df8fef7b 173 PIRSF PIRSF016183 2 171 3.6E-65 T 23-04-2016 IPR006839 Ribosome-associated, YjgA LT40_RS03735 6fa7743d83347b1ae13a8044df8fef7b 173 PANTHER PTHR38101:SF1 6 173 5.6E-69 T 23-04-2016 LT40_RS03735 6fa7743d83347b1ae13a8044df8fef7b 173 Pfam PF04751 Protein of unknown function (DUF615) 12 163 1.1E-52 T 23-04-2016 IPR006839 Ribosome-associated, YjgA LT40_RS03735 6fa7743d83347b1ae13a8044df8fef7b 173 Gene3D G3DSA:1.10.60.30 99 169 9.4E-29 T 23-04-2016 IPR023153 PSPTO4464-like domain LT40_RS03735 6fa7743d83347b1ae13a8044df8fef7b 173 SUPERFAMILY SSF158710 23 165 3.92E-49 T 23-04-2016 LT40_RS12375 fa8fb04f59ba6e4d577484004f393c8e 237 SMART SM00382 30 199 4.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS12375 fa8fb04f59ba6e4d577484004f393c8e 237 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS12375 fa8fb04f59ba6e4d577484004f393c8e 237 SUPERFAMILY SSF52540 12 217 5.93E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12375 fa8fb04f59ba6e4d577484004f393c8e 237 PANTHER PTHR24220:SF589 7 223 7.1E-72 T 23-04-2016 LT40_RS12375 fa8fb04f59ba6e4d577484004f393c8e 237 Gene3D G3DSA:3.40.50.300 5 196 4.6E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS12375 fa8fb04f59ba6e4d577484004f393c8e 237 PANTHER PTHR24220 7 223 7.1E-72 T 23-04-2016 LT40_RS12375 fa8fb04f59ba6e4d577484004f393c8e 237 Pfam PF00005 ABC transporter 21 148 4.5E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS12295 94b482fd797dca169de7b17527886999 862 Gene3D G3DSA:2.40.50.140 418 537 5.0E-46 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS12295 94b482fd797dca169de7b17527886999 862 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 235 536 2.1E-108 T 23-04-2016 IPR014146 DNA ligase D, ligase domain LT40_RS12295 94b482fd797dca169de7b17527886999 862 PANTHER PTHR10459:SF70 228 539 3.1E-73 T 23-04-2016 LT40_RS12295 94b482fd797dca169de7b17527886999 862 SUPERFAMILY SSF56091 218 416 1.68E-45 T 23-04-2016 LT40_RS12295 94b482fd797dca169de7b17527886999 862 Pfam PF04679 ATP dependent DNA ligase C terminal region 434 530 1.8E-24 T 23-04-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Reactome: REACT_216 LT40_RS12295 94b482fd797dca169de7b17527886999 862 PANTHER PTHR10459 228 539 3.1E-73 T 23-04-2016 LT40_RS12295 94b482fd797dca169de7b17527886999 862 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 245 845 1.7E-228 T 23-04-2016 IPR014143 DNA ligase D LT40_RS12295 94b482fd797dca169de7b17527886999 862 Gene3D G3DSA:3.30.1490.70 373 416 2.5E-16 T 23-04-2016 LT40_RS12295 94b482fd797dca169de7b17527886999 862 Gene3D G3DSA:3.30.1490.70 228 256 2.5E-16 T 23-04-2016 LT40_RS12295 94b482fd797dca169de7b17527886999 862 Pfam PF01068 ATP dependent DNA ligase domain 236 415 1.1E-27 T 23-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 LT40_RS12295 94b482fd797dca169de7b17527886999 862 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 574 816 1.3E-91 T 23-04-2016 IPR014145 DNA ligase D, polymerase domain LT40_RS12295 94b482fd797dca169de7b17527886999 862 SUPERFAMILY SSF50249 418 538 1.59E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS12295 94b482fd797dca169de7b17527886999 862 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 5 163 8.4E-72 T 23-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain LT40_RS12295 94b482fd797dca169de7b17527886999 862 Gene3D G3DSA:3.30.470.30 257 364 8.1E-30 T 23-04-2016 LT40_RS12295 94b482fd797dca169de7b17527886999 862 Pfam PF13298 DNA polymerase Ligase (LigD) 41 145 2.2E-39 T 23-04-2016 IPR014144 DNA ligase D, 3'-phosphoesterase domain LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 1.6E-240 T 23-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 SUPERFAMILY SSF48256 6 428 1.83E-165 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 PANTHER PTHR11739 36 428 2.4E-199 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 Gene3D G3DSA:1.10.230.10 281 374 2.3E-40 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 PIRSF PIRSF001369 37 429 1.1E-176 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 8.6E-133 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 Gene3D G3DSA:1.10.580.10 52 280 1.2E-99 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 PRINTS PR00143 Citrate synthase signature 219 234 3.2E-56 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 PRINTS PR00143 Citrate synthase signature 165 178 3.2E-56 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 PRINTS PR00143 Citrate synthase signature 380 394 3.2E-56 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 PRINTS PR00143 Citrate synthase signature 296 316 3.2E-56 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 PRINTS PR00143 Citrate synthase signature 241 269 3.2E-56 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS12605 2c2aa8923763d5de14e1b42b0a2a8902 429 PRINTS PR00143 Citrate synthase signature 360 376 3.2E-56 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 LT40_RS06055 d1694ef878ea594f3caf44b9e6d297b1 93 SUPERFAMILY SSF51182 1 92 8.02E-36 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS06055 d1694ef878ea594f3caf44b9e6d297b1 93 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 93 25.764 T 23-04-2016 IPR009664 Protein of unknown function DUF1255 LT40_RS06055 d1694ef878ea594f3caf44b9e6d297b1 93 PANTHER PTHR36540:SF1 1 93 1.4E-46 T 23-04-2016 LT40_RS06055 d1694ef878ea594f3caf44b9e6d297b1 93 Gene3D G3DSA:2.60.120.10 1 92 1.4E-39 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS06055 d1694ef878ea594f3caf44b9e6d297b1 93 PANTHER PTHR36540 1 93 1.4E-46 T 23-04-2016 LT40_RS06055 d1694ef878ea594f3caf44b9e6d297b1 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 7.0E-37 T 23-04-2016 IPR009664 Protein of unknown function DUF1255 LT40_RS02485 6750f6cc8f429c28d14a7fa69a11550b 378 Gene3D G3DSA:3.40.1690.10 219 357 1.1E-60 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal LT40_RS02485 6750f6cc8f429c28d14a7fa69a11550b 378 PANTHER PTHR30531 1 362 6.6E-193 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS02485 6750f6cc8f429c28d14a7fa69a11550b 378 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 9 354 5.2E-120 T 23-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 LT40_RS02485 6750f6cc8f429c28d14a7fa69a11550b 378 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 348 8.3E-121 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS02485 6750f6cc8f429c28d14a7fa69a11550b 378 SUPERFAMILY SSF160544 246 352 2.22E-39 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal LT40_RS02485 6750f6cc8f429c28d14a7fa69a11550b 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 5.2E-36 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS02485 6750f6cc8f429c28d14a7fa69a11550b 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 5.2E-36 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS02485 6750f6cc8f429c28d14a7fa69a11550b 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 5.2E-36 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS02485 6750f6cc8f429c28d14a7fa69a11550b 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 5.2E-36 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS02485 6750f6cc8f429c28d14a7fa69a11550b 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 5.2E-36 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS02485 6750f6cc8f429c28d14a7fa69a11550b 378 PANTHER PTHR30531:SF4 1 362 6.6E-193 T 23-04-2016 LT40_RS03490 db06d4485668dbb7cdf25d6f86e21e91 404 PANTHER PTHR11601 4 404 9.2E-229 T 23-04-2016 LT40_RS03490 db06d4485668dbb7cdf25d6f86e21e91 404 PIRSF PIRSF005572 2 384 1.7E-127 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LT40_RS03490 db06d4485668dbb7cdf25d6f86e21e91 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LT40_RS03490 db06d4485668dbb7cdf25d6f86e21e91 404 Pfam PF00266 Aminotransferase class-V 5 368 1.5E-82 T 23-04-2016 IPR000192 Aminotransferase class V domain LT40_RS03490 db06d4485668dbb7cdf25d6f86e21e91 404 PANTHER PTHR11601:SF45 4 404 9.2E-229 T 23-04-2016 LT40_RS03490 db06d4485668dbb7cdf25d6f86e21e91 404 SUPERFAMILY SSF53383 5 390 2.78E-108 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS03490 db06d4485668dbb7cdf25d6f86e21e91 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 7.5E-228 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 LT40_RS03490 db06d4485668dbb7cdf25d6f86e21e91 404 Gene3D G3DSA:3.90.1150.10 254 374 1.0E-49 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS03490 db06d4485668dbb7cdf25d6f86e21e91 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 52.233 T 23-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 LT40_RS03490 db06d4485668dbb7cdf25d6f86e21e91 404 Gene3D G3DSA:3.40.640.10 17 253 2.5E-91 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS15210 02be3acf2754db657d1620cd81abcba6 427 SUPERFAMILY SSF51905 25 253 1.89E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15210 02be3acf2754db657d1620cd81abcba6 427 SUPERFAMILY SSF51905 346 391 1.89E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15210 02be3acf2754db657d1620cd81abcba6 427 Pfam PF01266 FAD dependent oxidoreductase 27 383 2.2E-49 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS15210 02be3acf2754db657d1620cd81abcba6 427 Gene3D G3DSA:3.50.50.60 17 116 6.5E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15210 02be3acf2754db657d1620cd81abcba6 427 Gene3D G3DSA:3.50.50.60 346 390 6.5E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15210 02be3acf2754db657d1620cd81abcba6 427 Gene3D G3DSA:3.50.50.60 172 254 6.5E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15210 02be3acf2754db657d1620cd81abcba6 427 PANTHER PTHR13847:SF196 1 419 2.9E-95 T 23-04-2016 LT40_RS15210 02be3acf2754db657d1620cd81abcba6 427 PANTHER PTHR13847 1 419 2.9E-95 T 23-04-2016 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 Gene3D G3DSA:3.30.390.50 371 472 1.1E-37 T 23-04-2016 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 SUPERFAMILY SSF55447 368 472 7.33E-35 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 PANTHER PTHR11908 1 471 3.8E-135 T 23-04-2016 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 SMART SM01092 370 471 1.7E-35 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 18 75 5.1E-4 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 SUPERFAMILY SSF56176 185 362 1.78E-51 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 370 470 8.8E-33 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 SUPERFAMILY SSF47741 96 169 2.09E-32 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 PIRSF PIRSF036557 1 484 6.5E-206 T 23-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 Pfam PF01799 [2Fe-2S] binding domain 86 157 2.4E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 Gene3D G3DSA:3.30.43.10 201 248 1.3E-21 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 Gene3D G3DSA:1.10.150.120 86 166 2.7E-36 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 Gene3D G3DSA:3.10.20.30 2 83 1.4E-23 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 470 9.2E-207 T 23-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 SUPERFAMILY SSF54292 2 89 6.82E-17 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 199 362 4.1E-50 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 LT40_RS08975 407571a30f21a80cb23bb750fb88cc35 484 Gene3D G3DSA:3.30.465.10 249 362 8.8E-36 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 Gene3D G3DSA:3.30.365.10 179 280 1.5E-35 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 SMART SM01008 32 138 1.1E-20 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 164 672 2.6E-117 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 PANTHER PTHR11908:SF71 1 736 0.0 T 23-04-2016 LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 SUPERFAMILY SSF54665 10 145 2.22E-26 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 Gene3D G3DSA:3.30.365.10 163 178 3.0E-6 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 Gene3D G3DSA:3.30.365.10 285 312 3.0E-6 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 PANTHER PTHR11908 1 736 0.0 T 23-04-2016 LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 SUPERFAMILY SSF56003 158 732 2.22E-159 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 Gene3D G3DSA:3.90.1170.50 5 134 8.9E-26 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 Gene3D G3DSA:3.30.365.10 445 576 3.3E-26 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 Gene3D G3DSA:3.30.365.10 357 444 1.7E-55 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 Gene3D G3DSA:3.30.365.10 586 731 1.7E-55 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS07915 c9f1ab160997ddb3e89521a90bc3216f 736 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 34 137 1.9E-16 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS11190 61e1efebc45bb9356ed1355d55c44815 233 Gene3D G3DSA:1.20.120.530 78 220 1.6E-32 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS11190 61e1efebc45bb9356ed1355d55c44815 233 SUPERFAMILY SSF46785 9 103 5.92E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11190 61e1efebc45bb9356ed1355d55c44815 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.1E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS11190 61e1efebc45bb9356ed1355d55c44815 233 SMART SM00345 16 74 3.3E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS11190 61e1efebc45bb9356ed1355d55c44815 233 PANTHER PTHR11751:SF426 13 100 4.5E-58 T 23-04-2016 LT40_RS11190 61e1efebc45bb9356ed1355d55c44815 233 PANTHER PTHR11751 13 100 4.5E-58 T 23-04-2016 LT40_RS11190 61e1efebc45bb9356ed1355d55c44815 233 Gene3D G3DSA:1.10.10.10 6 74 3.3E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11190 61e1efebc45bb9356ed1355d55c44815 233 SMART SM00895 84 211 2.7E-26 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS11190 61e1efebc45bb9356ed1355d55c44815 233 Pfam PF07729 FCD domain 84 210 1.2E-29 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS11190 61e1efebc45bb9356ed1355d55c44815 233 SUPERFAMILY SSF48008 81 218 6.02E-28 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS16770 7b4c40c756fd9eb9199c3b59bff220d6 248 Gene3D G3DSA:3.40.50.2300 1 120 9.0E-34 T 23-04-2016 LT40_RS16770 7b4c40c756fd9eb9199c3b59bff220d6 248 PANTHER PTHR26402 1 121 9.4E-42 T 23-04-2016 LT40_RS16770 7b4c40c756fd9eb9199c3b59bff220d6 248 SMART SM00448 1 113 6.4E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS16770 7b4c40c756fd9eb9199c3b59bff220d6 248 SMART SM00850 148 246 4.8E-26 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 LT40_RS16770 7b4c40c756fd9eb9199c3b59bff220d6 248 SUPERFAMILY SSF52172 1 123 5.69E-34 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS16770 7b4c40c756fd9eb9199c3b59bff220d6 248 Pfam PF04397 LytTr DNA-binding domain 149 245 3.1E-22 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 LT40_RS16770 7b4c40c756fd9eb9199c3b59bff220d6 248 PANTHER PTHR26402:SF579 1 121 9.4E-42 T 23-04-2016 LT40_RS16770 7b4c40c756fd9eb9199c3b59bff220d6 248 Gene3D G3DSA:2.40.50.40 141 204 1.4E-11 T 23-04-2016 LT40_RS16770 7b4c40c756fd9eb9199c3b59bff220d6 248 Pfam PF00072 Response regulator receiver domain 3 113 4.6E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS14430 1186980cf8ffdf82a2d96fe5b25570c5 665 SUPERFAMILY SSF58104 361 662 2.35E-62 T 23-04-2016 LT40_RS14430 1186980cf8ffdf82a2d96fe5b25570c5 665 Gene3D G3DSA:1.10.287.950 420 635 3.8E-50 T 23-04-2016 LT40_RS14430 1186980cf8ffdf82a2d96fe5b25570c5 665 PANTHER PTHR32089 175 659 9.3E-89 T 23-04-2016 LT40_RS14430 1186980cf8ffdf82a2d96fe5b25570c5 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 477 659 1.9E-34 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS14430 1186980cf8ffdf82a2d96fe5b25570c5 665 SMART SM00283 405 664 6.8E-48 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS14430 1186980cf8ffdf82a2d96fe5b25570c5 665 Gene3D G3DSA:3.30.450.20 165 312 3.2E-11 T 23-04-2016 LT40_RS14430 1186980cf8ffdf82a2d96fe5b25570c5 665 Pfam PF02743 Cache domain 40 297 7.5E-19 T 23-04-2016 IPR033479 Double Cache domain 1 LT40_RS04150 e29c8375833e2fdb8a9e0bcaf8bd6dc1 163 PANTHER PTHR35335:SF1 1 160 2.9E-33 T 23-04-2016 LT40_RS04150 e29c8375833e2fdb8a9e0bcaf8bd6dc1 163 Pfam PF04186 FxsA cytoplasmic membrane protein 6 112 2.9E-33 T 23-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 LT40_RS04150 e29c8375833e2fdb8a9e0bcaf8bd6dc1 163 PANTHER PTHR35335 1 160 2.9E-33 T 23-04-2016 LT40_RS12545 52fb8b0f5ae7036a67afbd561de76dd3 108 Pfam PF03869 Arc-like DNA binding domain 11 59 1.3E-26 T 23-04-2016 IPR005569 Arc-like DNA binding domain GO:0003677 LT40_RS12545 52fb8b0f5ae7036a67afbd561de76dd3 108 Gene3D G3DSA:1.10.1220.10 11 67 4.9E-22 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 LT40_RS12545 52fb8b0f5ae7036a67afbd561de76dd3 108 SUPERFAMILY SSF47598 12 58 1.91E-14 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LT40_RS02300 64b3292fd7286fbe208651f6480036c0 147 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 147 1.4E-49 T 23-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 LT40_RS02300 64b3292fd7286fbe208651f6480036c0 147 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site LT40_RS02300 64b3292fd7286fbe208651f6480036c0 147 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 99 145 1.2E-13 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LT40_RS02300 64b3292fd7286fbe208651f6480036c0 147 PANTHER PTHR30435:SF2 1 147 1.2E-66 T 23-04-2016 LT40_RS02300 64b3292fd7286fbe208651f6480036c0 147 Pfam PF00460 Flagella basal body rod protein 7 34 1.0E-8 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LT40_RS02300 64b3292fd7286fbe208651f6480036c0 147 PANTHER PTHR30435 1 147 1.2E-66 T 23-04-2016 LT40_RS18990 26b323a709d677357814cd018ffc21f9 275 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 275 122.18 T 23-04-2016 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 LT40_RS18990 26b323a709d677357814cd018ffc21f9 275 PANTHER PTHR18901 3 272 4.4E-100 T 23-04-2016 LT40_RS18990 26b323a709d677357814cd018ffc21f9 275 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 70 206 2.8E-11 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS18990 26b323a709d677357814cd018ffc21f9 275 PANTHER PTHR18901:SF45 3 272 4.4E-100 T 23-04-2016 LT40_RS18990 26b323a709d677357814cd018ffc21f9 275 Gene3D G3DSA:1.10.150.240 28 102 9.7E-33 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LT40_RS18990 26b323a709d677357814cd018ffc21f9 275 Gene3D G3DSA:3.40.50.1000 107 261 1.3E-31 T 23-04-2016 IPR023214 HAD-like domain LT40_RS18990 26b323a709d677357814cd018ffc21f9 275 Gene3D G3DSA:3.40.50.1000 10 27 1.3E-31 T 23-04-2016 IPR023214 HAD-like domain LT40_RS18990 26b323a709d677357814cd018ffc21f9 275 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 9 259 2.1E-104 T 23-04-2016 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 LT40_RS18990 26b323a709d677357814cd018ffc21f9 275 SUPERFAMILY SSF56784 10 262 2.27E-52 T 23-04-2016 IPR023214 HAD-like domain LT40_RS14685 1b3a71c36f9ca8581fde6d4fb499a30f 451 Gene3D G3DSA:3.30.830.10 259 442 4.0E-25 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LT40_RS14685 1b3a71c36f9ca8581fde6d4fb499a30f 451 Gene3D G3DSA:3.30.830.10 25 245 4.9E-58 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LT40_RS14685 1b3a71c36f9ca8581fde6d4fb499a30f 451 Pfam PF05193 Peptidase M16 inactive domain 196 378 1.0E-26 T 23-04-2016 IPR007863 Peptidase M16, C-terminal LT40_RS14685 1b3a71c36f9ca8581fde6d4fb499a30f 451 PANTHER PTHR11851:SF136 30 437 1.9E-101 T 23-04-2016 LT40_RS14685 1b3a71c36f9ca8581fde6d4fb499a30f 451 SUPERFAMILY SSF63411 254 448 3.35E-32 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LT40_RS14685 1b3a71c36f9ca8581fde6d4fb499a30f 451 SUPERFAMILY SSF63411 27 234 2.2E-62 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LT40_RS14685 1b3a71c36f9ca8581fde6d4fb499a30f 451 PANTHER PTHR11851 30 437 1.9E-101 T 23-04-2016 LT40_RS14685 1b3a71c36f9ca8581fde6d4fb499a30f 451 Pfam PF00675 Insulinase (Peptidase family M16) 41 168 2.7E-20 T 23-04-2016 IPR011765 Peptidase M16, N-terminal LT40_RS14075 238b3d9e74204294913242ce5bae77fd 345 PANTHER PTHR11732 13 328 4.3E-166 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS14075 238b3d9e74204294913242ce5bae77fd 345 Gene3D G3DSA:3.20.20.100 21 329 1.3E-85 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS14075 238b3d9e74204294913242ce5bae77fd 345 PANTHER PTHR11732:SF191 13 328 4.3E-166 T 23-04-2016 LT40_RS14075 238b3d9e74204294913242ce5bae77fd 345 Pfam PF00248 Aldo/keto reductase family 28 329 9.7E-69 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS14075 238b3d9e74204294913242ce5bae77fd 345 SUPERFAMILY SSF51430 13 329 1.15E-90 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 Pfam PF02954 Bacterial regulatory protein, Fis family 405 445 6.7E-15 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 Gene3D G3DSA:1.10.8.60 311 383 3.2E-24 T 23-04-2016 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 Gene3D G3DSA:3.40.50.2300 6 121 6.8E-34 T 23-04-2016 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 SUPERFAMILY SSF52172 5 181 2.42E-41 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 SUPERFAMILY SSF46689 352 448 2.96E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 PANTHER PTHR32071:SF28 4 448 8.1E-263 T 23-04-2016 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 PANTHER PTHR32071 4 448 8.1E-263 T 23-04-2016 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 SMART SM00382 158 301 1.4E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 Pfam PF00072 Response regulator receiver domain 7 116 1.4E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 SMART SM00448 5 116 6.7E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 Gene3D G3DSA:3.40.50.300 136 310 1.9E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 448 9.0E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 411 428 9.0E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 Gene3D G3DSA:1.10.10.60 400 444 6.7E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 SUPERFAMILY SSF52540 139 380 2.13E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19510 d18d6a9b18f9ef64668e2addafa89cb0 448 Pfam PF00158 Sigma-54 interaction domain 139 304 1.4E-66 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS07340 1d097cde3adfab05af3bda633f233552 383 PANTHER PTHR10909:SF10 2 379 4.0E-166 T 23-04-2016 LT40_RS07340 1d097cde3adfab05af3bda633f233552 383 Gene3D G3DSA:1.20.140.10 222 378 1.7E-71 T 23-04-2016 LT40_RS07340 1d097cde3adfab05af3bda633f233552 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 2.8E-52 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS07340 1d097cde3adfab05af3bda633f233552 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 23-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 LT40_RS07340 1d097cde3adfab05af3bda633f233552 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 6.7E-27 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LT40_RS07340 1d097cde3adfab05af3bda633f233552 383 Gene3D G3DSA:2.40.110.10 122 221 4.1E-41 T 23-04-2016 LT40_RS07340 1d097cde3adfab05af3bda633f233552 383 SUPERFAMILY SSF56645 3 243 3.93E-83 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS07340 1d097cde3adfab05af3bda633f233552 383 PANTHER PTHR10909 2 379 4.0E-166 T 23-04-2016 LT40_RS07340 1d097cde3adfab05af3bda633f233552 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 119 2.1E-35 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS07340 1d097cde3adfab05af3bda633f233552 383 SUPERFAMILY SSF47203 228 380 2.42E-59 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS07340 1d097cde3adfab05af3bda633f233552 383 Gene3D G3DSA:1.10.540.10 3 121 8.4E-39 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS03585 9e411c9b66aa28e9e232d34dc7d9322d 273 SUPERFAMILY SSF51261 99 268 1.52E-47 T 23-04-2016 IPR011055 Duplicated hybrid motif LT40_RS03585 9e411c9b66aa28e9e232d34dc7d9322d 273 Pfam PF01551 Peptidase family M23 170 264 4.2E-28 T 23-04-2016 IPR016047 Peptidase M23 LT40_RS03585 9e411c9b66aa28e9e232d34dc7d9322d 273 Gene3D G3DSA:2.70.70.10 126 269 2.9E-43 T 23-04-2016 LT40_RS03585 9e411c9b66aa28e9e232d34dc7d9322d 273 Gene3D G3DSA:2.60.40.1590 22 115 3.0E-37 T 23-04-2016 LT40_RS03585 9e411c9b66aa28e9e232d34dc7d9322d 273 PANTHER PTHR21666 109 270 1.2E-38 T 23-04-2016 LT40_RS18985 47d56fce0c50f0e9cae104f6badd39ba 574 Gene3D G3DSA:1.10.3720.10 34 284 3.3E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18985 47d56fce0c50f0e9cae104f6badd39ba 574 Gene3D G3DSA:1.10.3720.10 308 563 2.3E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18985 47d56fce0c50f0e9cae104f6badd39ba 574 PANTHER PTHR30193 13 292 9.5E-63 T 23-04-2016 LT40_RS18985 47d56fce0c50f0e9cae104f6badd39ba 574 TIGRFAM TIGR03262 PhnU2: putative 2-aminoethylphosphonate ABC transporter, permease protein 33 569 7.8E-230 T 23-04-2016 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative LT40_RS18985 47d56fce0c50f0e9cae104f6badd39ba 574 SUPERFAMILY SSF161098 302 556 2.09E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18985 47d56fce0c50f0e9cae104f6badd39ba 574 SUPERFAMILY SSF161098 36 274 6.17E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18985 47d56fce0c50f0e9cae104f6badd39ba 574 PANTHER PTHR30193:SF3 13 292 9.5E-63 T 23-04-2016 LT40_RS18985 47d56fce0c50f0e9cae104f6badd39ba 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 284 1.6E-12 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18985 47d56fce0c50f0e9cae104f6badd39ba 574 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 392 560 2.8E-7 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 ProSitePatterns PS00761 Signal peptidases I signature 3. 221 234 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 Gene3D G3DSA:2.10.109.10 75 153 1.2E-54 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 Gene3D G3DSA:2.10.109.10 216 268 1.2E-54 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 23-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 4.2E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 4.2E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 216 235 4.2E-25 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 SUPERFAMILY SSF51306 77 271 1.6E-65 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 PANTHER PTHR12383 51 268 2.3E-92 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 Pfam PF00717 Peptidase S24-like 85 168 2.5E-23 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 PANTHER PTHR12383:SF27 51 268 2.3E-92 T 23-04-2016 LT40_RS04630 aad6e7ce69afcde913e33f18cc1e2c8e 284 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 64 266 2.2E-49 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LT40_RS04305 0f762facd37d2a01ac39c8ac9169a3c5 331 PANTHER PTHR37693:SF1 1 331 1.5E-62 T 23-04-2016 LT40_RS04305 0f762facd37d2a01ac39c8ac9169a3c5 331 PANTHER PTHR37693 1 331 1.5E-62 T 23-04-2016 LT40_RS04305 0f762facd37d2a01ac39c8ac9169a3c5 331 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 8 314 2.7E-26 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LT40_RS04305 0f762facd37d2a01ac39c8ac9169a3c5 331 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 8 309 6.6E-43 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LT40_RS16165 20986c87587cb1192ffdaee9ff2ad132 221 SUPERFAMILY SSF161098 13 207 3.53E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16165 20986c87587cb1192ffdaee9ff2ad132 221 Gene3D G3DSA:1.10.3720.10 12 216 1.3E-50 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16165 20986c87587cb1192ffdaee9ff2ad132 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 3.6E-29 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS16165 20986c87587cb1192ffdaee9ff2ad132 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 213 2.2E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16165 20986c87587cb1192ffdaee9ff2ad132 221 PANTHER PTHR30614 1 221 9.6E-87 T 23-04-2016 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 SUPERFAMILY SSF55831 1 124 4.45E-99 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 SUPERFAMILY SSF55831 151 323 4.45E-99 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 323 1.2E-58 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 Pfam PF00303 Thymidylate synthase 2 323 1.5E-85 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 PRINTS PR00108 Thymidylate synthase family signature 161 180 2.7E-29 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 PRINTS PR00108 Thymidylate synthase family signature 207 233 2.7E-29 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 PRINTS PR00108 Thymidylate synthase family signature 187 202 2.7E-29 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.7E-29 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 PRINTS PR00108 Thymidylate synthase family signature 245 262 2.7E-29 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 Hamap MF_00008 Thymidylate synthase [thyA]. 1 323 37.784 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 PANTHER PTHR11548 1 118 7.5E-86 T 23-04-2016 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 PANTHER PTHR11548 139 323 7.5E-86 T 23-04-2016 LT40_RS14785 9c4fbac9f31435121c2aa43d185ae6fa 323 Gene3D G3DSA:3.30.572.10 1 323 2.9E-98 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 LT40_RS11375 371e78bdb89c9ddffcf4aab206272660 452 PANTHER PTHR11780 20 434 6.2E-209 T 23-04-2016 LT40_RS11375 371e78bdb89c9ddffcf4aab206272660 452 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 182 197 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 LT40_RS11375 371e78bdb89c9ddffcf4aab206272660 452 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 359 370 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 LT40_RS11375 371e78bdb89c9ddffcf4aab206272660 452 SUPERFAMILY SSF140490 342 434 9.94E-29 T 23-04-2016 LT40_RS11375 371e78bdb89c9ddffcf4aab206272660 452 SUPERFAMILY SSF142019 26 253 3.92E-87 T 23-04-2016 LT40_RS11375 371e78bdb89c9ddffcf4aab206272660 452 SMART SM00928 346 391 1.1E-20 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 LT40_RS11375 371e78bdb89c9ddffcf4aab206272660 452 SUPERFAMILY SSF142984 258 341 1.96E-18 T 23-04-2016 LT40_RS11375 371e78bdb89c9ddffcf4aab206272660 452 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 349 431 4.1E-22 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 LT40_RS11375 371e78bdb89c9ddffcf4aab206272660 452 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 433 9.0E-196 T 23-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 LT40_RS11375 371e78bdb89c9ddffcf4aab206272660 452 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 234 1.6E-52 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 Pfam PF00989 PAS fold 633 681 4.5E-6 T 23-04-2016 IPR013767 PAS fold GO:0006355 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 863 973 6.3E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 SUPERFAMILY SSF55874 814 974 1.7E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 Pfam PF00512 His Kinase A (phospho-acceptor) domain 755 817 6.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 SMART SM00091 630 699 0.0056 T 23-04-2016 IPR000014 PAS domain LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 PANTHER PTHR24423 25 43 1.1E-112 T 23-04-2016 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 PANTHER PTHR24423 628 982 1.1E-112 T 23-04-2016 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 Gene3D G3DSA:3.30.565.10 806 974 4.7E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 SMART SM00388 754 820 1.8E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 Gene3D G3DSA:3.30.450.20 623 738 3.8E-9 T 23-04-2016 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 SUPERFAMILY SSF55785 621 716 5.9E-9 T 23-04-2016 IPR000014 PAS domain LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 631 746 1.8E-7 T 23-04-2016 IPR000014 PAS domain LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 Gene3D G3DSA:1.10.287.130 750 805 1.5E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 SUPERFAMILY SSF47384 749 817 1.65E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 PANTHER PTHR24423:SF497 25 43 1.1E-112 T 23-04-2016 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 PANTHER PTHR24423:SF497 628 982 1.1E-112 T 23-04-2016 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 SMART SM00387 863 975 9.4E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 PRINTS PR00344 Bacterial sensor protein C-terminal signature 900 914 5.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 PRINTS PR00344 Bacterial sensor protein C-terminal signature 918 928 5.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 PRINTS PR00344 Bacterial sensor protein C-terminal signature 931 949 5.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS12810 d3d5cc5f709245ed78e8dd2cc93a3e8f 982 PRINTS PR00344 Bacterial sensor protein C-terminal signature 959 972 5.8E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 503 3.7E-243 T 23-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 SUPERFAMILY SSF55021 327 413 2.15E-28 T 23-04-2016 LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 PANTHER PTHR10314:SF30 1 358 1.9E-205 T 23-04-2016 LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 SUPERFAMILY SSF55021 410 503 1.08E-25 T 23-04-2016 LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 Gene3D G3DSA:3.40.1020.10 385 503 2.5E-41 T 23-04-2016 LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 PANTHER PTHR10314 1 358 1.9E-205 T 23-04-2016 LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 306 1.3E-82 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 SUPERFAMILY SSF53686 9 355 2.62E-106 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 416 503 1.7E-20 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 319 409 2.6E-25 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 LT40_RS15275 6c6ad40826229341b4ab96d8a2c8093a 504 Gene3D G3DSA:3.40.50.1100 69 325 3.1E-87 T 23-04-2016 LT40_RS15600 323717f048e8128ce935d73a9440c77f 653 Pfam PF13387 Domain of unknown function (DUF4105) 274 429 2.8E-29 T 23-04-2016 IPR025178 Domain of unknown function DUF4105 LT40_RS01955 cee98d7330b00f8012135a8fd17507ad 157 PANTHER PTHR18964:SF141 14 145 1.9E-25 T 23-04-2016 LT40_RS01955 cee98d7330b00f8012135a8fd17507ad 157 Pfam PF01047 MarR family 39 96 1.0E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS01955 cee98d7330b00f8012135a8fd17507ad 157 PANTHER PTHR18964 14 145 1.9E-25 T 23-04-2016 LT40_RS01955 cee98d7330b00f8012135a8fd17507ad 157 Gene3D G3DSA:1.10.10.10 13 145 1.5E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01955 cee98d7330b00f8012135a8fd17507ad 157 SUPERFAMILY SSF46785 12 145 7.71E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01955 cee98d7330b00f8012135a8fd17507ad 157 SMART SM00347 31 131 2.1E-22 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS01955 cee98d7330b00f8012135a8fd17507ad 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.0E-16 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS01955 cee98d7330b00f8012135a8fd17507ad 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.0E-16 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS01955 cee98d7330b00f8012135a8fd17507ad 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 1.0E-16 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS01955 cee98d7330b00f8012135a8fd17507ad 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.0E-16 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS16200 332adaf60d84322ffa8babd8c10b80c4 175 Pfam PF12276 Protein of unknown function (DUF3617) 5 169 1.5E-37 T 23-04-2016 IPR022061 Protein of unknown function DUF3617 LT40_RS18230 6da5c02eb3595789d5f8c0ed51154627 487 Pfam PF01551 Peptidase family M23 349 445 2.6E-33 T 23-04-2016 IPR016047 Peptidase M23 LT40_RS18230 6da5c02eb3595789d5f8c0ed51154627 487 PANTHER PTHR21666 223 469 7.7E-80 T 23-04-2016 LT40_RS18230 6da5c02eb3595789d5f8c0ed51154627 487 SUPERFAMILY SSF51261 200 446 1.67E-73 T 23-04-2016 IPR011055 Duplicated hybrid motif LT40_RS18230 6da5c02eb3595789d5f8c0ed51154627 487 Pfam PF04225 Opacity-associated protein A LysM-like domain 125 202 5.6E-7 T 23-04-2016 IPR007340 Opacity-associated protein A LT40_RS18230 6da5c02eb3595789d5f8c0ed51154627 487 Gene3D G3DSA:2.70.70.10 300 446 6.5E-47 T 23-04-2016 LT40_RS18230 6da5c02eb3595789d5f8c0ed51154627 487 PANTHER PTHR21666:SF221 223 469 7.7E-80 T 23-04-2016 LT40_RS16340 2c338610faa8504818c31e9134238fdf 300 Gene3D G3DSA:2.70.98.10 5 295 3.1E-78 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 LT40_RS16340 2c338610faa8504818c31e9134238fdf 300 PIRSF PIRSF016020 2 298 6.8E-47 T 23-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 LT40_RS16340 2c338610faa8504818c31e9134238fdf 300 Pfam PF01263 Aldose 1-epimerase 17 290 2.0E-48 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 LT40_RS16340 2c338610faa8504818c31e9134238fdf 300 PANTHER PTHR11122:SF14 10 300 6.1E-74 T 23-04-2016 LT40_RS16340 2c338610faa8504818c31e9134238fdf 300 SUPERFAMILY SSF74650 4 290 8.16E-67 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LT40_RS16340 2c338610faa8504818c31e9134238fdf 300 PANTHER PTHR11122 10 300 6.1E-74 T 23-04-2016 LT40_RS04365 ddfe86ab698d5f3e4f3f74234c6aabff 130 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 3 124 1.1E-57 T 23-04-2016 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44|UniPathway: UPA00157 LT40_RS04365 ddfe86ab698d5f3e4f3f74234c6aabff 130 PANTHER PTHR33570 2 129 1.2E-64 T 23-04-2016 LT40_RS04365 ddfe86ab698d5f3e4f3f74234c6aabff 130 Gene3D G3DSA:1.20.1290.10 4 127 2.0E-26 T 23-04-2016 IPR029032 AhpD-like LT40_RS04365 ddfe86ab698d5f3e4f3f74234c6aabff 130 SUPERFAMILY SSF69118 4 126 1.15E-37 T 23-04-2016 IPR029032 AhpD-like LT40_RS04365 ddfe86ab698d5f3e4f3f74234c6aabff 130 PANTHER PTHR33570:SF2 2 129 1.2E-64 T 23-04-2016 LT40_RS04365 ddfe86ab698d5f3e4f3f74234c6aabff 130 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 1.8E-23 T 23-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 PANTHER PTHR30313 3 429 3.4E-160 T 23-04-2016 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 Pfam PF08278 DNA primase DnaG DnaB-binding 522 642 7.9E-26 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 SMART SM00400 36 90 3.3E-34 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 Pfam PF13662 Toprim domain 261 327 4.8E-16 T 23-04-2016 IPR006171 Toprim domain LT40_RS18015 c0739f037b656b139c4a904b64813924 657 SUPERFAMILY SSF56731 116 427 5.36E-110 T 23-04-2016 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 TIGRFAM TIGR01391 dnaG: DNA primase 5 420 7.7E-146 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 Gene3D G3DSA:3.90.580.10 2 101 3.0E-41 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 Pfam PF10410 DnaB-helicase binding domain of primase 373 425 6.0E-9 T 23-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 SUPERFAMILY SSF117023 519 645 1.22E-31 T 23-04-2016 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 SMART SM00493 261 332 9.7E-21 T 23-04-2016 IPR006171 Toprim domain LT40_RS18015 c0739f037b656b139c4a904b64813924 657 SMART SM00766 518 643 5.5E-35 T 23-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 Pfam PF01807 CHC2 zinc finger 6 100 5.8E-40 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 Gene3D G3DSA:1.20.50.20 371 428 4.1E-22 T 23-04-2016 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 PIRSF PIRSF002811 2 652 8.6E-150 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 Gene3D G3DSA:1.10.860.10 506 644 1.3E-39 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LT40_RS18015 c0739f037b656b139c4a904b64813924 657 SUPERFAMILY SSF57783 4 101 1.87E-37 T 23-04-2016 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 Gene3D G3DSA:3.90.980.10 116 242 2.1E-46 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal LT40_RS18015 c0739f037b656b139c4a904b64813924 657 Gene3D G3DSA:3.40.1360.10 243 367 1.8E-47 T 23-04-2016 LT40_RS18015 c0739f037b656b139c4a904b64813924 657 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 254 1.9E-43 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal LT40_RS18015 c0739f037b656b139c4a904b64813924 657 Hamap MF_00974 DNA primase [dnaG]. 4 644 30.214 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 PANTHER PTHR24220 299 314 3.6E-139 T 23-04-2016 LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 PANTHER PTHR24220 11 277 3.6E-139 T 23-04-2016 LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 SMART SM00382 34 225 1.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 SUPERFAMILY SSF50331 257 355 5.39E-7 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 40 357 1.6E-107 T 23-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 Pfam PF00005 ABC transporter 25 167 4.2E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 Pfam PF08402 TOBE domain 277 356 2.4E-11 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 SUPERFAMILY SSF52540 10 246 9.52E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 Gene3D G3DSA:3.40.50.300 10 240 8.6E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 PANTHER PTHR24220:SF402 299 314 3.6E-139 T 23-04-2016 LT40_RS15185 e462e358fda9e37c7890a5286a6c3a35 362 PANTHER PTHR24220:SF402 11 277 3.6E-139 T 23-04-2016 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 Gene3D G3DSA:3.40.50.1370 2 140 5.1E-52 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 299 2.1E-114 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 144 8.9E-46 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 PANTHER PTHR11405:SF1 1 298 7.8E-141 T 23-04-2016 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 120 134 1.3E-27 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 1.3E-27 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 278 289 1.3E-27 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 216 226 1.3E-27 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 80 93 1.3E-27 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 297 3.1E-51 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 287 8.0E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 252 261 8.0E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 8.0E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 131 142 8.0E-27 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 Gene3D G3DSA:3.40.50.1370 141 286 1.1E-58 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 3 300 79.357 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 SUPERFAMILY SSF53671 3 299 5.95E-104 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LT40_RS05320 aaf2ba6dbcd4850fa89b4587eb21492d 306 PANTHER PTHR11405 1 298 7.8E-141 T 23-04-2016 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 895 29.277 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 638 1.9E-292 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 507 4.3E-152 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Gene3D G3DSA:2.120.10.90 533 655 4.0E-127 T 23-04-2016 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Gene3D G3DSA:2.120.10.90 693 887 4.0E-127 T 23-04-2016 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Gene3D G3DSA:1.10.268.10 364 498 3.3E-48 T 23-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 SUPERFAMILY SSF56719 30 522 2.22E-183 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 PANTHER PTHR10169:SF48 690 857 0.0 T 23-04-2016 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 PANTHER PTHR10169:SF48 451 642 0.0 T 23-04-2016 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 PANTHER PTHR10169:SF48 3 418 0.0 T 23-04-2016 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 835 5.1E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 741 785 3.9E-12 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 693 736 1.2E-8 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 541 586 6.4E-9 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 841 887 1.2E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 591 638 6.0E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 SUPERFAMILY SSF101904 687 899 9.42E-98 T 23-04-2016 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 SUPERFAMILY SSF101904 534 639 9.42E-98 T 23-04-2016 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 SMART SM00434 11 500 5.4E-295 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Gene3D G3DSA:3.90.199.10 34 216 2.7E-83 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 PANTHER PTHR10169 690 857 0.0 T 23-04-2016 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 PANTHER PTHR10169 451 642 0.0 T 23-04-2016 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 PANTHER PTHR10169 3 418 0.0 T 23-04-2016 LT40_RS06140 8e01936bab320c86456c7807acfb107b 934 Gene3D G3DSA:3.30.1360.40 236 334 8.4E-39 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain LT40_RS15095 ab5d1966cc605b7fcd64d6f39a14d18d 373 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 87 356 8.2E-61 T 23-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region LT40_RS15095 ab5d1966cc605b7fcd64d6f39a14d18d 373 PANTHER PTHR10907 54 369 1.7E-97 T 23-04-2016 LT40_RS15095 ab5d1966cc605b7fcd64d6f39a14d18d 373 Gene3D G3DSA:2.120.10.30 71 369 5.3E-71 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS15095 ab5d1966cc605b7fcd64d6f39a14d18d 373 PANTHER PTHR10907:SF47 54 369 1.7E-97 T 23-04-2016 LT40_RS15095 ab5d1966cc605b7fcd64d6f39a14d18d 373 SUPERFAMILY SSF63829 54 369 1.8E-67 T 23-04-2016 LT40_RS11410 acf34ee44a94e1012d7fd609ae82f61f 510 PANTHER PTHR22773 1 498 2.3E-184 T 23-04-2016 LT40_RS11410 acf34ee44a94e1012d7fd609ae82f61f 510 PANTHER PTHR22773:SF40 1 498 2.3E-184 T 23-04-2016 LT40_RS11410 acf34ee44a94e1012d7fd609ae82f61f 510 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 497 6.2E-174 T 23-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 LT40_RS11410 acf34ee44a94e1012d7fd609ae82f61f 510 Pfam PF00361 Proton-conducting membrane transporter 134 433 1.8E-70 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 LT40_RS11410 acf34ee44a94e1012d7fd609ae82f61f 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 3.0E-37 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 LT40_RS11410 acf34ee44a94e1012d7fd609ae82f61f 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 391 417 3.0E-37 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 LT40_RS11410 acf34ee44a94e1012d7fd609ae82f61f 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 251 275 3.0E-37 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 LT40_RS11410 acf34ee44a94e1012d7fd609ae82f61f 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 339 358 3.0E-37 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 LT40_RS11410 acf34ee44a94e1012d7fd609ae82f61f 510 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 176 200 3.0E-37 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 LT40_RS09655 3122118fc6483fe2c81a66045d9a647a 457 Pfam PF14793 Domain of unknown function (DUF4478) 10 116 9.1E-43 T 23-04-2016 IPR027820 Domain of unknown function DUF4478 LT40_RS09655 3122118fc6483fe2c81a66045d9a647a 457 Gene3D G3DSA:3.30.1850.10 7 119 1.1E-48 T 23-04-2016 IPR027820 Domain of unknown function DUF4478 LT40_RS09655 3122118fc6483fe2c81a66045d9a647a 457 Pfam PF11892 Domain of unknown function (DUF3412) 336 456 1.1E-54 T 23-04-2016 IPR021826 Protein of unknown function DUF3412 LT40_RS09655 3122118fc6483fe2c81a66045d9a647a 457 SUPERFAMILY SSF102405 122 331 2.29E-41 T 23-04-2016 LT40_RS09655 3122118fc6483fe2c81a66045d9a647a 457 PANTHER PTHR31223 89 344 3.4E-167 T 23-04-2016 LT40_RS09655 3122118fc6483fe2c81a66045d9a647a 457 PANTHER PTHR31223 361 386 3.4E-167 T 23-04-2016 LT40_RS09655 3122118fc6483fe2c81a66045d9a647a 457 Pfam PF03641 Possible lysine decarboxylase 192 331 1.6E-31 T 23-04-2016 IPR031100 LOG family LT40_RS09655 3122118fc6483fe2c81a66045d9a647a 457 PANTHER PTHR31223:SF12 89 344 3.4E-167 T 23-04-2016 LT40_RS09655 3122118fc6483fe2c81a66045d9a647a 457 PANTHER PTHR31223:SF12 361 386 3.4E-167 T 23-04-2016 LT40_RS09655 3122118fc6483fe2c81a66045d9a647a 457 Gene3D G3DSA:3.40.50.450 127 455 1.8E-118 T 23-04-2016 LT40_RS14225 78d391a2e4dd4c6b6dd3bd5d138779a2 219 Gene3D G3DSA:3.30.70.60 103 205 3.8E-38 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 LT40_RS14225 78d391a2e4dd4c6b6dd3bd5d138779a2 219 Pfam PF04350 Pilus assembly protein, PilO 58 203 7.2E-57 T 23-04-2016 IPR007445 Pilus assembly protein, PilO LT40_RS14225 78d391a2e4dd4c6b6dd3bd5d138779a2 219 PIRSF PIRSF016482 5 215 4.7E-83 T 23-04-2016 IPR007445 Pilus assembly protein, PilO LT40_RS14225 78d391a2e4dd4c6b6dd3bd5d138779a2 219 PANTHER PTHR39555:SF1 9 215 9.0E-59 T 23-04-2016 LT40_RS14225 78d391a2e4dd4c6b6dd3bd5d138779a2 219 Gene3D G3DSA:1.10.287.540 67 102 5.5E-19 T 23-04-2016 IPR023218 UPF0291 structural domain LT40_RS14225 78d391a2e4dd4c6b6dd3bd5d138779a2 219 PANTHER PTHR39555 9 215 9.0E-59 T 23-04-2016 LT40_RS10705 567d99c1b1289e6246b6fcca57d2b6b5 640 SUPERFAMILY SSF56784 278 395 2.32E-9 T 23-04-2016 IPR023214 HAD-like domain LT40_RS10705 567d99c1b1289e6246b6fcca57d2b6b5 640 TIGRFAM TIGR01686 FkbH: FkbH domain 278 607 1.1E-86 T 23-04-2016 IPR010037 FkbH domain LT40_RS10705 567d99c1b1289e6246b6fcca57d2b6b5 640 Gene3D G3DSA:3.40.50.1000 279 397 2.3E-9 T 23-04-2016 IPR023214 HAD-like domain LT40_RS10705 567d99c1b1289e6246b6fcca57d2b6b5 640 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 279 400 3.1E-16 T 23-04-2016 IPR010033 HAD-superfamily phosphatase, subfamily IIIC LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 Gene3D G3DSA:3.30.450.20 210 278 5.9E-4 T 23-04-2016 LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 PANTHER PTHR32071:SF5 294 595 4.0E-121 T 23-04-2016 LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 379 394 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 SUPERFAMILY SSF46689 503 593 1.08E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 316 329 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 Gene3D G3DSA:3.40.50.300 294 464 1.3E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 Pfam PF02954 Bacterial regulatory protein, Fis family 565 593 1.2E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 SMART SM00382 312 456 5.4E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 Gene3D G3DSA:1.10.8.60 480 535 2.1E-14 T 23-04-2016 LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 560 577 1.5E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 577 597 1.5E-5 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 Pfam PF00158 Sigma-54 interaction domain 294 459 3.4E-61 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 SUPERFAMILY SSF52540 294 533 4.84E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 Gene3D G3DSA:1.10.10.60 565 594 1.1E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 503 512 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS02035 f26a94795453139c2f381b2579de8d30 598 PANTHER PTHR32071 294 595 4.0E-121 T 23-04-2016 LT40_RS02135 9215025b1447c2be34d05b4c17c0f7d6 339 SUPERFAMILY SSF161098 136 322 2.49E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02135 9215025b1447c2be34d05b4c17c0f7d6 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 1.9E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02135 9215025b1447c2be34d05b4c17c0f7d6 339 PANTHER PTHR30325 1 339 5.2E-204 T 23-04-2016 LT40_RS02135 9215025b1447c2be34d05b4c17c0f7d6 339 Gene3D G3DSA:1.10.3720.10 132 337 3.0E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS06285 7934fbb2c9c1275b8a137f23eb6fa7cd 377 Pfam PF00149 Calcineurin-like phosphoesterase 147 313 1.6E-11 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LT40_RS06285 7934fbb2c9c1275b8a137f23eb6fa7cd 377 SUPERFAMILY SSF56300 142 374 1.21E-36 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS06285 7934fbb2c9c1275b8a137f23eb6fa7cd 377 PANTHER PTHR31302:SF7 11 375 5.4E-62 T 23-04-2016 LT40_RS06285 7934fbb2c9c1275b8a137f23eb6fa7cd 377 Gene3D G3DSA:3.60.21.10 146 318 1.7E-22 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS06285 7934fbb2c9c1275b8a137f23eb6fa7cd 377 PANTHER PTHR31302 11 375 5.4E-62 T 23-04-2016 LT40_RS15870 82f8844110c99b2569e128bda0229bd9 141 SUPERFAMILY SSF82784 3 140 8.64E-42 T 23-04-2016 IPR003718 OsmC/Ohr family LT40_RS15870 82f8844110c99b2569e128bda0229bd9 141 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 2 137 4.4E-64 T 23-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 LT40_RS15870 82f8844110c99b2569e128bda0229bd9 141 PANTHER PTHR33797 1 141 1.5E-60 T 23-04-2016 LT40_RS15870 82f8844110c99b2569e128bda0229bd9 141 Pfam PF02566 OsmC-like protein 41 136 1.6E-21 T 23-04-2016 IPR003718 OsmC/Ohr family LT40_RS15870 82f8844110c99b2569e128bda0229bd9 141 PANTHER PTHR33797:SF1 1 141 1.5E-60 T 23-04-2016 LT40_RS15870 82f8844110c99b2569e128bda0229bd9 141 Gene3D G3DSA:3.30.300.20 2 139 3.0E-54 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta LT40_RS11520 62470bf4167928f11ad88648a5eb138e 412 PANTHER PTHR21248:SF5 1 383 4.9E-103 T 23-04-2016 LT40_RS11520 62470bf4167928f11ad88648a5eb138e 412 PANTHER PTHR21248 1 383 4.9E-103 T 23-04-2016 LT40_RS11520 62470bf4167928f11ad88648a5eb138e 412 Pfam PF13091 PLD-like domain 216 342 7.1E-24 T 23-04-2016 IPR025202 Phospholipase D-like domain LT40_RS11520 62470bf4167928f11ad88648a5eb138e 412 Pfam PF13091 PLD-like domain 26 140 3.0E-16 T 23-04-2016 IPR025202 Phospholipase D-like domain LT40_RS11520 62470bf4167928f11ad88648a5eb138e 412 Gene3D G3DSA:3.30.870.10 208 344 3.1E-31 T 23-04-2016 LT40_RS11520 62470bf4167928f11ad88648a5eb138e 412 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 386 51.512 T 23-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 LT40_RS11520 62470bf4167928f11ad88648a5eb138e 412 Gene3D G3DSA:3.30.870.10 4 188 5.1E-45 T 23-04-2016 LT40_RS11520 62470bf4167928f11ad88648a5eb138e 412 SUPERFAMILY SSF56024 5 183 2.88E-40 T 23-04-2016 LT40_RS11520 62470bf4167928f11ad88648a5eb138e 412 SUPERFAMILY SSF56024 195 362 6.95E-39 T 23-04-2016 LT40_RS11520 62470bf4167928f11ad88648a5eb138e 412 SMART SM00155 288 315 6.0 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LT40_RS11520 62470bf4167928f11ad88648a5eb138e 412 SMART SM00155 108 135 2.0E-5 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 529 643 8.2E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 SMART SM00388 417 482 2.8E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 SMART SM00387 529 645 7.6E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 Gene3D G3DSA:3.40.50.2300 667 787 2.1E-26 T 23-04-2016 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 Gene3D G3DSA:1.10.287.130 411 476 5.1E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 Pfam PF00072 Response regulator receiver domain 673 783 9.1E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 642 1.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 598 1.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 1.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 623 1.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 SUPERFAMILY SSF55874 471 641 8.51E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 PANTHER PTHR24423 35 50 6.8E-122 T 23-04-2016 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 PANTHER PTHR24423 396 790 6.8E-122 T 23-04-2016 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 Pfam PF07695 7TM diverse intracellular signalling 183 385 1.3E-55 T 23-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 PANTHER PTHR24423:SF559 35 50 6.8E-122 T 23-04-2016 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 PANTHER PTHR24423:SF559 396 790 6.8E-122 T 23-04-2016 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 Pfam PF00512 His Kinase A (phospho-acceptor) domain 418 482 1.4E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 SUPERFAMILY SSF47384 404 483 6.47E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 SMART SM00448 670 783 3.6E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 SUPERFAMILY SSF52172 670 787 1.71E-25 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 Gene3D G3DSA:3.30.565.10 486 643 8.3E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS18930 9c3347a7a03bbb99704b3f4d7b3a0ff2 808 Pfam PF07696 7TMR-DISM extracellular 2 32 170 2.4E-35 T 23-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 LT40_RS01465 7e8529a8fbd97f3e4e40a3ed591af5cb 191 PANTHER PTHR11260 1 98 1.5E-24 T 23-04-2016 LT40_RS01465 7e8529a8fbd97f3e4e40a3ed591af5cb 191 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 66 1.2E-8 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LT40_RS01465 7e8529a8fbd97f3e4e40a3ed591af5cb 191 PANTHER PTHR11260:SF322 1 98 1.5E-24 T 23-04-2016 LT40_RS01465 7e8529a8fbd97f3e4e40a3ed591af5cb 191 Gene3D G3DSA:1.20.1050.10 85 187 1.7E-40 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS01465 7e8529a8fbd97f3e4e40a3ed591af5cb 191 SUPERFAMILY SSF47616 70 186 6.54E-14 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS01465 7e8529a8fbd97f3e4e40a3ed591af5cb 191 Pfam PF14834 Glutathione S-transferase, C-terminal domain 74 186 8.2E-46 T 23-04-2016 LT40_RS01465 7e8529a8fbd97f3e4e40a3ed591af5cb 191 Gene3D G3DSA:3.40.30.10 3 84 3.1E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS01465 7e8529a8fbd97f3e4e40a3ed591af5cb 191 SUPERFAMILY SSF52833 2 71 4.49E-14 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 SUPERFAMILY SSF55785 153 258 1.62E-20 T 23-04-2016 IPR000014 PAS domain LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 286 429 6.5E-37 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 SMART SM00283 246 433 3.5E-14 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 36 137 2.9E-10 T 23-04-2016 IPR000014 PAS domain LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 263 2.4E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 SMART SM00091 140 210 3.9 T 23-04-2016 IPR000014 PAS domain LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 SMART SM00091 18 87 6.9 T 23-04-2016 IPR000014 PAS domain LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 Pfam PF13426 PAS domain 36 134 1.4E-12 T 23-04-2016 IPR000014 PAS domain LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 Gene3D G3DSA:1.10.287.950 253 431 6.8E-45 T 23-04-2016 LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 SUPERFAMILY SSF55785 34 134 3.84E-18 T 23-04-2016 IPR000014 PAS domain LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 SUPERFAMILY SSF58104 238 432 4.45E-50 T 23-04-2016 LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 SMART SM00086 93 135 5.4E-6 T 23-04-2016 IPR001610 PAC motif LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 SMART SM00086 215 257 0.92 T 23-04-2016 IPR001610 PAC motif LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 Gene3D G3DSA:3.30.450.20 35 134 5.9E-18 T 23-04-2016 LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 Gene3D G3DSA:3.30.450.20 153 252 1.9E-19 T 23-04-2016 LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 PANTHER PTHR24422 1 434 2.0E-114 T 23-04-2016 LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 PANTHER PTHR24422:SF10 1 434 2.0E-114 T 23-04-2016 LT40_RS06745 bf448bd9655bda3527f2ae8ee483b91b 435 Pfam PF08447 PAS fold 165 250 1.7E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 PANTHER PTHR24423:SF438 25 286 3.9E-176 T 23-04-2016 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 PANTHER PTHR24423:SF438 307 681 3.9E-176 T 23-04-2016 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SMART SM00091 25 96 3.2 T 23-04-2016 IPR000014 PAS domain LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SMART SM00091 156 222 0.0039 T 23-04-2016 IPR000014 PAS domain LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SMART SM00387 420 542 1.2E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 520 4.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 485 4.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 499 4.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 539 4.0E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SUPERFAMILY SSF55874 370 541 5.76E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SUPERFAMILY SSF55785 37 145 3.49E-17 T 23-04-2016 IPR000014 PAS domain LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SMART SM00448 564 677 1.0E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 Gene3D G3DSA:3.30.450.20 22 142 5.7E-21 T 23-04-2016 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 Gene3D G3DSA:3.30.450.20 147 269 2.5E-17 T 23-04-2016 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 Pfam PF08447 PAS fold 50 137 7.9E-17 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SUPERFAMILY SSF47384 304 376 5.49E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 540 1.4E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 Pfam PF00072 Response regulator receiver domain 566 677 8.4E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 Gene3D G3DSA:3.30.565.10 366 542 2.1E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 Pfam PF00512 His Kinase A (phospho-acceptor) domain 312 377 1.1E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 PANTHER PTHR24423 25 286 3.9E-176 T 23-04-2016 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 PANTHER PTHR24423 307 681 3.9E-176 T 23-04-2016 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SMART SM00388 311 379 2.0E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SMART SM00086 102 144 5.6E-6 T 23-04-2016 IPR001610 PAC motif LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SMART SM00086 229 271 9.2 T 23-04-2016 IPR001610 PAC motif LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 Pfam PF08448 PAS fold 164 272 6.2E-23 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 Gene3D G3DSA:3.40.50.2300 563 683 8.6E-31 T 23-04-2016 LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SUPERFAMILY SSF52172 563 682 1.17E-24 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 SUPERFAMILY SSF55785 140 263 1.06E-18 T 23-04-2016 IPR000014 PAS domain LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 36 150 8.5E-6 T 23-04-2016 IPR000014 PAS domain LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 157 277 2.3E-10 T 23-04-2016 IPR000014 PAS domain LT40_RS06770 f35b754b3b51965efe27a0015ef99822 686 Gene3D G3DSA:1.10.287.130 305 365 2.2E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS17000 9b059f691a7af3a8fdbac9f48a0f78b2 321 Pfam PF09084 NMT1/THI5 like 55 249 2.2E-19 T 23-04-2016 IPR015168 SsuA/THI5-like LT40_RS17000 9b059f691a7af3a8fdbac9f48a0f78b2 321 Gene3D G3DSA:3.40.190.10 113 234 4.2E-33 T 23-04-2016 LT40_RS17000 9b059f691a7af3a8fdbac9f48a0f78b2 321 PANTHER PTHR30024:SF11 1 314 9.0E-141 T 23-04-2016 LT40_RS17000 9b059f691a7af3a8fdbac9f48a0f78b2 321 SUPERFAMILY SSF53850 29 255 3.26E-56 T 23-04-2016 LT40_RS17000 9b059f691a7af3a8fdbac9f48a0f78b2 321 SMART SM00062 30 250 5.9E-33 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS17000 9b059f691a7af3a8fdbac9f48a0f78b2 321 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 31 312 4.1E-77 T 23-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 LT40_RS17000 9b059f691a7af3a8fdbac9f48a0f78b2 321 PANTHER PTHR30024 1 314 9.0E-141 T 23-04-2016 LT40_RS12550 8fa1e14bb939a26cdbe3703cebd42b14 437 PANTHER PTHR30588:SF0 1 437 2.4E-206 T 23-04-2016 LT40_RS12550 8fa1e14bb939a26cdbe3703cebd42b14 437 Pfam PF05525 Branched-chain amino acid transport protein 7 427 6.3E-151 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LT40_RS12550 8fa1e14bb939a26cdbe3703cebd42b14 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 13 414 5.9E-151 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LT40_RS12550 8fa1e14bb939a26cdbe3703cebd42b14 437 PANTHER PTHR30588 1 437 2.4E-206 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LT40_RS00835 9d448482601f42a70b55428859162334 325 Pfam PF00691 OmpA family 153 231 4.3E-13 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS00835 9d448482601f42a70b55428859162334 325 PANTHER PTHR30128 31 243 5.2E-33 T 23-04-2016 LT40_RS00835 9d448482601f42a70b55428859162334 325 PANTHER PTHR30128:SF11 31 243 5.2E-33 T 23-04-2016 LT40_RS00835 9d448482601f42a70b55428859162334 325 Gene3D G3DSA:3.30.1330.60 115 237 1.8E-23 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS00835 9d448482601f42a70b55428859162334 325 SUPERFAMILY SSF103088 126 239 5.76E-25 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS00835 9d448482601f42a70b55428859162334 325 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 200 219 6.28E-5 T 23-04-2016 LT40_RS00835 9d448482601f42a70b55428859162334 325 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 182 199 6.28E-5 T 23-04-2016 LT40_RS00835 9d448482601f42a70b55428859162334 325 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 220 240 6.28E-5 T 23-04-2016 LT40_RS00460 925701006345e8197b153b7950ab5698 351 PANTHER PTHR22572 100 296 4.9E-50 T 23-04-2016 LT40_RS00460 925701006345e8197b153b7950ab5698 351 PANTHER PTHR22572:SF117 100 296 4.9E-50 T 23-04-2016 LT40_RS00460 925701006345e8197b153b7950ab5698 351 Gene3D G3DSA:2.160.10.10 100 140 7.6E-10 T 23-04-2016 LT40_RS00460 925701006345e8197b153b7950ab5698 351 Gene3D G3DSA:2.160.10.10 141 309 6.6E-39 T 23-04-2016 LT40_RS00460 925701006345e8197b153b7950ab5698 351 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 107 135 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LT40_RS00460 925701006345e8197b153b7950ab5698 351 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 9 330 6.2E-114 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 LT40_RS00460 925701006345e8197b153b7950ab5698 351 SUPERFAMILY SSF51161 33 318 2.8E-79 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS00460 925701006345e8197b153b7950ab5698 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 181 5.6E-7 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS00460 925701006345e8197b153b7950ab5698 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 259 293 0.0022 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS00460 925701006345e8197b153b7950ab5698 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 223 258 6.6E-7 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS00460 925701006345e8197b153b7950ab5698 351 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 10 327 36.094 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 LT40_RS00460 925701006345e8197b153b7950ab5698 351 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 26 90 4.1E-22 T 23-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 5.4E-14 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 5.4E-14 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 5.4E-14 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 Gene3D G3DSA:3.40.50.1820 11 297 1.5E-74 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 5.6E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 5.6E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 5.6E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 PANTHER PTHR10992:SF860 210 311 2.8E-122 T 23-04-2016 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 PANTHER PTHR10992:SF860 1 174 2.8E-122 T 23-04-2016 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 311 1.1E-131 T 23-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 Pfam PF00561 alpha/beta hydrolase fold 36 296 2.0E-37 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 SUPERFAMILY SSF53474 2 296 1.71E-65 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 PIRSF PIRSF006431 1 315 3.8E-137 T 23-04-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 PANTHER PTHR10992 210 311 2.8E-122 T 23-04-2016 LT40_RS14380 6a438895bb1c61f427d5db86e174add5 323 PANTHER PTHR10992 1 174 2.8E-122 T 23-04-2016 LT40_RS13690 5333d6a1765d5964beca35607c94d4c0 401 PIRSF PIRSF000484 1 389 6.8E-62 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LT40_RS13690 5333d6a1765d5964beca35607c94d4c0 401 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 7 399 49.252 T 23-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LT40_RS13690 5333d6a1765d5964beca35607c94d4c0 401 Gene3D G3DSA:3.20.140.10 7 400 1.2E-139 T 23-04-2016 LT40_RS13690 5333d6a1765d5964beca35607c94d4c0 401 PANTHER PTHR11098 1 400 8.0E-199 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LT40_RS13690 5333d6a1765d5964beca35607c94d4c0 401 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 10 398 2.0E-148 T 23-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LT40_RS13690 5333d6a1765d5964beca35607c94d4c0 401 SUPERFAMILY SSF54675 4 140 1.96E-41 T 23-04-2016 LT40_RS13690 5333d6a1765d5964beca35607c94d4c0 401 SUPERFAMILY SSF51690 122 397 5.89E-88 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 LT40_RS13690 5333d6a1765d5964beca35607c94d4c0 401 PANTHER PTHR11098:SF16 1 400 8.0E-199 T 23-04-2016 LT40_RS13690 5333d6a1765d5964beca35607c94d4c0 401 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 399 2.8E-83 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 LT40_RS12680 6c2cc6036c088c241ea1cf041e73b709 222 Gene3D G3DSA:3.40.50.2300 1 124 2.1E-34 T 23-04-2016 LT40_RS12680 6c2cc6036c088c241ea1cf041e73b709 222 PANTHER PTHR26402 1 217 1.7E-119 T 23-04-2016 LT40_RS12680 6c2cc6036c088c241ea1cf041e73b709 222 Gene3D G3DSA:1.10.10.10 126 218 2.6E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12680 6c2cc6036c088c241ea1cf041e73b709 222 SMART SM00862 146 217 2.4E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS12680 6c2cc6036c088c241ea1cf041e73b709 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 217 3.6E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS12680 6c2cc6036c088c241ea1cf041e73b709 222 SUPERFAMILY SSF46894 126 217 1.56E-23 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS12680 6c2cc6036c088c241ea1cf041e73b709 222 SMART SM00448 1 112 3.2E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS12680 6c2cc6036c088c241ea1cf041e73b709 222 SUPERFAMILY SSF52172 1 118 1.71E-36 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS12680 6c2cc6036c088c241ea1cf041e73b709 222 Pfam PF00072 Response regulator receiver domain 4 111 5.9E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS12680 6c2cc6036c088c241ea1cf041e73b709 222 PANTHER PTHR26402:SF279 1 217 1.7E-119 T 23-04-2016 LT40_RS10660 553d9a40859d2e1f0ec242d2d498f1b3 321 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 26 314 4.4E-92 T 23-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 LT40_RS10660 553d9a40859d2e1f0ec242d2d498f1b3 321 SUPERFAMILY SSF161098 62 308 3.4E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10660 553d9a40859d2e1f0ec242d2d498f1b3 321 Gene3D G3DSA:1.10.3720.10 32 316 9.9E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10660 553d9a40859d2e1f0ec242d2d498f1b3 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 318 8.1E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10660 553d9a40859d2e1f0ec242d2d498f1b3 321 PANTHER PTHR30425 26 321 1.7E-95 T 23-04-2016 LT40_RS10660 553d9a40859d2e1f0ec242d2d498f1b3 321 PANTHER PTHR30425:SF1 26 321 1.7E-95 T 23-04-2016 LT40_RS08295 48b5c9b03c71ce86a53ac266974b3918 601 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS08295 48b5c9b03c71ce86a53ac266974b3918 601 Gene3D G3DSA:3.40.50.300 354 583 2.2E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08295 48b5c9b03c71ce86a53ac266974b3918 601 SUPERFAMILY SSF90123 17 336 6.54E-46 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS08295 48b5c9b03c71ce86a53ac266974b3918 601 Pfam PF00664 ABC transporter transmembrane region 75 252 5.4E-19 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS08295 48b5c9b03c71ce86a53ac266974b3918 601 Gene3D G3DSA:1.20.1560.10 17 339 2.4E-41 T 23-04-2016 LT40_RS08295 48b5c9b03c71ce86a53ac266974b3918 601 PANTHER PTHR24222:SF28 16 588 5.5E-171 T 23-04-2016 LT40_RS08295 48b5c9b03c71ce86a53ac266974b3918 601 PANTHER PTHR24222 16 588 5.5E-171 T 23-04-2016 LT40_RS08295 48b5c9b03c71ce86a53ac266974b3918 601 Pfam PF00005 ABC transporter 370 518 3.9E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS08295 48b5c9b03c71ce86a53ac266974b3918 601 SUPERFAMILY SSF52540 347 586 9.52E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08295 48b5c9b03c71ce86a53ac266974b3918 601 SMART SM00382 379 564 2.3E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS05970 ff86d0fc9e0e2ed751b21a09e6719459 265 Pfam PF16234 Domain of unknown function (DUF4892) 22 196 4.4E-75 T 23-04-2016 IPR032608 Protein of unknown function DUF4892 LT40_RS03920 f3aa3101202bc222334c44df4c657aa7 332 Gene3D G3DSA:1.10.10.60 279 329 6.0E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS03920 f3aa3101202bc222334c44df4c657aa7 332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 279 321 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS03920 f3aa3101202bc222334c44df4c657aa7 332 SMART SM00342 242 325 6.9E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS03920 f3aa3101202bc222334c44df4c657aa7 332 Gene3D G3DSA:1.10.10.60 235 278 1.8E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS03920 f3aa3101202bc222334c44df4c657aa7 332 SUPERFAMILY SSF46689 228 276 1.79E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS03920 f3aa3101202bc222334c44df4c657aa7 332 SUPERFAMILY SSF52317 11 208 5.29E-36 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS03920 f3aa3101202bc222334c44df4c657aa7 332 Gene3D G3DSA:3.40.50.880 12 234 1.9E-35 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS03920 f3aa3101202bc222334c44df4c657aa7 332 Pfam PF12833 Helix-turn-helix domain 249 327 1.5E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS03920 f3aa3101202bc222334c44df4c657aa7 332 PANTHER PTHR11019:SF61 124 332 2.3E-53 T 23-04-2016 LT40_RS03920 f3aa3101202bc222334c44df4c657aa7 332 PANTHER PTHR11019 124 332 2.3E-53 T 23-04-2016 LT40_RS03920 f3aa3101202bc222334c44df4c657aa7 332 SUPERFAMILY SSF46689 278 329 8.96E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS09710 e351c499eaa070fcf0a8e99b4d5d5b47 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 219 4.5E-25 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS09710 e351c499eaa070fcf0a8e99b4d5d5b47 224 PANTHER PTHR26402:SF575 1 220 4.0E-103 T 23-04-2016 LT40_RS09710 e351c499eaa070fcf0a8e99b4d5d5b47 224 SMART SM00862 144 219 2.7E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS09710 e351c499eaa070fcf0a8e99b4d5d5b47 224 Gene3D G3DSA:3.40.50.2300 1 119 1.5E-38 T 23-04-2016 LT40_RS09710 e351c499eaa070fcf0a8e99b4d5d5b47 224 SUPERFAMILY SSF52172 1 167 1.19E-40 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS09710 e351c499eaa070fcf0a8e99b4d5d5b47 224 SMART SM00448 1 111 1.0E-42 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09710 e351c499eaa070fcf0a8e99b4d5d5b47 224 Gene3D G3DSA:1.10.10.10 124 221 3.7E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09710 e351c499eaa070fcf0a8e99b4d5d5b47 224 PANTHER PTHR26402 1 220 4.0E-103 T 23-04-2016 LT40_RS09710 e351c499eaa070fcf0a8e99b4d5d5b47 224 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 219 9.6E-102 T 23-04-2016 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 LT40_RS09710 e351c499eaa070fcf0a8e99b4d5d5b47 224 Pfam PF00072 Response regulator receiver domain 3 112 6.4E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS13900 fbf89134564a24b43801ab9f11860b31 155 Gene3D G3DSA:3.40.50.10140 3 79 1.9E-4 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 LT40_RS13900 fbf89134564a24b43801ab9f11860b31 155 Pfam PF13676 TIR domain 3 103 3.1E-14 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 LT40_RS13900 fbf89134564a24b43801ab9f11860b31 155 SUPERFAMILY SSF52200 2 106 1.26E-7 T 23-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 LT40_RS16540 cf495a1afd62fe9559da711d69b91c6c 224 Pfam PF04002 RadC-like JAB domain 104 222 2.4E-45 T 23-04-2016 IPR025657 RadC-like JAB domain LT40_RS16540 cf495a1afd62fe9559da711d69b91c6c 224 Gene3D G3DSA:3.40.140.10 102 224 6.8E-51 T 23-04-2016 LT40_RS16540 cf495a1afd62fe9559da711d69b91c6c 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 4.0E-72 T 23-04-2016 IPR001405 RadC protein LT40_RS16540 cf495a1afd62fe9559da711d69b91c6c 224 PANTHER PTHR30471 1 224 6.4E-124 T 23-04-2016 LT40_RS16540 cf495a1afd62fe9559da711d69b91c6c 224 PANTHER PTHR30471:SF5 1 224 6.4E-124 T 23-04-2016 LT40_RS16540 cf495a1afd62fe9559da711d69b91c6c 224 SUPERFAMILY SSF47781 15 91 3.84E-9 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LT40_RS16540 cf495a1afd62fe9559da711d69b91c6c 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site LT40_RS16540 cf495a1afd62fe9559da711d69b91c6c 224 SUPERFAMILY SSF102712 149 200 2.35E-5 T 23-04-2016 LT40_RS15060 aaf80f314b5157406d33f2090f616b57 165 PANTHER PTHR30173 6 160 1.2E-33 T 23-04-2016 LT40_RS15060 aaf80f314b5157406d33f2090f616b57 165 SUPERFAMILY SSF88659 100 160 1.72E-12 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS15060 aaf80f314b5157406d33f2090f616b57 165 Gene3D G3DSA:1.10.10.10 102 161 3.5E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15060 aaf80f314b5157406d33f2090f616b57 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 160 1.2E-25 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS15060 aaf80f314b5157406d33f2090f616b57 165 Pfam PF04542 Sigma-70 region 2 9 74 3.3E-12 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS15060 aaf80f314b5157406d33f2090f616b57 165 SUPERFAMILY SSF88946 6 81 1.14E-14 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS15060 aaf80f314b5157406d33f2090f616b57 165 Pfam PF08281 Sigma-70, region 4 109 156 8.0E-12 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS15060 aaf80f314b5157406d33f2090f616b57 165 Gene3D G3DSA:1.10.1740.10 5 76 1.4E-13 T 23-04-2016 LT40_RS13570 3bdf4ce66e5633db56289a570246d4f6 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 4.0E-45 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13570 3bdf4ce66e5633db56289a570246d4f6 100 Pfam PF00547 Urease, gamma subunit 1 99 1.2E-46 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13570 3bdf4ce66e5633db56289a570246d4f6 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 2.1E-50 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13570 3bdf4ce66e5633db56289a570246d4f6 100 SUPERFAMILY SSF54111 1 99 9.81E-46 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13570 3bdf4ce66e5633db56289a570246d4f6 100 Gene3D G3DSA:3.30.280.10 1 99 5.7E-49 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13570 3bdf4ce66e5633db56289a570246d4f6 100 PANTHER PTHR33569:SF1 2 99 7.7E-44 T 23-04-2016 LT40_RS13570 3bdf4ce66e5633db56289a570246d4f6 100 PIRSF PIRSF001223 1 100 7.2E-50 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13570 3bdf4ce66e5633db56289a570246d4f6 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.217 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 LT40_RS13570 3bdf4ce66e5633db56289a570246d4f6 100 PANTHER PTHR33569 2 99 7.7E-44 T 23-04-2016 LT40_RS01840 87833637bf944ce08128a2b2aacb8db2 322 Pfam PF03734 L,D-transpeptidase catalytic domain 99 232 3.6E-20 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 LT40_RS01840 87833637bf944ce08128a2b2aacb8db2 322 SUPERFAMILY SSF141523 97 232 1.57E-31 T 23-04-2016 LT40_RS01840 87833637bf944ce08128a2b2aacb8db2 322 Gene3D G3DSA:2.40.440.10 92 233 2.4E-34 T 23-04-2016 LT40_RS01840 87833637bf944ce08128a2b2aacb8db2 322 PANTHER PTHR30582 25 311 5.1E-91 T 23-04-2016 LT40_RS01840 87833637bf944ce08128a2b2aacb8db2 322 PANTHER PTHR30582:SF1 25 311 5.1E-91 T 23-04-2016 LT40_RS06440 928ecefd44250c836aa534f481ed7980 500 PANTHER PTHR23508:SF17 4 463 1.5E-264 T 23-04-2016 LT40_RS06440 928ecefd44250c836aa534f481ed7980 500 SUPERFAMILY SSF103661 466 498 1.27E-11 T 23-04-2016 LT40_RS06440 928ecefd44250c836aa534f481ed7980 500 Pfam PF00083 Sugar (and other) transporter 29 448 1.1E-65 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS06440 928ecefd44250c836aa534f481ed7980 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 432 1.4E-139 T 23-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 LT40_RS06440 928ecefd44250c836aa534f481ed7980 500 Gene3D G3DSA:1.20.1250.20 257 445 2.7E-27 T 23-04-2016 LT40_RS06440 928ecefd44250c836aa534f481ed7980 500 Gene3D G3DSA:1.20.1250.20 25 233 2.7E-23 T 23-04-2016 LT40_RS06440 928ecefd44250c836aa534f481ed7980 500 SUPERFAMILY SSF103473 25 442 1.96E-68 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS06440 928ecefd44250c836aa534f481ed7980 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 316 333 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS06440 928ecefd44250c836aa534f481ed7980 500 Pfam PF08946 Osmosensory transporter coiled coil 455 500 3.3E-21 T 23-04-2016 IPR015041 Osmosensory transporter coiled coil LT40_RS06440 928ecefd44250c836aa534f481ed7980 500 PANTHER PTHR23508 4 463 1.5E-264 T 23-04-2016 LT40_RS18145 bb98febc7e03afbaa0352d957ebe4393 274 SUPERFAMILY SSF161098 11 267 4.21E-62 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18145 bb98febc7e03afbaa0352d957ebe4393 274 Gene3D G3DSA:1.10.3720.10 17 268 1.2E-61 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18145 bb98febc7e03afbaa0352d957ebe4393 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 266 1.6E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18145 bb98febc7e03afbaa0352d957ebe4393 274 PANTHER PTHR30193 10 274 9.1E-96 T 23-04-2016 LT40_RS18145 bb98febc7e03afbaa0352d957ebe4393 274 PANTHER PTHR30193:SF20 10 274 9.1E-96 T 23-04-2016 LT40_RS01675 7135dd1c8265f44cdade30592928eb3a 153 SUPERFAMILY SSF47240 4 129 1.03E-7 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS01675 7135dd1c8265f44cdade30592928eb3a 153 Gene3D G3DSA:1.20.1260.10 3 116 3.9E-5 T 23-04-2016 IPR012347 Ferritin-related LT40_RS01675 7135dd1c8265f44cdade30592928eb3a 153 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 8 146 1.5E-46 T 23-04-2016 IPR011971 Conserved hypothetical protein CHP02284 LT40_RS01675 7135dd1c8265f44cdade30592928eb3a 153 PIRSF PIRSF029477 1 152 5.0E-61 T 23-04-2016 IPR016920 Uncharacterised conserved protein UCP029477 LT40_RS01675 7135dd1c8265f44cdade30592928eb3a 153 Pfam PF09537 Domain of unknown function (DUF2383) 8 116 2.4E-36 T 23-04-2016 IPR019052 Domain of unknown function DUF2383 LT40_RS11790 825589e1687b7b83f38c313671d36969 152 Gene3D G3DSA:3.60.21.10 2 143 2.4E-26 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS11790 825589e1687b7b83f38c313671d36969 152 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 142 1.1E-17 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 LT40_RS11790 825589e1687b7b83f38c313671d36969 152 PANTHER PTHR11124 1 139 3.9E-21 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 LT40_RS11790 825589e1687b7b83f38c313671d36969 152 SUPERFAMILY SSF56300 2 150 1.23E-29 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS11790 825589e1687b7b83f38c313671d36969 152 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 139 3.8E-29 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type LT40_RS17205 ce9e61ed0106a8bc6615e32e1520af25 300 SUPERFAMILY SSF118352 229 288 1.44E-18 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 LT40_RS17205 ce9e61ed0106a8bc6615e32e1520af25 300 PIRSF PIRSF005261 4 290 3.9E-76 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LT40_RS17205 ce9e61ed0106a8bc6615e32e1520af25 300 PANTHER PTHR30111 1 294 1.2E-67 T 23-04-2016 LT40_RS17205 ce9e61ed0106a8bc6615e32e1520af25 300 Gene3D G3DSA:3.90.1280.10 231 288 4.3E-24 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 LT40_RS17205 ce9e61ed0106a8bc6615e32e1520af25 300 Hamap MF_00117 33 kDa chaperonin [hslO]. 7 290 30.466 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LT40_RS17205 ce9e61ed0106a8bc6615e32e1520af25 300 Gene3D G3DSA:1.10.287.480 183 230 3.5E-16 T 23-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain LT40_RS17205 ce9e61ed0106a8bc6615e32e1520af25 300 Pfam PF01430 Hsp33 protein 8 279 4.9E-79 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LT40_RS17205 ce9e61ed0106a8bc6615e32e1520af25 300 PANTHER PTHR30111:SF1 1 294 1.2E-67 T 23-04-2016 LT40_RS17205 ce9e61ed0106a8bc6615e32e1520af25 300 SUPERFAMILY SSF64397 8 237 8.24E-67 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 LT40_RS17205 ce9e61ed0106a8bc6615e32e1520af25 300 Gene3D G3DSA:3.55.30.10 6 176 4.9E-57 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 LT40_RS16435 cd0207ddadf5c647b3917deccaae6d4c 465 Gene3D G3DSA:1.10.3150.10 177 452 1.0E-75 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD LT40_RS16435 cd0207ddadf5c647b3917deccaae6d4c 465 PIRSF PIRSF036888 1 465 5.2E-241 T 23-04-2016 IPR014627 Uncharacterised conserved protein UCP036888, signal transduction HD-GYP-like, PA5346 type LT40_RS16435 cd0207ddadf5c647b3917deccaae6d4c 465 SUPERFAMILY SSF55826 20 145 2.35E-11 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LT40_RS16435 cd0207ddadf5c647b3917deccaae6d4c 465 Pfam PF04073 Aminoacyl-tRNA editing domain 40 143 1.0E-13 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LT40_RS16435 cd0207ddadf5c647b3917deccaae6d4c 465 Pfam PF08668 HDOD domain 196 396 7.5E-47 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD LT40_RS16435 cd0207ddadf5c647b3917deccaae6d4c 465 Gene3D G3DSA:3.90.960.10 39 146 1.1E-6 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LT40_RS16435 cd0207ddadf5c647b3917deccaae6d4c 465 PANTHER PTHR33525:SF3 86 460 2.5E-86 T 23-04-2016 LT40_RS16435 cd0207ddadf5c647b3917deccaae6d4c 465 PANTHER PTHR33525 86 460 2.5E-86 T 23-04-2016 LT40_RS16435 cd0207ddadf5c647b3917deccaae6d4c 465 SUPERFAMILY SSF109604 181 452 7.32E-62 T 23-04-2016 LT40_RS11070 4bfe5abdd63151b8bf93a8e395e89a35 252 PANTHER PTHR12993:SF11 38 190 1.9E-23 T 23-04-2016 LT40_RS11070 4bfe5abdd63151b8bf93a8e395e89a35 252 SUPERFAMILY SSF102588 37 251 5.49E-45 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain LT40_RS11070 4bfe5abdd63151b8bf93a8e395e89a35 252 PANTHER PTHR12993 38 190 1.9E-23 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related LT40_RS11070 4bfe5abdd63151b8bf93a8e395e89a35 252 Gene3D G3DSA:3.40.50.10320 38 229 8.4E-39 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain LT40_RS11070 4bfe5abdd63151b8bf93a8e395e89a35 252 Pfam PF02585 GlcNAc-PI de-N-acetylase 42 168 1.5E-23 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 SUPERFAMILY SSF55931 101 467 3.63E-135 T 23-04-2016 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 258 273 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 SMART SM01230 101 378 1.0E-141 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 PANTHER PTHR20852 1 137 4.6E-260 T 23-04-2016 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 PANTHER PTHR20852 160 468 4.6E-260 T 23-04-2016 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 23-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 Gene3D G3DSA:3.30.590.10 105 454 4.8E-137 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 PANTHER PTHR20852:SF15 1 137 4.6E-260 T 23-04-2016 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 PANTHER PTHR20852:SF15 160 468 4.6E-260 T 23-04-2016 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 Pfam PF00120 Glutamine synthetase, catalytic domain 102 465 1.4E-136 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 12 94 1.1E-29 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 467 3.2E-200 T 23-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 385 397 - T 23-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 Gene3D G3DSA:3.10.20.70 5 104 1.6E-36 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS14445 c7648cfb80b3009726fca25a4141d0dc 468 SUPERFAMILY SSF54368 5 99 8.24E-33 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS12725 e40d71c29a430fa2631d2366879fef03 206 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 194 23.235 T 23-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 LT40_RS12725 e40d71c29a430fa2631d2366879fef03 206 Pfam PF01794 Ferric reductase like transmembrane component 43 154 1.8E-16 T 23-04-2016 IPR013130 Ferric reductase transmembrane component-like domain LT40_RS12725 e40d71c29a430fa2631d2366879fef03 206 PANTHER PTHR36964 2 202 4.5E-63 T 23-04-2016 LT40_RS02225 68f07bf6f9fececea804d0cec03f3392 6317 SUPERFAMILY SSF50974 342 403 7.06E-7 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal LT40_RS02225 68f07bf6f9fececea804d0cec03f3392 6317 SUPERFAMILY SSF50974 168 289 7.06E-7 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal LT40_RS02225 68f07bf6f9fececea804d0cec03f3392 6317 SUPERFAMILY SSF51120 6167 6282 5.02E-5 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS03540 5ccfb242e43a2e31146751cd9fb76365 336 SUPERFAMILY SSF47413 15 84 5.63E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS03540 5ccfb242e43a2e31146751cd9fb76365 336 Pfam PF13413 Helix-turn-helix domain 20 78 2.4E-20 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS03540 5ccfb242e43a2e31146751cd9fb76365 336 PANTHER PTHR34475:SF1 3 336 6.9E-43 T 23-04-2016 LT40_RS03540 5ccfb242e43a2e31146751cd9fb76365 336 PANTHER PTHR34475 3 336 6.9E-43 T 23-04-2016 LT40_RS03540 5ccfb242e43a2e31146751cd9fb76365 336 Gene3D G3DSA:1.10.260.40 16 83 2.3E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS03540 5ccfb242e43a2e31146751cd9fb76365 336 SMART SM00530 19 80 0.003 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS03540 5ccfb242e43a2e31146751cd9fb76365 336 Pfam PF13464 Domain of unknown function (DUF4115) 263 334 4.3E-25 T 23-04-2016 IPR025194 Domain of unknown function DUF4115 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 Gene3D G3DSA:1.10.10.60 290 335 1.7E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 290 332 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 Gene3D G3DSA:1.10.10.60 245 289 2.9E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 PANTHER PTHR11019:SF90 81 336 6.4E-51 T 23-04-2016 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 PANTHER PTHR11019:SF90 37 56 6.4E-51 T 23-04-2016 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 PANTHER PTHR11019 81 336 6.4E-51 T 23-04-2016 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 PANTHER PTHR11019 37 56 6.4E-51 T 23-04-2016 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 SUPERFAMILY SSF46689 239 287 1.34E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 Pfam PF01965 DJ-1/PfpI family 51 201 5.5E-11 T 23-04-2016 IPR002818 DJ-1/PfpI LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 SUPERFAMILY SSF46689 289 337 2.24E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 Pfam PF12833 Helix-turn-helix domain 259 334 1.6E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 SMART SM00342 253 336 3.7E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 Gene3D G3DSA:3.40.50.880 35 244 7.0E-26 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS07150 28f4771acfc1932664e7b8d7f69d2a9a 340 SUPERFAMILY SSF52317 35 222 2.46E-30 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS01930 3d4cd55225a9b4c9cc84a873d24218cc 188 SUPERFAMILY SSF88659 119 182 2.43E-10 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS01930 3d4cd55225a9b4c9cc84a873d24218cc 188 Gene3D G3DSA:1.10.1740.10 5 121 1.6E-32 T 23-04-2016 LT40_RS01930 3d4cd55225a9b4c9cc84a873d24218cc 188 SUPERFAMILY SSF88946 7 114 3.92E-27 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS01930 3d4cd55225a9b4c9cc84a873d24218cc 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 181 1.1E-30 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS01930 3d4cd55225a9b4c9cc84a873d24218cc 188 Pfam PF04542 Sigma-70 region 2 31 98 1.8E-19 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS01930 3d4cd55225a9b4c9cc84a873d24218cc 188 PANTHER PTHR30173:SF26 2 184 2.5E-86 T 23-04-2016 LT40_RS01930 3d4cd55225a9b4c9cc84a873d24218cc 188 Pfam PF04545 Sigma-70, region 4 136 180 3.2E-11 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS01930 3d4cd55225a9b4c9cc84a873d24218cc 188 Gene3D G3DSA:1.10.10.10 137 183 4.8E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01930 3d4cd55225a9b4c9cc84a873d24218cc 188 PANTHER PTHR30173 2 184 2.5E-86 T 23-04-2016 LT40_RS02775 2c69335464f4818c7d9e17156cd36ba9 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 211 1.2E-13 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS02775 2c69335464f4818c7d9e17156cd36ba9 220 PANTHER PTHR26402 1 218 7.5E-24 T 23-04-2016 LT40_RS02775 2c69335464f4818c7d9e17156cd36ba9 220 SMART SM00862 136 211 1.7E-12 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS02775 2c69335464f4818c7d9e17156cd36ba9 220 Gene3D G3DSA:1.10.10.10 126 213 1.9E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02775 2c69335464f4818c7d9e17156cd36ba9 220 SUPERFAMILY SSF46894 122 212 7.37E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS02775 2c69335464f4818c7d9e17156cd36ba9 220 Gene3D G3DSA:3.40.50.2300 13 113 7.8E-9 T 23-04-2016 LT40_RS02775 2c69335464f4818c7d9e17156cd36ba9 220 PANTHER PTHR26402:SF578 1 218 7.5E-24 T 23-04-2016 LT40_RS02775 2c69335464f4818c7d9e17156cd36ba9 220 SUPERFAMILY SSF52172 13 115 6.01E-10 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 SUPERFAMILY SSF55785 126 240 8.19E-11 T 23-04-2016 IPR000014 PAS domain LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 Gene3D G3DSA:1.10.287.130 278 341 1.3E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 Pfam PF00512 His Kinase A (phospho-acceptor) domain 282 352 8.2E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 Pfam PF00072 Response regulator receiver domain 536 645 5.3E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 Pfam PF00072 Response regulator receiver domain 7 119 1.4E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 PANTHER PTHR24423 5 10 2.5E-114 T 23-04-2016 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 PANTHER PTHR24423 121 240 2.5E-114 T 23-04-2016 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 PANTHER PTHR24423 266 652 2.5E-114 T 23-04-2016 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 PANTHER PTHR24423:SF527 5 10 2.5E-114 T 23-04-2016 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 PANTHER PTHR24423:SF527 121 240 2.5E-114 T 23-04-2016 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 PANTHER PTHR24423:SF527 266 652 2.5E-114 T 23-04-2016 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 Gene3D G3DSA:3.40.50.2300 532 650 4.8E-30 T 23-04-2016 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 SMART SM00387 396 514 1.0E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 Gene3D G3DSA:3.30.450.20 130 240 2.1E-12 T 23-04-2016 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 SUPERFAMILY SSF47384 277 352 2.55E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 Gene3D G3DSA:3.30.565.10 342 512 3.1E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 Pfam PF00989 PAS fold 138 239 6.3E-5 T 23-04-2016 IPR013767 PAS fold GO:0006355 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 SMART SM00448 5 119 7.9E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 SMART SM00448 533 645 2.2E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 SUPERFAMILY SSF55874 346 512 3.67E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 1.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 511 1.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 492 1.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 1.8E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 Gene3D G3DSA:3.40.50.2300 4 129 4.6E-31 T 23-04-2016 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 SUPERFAMILY SSF52172 4 142 1.57E-32 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 SUPERFAMILY SSF52172 532 650 3.27E-26 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 SMART SM00388 282 355 1.1E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10090 60bea7cdeca43692e4714edf69dd125e 656 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 512 6.7E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS12630 59fac34bdf49c19de37ad32faedfc248 266 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 237 257 2.6E-7 T 23-04-2016 LT40_RS12630 59fac34bdf49c19de37ad32faedfc248 266 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 217 236 2.6E-7 T 23-04-2016 LT40_RS12630 59fac34bdf49c19de37ad32faedfc248 266 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 216 2.6E-7 T 23-04-2016 LT40_RS12630 59fac34bdf49c19de37ad32faedfc248 266 Pfam PF00691 OmpA family 153 248 3.4E-24 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS12630 59fac34bdf49c19de37ad32faedfc248 266 Gene3D G3DSA:3.30.1330.60 142 254 1.7E-39 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS12630 59fac34bdf49c19de37ad32faedfc248 266 SUPERFAMILY SSF103088 138 253 1.83E-36 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS12630 59fac34bdf49c19de37ad32faedfc248 266 PRINTS PR01021 OMPA domain signature 199 215 1.3E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS12630 59fac34bdf49c19de37ad32faedfc248 266 PRINTS PR01021 OMPA domain signature 184 199 1.3E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS12630 59fac34bdf49c19de37ad32faedfc248 266 PRINTS PR01021 OMPA domain signature 154 176 1.3E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS12630 59fac34bdf49c19de37ad32faedfc248 266 PANTHER PTHR30128 142 264 8.9E-43 T 23-04-2016 LT40_RS12630 59fac34bdf49c19de37ad32faedfc248 266 Pfam PF14346 Domain of unknown function (DUF4398) 11 111 4.9E-21 T 23-04-2016 IPR025511 Domain of unknown function DUF4398 LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 Gene3D G3DSA:1.20.970.10 153 186 1.7E-38 T 23-04-2016 LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 Gene3D G3DSA:1.20.970.10 1 65 1.7E-38 T 23-04-2016 LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 SUPERFAMILY SSF47648 1 69 2.09E-19 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 Pfam PF00591 Glycosyl transferase family, a/b domain 76 329 2.1E-98 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 PANTHER PTHR11922 1 348 8.9E-102 T 23-04-2016 LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 5 339 37.564 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 64 2.6E-17 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 PANTHER PTHR11922:SF5 1 348 8.9E-102 T 23-04-2016 LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 Gene3D G3DSA:3.40.1030.10 187 345 1.5E-84 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 Gene3D G3DSA:3.40.1030.10 76 152 1.5E-84 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 SUPERFAMILY SSF52418 75 340 3.66E-88 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LT40_RS18170 28e248e7e7537da78fbd27687144bb59 349 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 337 4.1E-121 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 LT40_RS12555 ce113b9326c8c7101715234617d91a45 550 PANTHER PTHR13847:SF214 16 548 7.8E-198 T 23-04-2016 LT40_RS12555 ce113b9326c8c7101715234617d91a45 550 Gene3D G3DSA:3.50.50.60 170 352 4.2E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12555 ce113b9326c8c7101715234617d91a45 550 Gene3D G3DSA:3.50.50.60 27 95 4.2E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12555 ce113b9326c8c7101715234617d91a45 550 SUPERFAMILY SSF51905 24 88 3.11E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12555 ce113b9326c8c7101715234617d91a45 550 SUPERFAMILY SSF51905 122 354 3.11E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12555 ce113b9326c8c7101715234617d91a45 550 PANTHER PTHR13847 16 548 7.8E-198 T 23-04-2016 LT40_RS12555 ce113b9326c8c7101715234617d91a45 550 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 29 513 4.6E-209 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 LT40_RS12555 ce113b9326c8c7101715234617d91a45 550 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 25 515 54.274 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 LT40_RS12555 ce113b9326c8c7101715234617d91a45 550 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 28 515 4.2E-235 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 SUPERFAMILY SSF56507 905 1229 7.72E-126 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 PANTHER PTHR21091:SF111 1 405 7.1E-177 T 23-04-2016 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 Gene3D G3DSA:3.10.196.10 961 1229 7.0E-108 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 SUPERFAMILY SSF52242 744 896 4.19E-44 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 942 1212 2.5E-121 T 23-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 SUPERFAMILY SSF82282 11 402 3.14E-115 T 23-04-2016 IPR003726 Homocysteine-binding domain LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 Gene3D G3DSA:1.10.1240.10 651 738 5.6E-38 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 Gene3D G3DSA:3.40.50.280 747 897 3.9E-62 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 SUPERFAMILY SSF47644 653 740 1.31E-27 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 PANTHER PTHR21091 1 405 7.1E-177 T 23-04-2016 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 PIRSF PIRSF000381 4 1199 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 Pfam PF02574 Homocysteine S-methyltransferase 20 328 9.5E-89 T 23-04-2016 IPR003726 Homocysteine-binding domain LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 Gene3D G3DSA:3.20.20.20 367 639 7.9E-113 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 Gene3D G3DSA:3.20.20.330 8 366 1.4E-125 T 23-04-2016 IPR003726 Homocysteine-binding domain LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 SUPERFAMILY SSF51717 359 632 3.53E-88 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 Pfam PF00809 Pterin binding enzyme 363 601 2.4E-56 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 Pfam PF02310 B12 binding domain 750 843 2.0E-18 T 23-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 Pfam PF02607 B12 binding domain 661 733 6.3E-24 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 TIGRFAM TIGR02082 metH: methionine synthase 15 1196 0.0 T 23-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 LT40_RS10265 a9ae4efc6d77be6e299c5c3b547db57b 1230 SMART SM01018 658 741 8.0E-43 T 23-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain LT40_RS00635 26a29f57d64609f1f90b1e1193ecd730 236 SMART SM00363 5 61 1.8E-4 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS00635 26a29f57d64609f1f90b1e1193ecd730 236 SUPERFAMILY SSF55120 103 234 7.19E-17 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00635 26a29f57d64609f1f90b1e1193ecd730 236 PANTHER PTHR21600 1 234 3.9E-89 T 23-04-2016 LT40_RS00635 26a29f57d64609f1f90b1e1193ecd730 236 Pfam PF01479 S4 domain 15 47 2.7E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS00635 26a29f57d64609f1f90b1e1193ecd730 236 Gene3D G3DSA:3.10.290.10 3 63 4.9E-17 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS00635 26a29f57d64609f1f90b1e1193ecd730 236 SUPERFAMILY SSF55174 5 48 2.09E-10 T 23-04-2016 LT40_RS00635 26a29f57d64609f1f90b1e1193ecd730 236 PANTHER PTHR21600:SF21 1 234 3.9E-89 T 23-04-2016 LT40_RS14480 db73e5b8d99e20d7f707cb4cf2ab8562 160 Hamap MF_00821 Protein-export protein SecB [secB]. 1 151 32.604 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LT40_RS14480 db73e5b8d99e20d7f707cb4cf2ab8562 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 19 36 1.1E-36 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LT40_RS14480 db73e5b8d99e20d7f707cb4cf2ab8562 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 103 125 1.1E-36 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LT40_RS14480 db73e5b8d99e20d7f707cb4cf2ab8562 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 79 99 1.1E-36 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LT40_RS14480 db73e5b8d99e20d7f707cb4cf2ab8562 160 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 129 147 1.1E-36 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LT40_RS14480 db73e5b8d99e20d7f707cb4cf2ab8562 160 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 12 146 4.8E-53 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LT40_RS14480 db73e5b8d99e20d7f707cb4cf2ab8562 160 PANTHER PTHR36918 1 160 1.0E-81 T 23-04-2016 LT40_RS14480 db73e5b8d99e20d7f707cb4cf2ab8562 160 Pfam PF02556 Preprotein translocase subunit SecB 12 149 2.4E-53 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LT40_RS14480 db73e5b8d99e20d7f707cb4cf2ab8562 160 PANTHER PTHR36918:SF1 1 160 1.0E-81 T 23-04-2016 LT40_RS14480 db73e5b8d99e20d7f707cb4cf2ab8562 160 Gene3D G3DSA:3.10.420.10 11 155 6.4E-56 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LT40_RS14480 db73e5b8d99e20d7f707cb4cf2ab8562 160 SUPERFAMILY SSF54611 6 148 1.9E-51 T 23-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LT40_RS17060 118ac17be76153b6a9de79869a4b67c3 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 249 263 1.2E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS17060 118ac17be76153b6a9de79869a4b67c3 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 107 1.2E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS17060 118ac17be76153b6a9de79869a4b67c3 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 141 154 1.2E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS17060 118ac17be76153b6a9de79869a4b67c3 307 Gene3D G3DSA:3.40.50.1820 50 307 1.6E-32 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS17060 118ac17be76153b6a9de79869a4b67c3 307 PANTHER PTHR11614 51 300 3.4E-29 T 23-04-2016 LT40_RS17060 118ac17be76153b6a9de79869a4b67c3 307 Pfam PF12146 Serine aminopeptidase, S33 64 292 1.2E-30 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 LT40_RS17060 118ac17be76153b6a9de79869a4b67c3 307 SUPERFAMILY SSF53474 51 297 6.35E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.8E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 Gene3D G3DSA:1.10.10.10 2 88 2.5E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 PANTHER PTHR30126 2 305 4.7E-138 T 23-04-2016 LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 SUPERFAMILY SSF46785 2 112 3.88E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 Gene3D G3DSA:3.40.190.10 182 262 4.5E-15 T 23-04-2016 LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 PANTHER PTHR30126:SF25 2 305 4.7E-138 T 23-04-2016 LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 SUPERFAMILY SSF53850 88 287 6.67E-37 T 23-04-2016 LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 Gene3D G3DSA:3.40.190.10 89 181 3.5E-18 T 23-04-2016 LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 Pfam PF03466 LysR substrate binding domain 88 287 2.9E-37 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.9E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.9E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01175 9b8436e2283d4adf3b06f5432a8fdbb4 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.9E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS12345 2c4c355bdd604ba312180f8572d324b4 200 SUPERFAMILY SSF159594 22 192 1.05E-28 T 23-04-2016 LT40_RS12345 2c4c355bdd604ba312180f8572d324b4 200 Gene3D G3DSA:3.40.50.10610 16 193 3.3E-30 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component LT40_RS12345 2c4c355bdd604ba312180f8572d324b4 200 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 25 185 8.9E-42 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component LT40_RS04360 5f34161d834193325407a7fa3a5440b4 262 SUPERFAMILY SSF53474 4 260 2.49E-59 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS04360 5f34161d834193325407a7fa3a5440b4 262 Pfam PF00561 alpha/beta hydrolase fold 22 245 2.3E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS04360 5f34161d834193325407a7fa3a5440b4 262 PANTHER PTHR10992 4 262 1.4E-113 T 23-04-2016 LT40_RS04360 5f34161d834193325407a7fa3a5440b4 262 Gene3D G3DSA:3.40.50.1820 4 260 4.4E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS04360 5f34161d834193325407a7fa3a5440b4 262 PANTHER PTHR10992:SF861 4 262 1.4E-113 T 23-04-2016 LT40_RS04360 5f34161d834193325407a7fa3a5440b4 262 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 11 260 4.2E-101 T 23-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 LT40_RS13730 3f3f058a413c5bda19805bf5e006bc66 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal LT40_RS13730 3f3f058a413c5bda19805bf5e006bc66 148 Gene3D G3DSA:3.10.430.100 61 147 1.3E-29 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal LT40_RS13730 3f3f058a413c5bda19805bf5e006bc66 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 2.5E-19 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal LT40_RS13730 3f3f058a413c5bda19805bf5e006bc66 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.298 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13730 3f3f058a413c5bda19805bf5e006bc66 148 Gene3D G3DSA:3.40.5.10 1 52 2.6E-23 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal LT40_RS13730 3f3f058a413c5bda19805bf5e006bc66 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 1.7E-27 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal LT40_RS13730 3f3f058a413c5bda19805bf5e006bc66 148 SUPERFAMILY SSF55658 1 56 6.8E-17 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal LT40_RS13730 3f3f058a413c5bda19805bf5e006bc66 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 2.6E-48 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13730 3f3f058a413c5bda19805bf5e006bc66 148 PANTHER PTHR21368 1 147 2.6E-50 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS13730 3f3f058a413c5bda19805bf5e006bc66 148 SUPERFAMILY SSF55653 60 147 5.89E-26 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal LT40_RS12795 059e546130f80b810d2477d6fc3e882b 147 SUPERFAMILY SSF109635 13 105 1.03E-32 T 23-04-2016 LT40_RS12795 059e546130f80b810d2477d6fc3e882b 147 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 107 139 3.5E-10 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 LT40_RS12795 059e546130f80b810d2477d6fc3e882b 147 PANTHER PTHR33823 4 147 5.2E-63 T 23-04-2016 LT40_RS12795 059e546130f80b810d2477d6fc3e882b 147 PANTHER PTHR33823:SF2 4 147 5.2E-63 T 23-04-2016 LT40_RS12795 059e546130f80b810d2477d6fc3e882b 147 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 24 146 29.885 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 LT40_RS12795 059e546130f80b810d2477d6fc3e882b 147 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 110 134 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site LT40_RS12795 059e546130f80b810d2477d6fc3e882b 147 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 28 136 5.3E-51 T 23-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 LT40_RS12795 059e546130f80b810d2477d6fc3e882b 147 SUPERFAMILY SSF57716 107 145 2.42E-10 T 23-04-2016 LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 PANTHER PTHR13734 1 259 3.7E-66 T 23-04-2016 LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 PIRSF PIRSF000813 1 407 9.7E-195 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 54.823 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 SMART SM00471 224 359 0.0099 T 23-04-2016 IPR003607 HD/PDEase domain LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.1E-12 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 Pfam PF01743 Poly A polymerase head domain 4 121 1.9E-16 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 Pfam PF01966 HD domain 231 320 1.0E-10 T 23-04-2016 IPR006674 HD domain LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 Gene3D G3DSA:1.10.3090.10 122 361 1.7E-52 T 23-04-2016 LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 SUPERFAMILY SSF81891 121 401 7.85E-51 T 23-04-2016 LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 Gene3D G3DSA:3.30.460.10 1 121 7.4E-28 T 23-04-2016 LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 SUPERFAMILY SSF81301 1 119 2.83E-28 T 23-04-2016 LT40_RS18045 5b8d731a6bffb37f705b21c63d61a6bc 407 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 40.75 T 23-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 LT40_RS05105 9ad05dd37361ea6534bdcd4f6ae0a1fb 319 Gene3D G3DSA:1.10.3720.10 96 305 2.0E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05105 9ad05dd37361ea6534bdcd4f6ae0a1fb 319 PANTHER PTHR30465 1 311 1.5E-98 T 23-04-2016 LT40_RS05105 9ad05dd37361ea6534bdcd4f6ae0a1fb 319 SUPERFAMILY SSF161098 97 295 2.62E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05105 9ad05dd37361ea6534bdcd4f6ae0a1fb 319 PANTHER PTHR30465:SF0 1 311 1.5E-98 T 23-04-2016 LT40_RS05105 9ad05dd37361ea6534bdcd4f6ae0a1fb 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 310 7.0E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13645 4f471fe6fb1cd8dadcb9e567d5adf5e1 204 PIRSF PIRSF005624 2 203 5.8E-45 T 23-04-2016 LT40_RS13645 4f471fe6fb1cd8dadcb9e567d5adf5e1 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 6 201 8.3E-102 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 LT40_RS13645 4f471fe6fb1cd8dadcb9e567d5adf5e1 204 PANTHER PTHR31715 1 202 3.2E-127 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 LT40_RS13645 4f471fe6fb1cd8dadcb9e567d5adf5e1 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 178 4.7E-35 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LT40_RS13645 4f471fe6fb1cd8dadcb9e567d5adf5e1 204 SUPERFAMILY SSF52540 4 197 8.58E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13645 4f471fe6fb1cd8dadcb9e567d5adf5e1 204 Gene3D G3DSA:3.40.50.300 5 196 1.1E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13645 4f471fe6fb1cd8dadcb9e567d5adf5e1 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 4 202 47.286 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 628 4.4E-47 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 SUPERFAMILY SSF58104 321 630 5.62E-73 T 23-04-2016 LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 Gene3D G3DSA:1.10.287.950 382 599 7.5E-53 T 23-04-2016 LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 SMART SM00304 388 448 40.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 SMART SM00304 299 353 1.3E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 SMART SM00283 368 629 1.2E-82 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 SUPERFAMILY SSF103190 95 185 7.06E-13 T 23-04-2016 IPR029151 Periplasmic sensor domain-like LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 Pfam PF02743 Cache domain 36 260 1.8E-36 T 23-04-2016 IPR033479 Double Cache domain 1 LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 PANTHER PTHR32089 11 630 1.1E-279 T 23-04-2016 LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 Pfam PF00672 HAMP domain 280 349 4.2E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 PANTHER PTHR32089:SF39 11 630 1.1E-279 T 23-04-2016 LT40_RS02725 417f41cafef28edc1ac0bda9017a18e0 630 Gene3D G3DSA:3.30.450.20 141 276 3.0E-30 T 23-04-2016 LT40_RS05330 f264812dc4649d9b1d70b67f63c8934a 113 PANTHER PTHR10293 1 107 3.8E-52 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related LT40_RS05330 f264812dc4649d9b1d70b67f63c8934a 113 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.0E-44 T 23-04-2016 IPR004480 Monothiol glutaredoxin-related LT40_RS05330 f264812dc4649d9b1d70b67f63c8934a 113 Pfam PF00462 Glutaredoxin 16 80 9.9E-17 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 LT40_RS05330 f264812dc4649d9b1d70b67f63c8934a 113 PIRSF PIRSF005894 1 107 4.4E-48 T 23-04-2016 IPR014434 Monothiol glutaredoxin LT40_RS05330 f264812dc4649d9b1d70b67f63c8934a 113 SUPERFAMILY SSF52833 1 104 2.99E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS05330 f264812dc4649d9b1d70b67f63c8934a 113 Gene3D G3DSA:3.40.30.10 7 101 2.3E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS00175 374a68a5091453aa318c6695f0399e6b 252 SUPERFAMILY SSF56281 1 220 1.83E-42 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS00175 374a68a5091453aa318c6695f0399e6b 252 PANTHER PTHR13754 1 252 2.6E-71 T 23-04-2016 LT40_RS00175 374a68a5091453aa318c6695f0399e6b 252 Gene3D G3DSA:3.60.15.10 1 225 5.4E-35 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS00175 374a68a5091453aa318c6695f0399e6b 252 SMART SM00849 11 171 1.5E-16 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS00175 374a68a5091453aa318c6695f0399e6b 252 PANTHER PTHR13754:SF15 1 252 2.6E-71 T 23-04-2016 LT40_RS00175 374a68a5091453aa318c6695f0399e6b 252 Pfam PF12706 Beta-lactamase superfamily domain 23 211 2.9E-23 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 PANTHER PTHR13847 1 373 7.9E-210 T 23-04-2016 LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 Gene3D G3DSA:3.30.1360.120 131 235 2.1E-31 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 Gene3D G3DSA:3.30.1360.120 6 70 7.3E-25 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 PIRSF PIRSF006487 1 374 1.1E-79 T 23-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 SUPERFAMILY SSF101790 279 373 1.23E-24 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 PANTHER PTHR13847:SF209 1 373 7.9E-210 T 23-04-2016 LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 Gene3D G3DSA:3.30.70.1400 71 130 5.4E-34 T 23-04-2016 LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 258 7.6E-91 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 Gene3D G3DSA:2.40.30.110 288 373 3.3E-24 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 SUPERFAMILY SSF103025 6 287 1.88E-92 T 23-04-2016 LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 271 364 1.7E-21 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS03160 fbde742a559c6771afa8811f498e6fc6 374 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 368 1.3E-108 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS12065 c289a53321d060e72ac3232d09715966 100 Gene3D G3DSA:2.40.10.220 7 95 1.7E-7 T 23-04-2016 LT40_RS12065 c289a53321d060e72ac3232d09715966 100 SUPERFAMILY SSF141371 7 94 2.35E-15 T 23-04-2016 LT40_RS12065 c289a53321d060e72ac3232d09715966 100 Pfam PF07238 PilZ domain 10 95 4.5E-12 T 23-04-2016 IPR009875 PilZ domain GO:0035438 LT40_RS02040 684bdaca795e13710553e9d28a37d75e 364 Gene3D G3DSA:3.40.50.300 3 231 1.5E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02040 684bdaca795e13710553e9d28a37d75e 364 PANTHER PTHR24220:SF282 257 289 2.3E-114 T 23-04-2016 LT40_RS02040 684bdaca795e13710553e9d28a37d75e 364 PANTHER PTHR24220:SF282 4 239 2.3E-114 T 23-04-2016 LT40_RS02040 684bdaca795e13710553e9d28a37d75e 364 PANTHER PTHR24220 257 289 2.3E-114 T 23-04-2016 LT40_RS02040 684bdaca795e13710553e9d28a37d75e 364 PANTHER PTHR24220 4 239 2.3E-114 T 23-04-2016 LT40_RS02040 684bdaca795e13710553e9d28a37d75e 364 SMART SM00382 27 213 0.0026 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02040 684bdaca795e13710553e9d28a37d75e 364 Gene3D G3DSA:2.40.50.140 277 338 1.3E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS02040 684bdaca795e13710553e9d28a37d75e 364 SUPERFAMILY SSF52540 4 240 2.59E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02040 684bdaca795e13710553e9d28a37d75e 364 Pfam PF00005 ABC transporter 19 160 1.9E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS02040 684bdaca795e13710553e9d28a37d75e 364 SUPERFAMILY SSF50331 236 353 1.87E-20 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS16565 3eeffd53c0896a225ba27e71e2bebbc0 497 PANTHER PTHR11699:SF210 1 497 0.0 T 23-04-2016 LT40_RS16565 3eeffd53c0896a225ba27e71e2bebbc0 497 Gene3D G3DSA:3.40.605.10 21 280 6.7E-91 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS16565 3eeffd53c0896a225ba27e71e2bebbc0 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 266 273 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS16565 3eeffd53c0896a225ba27e71e2bebbc0 497 SUPERFAMILY SSF53720 13 496 3.53E-163 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS16565 3eeffd53c0896a225ba27e71e2bebbc0 497 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS16565 3eeffd53c0896a225ba27e71e2bebbc0 497 Pfam PF00171 Aldehyde dehydrogenase family 30 492 1.2E-166 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS16565 3eeffd53c0896a225ba27e71e2bebbc0 497 PANTHER PTHR11699 1 497 0.0 T 23-04-2016 LT40_RS16565 3eeffd53c0896a225ba27e71e2bebbc0 497 Gene3D G3DSA:3.40.309.10 281 468 2.6E-69 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS00900 7f70c3103834cb2d206d832da7f16f94 69 SMART SM00357 6 69 7.5E-26 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 LT40_RS00900 7f70c3103834cb2d206d832da7f16f94 69 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 3.2E-29 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS00900 7f70c3103834cb2d206d832da7f16f94 69 PANTHER PTHR11544 1 69 9.4E-36 T 23-04-2016 LT40_RS00900 7f70c3103834cb2d206d832da7f16f94 69 Gene3D G3DSA:2.40.50.140 5 67 2.4E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS00900 7f70c3103834cb2d206d832da7f16f94 69 PANTHER PTHR11544:SF63 1 69 9.4E-36 T 23-04-2016 LT40_RS00900 7f70c3103834cb2d206d832da7f16f94 69 SUPERFAMILY SSF50249 3 68 5.14E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS00900 7f70c3103834cb2d206d832da7f16f94 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 23-04-2016 IPR019844 Cold-shock conserved site LT40_RS00900 7f70c3103834cb2d206d832da7f16f94 69 PRINTS PR00050 Cold shock protein signature 7 22 2.6E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS00900 7f70c3103834cb2d206d832da7f16f94 69 PRINTS PR00050 Cold shock protein signature 27 36 2.6E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS00900 7f70c3103834cb2d206d832da7f16f94 69 PRINTS PR00050 Cold shock protein signature 42 60 2.6E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS00900 7f70c3103834cb2d206d832da7f16f94 69 PIRSF PIRSF002599 1 69 7.7E-23 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 LT40_RS15545 62606bcff3b9f9f4dc7205602b09de55 406 SUPERFAMILY SSF89796 1 406 7.85E-141 T 23-04-2016 IPR023606 CoA-transferase family III domain LT40_RS15545 62606bcff3b9f9f4dc7205602b09de55 406 Pfam PF02515 CoA-transferase family III 4 382 1.1E-130 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 LT40_RS15545 62606bcff3b9f9f4dc7205602b09de55 406 Gene3D G3DSA:3.40.50.10540 315 406 5.2E-120 T 23-04-2016 IPR023606 CoA-transferase family III domain LT40_RS15545 62606bcff3b9f9f4dc7205602b09de55 406 Gene3D G3DSA:3.40.50.10540 2 226 5.2E-120 T 23-04-2016 IPR023606 CoA-transferase family III domain LT40_RS15545 62606bcff3b9f9f4dc7205602b09de55 406 PANTHER PTHR24023 31 392 2.7E-34 T 23-04-2016 LT40_RS15545 62606bcff3b9f9f4dc7205602b09de55 406 Gene3D G3DSA:3.30.1540.10 232 314 5.8E-34 T 23-04-2016 LT40_RS15545 62606bcff3b9f9f4dc7205602b09de55 406 PANTHER PTHR24023:SF593 31 392 2.7E-34 T 23-04-2016 LT40_RS02675 3ed3346a42beaf3e4d4e68c20b514b05 240 PANTHER PTHR23416:SF69 51 229 8.0E-45 T 23-04-2016 LT40_RS02675 3ed3346a42beaf3e4d4e68c20b514b05 240 PANTHER PTHR23416 51 229 8.0E-45 T 23-04-2016 LT40_RS02675 3ed3346a42beaf3e4d4e68c20b514b05 240 Gene3D G3DSA:2.160.10.10 39 203 2.0E-41 T 23-04-2016 LT40_RS02675 3ed3346a42beaf3e4d4e68c20b514b05 240 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LT40_RS02675 3ed3346a42beaf3e4d4e68c20b514b05 240 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 56 89 1.8E-4 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS02675 3ed3346a42beaf3e4d4e68c20b514b05 240 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 158 2.3E-6 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS02675 3ed3346a42beaf3e4d4e68c20b514b05 240 SUPERFAMILY SSF51161 46 196 2.22E-38 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS04480 dce2388be67a1811abfb570d98bdb1ab 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 81 2.8E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS04480 dce2388be67a1811abfb570d98bdb1ab 237 SMART SM00345 23 81 1.3E-12 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS04480 dce2388be67a1811abfb570d98bdb1ab 237 SUPERFAMILY SSF48008 87 219 6.8E-21 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS04480 dce2388be67a1811abfb570d98bdb1ab 237 Gene3D G3DSA:1.20.120.530 85 220 1.8E-22 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS04480 dce2388be67a1811abfb570d98bdb1ab 237 Gene3D G3DSA:1.10.10.10 13 82 7.9E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04480 dce2388be67a1811abfb570d98bdb1ab 237 PANTHER PTHR11751 18 111 4.3E-20 T 23-04-2016 LT40_RS04480 dce2388be67a1811abfb570d98bdb1ab 237 SUPERFAMILY SSF46785 17 85 3.09E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04480 dce2388be67a1811abfb570d98bdb1ab 237 SMART SM00895 91 214 1.3E-12 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS04480 dce2388be67a1811abfb570d98bdb1ab 237 Pfam PF07729 FCD domain 91 213 3.0E-19 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 PANTHER PTHR11406 1 386 3.5E-195 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 23-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 PIRSF PIRSF000724 1 387 2.3E-132 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 Gene3D G3DSA:3.40.50.1270 175 371 5.3E-81 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 Gene3D G3DSA:3.40.50.1260 5 174 9.0E-64 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.739 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 7.2E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 7.2E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 7.2E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 7.2E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 7.2E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 7.2E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 7.2E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 7.2E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 7.2E-79 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 Pfam PF00162 Phosphoglycerate kinase 6 373 4.2E-138 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS17340 6d3d7b4185c35b2e61fde22ff9e74fcd 387 SUPERFAMILY SSF53748 4 383 3.65E-144 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 LT40_RS00365 89b6cc07130066955bc6e3cca02ccaff 344 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 4 341 43.718 T 23-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 LT40_RS00365 89b6cc07130066955bc6e3cca02ccaff 344 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 5 344 1.2E-186 T 23-04-2016 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117|UniPathway: UPA00034 LT40_RS00365 89b6cc07130066955bc6e3cca02ccaff 344 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 132 172 2.6E-15 T 23-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 LT40_RS00365 89b6cc07130066955bc6e3cca02ccaff 344 Gene3D G3DSA:2.160.10.10 173 341 1.3E-33 T 23-04-2016 LT40_RS00365 89b6cc07130066955bc6e3cca02ccaff 344 Gene3D G3DSA:3.30.60.70 132 172 6.7E-18 T 23-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 LT40_RS00365 89b6cc07130066955bc6e3cca02ccaff 344 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 254 286 2.3E-12 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS00365 89b6cc07130066955bc6e3cca02ccaff 344 SUPERFAMILY SSF51161 97 293 3.6E-36 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS08405 94a5c89990a9566bcd1db442cf612607 511 SUPERFAMILY SSF103473 253 424 9.02E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS08405 94a5c89990a9566bcd1db442cf612607 511 SUPERFAMILY SSF103473 13 200 9.02E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS08405 94a5c89990a9566bcd1db442cf612607 511 SUPERFAMILY SSF103473 474 498 9.02E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS08405 94a5c89990a9566bcd1db442cf612607 511 PANTHER PTHR23501 4 500 8.0E-159 T 23-04-2016 LT40_RS08405 94a5c89990a9566bcd1db442cf612607 511 PANTHER PTHR23501:SF65 4 500 8.0E-159 T 23-04-2016 LT40_RS08405 94a5c89990a9566bcd1db442cf612607 511 Pfam PF07690 Major Facilitator Superfamily 23 414 1.9E-40 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS08405 94a5c89990a9566bcd1db442cf612607 511 Gene3D G3DSA:1.20.1250.20 481 502 3.2E-11 T 23-04-2016 LT40_RS08405 94a5c89990a9566bcd1db442cf612607 511 Gene3D G3DSA:1.20.1250.20 271 447 3.2E-11 T 23-04-2016 LT40_RS08405 94a5c89990a9566bcd1db442cf612607 511 Gene3D G3DSA:1.20.1250.20 16 195 9.4E-28 T 23-04-2016 LT40_RS14660 5121b021a3ea9098429212e72b29b545 251 Pfam PF00912 Transglycosylase 65 229 8.8E-44 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 LT40_RS14660 5121b021a3ea9098429212e72b29b545 251 PANTHER PTHR30400 10 243 4.9E-105 T 23-04-2016 LT40_RS14660 5121b021a3ea9098429212e72b29b545 251 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 16 233 6.8E-95 T 23-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 LT40_RS14660 5121b021a3ea9098429212e72b29b545 251 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 12 235 43.432 T 23-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 LT40_RS14660 5121b021a3ea9098429212e72b29b545 251 Gene3D G3DSA:1.10.3810.10 64 233 1.3E-53 T 23-04-2016 LT40_RS14660 5121b021a3ea9098429212e72b29b545 251 PANTHER PTHR30400:SF0 10 243 4.9E-105 T 23-04-2016 LT40_RS14660 5121b021a3ea9098429212e72b29b545 251 SUPERFAMILY SSF53955 63 234 7.03E-55 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 SUPERFAMILY SSF55874 363 538 5.37E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 Pfam PF00072 Response regulator receiver domain 559 669 1.9E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 PANTHER PTHR24423:SF438 127 279 7.2E-173 T 23-04-2016 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 PANTHER PTHR24423:SF438 47 58 7.2E-173 T 23-04-2016 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 PANTHER PTHR24423:SF438 300 672 7.2E-173 T 23-04-2016 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 SMART SM00448 557 669 3.4E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 198 271 2.3E-7 T 23-04-2016 IPR000014 PAS domain LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 Pfam PF08447 PAS fold 172 257 1.9E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 SMART SM00388 304 372 9.9E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 SUPERFAMILY SSF47384 291 370 4.9E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 SMART SM00387 413 536 2.6E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 Gene3D G3DSA:3.30.450.20 137 286 1.6E-20 T 23-04-2016 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 Gene3D G3DSA:3.40.50.2300 20 136 8.7E-7 T 23-04-2016 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 Gene3D G3DSA:3.40.50.2300 555 673 5.7E-31 T 23-04-2016 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 SUPERFAMILY SSF52172 20 141 6.97E-6 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 Gene3D G3DSA:1.10.287.130 297 368 1.6E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 PANTHER PTHR24423 127 279 7.2E-173 T 23-04-2016 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 PANTHER PTHR24423 47 58 7.2E-173 T 23-04-2016 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 PANTHER PTHR24423 300 672 7.2E-173 T 23-04-2016 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 514 2.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 533 2.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 479 2.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 493 2.7E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 Gene3D G3DSA:3.30.565.10 372 533 7.0E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 SMART SM00086 222 264 6.3E-7 T 23-04-2016 IPR001610 PAC motif LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 SUPERFAMILY SSF52172 556 672 5.69E-28 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 SUPERFAMILY SSF55785 163 273 1.18E-17 T 23-04-2016 IPR000014 PAS domain LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 Pfam PF00512 His Kinase A (phospho-acceptor) domain 305 371 1.0E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10150 f5b150f036924defc6c30a41c530f9dc 675 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 414 533 2.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 288 5.2E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 SUPERFAMILY SSF51905 155 313 6.79E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 5.9E-15 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 5.9E-15 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 5.9E-15 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 5.9E-15 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 SUPERFAMILY SSF55124 522 646 1.01E-23 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 Gene3D G3DSA:3.30.413.10 637 775 1.9E-34 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 637 773 1.2E-20 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 684 700 - T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 13 806 0.0 T 23-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 SUPERFAMILY SSF51905 10 196 4.73E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PANTHER PTHR11493 423 839 4.3E-276 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PANTHER PTHR11493 8 261 4.3E-276 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 Pfam PF04324 BFD-like [2Fe-2S] binding domain 427 475 3.2E-7 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PIRSF PIRSF037149 6 840 0.0 T 23-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 SUPERFAMILY SSF56014 638 813 3.53E-51 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PRINTS PR00397 Sirohaem Fe-binding site signature 641 659 6.5E-7 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PRINTS PR00397 Sirohaem Fe-binding site signature 684 702 6.5E-7 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 Gene3D G3DSA:3.50.50.60 10 113 2.1E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 4.4E-10 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 281 288 4.4E-10 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 4.4E-10 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 240 254 4.4E-10 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 565 627 3.2E-11 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 Gene3D G3DSA:3.50.50.60 114 313 1.2E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PANTHER PTHR11493:SF52 423 839 4.3E-276 T 23-04-2016 LT40_RS05680 7cde7d308591155b1ef521a0d955a2d9 853 PANTHER PTHR11493:SF52 8 261 4.3E-276 T 23-04-2016 LT40_RS17095 8729364f3b0338683ec61d85d31f0698 302 Gene3D G3DSA:2.120.10.30 70 291 2.4E-12 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS17095 8729364f3b0338683ec61d85d31f0698 302 Pfam PF06977 SdiA-regulated 51 300 2.6E-101 T 23-04-2016 IPR009722 SdiA-regulated LT40_RS17095 8729364f3b0338683ec61d85d31f0698 302 SUPERFAMILY SSF50956 13 302 7.85E-47 T 23-04-2016 LT40_RS18890 e1c983a19f14f57da3acfdd7ebf88895 166 SUPERFAMILY SSF55486 16 151 5.31E-46 T 23-04-2016 LT40_RS18890 e1c983a19f14f57da3acfdd7ebf88895 166 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 36 142 3.2E-36 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LT40_RS18890 e1c983a19f14f57da3acfdd7ebf88895 166 Pfam PF02130 Uncharacterized protein family UPF0054 18 141 4.7E-38 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LT40_RS18890 e1c983a19f14f57da3acfdd7ebf88895 166 Gene3D G3DSA:3.40.390.30 12 150 1.0E-50 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 LT40_RS18890 e1c983a19f14f57da3acfdd7ebf88895 166 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 111 121 - T 23-04-2016 IPR020549 Endoribonuclease YbeY, conserved site LT40_RS18890 e1c983a19f14f57da3acfdd7ebf88895 166 PANTHER PTHR22881 1 151 1.0E-54 T 23-04-2016 LT40_RS18890 e1c983a19f14f57da3acfdd7ebf88895 166 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 145 23.814 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LT40_RS03065 a52a74f57594c722bb3b1f82200ca483 218 SUPERFAMILY SSF53474 10 217 6.79E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS03065 a52a74f57594c722bb3b1f82200ca483 218 Gene3D G3DSA:3.40.50.1820 4 217 1.0E-63 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS03065 a52a74f57594c722bb3b1f82200ca483 218 PANTHER PTHR10655:SF17 1 216 7.9E-56 T 23-04-2016 LT40_RS03065 a52a74f57594c722bb3b1f82200ca483 218 Pfam PF02230 Phospholipase/Carboxylesterase 3 214 4.6E-42 T 23-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 LT40_RS03065 a52a74f57594c722bb3b1f82200ca483 218 PANTHER PTHR10655 1 216 7.9E-56 T 23-04-2016 LT40_RS05580 6f31ad82b9eb92081a7acffb169c2bfa 252 Gene3D G3DSA:3.40.50.150 35 250 1.1E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS05580 6f31ad82b9eb92081a7acffb169c2bfa 252 PANTHER PTHR10108 8 247 8.7E-95 T 23-04-2016 LT40_RS05580 6f31ad82b9eb92081a7acffb169c2bfa 252 PANTHER PTHR10108:SF835 8 247 8.7E-95 T 23-04-2016 LT40_RS05580 6f31ad82b9eb92081a7acffb169c2bfa 252 Pfam PF08241 Methyltransferase domain 47 143 6.7E-25 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LT40_RS05580 6f31ad82b9eb92081a7acffb169c2bfa 252 SUPERFAMILY SSF53335 9 238 6.69E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS10425 e7a105ed785636d41ce4cfbf69a7e760 410 PANTHER PTHR34596 25 410 3.7E-127 T 23-04-2016 LT40_RS10425 e7a105ed785636d41ce4cfbf69a7e760 410 Pfam PF03573 outer membrane porin, OprD family 25 409 1.1E-132 T 23-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 LT40_RS10425 e7a105ed785636d41ce4cfbf69a7e760 410 Gene3D G3DSA:2.40.160.10 28 410 1.9E-130 T 23-04-2016 IPR023614 Porin domain LT40_RS03615 4d1af8a43d55e5c15a878875b09a0386 531 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 74 96 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site LT40_RS03615 4d1af8a43d55e5c15a878875b09a0386 531 SUPERFAMILY SSF53850 26 528 5.93E-141 T 23-04-2016 LT40_RS03615 4d1af8a43d55e5c15a878875b09a0386 531 Gene3D G3DSA:3.10.105.10 285 501 9.0E-61 T 23-04-2016 LT40_RS03615 4d1af8a43d55e5c15a878875b09a0386 531 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 449 1.1E-92 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS03615 4d1af8a43d55e5c15a878875b09a0386 531 PANTHER PTHR30290:SF14 24 531 2.0E-190 T 23-04-2016 LT40_RS03615 4d1af8a43d55e5c15a878875b09a0386 531 PANTHER PTHR30290 24 531 2.0E-190 T 23-04-2016 LT40_RS03615 4d1af8a43d55e5c15a878875b09a0386 531 Gene3D G3DSA:3.90.76.10 34 213 3.9E-46 T 23-04-2016 LT40_RS03615 4d1af8a43d55e5c15a878875b09a0386 531 PIRSF PIRSF002741 20 530 6.4E-104 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS00330 d3d5e96b63a0b0c0dc4a7ef951de3a13 149 PIRSF PIRSF006173 1 149 7.4E-65 T 23-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 LT40_RS00330 d3d5e96b63a0b0c0dc4a7ef951de3a13 149 PANTHER PTHR37421:SF1 2 147 3.5E-61 T 23-04-2016 LT40_RS00330 d3d5e96b63a0b0c0dc4a7ef951de3a13 149 PANTHER PTHR37421 2 147 3.5E-61 T 23-04-2016 LT40_RS00330 d3d5e96b63a0b0c0dc4a7ef951de3a13 149 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 4 149 40.067 T 23-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 LT40_RS00330 d3d5e96b63a0b0c0dc4a7ef951de3a13 149 Pfam PF03692 Putative zinc- or iron-chelating domain 26 93 7.2E-9 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein LT40_RS00995 c8f493ac0ca039c4c5f9c1005290e191 501 Pfam PF00156 Phosphoribosyl transferase domain 276 393 6.7E-9 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LT40_RS00995 c8f493ac0ca039c4c5f9c1005290e191 501 SUPERFAMILY SSF56235 2 257 2.14E-69 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS00995 c8f493ac0ca039c4c5f9c1005290e191 501 PANTHER PTHR11907 1 478 3.1E-270 T 23-04-2016 LT40_RS00995 c8f493ac0ca039c4c5f9c1005290e191 501 SUPERFAMILY SSF53271 250 483 2.23E-71 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS00995 c8f493ac0ca039c4c5f9c1005290e191 501 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.118 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 LT40_RS00995 c8f493ac0ca039c4c5f9c1005290e191 501 PIRSF PIRSF000485 1 481 4.2E-159 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 LT40_RS00995 c8f493ac0ca039c4c5f9c1005290e191 501 PANTHER PTHR11907:SF4 1 478 3.1E-270 T 23-04-2016 LT40_RS00995 c8f493ac0ca039c4c5f9c1005290e191 501 Pfam PF13522 Glutamine amidotransferase domain 65 208 8.4E-15 T 23-04-2016 LT40_RS00995 c8f493ac0ca039c4c5f9c1005290e191 501 Gene3D G3DSA:3.60.20.10 2 257 1.5E-62 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS00995 c8f493ac0ca039c4c5f9c1005290e191 501 Gene3D G3DSA:3.40.50.2020 271 444 8.8E-46 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS00995 c8f493ac0ca039c4c5f9c1005290e191 501 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 1.8E-160 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 24.883 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 5.4E-68 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 SUPERFAMILY SSF82679 3 114 1.57E-39 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 3.0E-20 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 3.0E-20 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 3.0E-20 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 SUPERFAMILY SSF50104 121 177 2.06E-19 T 23-04-2016 IPR008991 Translation protein SH3-like domain LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 Pfam PF00467 KOW motif 126 156 7.1E-9 T 23-04-2016 IPR005824 KOW LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 Gene3D G3DSA:2.30.30.30 116 177 4.6E-31 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 SMART SM00739 123 150 6.9E-7 T 23-04-2016 IPR005824 KOW LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 PANTHER PTHR30265 1 177 5.4E-83 T 23-04-2016 LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 SMART SM00738 2 111 1.1E-48 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 Gene3D G3DSA:3.30.70.940 3 113 3.3E-44 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 LT40_RS18295 8ff42d0b52df37da3bca814297ff628d 177 Pfam PF02357 Transcription termination factor nusG 3 108 1.8E-28 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 Pfam PF13481 AAA domain 69 221 3.7E-14 T 23-04-2016 LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 Gene3D G3DSA:3.30.230.10 283 455 7.5E-38 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 SMART SM00382 90 243 5.3E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 PANTHER PTHR32472 1 455 3.6E-218 T 23-04-2016 LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 PRINTS PR01874 DNA repair protein radA signature 173 197 3.9E-94 T 23-04-2016 LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 PRINTS PR01874 DNA repair protein radA signature 212 240 3.9E-94 T 23-04-2016 LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 PRINTS PR01874 DNA repair protein radA signature 321 344 3.9E-94 T 23-04-2016 LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 PRINTS PR01874 DNA repair protein radA signature 10 34 3.9E-94 T 23-04-2016 LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 PRINTS PR01874 DNA repair protein radA signature 82 110 3.9E-94 T 23-04-2016 LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 PRINTS PR01874 DNA repair protein radA signature 247 273 3.9E-94 T 23-04-2016 LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 PRINTS PR01874 DNA repair protein radA signature 123 140 3.9E-94 T 23-04-2016 LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 SUPERFAMILY SSF54211 254 268 3.79E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 SUPERFAMILY SSF54211 302 454 3.79E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 450 4.3E-201 T 23-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 Gene3D G3DSA:3.40.50.300 58 276 1.2E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 SUPERFAMILY SSF52540 67 291 1.29E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19310 b24fcad555b6a4047f5df0dc7d817c2e 455 Pfam PF13541 Subunit ChlI of Mg-chelatase 363 429 3.6E-8 T 23-04-2016 LT40_RS18590 b1c78f08656814f8f79a2c91eeceb48b 166 PANTHER PTHR11078 24 157 9.4E-46 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 LT40_RS18590 b1c78f08656814f8f79a2c91eeceb48b 166 SUPERFAMILY SSF48013 26 157 3.66E-41 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LT40_RS18590 b1c78f08656814f8f79a2c91eeceb48b 166 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 26 157 22.242 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 LT40_RS18590 b1c78f08656814f8f79a2c91eeceb48b 166 Pfam PF01029 NusB family 30 153 1.6E-31 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LT40_RS18590 b1c78f08656814f8f79a2c91eeceb48b 166 Gene3D G3DSA:1.10.940.10 24 157 5.1E-42 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LT40_RS18590 b1c78f08656814f8f79a2c91eeceb48b 166 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 27 154 5.5E-42 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 Gene3D G3DSA:2.40.30.10 540 579 2.3E-8 T 23-04-2016 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 Gene3D G3DSA:2.40.30.10 641 706 2.3E-8 T 23-04-2016 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 776 792 1.1E-11 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 708 727 1.1E-11 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 569 579 1.1E-11 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 644 651 1.1E-11 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 799 807 1.1E-11 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 732 741 1.1E-11 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 Gene3D G3DSA:3.40.50.360 382 519 2.1E-36 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS19740 a5903609985f48410e585858835c5fd9 840 SUPERFAMILY SSF63380 531 699 1.86E-22 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 PANTHER PTHR19384 338 840 2.1E-90 T 23-04-2016 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 Gene3D G3DSA:3.40.50.80 707 839 4.0E-39 T 23-04-2016 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 Pfam PF00258 Flavodoxin 385 512 2.6E-24 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 Pfam PF03929 PepSY-associated TM region 7 360 1.1E-58 T 23-04-2016 IPR005625 PepSY-associated TM protein LT40_RS19740 a5903609985f48410e585858835c5fd9 840 Pfam PF00175 Oxidoreductase NAD-binding domain 709 814 1.2E-12 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 SUPERFAMILY SSF52218 383 519 1.26E-36 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS19740 a5903609985f48410e585858835c5fd9 840 PRINTS PR00369 Flavodoxin signature 463 473 3.5E-7 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 PRINTS PR00369 Flavodoxin signature 384 397 3.5E-7 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 PRINTS PR00369 Flavodoxin signature 487 506 3.5E-7 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 PRINTS PR00369 Flavodoxin signature 432 443 3.5E-7 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LT40_RS19740 a5903609985f48410e585858835c5fd9 840 SUPERFAMILY SSF52343 697 840 4.58E-37 T 23-04-2016 LT40_RS14570 680a7165f81060f25e9512dd27ace9d4 172 SUPERFAMILY SSF53271 12 154 7.6E-30 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS14570 680a7165f81060f25e9512dd27ace9d4 172 PANTHER PTHR11608 1 170 6.5E-62 T 23-04-2016 LT40_RS14570 680a7165f81060f25e9512dd27ace9d4 172 Pfam PF00156 Phosphoribosyl transferase domain 29 135 4.4E-13 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LT40_RS14570 680a7165f81060f25e9512dd27ace9d4 172 Gene3D G3DSA:3.40.50.2020 7 151 1.2E-32 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS08645 c62801b361719117d390b02bdb4cdb5c 216 SMART SM00530 6 60 6.7E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS08645 c62801b361719117d390b02bdb4cdb5c 216 Pfam PF01381 Helix-turn-helix 7 60 9.8E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS08645 c62801b361719117d390b02bdb4cdb5c 216 Pfam PF00717 Peptidase S24-like 129 197 1.3E-13 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B LT40_RS08645 c62801b361719117d390b02bdb4cdb5c 216 PANTHER PTHR33516 88 210 3.3E-37 T 23-04-2016 LT40_RS08645 c62801b361719117d390b02bdb4cdb5c 216 Gene3D G3DSA:1.10.260.40 5 65 5.1E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS08645 c62801b361719117d390b02bdb4cdb5c 216 Gene3D G3DSA:2.10.109.10 123 215 7.8E-30 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LT40_RS08645 c62801b361719117d390b02bdb4cdb5c 216 SUPERFAMILY SSF47413 4 60 3.33E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS08645 c62801b361719117d390b02bdb4cdb5c 216 SUPERFAMILY SSF51306 86 213 3.31E-25 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LT40_RS08645 c62801b361719117d390b02bdb4cdb5c 216 PANTHER PTHR33516:SF3 88 210 3.3E-37 T 23-04-2016 LT40_RS16895 b7b42bf71668aa40d9b290df79629b15 448 ProSitePatterns PS00942 glpT family of transporters signature. 154 170 - T 23-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 LT40_RS16895 b7b42bf71668aa40d9b290df79629b15 448 PIRSF PIRSF002808 5 448 1.1E-176 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LT40_RS16895 b7b42bf71668aa40d9b290df79629b15 448 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 436 3.5E-236 T 23-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 LT40_RS16895 b7b42bf71668aa40d9b290df79629b15 448 Gene3D G3DSA:1.20.1250.20 247 437 2.0E-45 T 23-04-2016 LT40_RS16895 b7b42bf71668aa40d9b290df79629b15 448 PANTHER PTHR11662 1 435 2.9E-235 T 23-04-2016 LT40_RS16895 b7b42bf71668aa40d9b290df79629b15 448 Pfam PF07690 Major Facilitator Superfamily 34 401 6.8E-50 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS16895 b7b42bf71668aa40d9b290df79629b15 448 PANTHER PTHR11662:SF141 1 435 2.9E-235 T 23-04-2016 LT40_RS16895 b7b42bf71668aa40d9b290df79629b15 448 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 418 4.0E-156 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LT40_RS16895 b7b42bf71668aa40d9b290df79629b15 448 Gene3D G3DSA:1.20.1250.20 23 225 2.1E-53 T 23-04-2016 LT40_RS16895 b7b42bf71668aa40d9b290df79629b15 448 SUPERFAMILY SSF103473 15 439 1.7E-86 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 SUPERFAMILY SSF51445 156 488 6.04E-132 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 SUPERFAMILY SSF51445 517 593 6.04E-132 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 26 114 5.7E-17 T 23-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 SUPERFAMILY SSF81296 22 167 2.41E-46 T 23-04-2016 IPR014756 Immunoglobulin E-set LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 PANTHER PTHR10357 12 596 0.0 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 PANTHER PTHR10357 625 709 0.0 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 PANTHER PTHR10357:SF74 12 596 0.0 T 23-04-2016 LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 PANTHER PTHR10357:SF74 625 709 0.0 T 23-04-2016 LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 22 713 0.0 T 23-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 Gene3D G3DSA:2.60.40.1180 606 713 2.1E-31 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 Gene3D G3DSA:2.60.40.10 22 172 2.3E-53 T 23-04-2016 IPR013783 Immunoglobulin-like fold LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 SMART SM00642 175 585 1.4E-8 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 Pfam PF00128 Alpha amylase, catalytic domain 209 546 1.7E-12 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 SUPERFAMILY SSF51011 606 713 1.22E-26 T 23-04-2016 LT40_RS11060 3e7c9a0b0888c9e7fe7b63ca6fc33751 720 Gene3D G3DSA:3.20.20.80 173 594 3.1E-122 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 SUPERFAMILY SSF81799 118 217 3.01E-34 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 Pfam PF01795 MraW methylase family 7 313 9.3E-110 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 PANTHER PTHR11265:SF0 9 315 1.2E-139 T 23-04-2016 LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 SUPERFAMILY SSF53335 8 117 1.36E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 SUPERFAMILY SSF53335 217 314 1.36E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 9 314 38.546 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 PANTHER PTHR11265 9 315 1.2E-139 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 PIRSF PIRSF004486 4 315 3.6E-100 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 Gene3D G3DSA:1.10.150.170 116 219 1.4E-35 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 7 313 1.9E-111 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 Gene3D G3DSA:3.40.50.150 9 114 1.6E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS04015 712e344b84a39e447cfad9f16e3eccaa 315 Gene3D G3DSA:3.40.50.150 220 314 1.6E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS11220 d89c4ee4bf766c8f93a286951d8bdb68 156 SUPERFAMILY SSF55729 15 142 4.39E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS11220 d89c4ee4bf766c8f93a286951d8bdb68 156 Pfam PF00583 Acetyltransferase (GNAT) family 38 125 7.6E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS11220 d89c4ee4bf766c8f93a286951d8bdb68 156 Gene3D G3DSA:3.40.630.30 12 140 1.1E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS11220 d89c4ee4bf766c8f93a286951d8bdb68 156 PANTHER PTHR13947 18 151 7.6E-18 T 23-04-2016 LT40_RS12940 2d6104449086fb0fc92e88c3f9042690 102 PANTHER PTHR40065 1 101 4.0E-22 T 23-04-2016 LT40_RS12940 2d6104449086fb0fc92e88c3f9042690 102 SUPERFAMILY SSF75471 1 96 1.44E-26 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LT40_RS12940 2d6104449086fb0fc92e88c3f9042690 102 Gene3D G3DSA:3.30.110.60 1 96 1.7E-26 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LT40_RS12940 2d6104449086fb0fc92e88c3f9042690 102 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 9.4E-17 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LT40_RS12940 2d6104449086fb0fc92e88c3f9042690 102 SMART SM01103 3 86 1.5E-35 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LT40_RS12940 2d6104449086fb0fc92e88c3f9042690 102 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 10 93 9.0E-39 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 LT40_RS12940 2d6104449086fb0fc92e88c3f9042690 102 PANTHER PTHR40065:SF1 1 101 4.0E-22 T 23-04-2016 LT40_RS07220 36a77b075c9504e3b42ef57e86d18187 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 8 194 20.984 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 LT40_RS07220 36a77b075c9504e3b42ef57e86d18187 194 Gene3D G3DSA:3.90.550.10 9 191 1.3E-42 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS07220 36a77b075c9504e3b42ef57e86d18187 194 SUPERFAMILY SSF53448 9 190 9.6E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS07220 36a77b075c9504e3b42ef57e86d18187 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 10 191 3.9E-55 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 LT40_RS07220 36a77b075c9504e3b42ef57e86d18187 194 PANTHER PTHR19136:SF81 1 192 2.4E-38 T 23-04-2016 LT40_RS07220 36a77b075c9504e3b42ef57e86d18187 194 PANTHER PTHR19136 1 192 2.4E-38 T 23-04-2016 LT40_RS07220 36a77b075c9504e3b42ef57e86d18187 194 Pfam PF12804 MobA-like NTP transferase domain 13 168 4.0E-29 T 23-04-2016 IPR025877 MobA-like NTP transferase LT40_RS14535 2480d0746cb569f92e3819258270c89c 179 Pfam PF01584 CheW-like domain 38 169 3.7E-26 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS14535 2480d0746cb569f92e3819258270c89c 179 Gene3D G3DSA:2.40.50.180 75 120 2.4E-7 T 23-04-2016 LT40_RS14535 2480d0746cb569f92e3819258270c89c 179 SUPERFAMILY SSF50341 29 170 3.27E-30 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS14535 2480d0746cb569f92e3819258270c89c 179 PANTHER PTHR22617 30 157 5.0E-25 T 23-04-2016 LT40_RS14535 2480d0746cb569f92e3819258270c89c 179 SMART SM00260 32 169 5.2E-18 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS04530 d7ac5466fba356cbe1f0d7e9a9007150 230 PANTHER PTHR21600:SF19 1 230 1.7E-64 T 23-04-2016 LT40_RS04530 d7ac5466fba356cbe1f0d7e9a9007150 230 Pfam PF00849 RNA pseudouridylate synthase 62 190 4.6E-14 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS04530 d7ac5466fba356cbe1f0d7e9a9007150 230 Pfam PF01479 S4 domain 1 42 3.3E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS04530 d7ac5466fba356cbe1f0d7e9a9007150 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LT40_RS04530 d7ac5466fba356cbe1f0d7e9a9007150 230 Gene3D G3DSA:3.10.290.10 1 63 1.2E-12 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS04530 d7ac5466fba356cbe1f0d7e9a9007150 230 SUPERFAMILY SSF55120 61 227 1.49E-41 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS04530 d7ac5466fba356cbe1f0d7e9a9007150 230 SUPERFAMILY SSF55174 1 88 6.41E-11 T 23-04-2016 LT40_RS04530 d7ac5466fba356cbe1f0d7e9a9007150 230 SMART SM00363 1 58 0.0018 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS04530 d7ac5466fba356cbe1f0d7e9a9007150 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 223 1.3E-41 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LT40_RS04530 d7ac5466fba356cbe1f0d7e9a9007150 230 PANTHER PTHR21600 1 230 1.7E-64 T 23-04-2016 LT40_RS14865 0ffcd9f328dd16eecd2d44ebe6519c24 205 Pfam PF03006 Haemolysin-III related 2 197 1.0E-42 T 23-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 LT40_RS14865 0ffcd9f328dd16eecd2d44ebe6519c24 205 PANTHER PTHR20855 3 205 5.0E-61 T 23-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 LT40_RS14865 0ffcd9f328dd16eecd2d44ebe6519c24 205 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 5 204 5.2E-64 T 23-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 LT40_RS14865 0ffcd9f328dd16eecd2d44ebe6519c24 205 PANTHER PTHR20855:SF3 3 205 5.0E-61 T 23-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 LT40_RS14370 f005ff98407a7f8fc9d6aca26764d263 581 Gene3D G3DSA:2.60.40.10 414 510 2.2E-30 T 23-04-2016 IPR013783 Immunoglobulin-like fold LT40_RS14370 f005ff98407a7f8fc9d6aca26764d263 581 PANTHER PTHR30504 20 508 0.0 T 23-04-2016 LT40_RS14370 f005ff98407a7f8fc9d6aca26764d263 581 PIRSF PIRSF006281 1 581 7.2E-245 T 23-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 LT40_RS14370 f005ff98407a7f8fc9d6aca26764d263 581 Gene3D G3DSA:2.70.98.10 37 410 5.9E-172 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 LT40_RS14370 f005ff98407a7f8fc9d6aca26764d263 581 SUPERFAMILY SSF74650 38 409 4.08E-163 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LT40_RS14370 f005ff98407a7f8fc9d6aca26764d263 581 SUPERFAMILY SSF81296 412 510 2.94E-24 T 23-04-2016 IPR014756 Immunoglobulin E-set LT40_RS14370 f005ff98407a7f8fc9d6aca26764d263 581 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 20 579 62.778 T 23-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 LT40_RS14370 f005ff98407a7f8fc9d6aca26764d263 581 PANTHER PTHR30504:SF4 20 508 0.0 T 23-04-2016 LT40_RS14370 f005ff98407a7f8fc9d6aca26764d263 581 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 38 509 9.3E-189 T 23-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 LT40_RS05575 e166017b54b4a52f3331a8a13b89a979 213 Gene3D G3DSA:3.20.19.10 1 202 3.4E-50 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS05575 e166017b54b4a52f3331a8a13b89a979 213 PANTHER PTHR11670 1 208 1.0E-111 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05575 e166017b54b4a52f3331a8a13b89a979 213 Pfam PF00694 Aconitase C-terminal domain 1 132 7.6E-38 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05575 e166017b54b4a52f3331a8a13b89a979 213 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.197 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05575 e166017b54b4a52f3331a8a13b89a979 213 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 3.4E-88 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS05575 e166017b54b4a52f3331a8a13b89a979 213 SUPERFAMILY SSF52016 1 203 3.73E-62 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS05575 e166017b54b4a52f3331a8a13b89a979 213 PANTHER PTHR11670:SF27 1 208 1.0E-111 T 23-04-2016 LT40_RS14200 c00cd6e9398cb72debdab4e40c15434a 524 PANTHER PTHR35894 10 252 8.7E-15 T 23-04-2016 LT40_RS14200 c00cd6e9398cb72debdab4e40c15434a 524 Gene3D G3DSA:3.40.50.300 63 161 2.6E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14200 c00cd6e9398cb72debdab4e40c15434a 524 Pfam PF05036 Sporulation related domain 439 510 4.7E-10 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS14200 c00cd6e9398cb72debdab4e40c15434a 524 SUPERFAMILY SSF52540 20 245 6.07E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14200 c00cd6e9398cb72debdab4e40c15434a 524 Gene3D G3DSA:3.40.50.300 51 62 6.2E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14200 c00cd6e9398cb72debdab4e40c15434a 524 Gene3D G3DSA:3.40.50.300 162 198 6.2E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14200 c00cd6e9398cb72debdab4e40c15434a 524 Pfam PF13401 AAA domain 49 167 1.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 PANTHER PTHR18919:SF95 1 393 5.5E-232 T 23-04-2016 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 PANTHER PTHR18919 1 393 5.5E-232 T 23-04-2016 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.3E-104 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 SUPERFAMILY SSF53901 3 270 2.34E-89 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 Gene3D G3DSA:3.40.47.10 142 193 1.4E-67 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 Gene3D G3DSA:3.40.47.10 277 390 1.4E-67 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 5.0E-147 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 PIRSF PIRSF000429 1 393 5.2E-132 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 Pfam PF02803 Thiolase, C-terminal domain 271 390 5.6E-51 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 SUPERFAMILY SSF53901 272 390 2.22E-42 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 Gene3D G3DSA:3.40.47.10 3 123 4.7E-78 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS11240 b725a38204e7ec84b4a81fb59d3a7ee1 393 Gene3D G3DSA:3.40.47.10 194 276 4.7E-78 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 PANTHER PTHR35008:SF3 5 421 4.2E-227 T 23-04-2016 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 Pfam PF00034 Cytochrome c 318 402 5.6E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 Pfam PF00034 Cytochrome c 32 129 1.6E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 PRINTS PR00605 Class IC cytochrome C signature 377 399 8.0E-7 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 PRINTS PR00605 Class IC cytochrome C signature 324 335 8.0E-7 T 23-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 Gene3D G3DSA:1.10.760.10 318 424 7.7E-28 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 PANTHER PTHR35008 5 421 4.2E-227 T 23-04-2016 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 SUPERFAMILY SSF46626 176 289 2.06E-17 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 PIRSF PIRSF000018 2 434 4.8E-167 T 23-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 SUPERFAMILY SSF46626 20 155 4.11E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 SUPERFAMILY SSF46626 318 419 1.86E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 Gene3D G3DSA:1.10.760.10 28 129 2.7E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS15790 7d07e889b3fe2dcc22efbf000b818605 437 Gene3D G3DSA:1.10.760.10 177 289 1.4E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS13800 54f8727a38647be4cb4ea50f4d80a38e 394 Pfam PF12221 Bacterial membrane protein N terminal 1 49 1.1E-16 T 23-04-2016 IPR020980 Menbrane protein HflK, N-terminal LT40_RS13800 54f8727a38647be4cb4ea50f4d80a38e 394 PRINTS PR00721 Stomatin signature 139 160 2.1E-6 T 23-04-2016 IPR001972 Stomatin family GO:0016020 LT40_RS13800 54f8727a38647be4cb4ea50f4d80a38e 394 PRINTS PR00721 Stomatin signature 221 239 2.1E-6 T 23-04-2016 IPR001972 Stomatin family GO:0016020 LT40_RS13800 54f8727a38647be4cb4ea50f4d80a38e 394 PRINTS PR00721 Stomatin signature 92 114 2.1E-6 T 23-04-2016 IPR001972 Stomatin family GO:0016020 LT40_RS13800 54f8727a38647be4cb4ea50f4d80a38e 394 SMART SM00244 85 245 1.5E-30 T 23-04-2016 IPR001107 Band 7 domain LT40_RS13800 54f8727a38647be4cb4ea50f4d80a38e 394 PANTHER PTHR10264 2 391 2.1E-149 T 23-04-2016 IPR001972 Stomatin family GO:0016020 LT40_RS13800 54f8727a38647be4cb4ea50f4d80a38e 394 SUPERFAMILY SSF117892 117 250 1.44E-21 T 23-04-2016 IPR001107 Band 7 domain LT40_RS13800 54f8727a38647be4cb4ea50f4d80a38e 394 TIGRFAM TIGR01933 hflK: HflK protein 87 348 7.5E-114 T 23-04-2016 IPR010201 HflK GO:0016021 LT40_RS13800 54f8727a38647be4cb4ea50f4d80a38e 394 Pfam PF01145 SPFH domain / Band 7 family 89 261 1.3E-28 T 23-04-2016 IPR001107 Band 7 domain LT40_RS13800 54f8727a38647be4cb4ea50f4d80a38e 394 PANTHER PTHR10264:SF51 2 391 2.1E-149 T 23-04-2016 IPR010201 HflK GO:0016021 LT40_RS13800 54f8727a38647be4cb4ea50f4d80a38e 394 Gene3D G3DSA:1.20.5.620 266 296 3.8E-4 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain LT40_RS04555 d85d1b36cb7cc9cf9dd56f8ef11ca9df 504 PANTHER PTHR35342:SF4 2 504 2.5E-280 T 23-04-2016 LT40_RS04555 d85d1b36cb7cc9cf9dd56f8ef11ca9df 504 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 440 5.2E-138 T 23-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane LT40_RS04555 d85d1b36cb7cc9cf9dd56f8ef11ca9df 504 PANTHER PTHR35342 2 504 2.5E-280 T 23-04-2016 LT40_RS17405 bb6af08761f0ffff776d29f98f18fb07 442 PANTHER PTHR30624:SF8 1 435 1.6E-90 T 23-04-2016 LT40_RS17405 bb6af08761f0ffff776d29f98f18fb07 442 PANTHER PTHR30624 1 435 1.6E-90 T 23-04-2016 LT40_RS17405 bb6af08761f0ffff776d29f98f18fb07 442 SUPERFAMILY SSF111283 6 440 4.84E-65 T 23-04-2016 LT40_RS17405 bb6af08761f0ffff776d29f98f18fb07 442 Pfam PF01523 Putative modulator of DNA gyrase 28 298 5.6E-19 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS20550 65f3c842a3b60feb1b3545c647654358 289 PANTHER PTHR30348:SF3 9 281 1.4E-72 T 23-04-2016 LT40_RS20550 65f3c842a3b60feb1b3545c647654358 289 Pfam PF01904 Protein of unknown function DUF72 25 262 2.1E-53 T 23-04-2016 IPR002763 Protein of unknown function DUF72 LT40_RS20550 65f3c842a3b60feb1b3545c647654358 289 PANTHER PTHR30348 9 281 1.4E-72 T 23-04-2016 LT40_RS20550 65f3c842a3b60feb1b3545c647654358 289 SUPERFAMILY SSF117396 7 264 1.29E-66 T 23-04-2016 IPR002763 Protein of unknown function DUF72 LT40_RS20550 65f3c842a3b60feb1b3545c647654358 289 Gene3D G3DSA:3.20.20.410 7 272 2.2E-66 T 23-04-2016 IPR002763 Protein of unknown function DUF72 LT40_RS04340 fd0a97ce68dcb3ac21fe3b87b202ea3e 259 PANTHER PTHR13707 1 236 5.8E-113 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 LT40_RS04340 fd0a97ce68dcb3ac21fe3b87b202ea3e 259 Gene3D G3DSA:3.40.810.20 2 243 8.5E-92 T 23-04-2016 LT40_RS04340 fd0a97ce68dcb3ac21fe3b87b202ea3e 259 Pfam PF01144 Coenzyme A transferase 7 215 2.6E-47 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 LT40_RS04340 fd0a97ce68dcb3ac21fe3b87b202ea3e 259 PANTHER PTHR13707:SF35 1 236 5.8E-113 T 23-04-2016 LT40_RS04340 fd0a97ce68dcb3ac21fe3b87b202ea3e 259 SUPERFAMILY SSF100950 1 244 1.16E-72 T 23-04-2016 LT40_RS04340 fd0a97ce68dcb3ac21fe3b87b202ea3e 259 SMART SM00882 7 216 3.7E-39 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 LT40_RS00285 258fbca00d26e71d45686e120481d4dc 397 SUPERFAMILY SSF53822 35 393 9.06E-77 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS00285 258fbca00d26e71d45686e120481d4dc 397 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 77 95 7.3E-9 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS00285 258fbca00d26e71d45686e120481d4dc 397 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 36 52 7.3E-9 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS00285 258fbca00d26e71d45686e120481d4dc 397 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 58 74 7.3E-9 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS00285 258fbca00d26e71d45686e120481d4dc 397 Pfam PF13458 Periplasmic binding protein 35 364 4.6E-58 T 23-04-2016 IPR028081 Leucine-binding protein domain LT40_RS00285 258fbca00d26e71d45686e120481d4dc 397 Gene3D G3DSA:3.40.50.2300 35 235 2.8E-50 T 23-04-2016 LT40_RS00285 258fbca00d26e71d45686e120481d4dc 397 PANTHER PTHR30483:SF6 8 348 1.3E-55 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS00285 258fbca00d26e71d45686e120481d4dc 397 PANTHER PTHR30483 8 348 1.3E-55 T 23-04-2016 LT40_RS17895 ff94521880e1b7e7287d3b00314a7a63 412 Pfam PF13579 Glycosyl transferase 4-like domain 16 205 8.3E-15 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LT40_RS17895 ff94521880e1b7e7287d3b00314a7a63 412 SUPERFAMILY SSF53756 1 398 4.71E-68 T 23-04-2016 LT40_RS17895 ff94521880e1b7e7287d3b00314a7a63 412 Gene3D G3DSA:3.40.50.2000 224 372 1.8E-24 T 23-04-2016 LT40_RS17895 ff94521880e1b7e7287d3b00314a7a63 412 Pfam PF00534 Glycosyl transferases group 1 222 372 2.1E-29 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS17895 ff94521880e1b7e7287d3b00314a7a63 412 PANTHER PTHR12526 82 400 2.2E-52 T 23-04-2016 LT40_RS17895 ff94521880e1b7e7287d3b00314a7a63 412 PANTHER PTHR12526 1 62 2.2E-52 T 23-04-2016 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 Pfam PF14520 Helix-hairpin-helix domain 554 602 2.2E-12 T 23-04-2016 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 Pfam PF01541 GIY-YIG catalytic domain 19 93 1.6E-10 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 PANTHER PTHR30562:SF1 1 604 5.1E-265 T 23-04-2016 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 SUPERFAMILY SSF46600 189 242 8.11E-13 T 23-04-2016 IPR001943 UVR domain GO:0005515 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 383 538 2.0E-51 T 23-04-2016 IPR001162 UvrC family homology region LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 SUPERFAMILY SSF82771 17 100 7.59E-21 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 SUPERFAMILY SSF47781 518 605 7.94E-24 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 585 1.4E-184 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 SMART SM00465 17 98 4.7E-21 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 Gene3D G3DSA:3.40.1440.10 18 97 1.7E-7 T 23-04-2016 IPR027299 GIY-YIG domain LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 Gene3D G3DSA:1.10.150.20 551 605 4.2E-24 T 23-04-2016 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 Gene3D G3DSA:4.10.860.10 185 242 1.4E-18 T 23-04-2016 IPR001943 UVR domain GO:0005515 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 SMART SM00278 552 571 8.2 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 SMART SM00278 584 603 2.7 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 603 29.253 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 PANTHER PTHR30562 1 604 5.1E-265 T 23-04-2016 LT40_RS12220 3a79b8863c2f57d02830f39015757dea 607 Pfam PF02151 UvrB/uvrC motif 204 236 3.6E-7 T 23-04-2016 IPR001943 UVR domain GO:0005515 LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 3.0E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 3.0E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 3.0E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 PANTHER PTHR30154 1 155 2.0E-83 T 23-04-2016 LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 SMART SM00344 5 114 8.4E-41 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 SUPERFAMILY SSF54909 65 154 9.52E-21 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 Gene3D G3DSA:1.10.10.10 2 54 4.3E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 Pfam PF01037 Lrp/AsnC ligand binding domain 72 145 1.8E-20 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 Gene3D G3DSA:3.30.70.920 58 154 3.9E-30 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 SUPERFAMILY SSF46785 5 64 1.31E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 PANTHER PTHR30154:SF17 1 155 2.0E-83 T 23-04-2016 LT40_RS17140 bc65075ff00bcc53fdecaac304802333 156 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 1.3E-19 T 23-04-2016 LT40_RS01805 db9f41f3fa5f52b1b76a15a1d12011f2 473 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 90 271 5.5E-7 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS01805 db9f41f3fa5f52b1b76a15a1d12011f2 473 SUPERFAMILY SSF53955 303 455 1.35E-30 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS01805 db9f41f3fa5f52b1b76a15a1d12011f2 473 SMART SM00062 47 286 0.0051 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS01805 db9f41f3fa5f52b1b76a15a1d12011f2 473 PANTHER PTHR21666 287 467 3.2E-65 T 23-04-2016 LT40_RS01805 db9f41f3fa5f52b1b76a15a1d12011f2 473 Pfam PF01464 Transglycosylase SLT domain 311 418 7.3E-16 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 LT40_RS01805 db9f41f3fa5f52b1b76a15a1d12011f2 473 Gene3D G3DSA:3.40.190.10 21 175 1.1E-5 T 23-04-2016 LT40_RS01805 db9f41f3fa5f52b1b76a15a1d12011f2 473 Gene3D G3DSA:1.10.530.10 285 456 4.6E-37 T 23-04-2016 LT40_RS01805 db9f41f3fa5f52b1b76a15a1d12011f2 473 PANTHER PTHR21666:SF206 287 467 3.2E-65 T 23-04-2016 LT40_RS01805 db9f41f3fa5f52b1b76a15a1d12011f2 473 SUPERFAMILY SSF53850 47 278 3.17E-21 T 23-04-2016 LT40_RS18645 9b4fb1d404df1ee6cd4343947f6b9647 314 Pfam PF03466 LysR substrate binding domain 109 299 4.0E-24 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS18645 9b4fb1d404df1ee6cd4343947f6b9647 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.1E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS18645 9b4fb1d404df1ee6cd4343947f6b9647 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.1E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS18645 9b4fb1d404df1ee6cd4343947f6b9647 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.1E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS18645 9b4fb1d404df1ee6cd4343947f6b9647 314 PANTHER PTHR30537 3 310 1.1E-64 T 23-04-2016 LT40_RS18645 9b4fb1d404df1ee6cd4343947f6b9647 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 70 6.5E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS18645 9b4fb1d404df1ee6cd4343947f6b9647 314 Gene3D G3DSA:3.40.190.10 184 267 5.9E-14 T 23-04-2016 LT40_RS18645 9b4fb1d404df1ee6cd4343947f6b9647 314 SUPERFAMILY SSF53850 107 300 5.79E-30 T 23-04-2016 LT40_RS18645 9b4fb1d404df1ee6cd4343947f6b9647 314 Gene3D G3DSA:1.10.10.10 12 93 2.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18645 9b4fb1d404df1ee6cd4343947f6b9647 314 SUPERFAMILY SSF46785 7 87 3.23E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18645 9b4fb1d404df1ee6cd4343947f6b9647 314 Gene3D G3DSA:3.40.190.10 109 183 2.9E-14 T 23-04-2016 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 PIRSF PIRSF002162 1 177 8.5E-48 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 Gene3D G3DSA:3.90.930.12 2 82 9.8E-29 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.1E-34 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.1E-34 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.1E-34 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 Pfam PF00347 Ribosomal protein L6 12 82 6.1E-17 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 Pfam PF00347 Ribosomal protein L6 90 164 8.0E-20 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 SUPERFAMILY SSF56053 83 177 9.21E-37 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.4E-77 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 Gene3D G3DSA:3.90.930.12 83 177 6.8E-42 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 PANTHER PTHR11655:SF14 1 176 5.8E-91 T 23-04-2016 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 PANTHER PTHR11655 1 176 5.8E-91 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.424 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS18430 b0fba7364ed3268cc451156fb2690429 177 SUPERFAMILY SSF56053 1 82 1.7E-23 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 SUPERFAMILY SSF52172 8 164 5.12E-33 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 Pfam PF00072 Response regulator receiver domain 10 121 4.3E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 Gene3D G3DSA:3.40.50.2300 7 147 3.1E-31 T 23-04-2016 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 392 5.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 373 5.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 336 5.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 350 5.6E-16 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 Gene3D G3DSA:1.10.287.130 160 228 2.0E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 Pfam PF00512 His Kinase A (phospho-acceptor) domain 168 241 3.9E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 SMART SM00388 168 241 8.6E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 287 393 1.3E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 SUPERFAMILY SSF55874 230 393 2.9E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 SMART SM00448 7 121 2.9E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 PANTHER PTHR24423 147 393 3.5E-62 T 23-04-2016 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 PANTHER PTHR24423 3 16 3.5E-62 T 23-04-2016 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 SUPERFAMILY SSF47384 152 242 8.63E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 Gene3D G3DSA:3.30.565.10 229 393 6.0E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS09470 d72357aa7c74ec9f69e8ef9bea143f28 393 SMART SM00387 286 393 1.2E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05825 01b1b3eb8c126e9e0488a5c2cada1710 225 Gene3D G3DSA:1.10.3720.10 17 217 7.3E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05825 01b1b3eb8c126e9e0488a5c2cada1710 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 114 6.9E-30 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS05825 01b1b3eb8c126e9e0488a5c2cada1710 225 SUPERFAMILY SSF161098 18 213 6.15E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05825 01b1b3eb8c126e9e0488a5c2cada1710 225 PANTHER PTHR30614 1 224 3.8E-80 T 23-04-2016 LT40_RS05825 01b1b3eb8c126e9e0488a5c2cada1710 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 217 4.8E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15965 412c6810cb4998cd6f9a2499d91310b9 310 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 303 1.2E-94 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS15965 412c6810cb4998cd6f9a2499d91310b9 310 Pfam PF02911 Formyl transferase, C-terminal domain 203 298 9.3E-28 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS15965 412c6810cb4998cd6f9a2499d91310b9 310 SUPERFAMILY SSF53328 1 206 3.79E-68 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS15965 412c6810cb4998cd6f9a2499d91310b9 310 Gene3D G3DSA:3.40.50.170 1 204 9.9E-76 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS15965 412c6810cb4998cd6f9a2499d91310b9 310 Gene3D G3DSA:3.10.25.10 206 306 2.3E-32 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS15965 412c6810cb4998cd6f9a2499d91310b9 310 PANTHER PTHR11138 1 301 7.8E-117 T 23-04-2016 LT40_RS15965 412c6810cb4998cd6f9a2499d91310b9 310 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 132 155 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS15965 412c6810cb4998cd6f9a2499d91310b9 310 SUPERFAMILY SSF50486 204 303 7.46E-31 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 LT40_RS15965 412c6810cb4998cd6f9a2499d91310b9 310 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 301 36.946 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS15965 412c6810cb4998cd6f9a2499d91310b9 310 Pfam PF00551 Formyl transferase 1 180 1.7E-47 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 225 321 1.9E-20 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 SUPERFAMILY SSF56176 1 217 1.64E-63 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 217 9.9E-53 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 PANTHER PTHR11908:SF97 160 329 8.1E-151 T 23-04-2016 LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 PANTHER PTHR11908:SF97 1 117 8.1E-151 T 23-04-2016 LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 Gene3D G3DSA:3.30.390.50 222 325 4.1E-40 T 23-04-2016 LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 SMART SM01092 224 322 4.5E-32 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 Gene3D G3DSA:3.30.465.10 155 217 1.8E-36 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 Gene3D G3DSA:3.30.465.10 54 111 1.8E-36 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 SUPERFAMILY SSF55447 223 322 2.22E-29 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 Gene3D G3DSA:3.30.43.10 1 49 1.5E-20 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 PANTHER PTHR11908 160 329 8.1E-151 T 23-04-2016 LT40_RS19255 5b502ac30e79dee9f283e2a441e21115 329 PANTHER PTHR11908 1 117 8.1E-151 T 23-04-2016 LT40_RS05830 289d0b4e25c19242e42e9141357889e4 244 SMART SM00382 29 215 3.8E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS05830 289d0b4e25c19242e42e9141357889e4 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS05830 289d0b4e25c19242e42e9141357889e4 244 Gene3D G3DSA:3.40.50.300 3 240 5.7E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05830 289d0b4e25c19242e42e9141357889e4 244 PIRSF PIRSF039085 1 243 1.1E-110 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS05830 289d0b4e25c19242e42e9141357889e4 244 Pfam PF00005 ABC transporter 20 167 3.8E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS05830 289d0b4e25c19242e42e9141357889e4 244 PANTHER PTHR24220:SF474 6 244 1.3E-137 T 23-04-2016 LT40_RS05830 289d0b4e25c19242e42e9141357889e4 244 SUPERFAMILY SSF52540 4 237 2.18E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05830 289d0b4e25c19242e42e9141357889e4 244 PANTHER PTHR24220 6 244 1.3E-137 T 23-04-2016 LT40_RS06100 2a69773ca4032d72ef9ae82c5a6dd3d5 610 Gene3D G3DSA:3.40.50.300 374 604 2.5E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06100 2a69773ca4032d72ef9ae82c5a6dd3d5 610 PANTHER PTHR24221 20 607 0.0 T 23-04-2016 LT40_RS06100 2a69773ca4032d72ef9ae82c5a6dd3d5 610 PANTHER PTHR24221:SF233 20 607 0.0 T 23-04-2016 LT40_RS06100 2a69773ca4032d72ef9ae82c5a6dd3d5 610 SMART SM00382 398 589 1.1E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS06100 2a69773ca4032d72ef9ae82c5a6dd3d5 610 Gene3D G3DSA:1.20.1560.10 27 360 1.4E-51 T 23-04-2016 LT40_RS06100 2a69773ca4032d72ef9ae82c5a6dd3d5 610 Pfam PF00664 ABC transporter transmembrane region 93 327 1.1E-26 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS06100 2a69773ca4032d72ef9ae82c5a6dd3d5 610 SUPERFAMILY SSF90123 27 357 4.32E-53 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS06100 2a69773ca4032d72ef9ae82c5a6dd3d5 610 ProSitePatterns PS00211 ABC transporters family signature. 509 523 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS06100 2a69773ca4032d72ef9ae82c5a6dd3d5 610 Pfam PF00005 ABC transporter 389 537 7.0E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS06100 2a69773ca4032d72ef9ae82c5a6dd3d5 610 SUPERFAMILY SSF52540 370 605 1.26E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06895 d612dc91c4931eb08d45502cd56545b0 114 Gene3D G3DSA:1.20.120.160 9 107 6.4E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS06895 d612dc91c4931eb08d45502cd56545b0 114 Pfam PF01627 Hpt domain 27 103 8.1E-8 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS06895 d612dc91c4931eb08d45502cd56545b0 114 SUPERFAMILY SSF47226 8 95 9.32E-11 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS18845 dbe07a6d1f6b17e3896e7f39a561dbed 303 SUPERFAMILY SSF141986 143 294 3.27E-38 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain LT40_RS18845 dbe07a6d1f6b17e3896e7f39a561dbed 303 SUPERFAMILY SSF52317 1 156 8.7E-45 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS18845 dbe07a6d1f6b17e3896e7f39a561dbed 303 Pfam PF02016 LD-carboxypeptidase 13 288 9.9E-79 T 23-04-2016 IPR003507 Peptidase family S66 LT40_RS18845 dbe07a6d1f6b17e3896e7f39a561dbed 303 Gene3D G3DSA:3.40.50.10740 1 154 1.9E-51 T 23-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain LT40_RS18845 dbe07a6d1f6b17e3896e7f39a561dbed 303 Gene3D G3DSA:3.50.30.60 168 295 8.0E-39 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain LT40_RS18845 dbe07a6d1f6b17e3896e7f39a561dbed 303 PIRSF PIRSF028757 1 303 8.3E-84 T 23-04-2016 IPR003507 Peptidase family S66 LT40_RS18845 dbe07a6d1f6b17e3896e7f39a561dbed 303 PANTHER PTHR30237 1 301 2.7E-91 T 23-04-2016 LT40_RS18845 dbe07a6d1f6b17e3896e7f39a561dbed 303 PANTHER PTHR30237:SF2 1 301 2.7E-91 T 23-04-2016 LT40_RS12265 c609b915b0e13ce9bfcff08d89da7a53 409 SUPERFAMILY SSF111369 52 291 1.02E-67 T 23-04-2016 LT40_RS12265 c609b915b0e13ce9bfcff08d89da7a53 409 PANTHER PTHR30158 1 392 2.9E-188 T 23-04-2016 LT40_RS12265 c609b915b0e13ce9bfcff08d89da7a53 409 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 287 8.5E-17 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LT40_RS12265 c609b915b0e13ce9bfcff08d89da7a53 409 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 367 1.5E-79 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LT40_RS12265 c609b915b0e13ce9bfcff08d89da7a53 409 Gene3D G3DSA:2.40.50.100 171 203 2.7E-22 T 23-04-2016 LT40_RS12265 c609b915b0e13ce9bfcff08d89da7a53 409 Gene3D G3DSA:2.40.50.100 62 96 2.7E-22 T 23-04-2016 LT40_RS12265 c609b915b0e13ce9bfcff08d89da7a53 409 PANTHER PTHR30158:SF2 1 392 2.9E-188 T 23-04-2016 LT40_RS15050 6587c272324696548823d3fc33739605 806 Pfam PF00593 TonB dependent receptor 576 805 3.4E-30 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS15050 6587c272324696548823d3fc33739605 806 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 170 804 2.1E-101 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS15050 6587c272324696548823d3fc33739605 806 PANTHER PTHR32552 91 806 8.2E-159 T 23-04-2016 LT40_RS15050 6587c272324696548823d3fc33739605 806 Gene3D G3DSA:2.170.130.10 148 275 5.5E-31 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS15050 6587c272324696548823d3fc33739605 806 Gene3D G3DSA:2.40.170.20 284 806 5.0E-110 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS15050 6587c272324696548823d3fc33739605 806 PANTHER PTHR32552:SF37 91 806 8.2E-159 T 23-04-2016 LT40_RS15050 6587c272324696548823d3fc33739605 806 SUPERFAMILY SSF56935 162 806 4.97E-115 T 23-04-2016 LT40_RS15050 6587c272324696548823d3fc33739605 806 Pfam PF07715 TonB-dependent Receptor Plug Domain 168 266 5.1E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS15050 6587c272324696548823d3fc33739605 806 SMART SM00965 72 123 2.0E-9 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 LT40_RS13840 dcaa08b367e4a865bc6c2d5d9569b37c 356 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 195 206 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS13840 dcaa08b367e4a865bc6c2d5d9569b37c 356 Pfam PF08331 Domain of unknown function (DUF1730) 63 141 5.8E-23 T 23-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS13840 dcaa08b367e4a865bc6c2d5d9569b37c 356 SUPERFAMILY SSF46548 140 258 2.2E-17 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 LT40_RS13840 dcaa08b367e4a865bc6c2d5d9569b37c 356 PANTHER PTHR30002:SF4 3 356 2.9E-179 T 23-04-2016 LT40_RS13840 dcaa08b367e4a865bc6c2d5d9569b37c 356 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 15 350 7.9E-152 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS13840 dcaa08b367e4a865bc6c2d5d9569b37c 356 Gene3D G3DSA:3.30.70.20 192 259 1.9E-6 T 23-04-2016 LT40_RS13840 dcaa08b367e4a865bc6c2d5d9569b37c 356 Pfam PF13484 4Fe-4S double cluster binding domain 194 258 8.1E-20 T 23-04-2016 LT40_RS13840 dcaa08b367e4a865bc6c2d5d9569b37c 356 PANTHER PTHR30002 3 356 2.9E-179 T 23-04-2016 LT40_RS13840 dcaa08b367e4a865bc6c2d5d9569b37c 356 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 8 317 49.06 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS19335 2a872aedf31ad10c6279c1dbb310e114 65 Pfam PF04328 Protein of unknown function (DUF466) 5 65 2.8E-29 T 23-04-2016 IPR007423 Protein of unknown function DUF466 LT40_RS19335 2a872aedf31ad10c6279c1dbb310e114 65 PANTHER PTHR38453:SF2 1 65 4.8E-39 T 23-04-2016 LT40_RS19335 2a872aedf31ad10c6279c1dbb310e114 65 PANTHER PTHR38453 1 65 4.8E-39 T 23-04-2016 LT40_RS02560 0e1131e47ad6e152b8eb5aab26e14ffc 916 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 693 752 1.8E-7 T 23-04-2016 IPR007577 Glycosyltransferase, DXD sugar-binding motif LT40_RS02560 0e1131e47ad6e152b8eb5aab26e14ffc 916 SUPERFAMILY SSF53448 614 867 1.65E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS02580 fbefb35d8b21e94f3a8c811c1d7f57b9 222 PANTHER PTHR30070 1 221 7.4E-63 T 23-04-2016 LT40_RS02580 fbefb35d8b21e94f3a8c811c1d7f57b9 222 PIRSF PIRSF002764 1 221 1.6E-77 T 23-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria LT40_RS02580 fbefb35d8b21e94f3a8c811c1d7f57b9 222 PANTHER PTHR30070:SF1 1 221 7.4E-63 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02580 fbefb35d8b21e94f3a8c811c1d7f57b9 222 Pfam PF03379 CcmB protein 5 218 9.8E-81 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02580 fbefb35d8b21e94f3a8c811c1d7f57b9 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 7 217 4.1E-83 T 23-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria LT40_RS02580 fbefb35d8b21e94f3a8c811c1d7f57b9 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 28 49 3.5E-67 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02580 fbefb35d8b21e94f3a8c811c1d7f57b9 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 54 71 3.5E-67 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02580 fbefb35d8b21e94f3a8c811c1d7f57b9 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 102 120 3.5E-67 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02580 fbefb35d8b21e94f3a8c811c1d7f57b9 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 133 156 3.5E-67 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02580 fbefb35d8b21e94f3a8c811c1d7f57b9 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 194 217 3.5E-67 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS02580 fbefb35d8b21e94f3a8c811c1d7f57b9 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 77 100 3.5E-67 T 23-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 LT40_RS15940 0aca12f6b07efbdc75009ae67c4ebf20 324 Gene3D G3DSA:3.90.180.10 3 146 9.0E-45 T 23-04-2016 IPR011032 GroES-like LT40_RS15940 0aca12f6b07efbdc75009ae67c4ebf20 324 SUPERFAMILY SSF50129 10 142 2.52E-38 T 23-04-2016 IPR011032 GroES-like LT40_RS15940 0aca12f6b07efbdc75009ae67c4ebf20 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 2.8E-9 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LT40_RS15940 0aca12f6b07efbdc75009ae67c4ebf20 324 SMART SM00829 11 322 1.3E-30 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LT40_RS15940 0aca12f6b07efbdc75009ae67c4ebf20 324 PANTHER PTHR11695:SF605 16 324 2.4E-130 T 23-04-2016 LT40_RS15940 0aca12f6b07efbdc75009ae67c4ebf20 324 PANTHER PTHR11695 16 324 2.4E-130 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS15940 0aca12f6b07efbdc75009ae67c4ebf20 324 SUPERFAMILY SSF51735 113 266 7.52E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15940 0aca12f6b07efbdc75009ae67c4ebf20 324 Pfam PF00107 Zinc-binding dehydrogenase 152 257 1.1E-26 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LT40_RS15940 0aca12f6b07efbdc75009ae67c4ebf20 324 Gene3D G3DSA:3.40.50.720 147 256 1.7E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04040 52c1a5f8e09c75805f963ea25ca84790 360 PANTHER PTHR22926:SF5 2 360 5.9E-178 T 23-04-2016 LT40_RS04040 52c1a5f8e09c75805f963ea25ca84790 360 PANTHER PTHR22926 2 360 5.9E-178 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS04040 52c1a5f8e09c75805f963ea25ca84790 360 Pfam PF00953 Glycosyl transferase family 4 99 284 3.1E-34 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS04040 52c1a5f8e09c75805f963ea25ca84790 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 2.5E-5 T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS04040 52c1a5f8e09c75805f963ea25ca84790 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS04040 52c1a5f8e09c75805f963ea25ca84790 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS04040 52c1a5f8e09c75805f963ea25ca84790 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 24.299 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS04040 52c1a5f8e09c75805f963ea25ca84790 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 1.4E-137 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS17160 647591b04c31131f4818e4d76a6d5ee1 527 SUPERFAMILY SSF55931 6 515 1.11E-195 T 23-04-2016 LT40_RS17160 647591b04c31131f4818e4d76a6d5ee1 527 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 7 516 4.5E-227 T 23-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 LT40_RS17160 647591b04c31131f4818e4d76a6d5ee1 527 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 527 228.945 T 23-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 LT40_RS17160 647591b04c31131f4818e4d76a6d5ee1 527 PANTHER PTHR38761 2 526 1.3E-262 T 23-04-2016 LT40_RS17160 647591b04c31131f4818e4d76a6d5ee1 527 Pfam PF04262 Glutamate-cysteine ligase 10 378 3.3E-168 T 23-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 LT40_RS17175 eba9aa85ad3459e047b2a52ac8c647b0 246 SUPERFAMILY SSF52172 8 131 4.13E-39 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS17175 eba9aa85ad3459e047b2a52ac8c647b0 246 Gene3D G3DSA:1.10.10.10 139 241 2.1E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17175 eba9aa85ad3459e047b2a52ac8c647b0 246 Gene3D G3DSA:3.40.50.2300 11 130 3.5E-40 T 23-04-2016 LT40_RS17175 eba9aa85ad3459e047b2a52ac8c647b0 246 SMART SM00862 161 238 1.1E-23 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS17175 eba9aa85ad3459e047b2a52ac8c647b0 246 Pfam PF00072 Response regulator receiver domain 13 123 2.3E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS17175 eba9aa85ad3459e047b2a52ac8c647b0 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 238 1.1E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS17175 eba9aa85ad3459e047b2a52ac8c647b0 246 SUPERFAMILY SSF46894 138 240 2.18E-26 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS17175 eba9aa85ad3459e047b2a52ac8c647b0 246 SMART SM00448 11 122 3.0E-41 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS17175 eba9aa85ad3459e047b2a52ac8c647b0 246 PANTHER PTHR26402:SF292 11 241 5.4E-101 T 23-04-2016 LT40_RS17175 eba9aa85ad3459e047b2a52ac8c647b0 246 PANTHER PTHR26402 11 241 5.4E-101 T 23-04-2016 LT40_RS15945 7f7e5b85d95c34a7b9df0ca12b5f98eb 184 PANTHER PTHR17490:SF8 6 180 1.9E-84 T 23-04-2016 LT40_RS15945 7f7e5b85d95c34a7b9df0ca12b5f98eb 184 Gene3D G3DSA:3.90.870.10 4 184 1.0E-52 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LT40_RS15945 7f7e5b85d95c34a7b9df0ca12b5f98eb 184 SUPERFAMILY SSF55821 4 183 2.08E-50 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LT40_RS15945 7f7e5b85d95c34a7b9df0ca12b5f98eb 184 Pfam PF01300 Telomere recombination 14 183 1.2E-40 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 LT40_RS15945 7f7e5b85d95c34a7b9df0ca12b5f98eb 184 PANTHER PTHR17490 6 180 1.9E-84 T 23-04-2016 LT40_RS15945 7f7e5b85d95c34a7b9df0ca12b5f98eb 184 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 183 36.3 T 23-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 LT40_RS11180 9f5a7be0f93ff1e4752d67277c3e3140 187 SUPERFAMILY SSF52317 7 184 2.15E-43 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS11180 9f5a7be0f93ff1e4752d67277c3e3140 187 PANTHER PTHR11019:SF115 8 181 5.6E-58 T 23-04-2016 LT40_RS11180 9f5a7be0f93ff1e4752d67277c3e3140 187 Pfam PF01965 DJ-1/PfpI family 8 182 5.5E-44 T 23-04-2016 IPR002818 DJ-1/PfpI LT40_RS11180 9f5a7be0f93ff1e4752d67277c3e3140 187 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 11 185 1.7E-53 T 23-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 LT40_RS11180 9f5a7be0f93ff1e4752d67277c3e3140 187 PANTHER PTHR11019 8 181 5.6E-58 T 23-04-2016 LT40_RS11180 9f5a7be0f93ff1e4752d67277c3e3140 187 Gene3D G3DSA:3.40.50.880 3 185 1.3E-52 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 326 344 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 335 353 - T 23-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 SUPERFAMILY SSF51120 227 357 1.44E-22 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 PRINTS PR00313 NodO calcium binding signature 339 347 1.2E-8 T 23-04-2016 LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 PRINTS PR00313 NodO calcium binding signature 318 329 1.2E-8 T 23-04-2016 LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 PRINTS PR00313 NodO calcium binding signature 348 357 1.2E-8 T 23-04-2016 LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 PRINTS PR00313 NodO calcium binding signature 330 338 1.2E-8 T 23-04-2016 LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 SMART SM00235 57 192 1.5E-5 T 23-04-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 Gene3D G3DSA:3.40.390.10 70 222 4.2E-29 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 Gene3D G3DSA:2.150.10.10 226 403 3.1E-21 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 PANTHER PTHR36921 72 369 7.7E-14 T 23-04-2016 LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 Pfam PF13946 Domain of unknown function (DUF4214) 483 547 1.4E-13 T 23-04-2016 IPR025282 Domain of unknown function DUF4214 LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 Pfam PF13946 Domain of unknown function (DUF4214) 699 767 6.0E-16 T 23-04-2016 IPR025282 Domain of unknown function DUF4214 LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 Pfam PF08548 Peptidase M10 serralysin C terminal 225 363 1.0E-18 T 23-04-2016 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 LT40_RS12475 183a912a907a54211d8ebafad18b9adb 784 SUPERFAMILY SSF55486 68 220 6.19E-32 T 23-04-2016 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 1 258 51.198 T 23-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 Pfam PF08386 TAP-like protein 198 256 2.9E-6 T 23-04-2016 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 255 2.3E-118 T 23-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 Gene3D G3DSA:3.40.50.1820 10 256 1.8E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 PANTHER PTHR10992 159 257 6.9E-44 T 23-04-2016 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 PANTHER PTHR10992 10 136 6.9E-44 T 23-04-2016 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 2.0E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 2.0E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 2.0E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 2.0E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 PANTHER PTHR10992:SF818 159 257 6.9E-44 T 23-04-2016 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 PANTHER PTHR10992:SF818 10 136 6.9E-44 T 23-04-2016 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 Pfam PF00561 alpha/beta hydrolase fold 14 120 3.2E-19 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS19085 94eb9f7f04650507db8b237d70db9ad6 260 SUPERFAMILY SSF53474 3 256 2.78E-56 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS17675 a680e95716556882d9883430d94a92da 354 Gene3D G3DSA:3.40.50.2000 169 348 4.0E-45 T 23-04-2016 LT40_RS17675 a680e95716556882d9883430d94a92da 354 PANTHER PTHR30160:SF8 1 350 1.4E-147 T 23-04-2016 LT40_RS17675 a680e95716556882d9883430d94a92da 354 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 297 1.4E-113 T 23-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 LT40_RS17675 a680e95716556882d9883430d94a92da 354 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 314 2.6E-70 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 LT40_RS17675 a680e95716556882d9883430d94a92da 354 PANTHER PTHR30160 1 350 1.4E-147 T 23-04-2016 LT40_RS17675 a680e95716556882d9883430d94a92da 354 Gene3D G3DSA:3.40.50.2000 2 156 4.1E-35 T 23-04-2016 LT40_RS17675 a680e95716556882d9883430d94a92da 354 SUPERFAMILY SSF53756 2 347 1.73E-79 T 23-04-2016 LT40_RS06955 a0c1b78d5c362a4170354ba019325759 149 Gene3D G3DSA:3.30.530.20 3 141 1.1E-28 T 23-04-2016 IPR023393 START-like domain LT40_RS06955 a0c1b78d5c362a4170354ba019325759 149 PANTHER PTHR39332 9 145 7.6E-18 T 23-04-2016 LT40_RS06955 a0c1b78d5c362a4170354ba019325759 149 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 2 115 1.0E-18 T 23-04-2016 IPR019587 Polyketide cyclase/dehydrase LT40_RS06955 a0c1b78d5c362a4170354ba019325759 149 PANTHER PTHR39332:SF2 9 145 7.6E-18 T 23-04-2016 LT40_RS06955 a0c1b78d5c362a4170354ba019325759 149 SUPERFAMILY SSF55961 3 123 7.67E-24 T 23-04-2016 LT40_RS08525 d651c22db0046fc29c7f733a66801eb0 626 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 43 168 4.4E-31 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component LT40_RS08525 d651c22db0046fc29c7f733a66801eb0 626 PANTHER PTHR33362 61 625 1.5E-216 T 23-04-2016 LT40_RS08525 d651c22db0046fc29c7f733a66801eb0 626 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 210 621 1.2E-92 T 23-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit LT40_RS08525 d651c22db0046fc29c7f733a66801eb0 626 PANTHER PTHR33362:SF8 61 625 1.5E-216 T 23-04-2016 LT40_RS08525 d651c22db0046fc29c7f733a66801eb0 626 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 219 623 6.9E-86 T 23-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 LT40_RS11780 ff604e77a082b6ab6a64bc84fc92a748 339 SUPERFAMILY SSF51658 97 275 9.82E-9 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS11780 ff604e77a082b6ab6a64bc84fc92a748 339 PANTHER PTHR31290:SF6 289 335 2.8E-28 T 23-04-2016 LT40_RS11780 ff604e77a082b6ab6a64bc84fc92a748 339 PANTHER PTHR31290:SF6 28 269 2.8E-28 T 23-04-2016 LT40_RS11780 ff604e77a082b6ab6a64bc84fc92a748 339 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 36 337 2.4E-41 T 23-04-2016 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 LT40_RS11780 ff604e77a082b6ab6a64bc84fc92a748 339 PANTHER PTHR31290 289 335 2.8E-28 T 23-04-2016 LT40_RS11780 ff604e77a082b6ab6a64bc84fc92a748 339 PANTHER PTHR31290 28 269 2.8E-28 T 23-04-2016 LT40_RS11780 ff604e77a082b6ab6a64bc84fc92a748 339 Pfam PF03851 UV-endonuclease UvdE 32 268 3.2E-46 T 23-04-2016 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 LT40_RS01355 d5682e2ba80082fafba9f73205a92735 241 SUPERFAMILY SSF52317 3 204 6.21E-39 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS01355 d5682e2ba80082fafba9f73205a92735 241 Pfam PF00117 Glutamine amidotransferase class-I 88 191 6.9E-10 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LT40_RS01355 d5682e2ba80082fafba9f73205a92735 241 PANTHER PTHR11922:SF34 1 203 4.6E-37 T 23-04-2016 LT40_RS01355 d5682e2ba80082fafba9f73205a92735 241 Gene3D G3DSA:3.40.50.880 14 217 4.1E-41 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS01355 d5682e2ba80082fafba9f73205a92735 241 PANTHER PTHR11922 1 203 4.6E-37 T 23-04-2016 LT40_RS14640 7393cb4b609b8f83e799dc67eb55e4ae 240 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 52 239 2.1E-59 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 LT40_RS14640 7393cb4b609b8f83e799dc67eb55e4ae 240 SUPERFAMILY SSF53335 17 238 9.46E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14640 7393cb4b609b8f83e799dc67eb55e4ae 240 PANTHER PTHR23417 16 239 8.7E-75 T 23-04-2016 LT40_RS14640 7393cb4b609b8f83e799dc67eb55e4ae 240 Pfam PF02390 Putative methyltransferase 65 234 6.5E-54 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 LT40_RS14640 7393cb4b609b8f83e799dc67eb55e4ae 240 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 25 239 29.863 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 LT40_RS14640 7393cb4b609b8f83e799dc67eb55e4ae 240 PANTHER PTHR23417:SF14 16 239 8.7E-75 T 23-04-2016 LT40_RS14640 7393cb4b609b8f83e799dc67eb55e4ae 240 Gene3D G3DSA:3.40.50.150 61 209 5.9E-13 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14730 cd78513d09076e525c9187dc5882d830 398 SUPERFAMILY SSF53335 85 391 8.05E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14730 cd78513d09076e525c9187dc5882d830 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 176 345 1.2E-17 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 LT40_RS14730 cd78513d09076e525c9187dc5882d830 398 SUPERFAMILY SSF88697 4 73 3.23E-9 T 23-04-2016 IPR015947 PUA-like domain LT40_RS14730 cd78513d09076e525c9187dc5882d830 398 PANTHER PTHR11061 3 398 2.6E-101 T 23-04-2016 LT40_RS14730 cd78513d09076e525c9187dc5882d830 398 PANTHER PTHR11061:SF12 3 398 2.6E-101 T 23-04-2016 LT40_RS14730 cd78513d09076e525c9187dc5882d830 398 Gene3D G3DSA:3.30.750.80 78 180 5.3E-29 T 23-04-2016 LT40_RS14730 cd78513d09076e525c9187dc5882d830 398 Gene3D G3DSA:2.30.130.10 5 73 6.0E-11 T 23-04-2016 IPR015947 PUA-like domain LT40_RS14730 cd78513d09076e525c9187dc5882d830 398 Gene3D G3DSA:3.40.50.150 185 394 2.9E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS09035 bc06feb66d2271c5a069ec584657c2c1 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 99.86 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 LT40_RS09035 bc06feb66d2271c5a069ec584657c2c1 200 PANTHER PTHR30446 1 200 1.5E-109 T 23-04-2016 LT40_RS09035 bc06feb66d2271c5a069ec584657c2c1 200 SUPERFAMILY SSF111304 3 198 9.94E-69 T 23-04-2016 IPR023627 Recombination protein RecR LT40_RS09035 bc06feb66d2271c5a069ec584657c2c1 200 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 2.3E-72 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 LT40_RS09035 bc06feb66d2271c5a069ec584657c2c1 200 Pfam PF13662 Toprim domain 82 171 6.8E-24 T 23-04-2016 IPR006171 Toprim domain LT40_RS09035 bc06feb66d2271c5a069ec584657c2c1 200 PANTHER PTHR30446:SF0 1 200 1.5E-109 T 23-04-2016 LT40_RS09035 bc06feb66d2271c5a069ec584657c2c1 200 SMART SM00493 80 165 5.7E-14 T 23-04-2016 IPR006171 Toprim domain LT40_RS09035 bc06feb66d2271c5a069ec584657c2c1 200 Pfam PF02132 RecR protein 41 78 1.1E-16 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger LT40_RS09035 bc06feb66d2271c5a069ec584657c2c1 200 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 23-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 Gene3D G3DSA:3.40.50.300 193 386 1.1E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 Pfam PF00271 Helicase conserved C-terminal domain 519 592 4.3E-5 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 SUPERFAMILY SSF52540 167 384 4.91E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 Gene3D G3DSA:3.40.50.300 464 637 3.6E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 PANTHER PTHR30580 1 739 8.7E-265 T 23-04-2016 LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 Pfam PF00270 DEAD/DEAH box helicase 212 367 1.8E-15 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 SMART SM00490 496 593 3.1E-5 T 23-04-2016 IPR001650 Helicase, C-terminal LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 TIGRFAM TIGR00595 priA: primosomal protein N' 225 736 3.0E-184 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 SUPERFAMILY SSF52540 499 624 3.15E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 SUPERFAMILY SSF52540 414 438 3.15E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 738 24.763 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 LT40_RS14265 efe005e1551a1b9462c926dd8e8b8a1c 739 SMART SM00487 199 399 9.8E-22 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 3 447 1.8E-187 T 23-04-2016 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PANTHER PTHR22912 1 450 8.6E-217 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 441 3.7E-69 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 3.7E-69 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 3.7E-69 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.7E-69 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.7E-69 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 3.7E-69 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 3.7E-69 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 3.7E-69 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 3.7E-69 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 446 2.5E-36 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 SUPERFAMILY SSF55424 335 447 9.62E-38 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 317 1.9E-69 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 Gene3D G3DSA:3.30.390.30 337 450 3.3E-45 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 SUPERFAMILY SSF51905 1 361 3.35E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 3.9E-29 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 3.9E-29 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.9E-29 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 3.9E-29 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 3.9E-29 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 Gene3D G3DSA:3.50.50.60 134 325 1.6E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PIRSF PIRSF000350 1 444 1.8E-88 T 23-04-2016 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 Gene3D G3DSA:3.50.50.60 3 133 2.7E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09380 3417c4aa4c1aa0b0747d0b331b4cef40 452 PANTHER PTHR22912:SF106 1 450 8.6E-217 T 23-04-2016 LT40_RS13695 dc7a3b08cf9fd611dec939c2ffd48f01 149 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 26 146 8.0E-51 T 23-04-2016 LT40_RS13695 dc7a3b08cf9fd611dec939c2ffd48f01 149 SUPERFAMILY SSF49503 21 147 4.29E-45 T 23-04-2016 IPR008972 Cupredoxin LT40_RS13695 dc7a3b08cf9fd611dec939c2ffd48f01 149 PANTHER PTHR38439 4 149 3.4E-44 T 23-04-2016 LT40_RS13695 dc7a3b08cf9fd611dec939c2ffd48f01 149 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 21 147 2.9E-29 T 23-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 LT40_RS13695 dc7a3b08cf9fd611dec939c2ffd48f01 149 TIGRFAM TIGR02695 azurin: azurin 23 147 6.8E-59 T 23-04-2016 IPR014068 Azurin, proteobacteria LT40_RS13695 dc7a3b08cf9fd611dec939c2ffd48f01 149 Gene3D G3DSA:2.60.40.420 22 147 8.6E-52 T 23-04-2016 IPR008972 Cupredoxin LT40_RS13695 dc7a3b08cf9fd611dec939c2ffd48f01 149 PANTHER PTHR38439:SF2 4 149 3.4E-44 T 23-04-2016 LT40_RS13380 c881149acabca3f5b0f198c1ee10e021 187 Pfam PF13590 Domain of unknown function (DUF4136) 22 186 6.7E-29 T 23-04-2016 IPR025411 Domain of unknown function DUF4136 LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 PANTHER PTHR24423 16 290 3.5E-78 T 23-04-2016 LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 SUPERFAMILY SSF55874 114 285 3.41E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 SMART SM00387 171 283 3.1E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 Pfam PF00512 His Kinase A (phospho-acceptor) domain 58 125 8.4E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 Gene3D G3DSA:1.10.287.130 48 121 1.7E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 226 236 2.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 208 222 2.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 267 280 2.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 PRINTS PR00344 Bacterial sensor protein C-terminal signature 243 261 2.2E-17 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 SUPERFAMILY SSF47384 41 126 7.46E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 172 282 1.5E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 SMART SM00388 57 125 5.1E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS10095 0e4e791e9666dcbeae7d54e08214b16a 291 Gene3D G3DSA:3.30.565.10 126 287 1.6E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS07235 04d709ff8a345bf822ac619cd8d2594f 489 Gene3D G3DSA:3.90.550.10 3 279 1.0E-85 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS07235 04d709ff8a345bf822ac619cd8d2594f 489 PANTHER PTHR12526 158 297 1.6E-160 T 23-04-2016 LT40_RS07235 04d709ff8a345bf822ac619cd8d2594f 489 PANTHER PTHR12526 360 477 1.6E-160 T 23-04-2016 LT40_RS07235 04d709ff8a345bf822ac619cd8d2594f 489 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 477 2.3E-171 T 23-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 LT40_RS07235 04d709ff8a345bf822ac619cd8d2594f 489 SUPERFAMILY SSF51182 189 478 1.28E-78 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS07235 04d709ff8a345bf822ac619cd8d2594f 489 Gene3D G3DSA:2.60.120.10 365 480 8.7E-43 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS07235 04d709ff8a345bf822ac619cd8d2594f 489 PANTHER PTHR12526:SF357 158 297 1.6E-160 T 23-04-2016 LT40_RS07235 04d709ff8a345bf822ac619cd8d2594f 489 PANTHER PTHR12526:SF357 360 477 1.6E-160 T 23-04-2016 LT40_RS07235 04d709ff8a345bf822ac619cd8d2594f 489 Pfam PF00483 Nucleotidyl transferase 6 295 3.0E-56 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LT40_RS07235 04d709ff8a345bf822ac619cd8d2594f 489 Pfam PF01050 Mannose-6-phosphate isomerase 323 473 5.2E-64 T 23-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 LT40_RS07235 04d709ff8a345bf822ac619cd8d2594f 489 SUPERFAMILY SSF53448 5 288 1.22E-65 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS11830 83bb8775da89433c65ea3accf80528dc 330 PANTHER PTHR30465:SF0 7 327 2.0E-94 T 23-04-2016 LT40_RS11830 83bb8775da89433c65ea3accf80528dc 330 SUPERFAMILY SSF161098 116 309 1.9E-11 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11830 83bb8775da89433c65ea3accf80528dc 330 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 138 326 1.2E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11830 83bb8775da89433c65ea3accf80528dc 330 Gene3D G3DSA:1.10.3720.10 115 323 5.7E-10 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11830 83bb8775da89433c65ea3accf80528dc 330 PANTHER PTHR30465 7 327 2.0E-94 T 23-04-2016 LT40_RS20215 f9daf7cb1cf8e2f0e631e3b49b2e5e6d 402 Pfam PF13356 Domain of unknown function (DUF4102) 2 88 8.0E-16 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 LT40_RS20215 f9daf7cb1cf8e2f0e631e3b49b2e5e6d 402 PANTHER PTHR30629 1 391 9.9E-86 T 23-04-2016 LT40_RS20215 f9daf7cb1cf8e2f0e631e3b49b2e5e6d 402 Pfam PF00589 Phage integrase family 204 373 3.3E-20 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS20215 f9daf7cb1cf8e2f0e631e3b49b2e5e6d 402 Gene3D G3DSA:1.10.443.10 202 382 7.1E-27 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS20215 f9daf7cb1cf8e2f0e631e3b49b2e5e6d 402 Gene3D G3DSA:1.10.150.130 98 192 6.3E-21 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal LT40_RS20215 f9daf7cb1cf8e2f0e631e3b49b2e5e6d 402 PANTHER PTHR30629:SF2 1 391 9.9E-86 T 23-04-2016 LT40_RS20215 f9daf7cb1cf8e2f0e631e3b49b2e5e6d 402 SUPERFAMILY SSF56349 98 384 2.44E-59 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LT40_RS10115 8fb6539c9977eb55e37c3327bbc33f4a 283 Pfam PF01740 STAS domain 168 254 1.0E-8 T 23-04-2016 IPR002645 STAS domain LT40_RS10115 8fb6539c9977eb55e37c3327bbc33f4a 283 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 11 109 7.1E-21 T 23-04-2016 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain LT40_RS10115 8fb6539c9977eb55e37c3327bbc33f4a 283 SUPERFAMILY SSF52091 158 256 1.16E-17 T 23-04-2016 IPR002645 STAS domain LT40_RS10115 8fb6539c9977eb55e37c3327bbc33f4a 283 PANTHER PTHR33745:SF1 39 283 9.2E-63 T 23-04-2016 LT40_RS10115 8fb6539c9977eb55e37c3327bbc33f4a 283 Gene3D G3DSA:3.30.750.24 162 254 2.1E-14 T 23-04-2016 IPR002645 STAS domain LT40_RS10115 8fb6539c9977eb55e37c3327bbc33f4a 283 PANTHER PTHR33745 39 283 9.2E-63 T 23-04-2016 LT40_RS19500 119c214db92dc07445baf0f4175922d4 131 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 28 106 1.1E-14 T 23-04-2016 IPR031982 Type IV minor pilin ComP LT40_RS19500 119c214db92dc07445baf0f4175922d4 131 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.8E-11 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site LT40_RS19500 119c214db92dc07445baf0f4175922d4 131 Gene3D G3DSA:3.30.700.10 7 72 6.6E-18 T 23-04-2016 LT40_RS19500 119c214db92dc07445baf0f4175922d4 131 PANTHER PTHR30093:SF4 3 64 1.9E-17 T 23-04-2016 LT40_RS19500 119c214db92dc07445baf0f4175922d4 131 SUPERFAMILY SSF54523 7 116 1.41E-20 T 23-04-2016 LT40_RS19500 119c214db92dc07445baf0f4175922d4 131 PANTHER PTHR30093 3 64 1.9E-17 T 23-04-2016 LT40_RS19500 119c214db92dc07445baf0f4175922d4 131 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site LT40_RS19500 119c214db92dc07445baf0f4175922d4 131 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 26 9.8E-11 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 100 137 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 Pfam PF01546 Peptidase family M20/M25/M40 67 378 2.7E-33 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 PANTHER PTHR11014:SF80 1 384 9.1E-99 T 23-04-2016 LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 6 377 4.9E-123 T 23-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 Pfam PF07687 Peptidase dimerisation domain 171 279 3.3E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 SUPERFAMILY SSF53187 4 173 4.57E-56 T 23-04-2016 LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 SUPERFAMILY SSF53187 304 379 4.57E-56 T 23-04-2016 LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 PANTHER PTHR11014 1 384 9.1E-99 T 23-04-2016 LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 Gene3D G3DSA:3.40.630.10 323 379 4.1E-61 T 23-04-2016 LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 Gene3D G3DSA:3.40.630.10 3 182 4.1E-61 T 23-04-2016 LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 Gene3D G3DSA:3.30.70.360 183 279 1.7E-24 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS03465 73ebfbee8819ca45a8ac733843381470 384 SUPERFAMILY SSF55031 174 280 2.84E-21 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS03270 f2dd3eb9b0ce75548d8d374e3fc11ed0 221 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 49 58 - T 23-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 LT40_RS03270 f2dd3eb9b0ce75548d8d374e3fc11ed0 221 SUPERFAMILY SSF51569 16 219 3.3E-63 T 23-04-2016 LT40_RS03270 f2dd3eb9b0ce75548d8d374e3fc11ed0 221 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 20 218 5.2E-74 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LT40_RS03270 f2dd3eb9b0ce75548d8d374e3fc11ed0 221 PANTHER PTHR30246 8 221 1.1E-99 T 23-04-2016 LT40_RS03270 f2dd3eb9b0ce75548d8d374e3fc11ed0 221 Gene3D G3DSA:3.20.20.70 15 219 1.3E-68 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS03270 f2dd3eb9b0ce75548d8d374e3fc11ed0 221 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 137 150 - T 23-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LT40_RS03270 f2dd3eb9b0ce75548d8d374e3fc11ed0 221 PANTHER PTHR30246:SF0 8 221 1.1E-99 T 23-04-2016 LT40_RS03270 f2dd3eb9b0ce75548d8d374e3fc11ed0 221 Pfam PF01081 KDPG and KHG aldolase 18 212 2.0E-84 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 SUPERFAMILY SSF54292 6 84 4.59E-24 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 76 1.1E-14 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 SUPERFAMILY SSF52343 193 306 7.07E-18 T 23-04-2016 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 SUPERFAMILY SSF63380 93 186 2.33E-14 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 Gene3D G3DSA:3.10.20.30 4 86 3.4E-24 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 Gene3D G3DSA:3.40.50.80 187 305 1.4E-14 T 23-04-2016 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 Pfam PF00970 Oxidoreductase FAD-binding domain 105 180 6.8E-6 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 PANTHER PTHR19370 30 307 1.0E-44 T 23-04-2016 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 Pfam PF00175 Oxidoreductase NAD-binding domain 202 252 2.0E-4 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 Gene3D G3DSA:2.40.30.10 93 186 4.1E-15 T 23-04-2016 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 119 129 9.5E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 139 146 9.5E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 200 219 9.5E-5 T 23-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 LT40_RS04745 d6554abb028422bdfdb5e2886e1e9b6e 309 PANTHER PTHR19370:SF68 30 307 1.0E-44 T 23-04-2016 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 176 191 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PANTHER PTHR30587 19 249 6.0E-122 T 23-04-2016 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 197 218 2.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 68 88 2.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 176 196 2.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 88 107 2.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 49 68 2.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 221 246 2.1E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 Pfam PF00813 FliP family 51 243 1.5E-79 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 224 236 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 147 159 6.1E-24 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 107 119 6.1E-24 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 169 181 6.1E-24 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 237 247 6.1E-24 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 119 133 6.1E-24 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 47 56 6.1E-24 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 51 247 6.8E-88 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LT40_RS02470 337d5ff8e7fc73d2b2f0355aa6557bde 250 PANTHER PTHR30587:SF0 19 249 6.0E-122 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 23-04-2016 IPR025505 FHIPEP conserved site LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 PANTHER PTHR30161 3 708 0.0 T 23-04-2016 LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 PANTHER PTHR30161:SF1 3 708 0.0 T 23-04-2016 LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 8.0E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 8.0E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 8.0E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 8.0E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 8.0E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 8.0E-55 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 PIRSF PIRSF005419 5 708 3.9E-240 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 21 705 1.7E-256 T 23-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 LT40_RS02490 c14cef73401d390b895c0d0a2d9f35a4 709 Pfam PF00771 FHIPEP family 31 697 9.2E-261 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS19720 755bdcfab51d2b9b5cd3421cb519e4f3 331 Gene3D G3DSA:3.40.50.2300 61 165 1.4E-28 T 23-04-2016 LT40_RS19720 755bdcfab51d2b9b5cd3421cb519e4f3 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 3.8E-16 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS19720 755bdcfab51d2b9b5cd3421cb519e4f3 331 Gene3D G3DSA:3.40.50.2300 166 325 1.9E-30 T 23-04-2016 LT40_RS19720 755bdcfab51d2b9b5cd3421cb519e4f3 331 PANTHER PTHR30146:SF25 1 327 9.6E-150 T 23-04-2016 LT40_RS19720 755bdcfab51d2b9b5cd3421cb519e4f3 331 PANTHER PTHR30146 1 327 9.6E-150 T 23-04-2016 LT40_RS19720 755bdcfab51d2b9b5cd3421cb519e4f3 331 SMART SM00354 1 73 3.7E-24 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS19720 755bdcfab51d2b9b5cd3421cb519e4f3 331 Gene3D G3DSA:1.10.260.40 2 60 2.4E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS19720 755bdcfab51d2b9b5cd3421cb519e4f3 331 SUPERFAMILY SSF53822 61 314 4.71E-45 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS19720 755bdcfab51d2b9b5cd3421cb519e4f3 331 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 327 9.3E-134 T 23-04-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 LT40_RS19720 755bdcfab51d2b9b5cd3421cb519e4f3 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 208 5.1E-18 T 23-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain LT40_RS19720 755bdcfab51d2b9b5cd3421cb519e4f3 331 SUPERFAMILY SSF47413 2 58 9.85E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 PANTHER PTHR11918:SF43 1 442 3.8E-195 T 23-04-2016 LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 SUPERFAMILY SSF102114 125 375 8.11E-61 T 23-04-2016 LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.1E-27 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 438 2.1E-147 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 Pfam PF01938 TRAM domain 378 441 3.8E-18 T 23-04-2016 IPR002792 TRAM domain LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 5.9E-180 T 23-04-2016 LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 Gene3D G3DSA:3.80.30.20 146 380 1.2E-76 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 442 72.962 T 23-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 SMART SM00729 147 367 2.8E-55 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 Pfam PF04055 Radical SAM superfamily 151 325 3.3E-29 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS18900 2fe10d431f1b2facb3295065ef4a73f0 442 PANTHER PTHR11918 1 442 3.8E-195 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein LT40_RS09505 b0212c3cce483134c24ba6e6b97442b2 237 SUPERFAMILY SSF158682 88 235 3.79E-19 T 23-04-2016 IPR029024 TerB-like LT40_RS09505 b0212c3cce483134c24ba6e6b97442b2 237 Gene3D G3DSA:1.10.3680.10 88 236 4.4E-17 T 23-04-2016 IPR029024 TerB-like LT40_RS09505 b0212c3cce483134c24ba6e6b97442b2 237 Pfam PF04391 Protein of unknown function (DUF533) 58 234 3.3E-48 T 23-04-2016 IPR007486 Inner membrane protein YebE LT40_RS17480 eb14ad9a9ce02d1b3fa00621d6b50291 306 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 24 305 2.6E-127 T 23-04-2016 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 LT40_RS17480 eb14ad9a9ce02d1b3fa00621d6b50291 306 Gene3D G3DSA:3.40.190.100 118 237 4.9E-21 T 23-04-2016 LT40_RS17480 eb14ad9a9ce02d1b3fa00621d6b50291 306 PANTHER PTHR30177:SF6 21 289 9.6E-111 T 23-04-2016 LT40_RS17480 eb14ad9a9ce02d1b3fa00621d6b50291 306 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 284 4.2E-52 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LT40_RS17480 eb14ad9a9ce02d1b3fa00621d6b50291 306 SUPERFAMILY SSF53850 25 301 1.28E-73 T 23-04-2016 LT40_RS17480 eb14ad9a9ce02d1b3fa00621d6b50291 306 Gene3D G3DSA:3.40.190.10 238 301 3.1E-27 T 23-04-2016 LT40_RS17480 eb14ad9a9ce02d1b3fa00621d6b50291 306 Gene3D G3DSA:3.40.190.10 25 113 3.1E-27 T 23-04-2016 LT40_RS17480 eb14ad9a9ce02d1b3fa00621d6b50291 306 PANTHER PTHR30177 21 289 9.6E-111 T 23-04-2016 LT40_RS05665 11d6f5056fbf77d1a62953f82546fddf 161 PANTHER PTHR10681 31 147 2.5E-27 T 23-04-2016 LT40_RS05665 11d6f5056fbf77d1a62953f82546fddf 161 Gene3D G3DSA:3.40.30.10 11 156 1.4E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS05665 11d6f5056fbf77d1a62953f82546fddf 161 SUPERFAMILY SSF52833 12 156 1.33E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS05665 11d6f5056fbf77d1a62953f82546fddf 161 PANTHER PTHR10681:SF107 31 147 2.5E-27 T 23-04-2016 LT40_RS05665 11d6f5056fbf77d1a62953f82546fddf 161 ProSitePatterns PS00194 Thioredoxin family active site. 49 67 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 LT40_RS05665 11d6f5056fbf77d1a62953f82546fddf 161 Pfam PF00578 AhpC/TSA family 31 138 1.8E-19 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS05930 0d7b9701a22dca8a8ab2487dd3b2f0e0 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 8.0E-28 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal LT40_RS05930 0d7b9701a22dca8a8ab2487dd3b2f0e0 406 Gene3D G3DSA:3.40.47.10 261 404 5.5E-46 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS05930 0d7b9701a22dca8a8ab2487dd3b2f0e0 406 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site LT40_RS05930 0d7b9701a22dca8a8ab2487dd3b2f0e0 406 Gene3D G3DSA:3.40.47.10 6 257 9.1E-57 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS05930 0d7b9701a22dca8a8ab2487dd3b2f0e0 406 SUPERFAMILY SSF53901 213 403 5.38E-59 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS05930 0d7b9701a22dca8a8ab2487dd3b2f0e0 406 SMART SM00825 Beta-ketoacyl synthase 4 405 4.9E-14 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LT40_RS05930 0d7b9701a22dca8a8ab2487dd3b2f0e0 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 2.3E-44 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal LT40_RS05930 0d7b9701a22dca8a8ab2487dd3b2f0e0 406 PANTHER PTHR11712 1 403 1.2E-155 T 23-04-2016 LT40_RS05930 0d7b9701a22dca8a8ab2487dd3b2f0e0 406 SUPERFAMILY SSF53901 1 251 7.36E-61 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS10630 3a3f4855cc456f291c1d6ba15a1b7dae 293 PANTHER PTHR22981 39 202 4.3E-20 T 23-04-2016 LT40_RS10630 3a3f4855cc456f291c1d6ba15a1b7dae 293 Gene3D G3DSA:1.10.1040.10 173 272 1.5E-25 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS10630 3a3f4855cc456f291c1d6ba15a1b7dae 293 Gene3D G3DSA:3.40.50.720 1 172 2.7E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10630 3a3f4855cc456f291c1d6ba15a1b7dae 293 SUPERFAMILY SSF51735 1 161 2.74E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10630 3a3f4855cc456f291c1d6ba15a1b7dae 293 PANTHER PTHR22981:SF63 39 202 4.3E-20 T 23-04-2016 LT40_RS10630 3a3f4855cc456f291c1d6ba15a1b7dae 293 SUPERFAMILY SSF48179 166 276 5.7E-23 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS10630 3a3f4855cc456f291c1d6ba15a1b7dae 293 PIRSF PIRSF000103 1 289 8.4E-18 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 LT40_RS10630 3a3f4855cc456f291c1d6ba15a1b7dae 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 142 1.8E-8 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LT40_RS10630 3a3f4855cc456f291c1d6ba15a1b7dae 293 Pfam PF09130 Domain of unknown function (DUF1932) 195 261 2.4E-12 T 23-04-2016 IPR015814 Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 SUPERFAMILY SSF56601 317 339 8.94E-116 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 SUPERFAMILY SSF56601 368 755 8.94E-116 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 24 748 0.0 T 23-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 Pfam PF00912 Transglycosylase 166 335 4.9E-57 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 Gene3D G3DSA:3.40.710.10 338 750 3.8E-109 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 PIRSF PIRSF002799 1 774 0.0 T 23-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 PANTHER PTHR32282 149 748 2.0E-254 T 23-04-2016 LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 670 1.5E-15 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 Gene3D G3DSA:3.30.2060.10 67 154 2.1E-22 T 23-04-2016 LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 Gene3D G3DSA:1.20.5.100 11 51 3.9E-8 T 23-04-2016 LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 SUPERFAMILY SSF53955 161 357 2.28E-66 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 Gene3D G3DSA:1.10.3810.10 166 337 3.7E-65 T 23-04-2016 LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 PANTHER PTHR32282:SF11 149 748 2.0E-254 T 23-04-2016 LT40_RS12770 051fd65730e3bad6cdeb0d984a41cdb4 774 Pfam PF14814 Bifunctional transglycosylase second domain 69 152 2.5E-21 T 23-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS07560 e8585e21522422c29ffe525a6d81b337 109 SMART SM00418 22 100 2.9E-24 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS07560 e8585e21522422c29ffe525a6d81b337 109 PANTHER PTHR33154 3 106 6.2E-23 T 23-04-2016 LT40_RS07560 e8585e21522422c29ffe525a6d81b337 109 SUPERFAMILY SSF46785 19 103 4.23E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07560 e8585e21522422c29ffe525a6d81b337 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 1.7E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS07560 e8585e21522422c29ffe525a6d81b337 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 1.7E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS07560 e8585e21522422c29ffe525a6d81b337 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.7E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS07560 e8585e21522422c29ffe525a6d81b337 109 Gene3D G3DSA:1.10.10.10 13 104 2.1E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07560 e8585e21522422c29ffe525a6d81b337 109 Pfam PF01022 Bacterial regulatory protein, arsR family 30 75 5.3E-11 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS01345 800469a98bbd9b56eea710e7f8237d28 316 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 313 1.2E-97 T 23-04-2016 IPR007296 Domain of unknown function DUF403 LT40_RS01345 800469a98bbd9b56eea710e7f8237d28 316 PANTHER PTHR34595 1 315 1.5E-123 T 23-04-2016 LT40_RS00105 fc224ee359434958d7a513b891d3a0a0 141 Gene3D G3DSA:1.10.490.10 19 140 3.3E-30 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 LT40_RS00105 fc224ee359434958d7a513b891d3a0a0 141 SUPERFAMILY SSF46458 22 139 9.35E-26 T 23-04-2016 IPR009050 Globin-like LT40_RS00105 fc224ee359434958d7a513b891d3a0a0 141 PANTHER PTHR10681 23 135 6.3E-16 T 23-04-2016 LT40_RS00105 fc224ee359434958d7a513b891d3a0a0 141 PIRSF PIRSF002030 10 141 5.9E-34 T 23-04-2016 IPR016339 Truncated hemoglobin, group 1 LT40_RS00105 fc224ee359434958d7a513b891d3a0a0 141 Pfam PF01152 Bacterial-like globin 26 133 7.7E-11 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 LT40_RS19020 2df50bf7e2a452023f1295b1d2d9184a 360 SUPERFAMILY SSF54506 3 167 1.26E-64 T 23-04-2016 LT40_RS19020 2df50bf7e2a452023f1295b1d2d9184a 360 PANTHER PTHR30349 1 121 2.6E-51 T 23-04-2016 LT40_RS19020 2df50bf7e2a452023f1295b1d2d9184a 360 SUPERFAMILY SSF54506 170 354 2.98E-59 T 23-04-2016 LT40_RS19020 2df50bf7e2a452023f1295b1d2d9184a 360 PANTHER PTHR30349:SF39 1 121 2.6E-51 T 23-04-2016 LT40_RS19020 2df50bf7e2a452023f1295b1d2d9184a 360 Gene3D G3DSA:3.10.310.10 175 331 4.4E-55 T 23-04-2016 LT40_RS19020 2df50bf7e2a452023f1295b1d2d9184a 360 Gene3D G3DSA:3.10.310.10 3 174 2.3E-77 T 23-04-2016 LT40_RS19020 2df50bf7e2a452023f1295b1d2d9184a 360 Pfam PF04303 PrpF protein 3 353 3.7E-138 T 23-04-2016 IPR007400 PrpF protein LT40_RS10540 e855a995d3120011df170aedb04eb95f 514 Gene3D G3DSA:3.90.76.10 53 192 1.3E-31 T 23-04-2016 LT40_RS10540 e855a995d3120011df170aedb04eb95f 514 PANTHER PTHR30290 13 493 1.3E-82 T 23-04-2016 LT40_RS10540 e855a995d3120011df170aedb04eb95f 514 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 429 4.9E-63 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS10540 e855a995d3120011df170aedb04eb95f 514 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 30 9.0E-4 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LT40_RS10540 e855a995d3120011df170aedb04eb95f 514 Gene3D G3DSA:3.40.190.10 193 294 1.6E-22 T 23-04-2016 LT40_RS10540 e855a995d3120011df170aedb04eb95f 514 SUPERFAMILY SSF53850 35 509 3.08E-103 T 23-04-2016 LT40_RS10540 e855a995d3120011df170aedb04eb95f 514 Gene3D G3DSA:3.10.105.10 295 479 4.4E-36 T 23-04-2016 LT40_RS10540 e855a995d3120011df170aedb04eb95f 514 PIRSF PIRSF002741 1 512 9.1E-61 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS15090 e808999c327d306d7d1d6a6eb7f431af 133 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 3 127 1.2E-37 T 23-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system LT40_RS15090 e808999c327d306d7d1d6a6eb7f431af 133 SUPERFAMILY SSF143100 2 63 5.23E-13 T 23-04-2016 LT40_RS15090 e808999c327d306d7d1d6a6eb7f431af 133 PANTHER PTHR34873:SF2 1 131 1.1E-16 T 23-04-2016 LT40_RS15090 e808999c327d306d7d1d6a6eb7f431af 133 PANTHER PTHR34873 1 131 1.1E-16 T 23-04-2016 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 Gene3D G3DSA:1.10.287.180 3 75 1.3E-24 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 3 156 2.7E-77 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 SUPERFAMILY SSF46557 3 78 1.06E-26 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 PIRSF PIRSF006092 2 157 4.3E-44 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 3.1E-25 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 52.91 T 23-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 Gene3D G3DSA:3.10.50.30 76 156 7.0E-28 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 3.6E-23 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 SUPERFAMILY SSF54534 80 155 2.62E-21 T 23-04-2016 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 PANTHER PTHR30437:SF6 3 158 1.3E-84 T 23-04-2016 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 PANTHER PTHR30437 3 158 1.3E-84 T 23-04-2016 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 26.994 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 LT40_RS01810 fed032ca29776049ba5f4091272b56ef 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 405 3.5E-69 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 Pfam PF09334 tRNA synthetases class I (M) 39 171 5.6E-20 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 Gene3D G3DSA:3.40.50.620 5 222 1.0E-152 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 Gene3D G3DSA:3.40.50.620 430 580 1.0E-152 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 Gene3D G3DSA:3.40.50.620 626 655 1.0E-152 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 SUPERFAMILY SSF47323 670 866 2.8E-37 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 SUPERFAMILY SSF52374 5 226 1.57E-149 T 23-04-2016 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 SUPERFAMILY SSF52374 421 675 1.57E-149 T 23-04-2016 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PANTHER PTHR11946:SF7 244 581 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PANTHER PTHR11946:SF7 626 868 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PANTHER PTHR11946:SF7 1 206 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 867 23.469 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 Pfam PF08264 Anticodon-binding domain of tRNA 709 829 2.6E-17 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PANTHER PTHR11946 244 581 0.0 T 23-04-2016 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PANTHER PTHR11946 626 868 0.0 T 23-04-2016 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PANTHER PTHR11946 1 206 0.0 T 23-04-2016 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 867 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 615 660 1.5E-6 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 423 579 2.3E-7 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 Gene3D G3DSA:3.90.740.10 223 429 9.7E-54 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 531 553 3.4E-51 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 3.4E-51 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 564 574 3.4E-51 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 3.4E-51 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 3.4E-51 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 3.4E-51 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 492 510 3.4E-51 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 SUPERFAMILY SSF50677 226 419 6.59E-51 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 LT40_RS18865 ca8ef344198da7982dc978dc5f7f2c6d 868 Gene3D G3DSA:1.10.730.10 656 803 1.3E-44 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 PIRSF PIRSF038928 1 481 1.9E-226 T 23-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 PRINTS PR00067 Catalase signature 84 102 2.8E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 PRINTS PR00067 Catalase signature 21 44 2.8E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 PRINTS PR00067 Catalase signature 105 122 2.8E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 PRINTS PR00067 Catalase signature 321 347 2.8E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 PRINTS PR00067 Catalase signature 124 142 2.8E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 PRINTS PR00067 Catalase signature 289 316 2.8E-74 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 Pfam PF00199 Catalase 8 388 2.0E-194 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 SUPERFAMILY SSF56634 3 480 1.44E-215 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 Gene3D G3DSA:2.40.180.10 3 358 5.9E-183 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 23-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 Pfam PF06628 Catalase-related immune-responsive 418 477 8.1E-22 T 23-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 23-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 PANTHER PTHR11465 3 479 9.1E-305 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS18485 da90f973b6ab6d1e3aad6801d0424bc6 482 SMART SM01060 8 392 1.3E-289 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 PANTHER PTHR30154:SF0 3 160 1.1E-91 T 23-04-2016 LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 Pfam PF13404 AsnC-type helix-turn-helix domain 11 52 5.9E-20 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 PANTHER PTHR30154 3 160 1.1E-91 T 23-04-2016 LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 SMART SM00344 11 120 3.3E-49 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 1.4E-21 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 Gene3D G3DSA:3.30.70.920 64 160 1.5E-31 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 Gene3D G3DSA:1.10.10.10 12 63 1.9E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 SUPERFAMILY SSF46785 10 69 7.32E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 1.5E-20 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 1.5E-20 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 1.5E-20 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS16595 2ef44abbad97b2d65db02bc86a1fbe6d 162 SUPERFAMILY SSF54909 73 159 6.17E-21 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS20685 9463cea0a212bad7cfd4cfce1fcae8f2 244 Gene3D G3DSA:1.10.10.10 145 238 2.8E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS20685 9463cea0a212bad7cfd4cfce1fcae8f2 244 PANTHER PTHR26402 6 239 4.0E-72 T 23-04-2016 LT40_RS20685 9463cea0a212bad7cfd4cfce1fcae8f2 244 Gene3D G3DSA:3.40.50.2300 5 144 6.3E-39 T 23-04-2016 LT40_RS20685 9463cea0a212bad7cfd4cfce1fcae8f2 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 235 8.2E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS20685 9463cea0a212bad7cfd4cfce1fcae8f2 244 SUPERFAMILY SSF46894 142 236 8.79E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS20685 9463cea0a212bad7cfd4cfce1fcae8f2 244 PANTHER PTHR26402:SF292 6 239 4.0E-72 T 23-04-2016 LT40_RS20685 9463cea0a212bad7cfd4cfce1fcae8f2 244 SMART SM00448 6 116 1.0E-40 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20685 9463cea0a212bad7cfd4cfce1fcae8f2 244 Pfam PF00072 Response regulator receiver domain 9 116 1.1E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20685 9463cea0a212bad7cfd4cfce1fcae8f2 244 SUPERFAMILY SSF52172 3 128 1.42E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS20685 9463cea0a212bad7cfd4cfce1fcae8f2 244 SMART SM00862 159 235 7.7E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS18500 616cc45e0670893d5913a73beb5e9fab 464 Gene3D G3DSA:1.20.1250.20 213 396 3.7E-21 T 23-04-2016 LT40_RS18500 616cc45e0670893d5913a73beb5e9fab 464 Gene3D G3DSA:1.20.1250.20 20 197 3.6E-35 T 23-04-2016 LT40_RS18500 616cc45e0670893d5913a73beb5e9fab 464 PANTHER PTHR23510 13 404 2.6E-212 T 23-04-2016 LT40_RS18500 616cc45e0670893d5913a73beb5e9fab 464 SUPERFAMILY SSF103473 14 396 1.44E-65 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS18500 616cc45e0670893d5913a73beb5e9fab 464 Pfam PF07690 Major Facilitator Superfamily 20 355 1.1E-39 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS18500 616cc45e0670893d5913a73beb5e9fab 464 PANTHER PTHR23510:SF6 13 404 2.6E-212 T 23-04-2016 LT40_RS14780 5d4e5875d76e341b608bdd5566fb0413 157 Gene3D G3DSA:3.40.630.30 27 145 7.8E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS14780 5d4e5875d76e341b608bdd5566fb0413 157 SUPERFAMILY SSF55729 26 146 5.83E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS14780 5d4e5875d76e341b608bdd5566fb0413 157 Pfam PF00583 Acetyltransferase (GNAT) family 65 140 4.2E-9 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS10510 821adfe25256fcafe29846fa8a04b9bc 252 PANTHER PTHR10992:SF771 11 248 1.6E-47 T 23-04-2016 LT40_RS10510 821adfe25256fcafe29846fa8a04b9bc 252 Gene3D G3DSA:3.40.50.1820 9 247 1.8E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS10510 821adfe25256fcafe29846fa8a04b9bc 252 PANTHER PTHR10992 11 248 1.6E-47 T 23-04-2016 LT40_RS10510 821adfe25256fcafe29846fa8a04b9bc 252 Pfam PF12697 Alpha/beta hydrolase family 14 239 2.2E-19 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS10510 821adfe25256fcafe29846fa8a04b9bc 252 SUPERFAMILY SSF53474 6 247 2.26E-49 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS10510 821adfe25256fcafe29846fa8a04b9bc 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 93 1.1E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS10510 821adfe25256fcafe29846fa8a04b9bc 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 37 52 1.1E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS10510 821adfe25256fcafe29846fa8a04b9bc 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 1.1E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS10510 821adfe25256fcafe29846fa8a04b9bc 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 190 204 1.1E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS10440 6e3ab00b1b4deff02872cd65aa0f2d40 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 273 2.4E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10440 6e3ab00b1b4deff02872cd65aa0f2d40 277 SUPERFAMILY SSF161098 69 256 4.71E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10440 6e3ab00b1b4deff02872cd65aa0f2d40 277 Gene3D G3DSA:1.10.3720.10 65 272 2.3E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10440 6e3ab00b1b4deff02872cd65aa0f2d40 277 PANTHER PTHR30465 1 276 1.7E-99 T 23-04-2016 LT40_RS10440 6e3ab00b1b4deff02872cd65aa0f2d40 277 PANTHER PTHR30465:SF10 1 276 1.7E-99 T 23-04-2016 LT40_RS06990 13709f265f438a434b26212c856a726f 170 PANTHER PTHR13939 2 169 3.0E-46 T 23-04-2016 LT40_RS06990 13709f265f438a434b26212c856a726f 170 SUPERFAMILY SSF142433 3 160 9.02E-43 T 23-04-2016 IPR008136 CinA, C-terminal LT40_RS06990 13709f265f438a434b26212c856a726f 170 Pfam PF02464 Competence-damaged protein 10 158 2.1E-39 T 23-04-2016 IPR008136 CinA, C-terminal LT40_RS06990 13709f265f438a434b26212c856a726f 170 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 157 2.0E-32 T 23-04-2016 IPR008136 CinA, C-terminal LT40_RS06990 13709f265f438a434b26212c856a726f 170 Gene3D G3DSA:3.90.950.20 5 158 1.8E-41 T 23-04-2016 IPR008136 CinA, C-terminal LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 SMART SM00267 457 626 7.5E-52 T 23-04-2016 IPR000160 GGDEF domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 Gene3D G3DSA:3.20.20.450 640 889 6.9E-98 T 23-04-2016 IPR001633 EAL domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 SMART SM00065 191 340 1.8E-8 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 Gene3D G3DSA:3.30.450.40 164 339 3.8E-17 T 23-04-2016 IPR029016 GAF domain-like LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 Gene3D G3DSA:3.30.70.270 469 633 2.4E-46 T 23-04-2016 LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 Pfam PF00990 Diguanylate cyclase, GGDEF domain 468 621 1.4E-37 T 23-04-2016 IPR000160 GGDEF domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 463 1.2E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 464 625 1.3E-33 T 23-04-2016 IPR000160 GGDEF domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 SUPERFAMILY SSF141868 641 890 7.98E-89 T 23-04-2016 IPR001633 EAL domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 Pfam PF01590 GAF domain 192 330 5.0E-10 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 SUPERFAMILY SSF55785 349 455 4.19E-20 T 23-04-2016 IPR000014 PAS domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 Gene3D G3DSA:3.30.450.20 352 456 7.3E-19 T 23-04-2016 LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 Gene3D G3DSA:3.30.450.20 36 130 5.3E-4 T 23-04-2016 LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 SUPERFAMILY SSF55073 473 627 1.26E-40 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 Pfam PF00563 EAL domain 642 877 2.8E-73 T 23-04-2016 IPR001633 EAL domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 SMART SM00086 415 457 1.8E-4 T 23-04-2016 IPR001610 PAC motif LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 PANTHER PTHR33121:SF13 596 889 3.2E-84 T 23-04-2016 LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 SMART SM00052 636 882 1.7E-109 T 23-04-2016 IPR001633 EAL domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 SUPERFAMILY SSF55781 194 339 7.61E-18 T 23-04-2016 IPR029016 GAF domain-like LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 Pfam PF13426 PAS domain 354 456 1.1E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 SMART SM00091 14 87 49.0 T 23-04-2016 IPR000014 PAS domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 SMART SM00091 343 410 1.0E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS17650 d64e25931a9dcea1c51a4d326ffd1c3a 896 PANTHER PTHR33121 596 889 3.2E-84 T 23-04-2016 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 Pfam PF01676 Metalloenzyme superfamily 6 497 4.1E-79 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 Gene3D G3DSA:3.40.720.10 6 79 1.5E-87 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 Gene3D G3DSA:3.40.720.10 312 508 1.5E-87 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 PANTHER PTHR31637 1 511 7.6E-276 T 23-04-2016 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 SUPERFAMILY SSF64158 79 305 4.58E-81 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 296 8.0E-78 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 Gene3D G3DSA:3.40.1450.10 80 306 4.6E-91 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 508 9.5E-229 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 PANTHER PTHR31637:SF0 1 511 7.6E-276 T 23-04-2016 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 509 49.77 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 SUPERFAMILY SSF53649 5 79 4.19E-77 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 SUPERFAMILY SSF53649 308 508 4.19E-77 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LT40_RS14495 70c57d880de4bca40ac391103d552a24 511 PIRSF PIRSF001492 1 510 8.3E-201 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 PANTHER PTHR10799 24 302 1.9E-26 T 23-04-2016 LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 SMART SM00086 90 133 0.002 T 23-04-2016 IPR001610 PAC motif LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 PANTHER PTHR10799:SF750 24 302 1.9E-26 T 23-04-2016 LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 301 9.5E-44 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 140 2.4E-12 T 23-04-2016 IPR000014 PAS domain LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 SMART SM00091 15 84 0.0059 T 23-04-2016 IPR000014 PAS domain LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 Gene3D G3DSA:3.30.450.20 9 131 1.9E-24 T 23-04-2016 LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 Gene3D G3DSA:3.30.70.270 146 303 2.0E-51 T 23-04-2016 LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 140 303 6.2E-46 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 SUPERFAMILY SSF55073 149 303 1.88E-45 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 Pfam PF08447 PAS fold 39 127 5.3E-23 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 SMART SM00267 133 305 2.8E-51 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15380 59e58bece6cefbfa0f2e107232ac5c2b 305 SUPERFAMILY SSF55785 25 132 2.44E-18 T 23-04-2016 IPR000014 PAS domain LT40_RS16790 ec4573b17349c826d3af8458848a35ec 418 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 397 2.4E-108 T 23-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 LT40_RS16790 ec4573b17349c826d3af8458848a35ec 418 SUPERFAMILY SSF48452 90 211 1.95E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS16790 ec4573b17349c826d3af8458848a35ec 418 Pfam PF07219 HemY protein N-terminus 27 133 1.4E-24 T 23-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 LT40_RS16790 ec4573b17349c826d3af8458848a35ec 418 Gene3D G3DSA:1.25.40.10 335 401 8.7E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS16790 ec4573b17349c826d3af8458848a35ec 418 Gene3D G3DSA:1.25.40.10 90 214 3.0E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS16790 ec4573b17349c826d3af8458848a35ec 418 Gene3D G3DSA:1.25.40.10 261 303 8.7E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 PANTHER PTHR30419 1 294 4.0E-130 T 23-04-2016 LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 PANTHER PTHR30419:SF0 1 294 4.0E-130 T 23-04-2016 LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.0E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 Gene3D G3DSA:3.40.190.10 178 267 7.6E-22 T 23-04-2016 LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 Gene3D G3DSA:3.40.190.10 91 177 7.4E-24 T 23-04-2016 LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 SUPERFAMILY SSF46785 4 112 1.23E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 Pfam PF03466 LysR substrate binding domain 90 294 2.0E-47 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.6E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.6E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.6E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 Gene3D G3DSA:1.10.10.10 4 89 2.8E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS19025 e08db25b9858d99544ae412e12749f15 296 SUPERFAMILY SSF53850 93 295 1.09E-47 T 23-04-2016 LT40_RS16020 857a68d1148dab4c769bf1762761f5c6 295 Pfam PF03466 LysR substrate binding domain 91 285 2.0E-32 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS16020 857a68d1148dab4c769bf1762761f5c6 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.0E-14 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16020 857a68d1148dab4c769bf1762761f5c6 295 Gene3D G3DSA:3.40.190.10 91 181 3.2E-15 T 23-04-2016 LT40_RS16020 857a68d1148dab4c769bf1762761f5c6 295 Gene3D G3DSA:1.10.10.10 1 85 5.9E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16020 857a68d1148dab4c769bf1762761f5c6 295 Gene3D G3DSA:3.40.190.10 182 254 1.9E-5 T 23-04-2016 LT40_RS16020 857a68d1148dab4c769bf1762761f5c6 295 PANTHER PTHR30126 1 293 1.4E-96 T 23-04-2016 LT40_RS16020 857a68d1148dab4c769bf1762761f5c6 295 PANTHER PTHR30126:SF12 1 293 1.4E-96 T 23-04-2016 LT40_RS16020 857a68d1148dab4c769bf1762761f5c6 295 SUPERFAMILY SSF53850 90 289 4.16E-34 T 23-04-2016 LT40_RS16020 857a68d1148dab4c769bf1762761f5c6 295 SUPERFAMILY SSF46785 1 111 2.45E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10325 21060a88035421a1b9273adc0f9c95c6 71 Gene3D G3DSA:2.40.50.100 6 69 2.0E-21 T 23-04-2016 LT40_RS10325 21060a88035421a1b9273adc0f9c95c6 71 SUPERFAMILY SSF50331 6 69 4.37E-16 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS10325 21060a88035421a1b9273adc0f9c95c6 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 7 69 1.6E-17 T 23-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 LT40_RS10325 21060a88035421a1b9273adc0f9c95c6 71 Pfam PF03459 TOBE domain 8 67 3.4E-16 T 23-04-2016 IPR005116 Transport-associated OB, type 1 LT40_RS09040 7412ce8af95b8c7c047fcfbf31cad313 292 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 291 2.1E-70 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LT40_RS09040 7412ce8af95b8c7c047fcfbf31cad313 292 PANTHER PTHR13774:SF18 1 288 2.0E-98 T 23-04-2016 LT40_RS09040 7412ce8af95b8c7c047fcfbf31cad313 292 Gene3D G3DSA:3.10.310.10 134 280 1.1E-32 T 23-04-2016 LT40_RS09040 7412ce8af95b8c7c047fcfbf31cad313 292 Gene3D G3DSA:3.10.310.10 2 133 4.0E-46 T 23-04-2016 LT40_RS09040 7412ce8af95b8c7c047fcfbf31cad313 292 PANTHER PTHR13774 1 288 2.0E-98 T 23-04-2016 LT40_RS09040 7412ce8af95b8c7c047fcfbf31cad313 292 PIRSF PIRSF016184 1 291 1.5E-78 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LT40_RS09040 7412ce8af95b8c7c047fcfbf31cad313 292 SUPERFAMILY SSF54506 4 290 7.07E-73 T 23-04-2016 LT40_RS09040 7412ce8af95b8c7c047fcfbf31cad313 292 Pfam PF02567 Phenazine biosynthesis-like protein 9 288 2.0E-68 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 194 216 2.0E-15 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 32 57 2.0E-15 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 150 176 2.0E-15 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 104 124 2.0E-15 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 83 103 2.0E-15 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 Gene3D G3DSA:3.90.380.10 158 386 4.0E-33 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 SUPERFAMILY SSF50022 13 165 1.7E-38 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 201 385 4.7E-32 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 Pfam PF00355 Rieske [2Fe-2S] domain 48 130 3.0E-17 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 PANTHER PTHR21266:SF2 17 384 9.5E-61 T 23-04-2016 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 Gene3D G3DSA:2.102.10.10 48 157 3.1E-20 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 PANTHER PTHR21266 17 384 9.5E-61 T 23-04-2016 LT40_RS07020 b153b1033a2966654c2fd43c6e9837cc 392 SUPERFAMILY SSF55961 166 387 1.1E-48 T 23-04-2016 LT40_RS12235 fb563949cb480263a043685ab5acaa0d 73 Gene3D G3DSA:1.10.260.40 11 63 5.4E-4 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS12235 fb563949cb480263a043685ab5acaa0d 73 TIGRFAM TIGR04111 BcepMu_gp16: phage-associated protein, BcepMu gp16 family 6 60 2.5E-24 T 23-04-2016 IPR026365 Phage-associated protein, BcepMu gp16 family LT40_RS20735 46c22c1ac31a0a0c7b63e03e9d72a814 278 PANTHER PTHR37296 1 278 7.4E-105 T 23-04-2016 LT40_RS20735 46c22c1ac31a0a0c7b63e03e9d72a814 278 PIRSF PIRSF012524 1 278 3.0E-89 T 23-04-2016 IPR014464 Conserved virulence factor B LT40_RS20735 46c22c1ac31a0a0c7b63e03e9d72a814 278 SMART SM00316 71 133 10.0 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS20735 46c22c1ac31a0a0c7b63e03e9d72a814 278 SMART SM00316 146 208 0.0066 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS20735 46c22c1ac31a0a0c7b63e03e9d72a814 278 Pfam PF13509 S1 domain 4 66 1.1E-22 T 23-04-2016 LT40_RS20735 46c22c1ac31a0a0c7b63e03e9d72a814 278 Pfam PF13509 S1 domain 72 130 1.0E-8 T 23-04-2016 LT40_RS02645 f96f6851472be07c0bc641d071e6edc0 301 PIRSF PIRSF016660 1 299 1.3E-119 T 23-04-2016 IPR008526 Inner membrane protein YedI LT40_RS02645 f96f6851472be07c0bc641d071e6edc0 301 Pfam PF05661 Protein of unknown function (DUF808) 5 287 3.5E-111 T 23-04-2016 IPR008526 Inner membrane protein YedI LT40_RS02645 f96f6851472be07c0bc641d071e6edc0 301 PANTHER PTHR30503 2 290 1.2E-91 T 23-04-2016 LT40_RS10085 3c37727ffbee4fb5456c91d2cefa8925 281 Pfam PF02709 N-terminal domain of galactosyltransferase 155 200 6.0E-9 T 23-04-2016 IPR027791 Galactosyltransferase, C-terminal UniPathway: UPA00378 LT40_RS10085 3c37727ffbee4fb5456c91d2cefa8925 281 Gene3D G3DSA:3.90.550.10 3 119 2.3E-20 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS10085 3c37727ffbee4fb5456c91d2cefa8925 281 Gene3D G3DSA:3.90.550.10 151 230 2.3E-20 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS10085 3c37727ffbee4fb5456c91d2cefa8925 281 SUPERFAMILY SSF53448 2 118 6.0E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS10085 3c37727ffbee4fb5456c91d2cefa8925 281 SUPERFAMILY SSF53448 150 254 6.0E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS04450 ebea3fc4df8f5c9be2b05bcfe395ea38 74 PANTHER PTHR26402:SF102 11 73 3.1E-19 T 23-04-2016 LT40_RS04450 ebea3fc4df8f5c9be2b05bcfe395ea38 74 Pfam PF00196 Bacterial regulatory proteins, luxR family 11 65 9.6E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS04450 ebea3fc4df8f5c9be2b05bcfe395ea38 74 PANTHER PTHR26402 11 73 3.1E-19 T 23-04-2016 LT40_RS04450 ebea3fc4df8f5c9be2b05bcfe395ea38 74 SMART SM00421 8 65 2.1E-17 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS04450 ebea3fc4df8f5c9be2b05bcfe395ea38 74 ProSitePatterns PS00622 LuxR-type HTH domain signature. 25 52 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS04450 ebea3fc4df8f5c9be2b05bcfe395ea38 74 Gene3D G3DSA:1.10.10.10 10 71 2.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04450 ebea3fc4df8f5c9be2b05bcfe395ea38 74 SUPERFAMILY SSF46894 6 71 3.4E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS04450 ebea3fc4df8f5c9be2b05bcfe395ea38 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 25 41 1.4E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS04450 ebea3fc4df8f5c9be2b05bcfe395ea38 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 11 25 1.4E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS04450 ebea3fc4df8f5c9be2b05bcfe395ea38 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 41 53 1.4E-9 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS00115 5628d33dfc93ee640aa84db12b4cad94 453 PANTHER PTHR37944 35 453 3.0E-151 T 23-04-2016 LT40_RS00115 5628d33dfc93ee640aa84db12b4cad94 453 PANTHER PTHR37944:SF1 35 453 3.0E-151 T 23-04-2016 LT40_RS00115 5628d33dfc93ee640aa84db12b4cad94 453 Pfam PF04966 Carbohydrate-selective porin, OprB family 81 453 1.5E-111 T 23-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 LT40_RS02255 6fc610293ae07cca4e94cc90d42fc719 447 PANTHER PTHR20852 16 447 2.3E-193 T 23-04-2016 LT40_RS02255 6fc610293ae07cca4e94cc90d42fc719 447 PANTHER PTHR20852:SF63 16 447 2.3E-193 T 23-04-2016 LT40_RS02255 6fc610293ae07cca4e94cc90d42fc719 447 SMART SM01230 109 365 2.3E-99 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS02255 6fc610293ae07cca4e94cc90d42fc719 447 Gene3D G3DSA:3.30.590.10 112 431 2.7E-89 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 LT40_RS02255 6fc610293ae07cca4e94cc90d42fc719 447 SUPERFAMILY SSF55931 109 442 4.41E-100 T 23-04-2016 LT40_RS02255 6fc610293ae07cca4e94cc90d42fc719 447 SUPERFAMILY SSF54368 14 105 2.49E-12 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS02255 6fc610293ae07cca4e94cc90d42fc719 447 Pfam PF00120 Glutamine synthetase, catalytic domain 111 441 5.8E-103 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS02255 6fc610293ae07cca4e94cc90d42fc719 447 Gene3D G3DSA:3.10.20.70 14 105 4.2E-6 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 Gene3D G3DSA:3.30.1490.20 129 200 3.0E-26 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 4.1E-39 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 SUPERFAMILY SSF51246 329 445 1.1E-41 T 23-04-2016 IPR011054 Rudiment single hybrid motif LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 SMART SM00878 334 440 2.4E-58 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 PANTHER PTHR18866 1 468 0.0 T 23-04-2016 LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 Gene3D G3DSA:3.30.470.20 203 445 7.2E-95 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 320 5.2E-73 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 PANTHER PTHR18866:SF111 1 468 0.0 T 23-04-2016 LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 SUPERFAMILY SSF56059 82 346 5.83E-66 T 23-04-2016 LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 Gene3D G3DSA:3.40.50.20 2 128 5.1E-50 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 SUPERFAMILY SSF52440 1 112 1.44E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS16275 d6d9d3807691aaf3a72c6ea1773288bb 471 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 1.3E-42 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain LT40_RS05895 6cefd9460731f46945a4bc83fb868272 233 SUPERFAMILY SSF53335 2 181 1.01E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS05895 6cefd9460731f46945a4bc83fb868272 233 Pfam PF01564 Spermine/spermidine synthase 42 156 5.4E-5 T 23-04-2016 LT40_RS05895 6cefd9460731f46945a4bc83fb868272 233 Gene3D G3DSA:3.40.50.150 2 215 3.0E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS05895 6cefd9460731f46945a4bc83fb868272 233 PANTHER PTHR11558 2 178 6.5E-15 T 23-04-2016 LT40_RS17305 a3bd90e994e39f51afa509a4ebf604c0 388 SUPERFAMILY SSF103473 3 381 9.68E-53 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS17305 a3bd90e994e39f51afa509a4ebf604c0 388 Gene3D G3DSA:1.20.1250.20 5 181 1.5E-23 T 23-04-2016 LT40_RS17305 a3bd90e994e39f51afa509a4ebf604c0 388 Pfam PF07690 Major Facilitator Superfamily 8 317 9.5E-36 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS17305 a3bd90e994e39f51afa509a4ebf604c0 388 Gene3D G3DSA:1.20.1250.20 192 377 1.4E-10 T 23-04-2016 LT40_RS17305 a3bd90e994e39f51afa509a4ebf604c0 388 PANTHER PTHR23501 1 380 3.1E-147 T 23-04-2016 LT40_RS17305 a3bd90e994e39f51afa509a4ebf604c0 388 PANTHER PTHR23501:SF4 1 380 3.1E-147 T 23-04-2016 LT40_RS00765 68f0e6917d8b09af4a4a935d204184bf 183 Pfam PF06938 Protein of unknown function (DUF1285) 35 175 1.4E-55 T 23-04-2016 IPR010707 Protein of unknown function DUF1285 LT40_RS00765 68f0e6917d8b09af4a4a935d204184bf 183 Gene3D G3DSA:2.30.270.10 86 155 1.3E-31 T 23-04-2016 IPR023361 Protein of unknown function DUF1285, beta-roll domain LT40_RS00765 68f0e6917d8b09af4a4a935d204184bf 183 Gene3D G3DSA:3.10.540.10 14 85 8.1E-36 T 23-04-2016 LT40_RS00765 68f0e6917d8b09af4a4a935d204184bf 183 PIRSF PIRSF029557 2 183 6.5E-73 T 23-04-2016 IPR010707 Protein of unknown function DUF1285 LT40_RS00765 68f0e6917d8b09af4a4a935d204184bf 183 Gene3D G3DSA:2.20.70.10 160 179 4.7E-8 T 23-04-2016 LT40_RS20180 7c8989e8690cce3c2ffaca238301b37c 286 Pfam PF13437 HlyD family secretion protein 153 233 1.2E-8 T 23-04-2016 LT40_RS20180 7c8989e8690cce3c2ffaca238301b37c 286 PANTHER PTHR30367:SF5 7 284 1.3E-128 T 23-04-2016 LT40_RS20180 7c8989e8690cce3c2ffaca238301b37c 286 Pfam PF13533 Biotin-lipoyl like 44 90 3.5E-17 T 23-04-2016 LT40_RS20180 7c8989e8690cce3c2ffaca238301b37c 286 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 226 3.8E-32 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LT40_RS20180 7c8989e8690cce3c2ffaca238301b37c 286 Gene3D G3DSA:2.40.50.100 44 76 3.3E-18 T 23-04-2016 LT40_RS20180 7c8989e8690cce3c2ffaca238301b37c 286 Gene3D G3DSA:2.40.50.100 150 183 3.3E-18 T 23-04-2016 LT40_RS20180 7c8989e8690cce3c2ffaca238301b37c 286 SUPERFAMILY SSF111369 42 183 1.07E-21 T 23-04-2016 LT40_RS20180 7c8989e8690cce3c2ffaca238301b37c 286 PANTHER PTHR30367 7 284 1.3E-128 T 23-04-2016 LT40_RS00770 ccd166302787a2fa9e430edb5efdaddf 814 Pfam PF01804 Penicillin amidase 56 800 7.8E-174 T 23-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 LT40_RS00770 ccd166302787a2fa9e430edb5efdaddf 814 PANTHER PTHR34218:SF2 1 814 2.6E-196 T 23-04-2016 LT40_RS00770 ccd166302787a2fa9e430edb5efdaddf 814 Gene3D G3DSA:1.10.439.10 43 207 4.8E-41 T 23-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 LT40_RS00770 ccd166302787a2fa9e430edb5efdaddf 814 Gene3D G3DSA:2.30.120.10 336 402 1.8E-15 T 23-04-2016 LT40_RS00770 ccd166302787a2fa9e430edb5efdaddf 814 PANTHER PTHR34218 1 814 2.6E-196 T 23-04-2016 LT40_RS00770 ccd166302787a2fa9e430edb5efdaddf 814 Gene3D G3DSA:3.60.20.10 416 663 5.0E-80 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS00770 ccd166302787a2fa9e430edb5efdaddf 814 Gene3D G3DSA:3.60.20.10 260 335 5.0E-80 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS00770 ccd166302787a2fa9e430edb5efdaddf 814 SUPERFAMILY SSF56235 52 804 8.49E-184 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS00770 ccd166302787a2fa9e430edb5efdaddf 814 PIRSF PIRSF001227 17 810 5.0E-142 T 23-04-2016 IPR014395 Penicillin acylase GO:0016811 LT40_RS06165 69f6a17607a80222947d8421caddde6d 228 Gene3D G3DSA:3.40.50.300 5 221 7.6E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06165 69f6a17607a80222947d8421caddde6d 228 PANTHER PTHR21299 5 227 1.6E-70 T 23-04-2016 LT40_RS06165 69f6a17607a80222947d8421caddde6d 228 Pfam PF02224 Cytidylate kinase 7 221 1.1E-75 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LT40_RS06165 69f6a17607a80222947d8421caddde6d 228 SUPERFAMILY SSF52540 5 221 3.07E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06165 69f6a17607a80222947d8421caddde6d 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 220 2.2E-81 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LT40_RS06165 69f6a17607a80222947d8421caddde6d 228 Hamap MF_00238 Cytidylate kinase [cmk]. 5 225 34.22 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LT40_RS03855 a0a71f7a1526164089407339b9e5db84 211 PANTHER PTHR21403:SF3 1 210 7.3E-96 T 23-04-2016 LT40_RS03855 a0a71f7a1526164089407339b9e5db84 211 Pfam PF01634 ATP phosphoribosyltransferase 51 202 9.4E-47 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LT40_RS03855 a0a71f7a1526164089407339b9e5db84 211 PANTHER PTHR21403 1 210 7.3E-96 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LT40_RS03855 a0a71f7a1526164089407339b9e5db84 211 Gene3D G3DSA:3.40.190.10 112 174 2.8E-28 T 23-04-2016 LT40_RS03855 a0a71f7a1526164089407339b9e5db84 211 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 182 2.9E-54 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LT40_RS03855 a0a71f7a1526164089407339b9e5db84 211 Gene3D G3DSA:3.40.190.10 1 111 9.0E-34 T 23-04-2016 LT40_RS03855 a0a71f7a1526164089407339b9e5db84 211 SUPERFAMILY SSF53850 1 205 3.26E-64 T 23-04-2016 LT40_RS03855 a0a71f7a1526164089407339b9e5db84 211 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LT40_RS03855 a0a71f7a1526164089407339b9e5db84 211 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 206 57.469 T 23-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 Pfam PF00571 CBS domain 95 139 1.9E-7 T 23-04-2016 IPR000644 CBS domain LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 SUPERFAMILY SSF54631 95 202 3.66E-24 T 23-04-2016 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 6.2E-165 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 SUPERFAMILY SSF51412 216 479 9.68E-128 T 23-04-2016 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 SUPERFAMILY SSF51412 2 90 9.68E-128 T 23-04-2016 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 PANTHER PTHR11911 1 281 4.3E-249 T 23-04-2016 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 PANTHER PTHR11911 299 487 4.3E-249 T 23-04-2016 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 PIRSF PIRSF000130 1 489 1.3E-204 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 SMART SM00116 157 205 0.012 T 23-04-2016 IPR000644 CBS domain LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 SMART SM00116 96 143 1.5E-7 T 23-04-2016 IPR000644 CBS domain LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 84.662 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 1.8E-190 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 PANTHER PTHR11911:SF6 1 281 4.3E-249 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 PANTHER PTHR11911:SF6 299 487 4.3E-249 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 SMART SM01240 7 475 0.0 T 23-04-2016 LT40_RS20205 051ba3ecb4347daa0817af1620cf96ee 489 Gene3D G3DSA:3.20.20.70 2 487 1.9E-201 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS14790 6259466aa897d80731671b292c6a0b54 270 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 262 1.1E-86 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 LT40_RS14790 6259466aa897d80731671b292c6a0b54 270 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 262 19.782 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 LT40_RS14790 6259466aa897d80731671b292c6a0b54 270 PANTHER PTHR30589:SF0 1 263 1.4E-113 T 23-04-2016 LT40_RS14790 6259466aa897d80731671b292c6a0b54 270 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 257 2.0E-81 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 LT40_RS14790 6259466aa897d80731671b292c6a0b54 270 PANTHER PTHR30589 1 263 1.4E-113 T 23-04-2016 LT40_RS14790 6259466aa897d80731671b292c6a0b54 270 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 LT40_RS19345 357c5f3c7a22065b5c7af835591e915e 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LT40_RS19345 357c5f3c7a22065b5c7af835591e915e 417 PANTHER PTHR11680:SF9 1 415 0.0 T 23-04-2016 LT40_RS19345 357c5f3c7a22065b5c7af835591e915e 417 PIRSF PIRSF000412 1 417 3.1E-167 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LT40_RS19345 357c5f3c7a22065b5c7af835591e915e 417 Gene3D G3DSA:3.90.1150.10 285 416 3.1E-54 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS19345 357c5f3c7a22065b5c7af835591e915e 417 Gene3D G3DSA:3.40.640.10 37 284 5.0E-109 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS19345 357c5f3c7a22065b5c7af835591e915e 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 53.229 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LT40_RS19345 357c5f3c7a22065b5c7af835591e915e 417 Pfam PF00464 Serine hydroxymethyltransferase 8 385 3.2E-183 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LT40_RS19345 357c5f3c7a22065b5c7af835591e915e 417 PANTHER PTHR11680 1 415 0.0 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 LT40_RS19345 357c5f3c7a22065b5c7af835591e915e 417 SUPERFAMILY SSF53383 5 415 3.58E-182 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS04670 47ea0e74bd784c4d09b296c7da447779 309 PANTHER PTHR30126 1 242 1.1E-48 T 23-04-2016 LT40_RS04670 47ea0e74bd784c4d09b296c7da447779 309 SUPERFAMILY SSF53850 92 300 1.17E-22 T 23-04-2016 LT40_RS04670 47ea0e74bd784c4d09b296c7da447779 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.1E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS04670 47ea0e74bd784c4d09b296c7da447779 309 Gene3D G3DSA:1.10.10.10 1 87 1.8E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04670 47ea0e74bd784c4d09b296c7da447779 309 Gene3D G3DSA:3.40.190.10 183 246 1.1E-4 T 23-04-2016 LT40_RS04670 47ea0e74bd784c4d09b296c7da447779 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS04670 47ea0e74bd784c4d09b296c7da447779 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS04670 47ea0e74bd784c4d09b296c7da447779 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS04670 47ea0e74bd784c4d09b296c7da447779 309 Pfam PF03466 LysR substrate binding domain 92 297 6.5E-21 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS04670 47ea0e74bd784c4d09b296c7da447779 309 SUPERFAMILY SSF46785 1 86 6.99E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04670 47ea0e74bd784c4d09b296c7da447779 309 Gene3D G3DSA:3.40.190.10 92 182 5.5E-17 T 23-04-2016 LT40_RS06755 ecc9acb802ff27bafadd4dd9264ec06d 738 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 92 734 9.5E-105 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS06755 ecc9acb802ff27bafadd4dd9264ec06d 738 PANTHER PTHR32552:SF37 82 738 1.7E-207 T 23-04-2016 LT40_RS06755 ecc9acb802ff27bafadd4dd9264ec06d 738 PANTHER PTHR32552:SF37 38 56 1.7E-207 T 23-04-2016 LT40_RS06755 ecc9acb802ff27bafadd4dd9264ec06d 738 Gene3D G3DSA:2.170.130.10 69 199 4.4E-37 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS06755 ecc9acb802ff27bafadd4dd9264ec06d 738 Pfam PF07715 TonB-dependent Receptor Plug Domain 90 190 9.6E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS06755 ecc9acb802ff27bafadd4dd9264ec06d 738 SUPERFAMILY SSF56935 82 737 3.82E-128 T 23-04-2016 LT40_RS06755 ecc9acb802ff27bafadd4dd9264ec06d 738 PANTHER PTHR32552 82 738 1.7E-207 T 23-04-2016 LT40_RS06755 ecc9acb802ff27bafadd4dd9264ec06d 738 PANTHER PTHR32552 38 56 1.7E-207 T 23-04-2016 LT40_RS06755 ecc9acb802ff27bafadd4dd9264ec06d 738 Gene3D G3DSA:2.40.170.20 207 736 1.1E-135 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS06755 ecc9acb802ff27bafadd4dd9264ec06d 738 Pfam PF00593 TonB dependent receptor 494 737 8.2E-30 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 SMART SM00304 211 263 1.0E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 PANTHER PTHR32089:SF1 191 540 1.4E-88 T 23-04-2016 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 PANTHER PTHR32089 191 540 1.4E-88 T 23-04-2016 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 182 2.6E-16 T 23-04-2016 IPR024478 4HB MCP domain LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 299 328 3.2E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 3.2E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 3.2E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 3.2E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 538 1.1E-39 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 Gene3D G3DSA:1.10.287.950 294 510 5.1E-46 T 23-04-2016 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 SUPERFAMILY SSF58104 231 540 2.62E-59 T 23-04-2016 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 SMART SM00283 271 539 3.2E-47 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS20435 292c262ecdcde9d50936e9e1b5b02dfc 540 Pfam PF00672 HAMP domain 191 259 4.7E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS18075 c8f7d4d4dbe026fb30404dcb1b9e88e2 126 Pfam PF04379 Protein of unknown function (DUF525) 18 103 4.7E-33 T 23-04-2016 IPR007474 ApaG domain LT40_RS18075 c8f7d4d4dbe026fb30404dcb1b9e88e2 126 Gene3D G3DSA:2.60.40.1470 7 125 4.3E-44 T 23-04-2016 IPR007474 ApaG domain LT40_RS18075 c8f7d4d4dbe026fb30404dcb1b9e88e2 126 SUPERFAMILY SSF110069 7 126 1.19E-45 T 23-04-2016 IPR007474 ApaG domain LT40_RS18075 c8f7d4d4dbe026fb30404dcb1b9e88e2 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 32.437 T 23-04-2016 IPR023065 Uncharacterised protein family ApaG LT40_RS18075 c8f7d4d4dbe026fb30404dcb1b9e88e2 126 PANTHER PTHR14289 7 123 4.2E-49 T 23-04-2016 LT40_RS09130 2c398bcd404e6f2b269c5601074175bb 293 Gene3D G3DSA:3.40.50.150 36 217 6.0E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS09130 2c398bcd404e6f2b269c5601074175bb 293 SUPERFAMILY SSF53335 9 175 7.91E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS12755 93fb76aaad2ece19979e129d24e97361 144 Pfam PF13511 Domain of unknown function (DUF4124) 10 59 1.5E-16 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 LT40_RS04425 22a1e03ddf66f150e2decbece667eb7b 439 Gene3D G3DSA:1.20.1250.20 237 434 8.6E-25 T 23-04-2016 LT40_RS04425 22a1e03ddf66f150e2decbece667eb7b 439 Gene3D G3DSA:1.20.1250.20 28 236 2.1E-25 T 23-04-2016 LT40_RS04425 22a1e03ddf66f150e2decbece667eb7b 439 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 34 419 3.5E-136 T 23-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 LT40_RS04425 22a1e03ddf66f150e2decbece667eb7b 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS04425 22a1e03ddf66f150e2decbece667eb7b 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS04425 22a1e03ddf66f150e2decbece667eb7b 439 PANTHER PTHR23508 18 439 2.8E-255 T 23-04-2016 LT40_RS04425 22a1e03ddf66f150e2decbece667eb7b 439 SUPERFAMILY SSF103473 26 436 1.44E-68 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04425 22a1e03ddf66f150e2decbece667eb7b 439 PANTHER PTHR23508:SF4 18 439 2.8E-255 T 23-04-2016 LT40_RS04425 22a1e03ddf66f150e2decbece667eb7b 439 Pfam PF07690 Major Facilitator Superfamily 48 380 5.4E-30 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 Gene3D G3DSA:3.90.640.10 189 260 1.9E-28 T 23-04-2016 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 337 1.6E-161 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 Gene3D G3DSA:3.30.420.40 9 161 4.5E-47 T 23-04-2016 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 Pfam PF06723 MreB/Mbl protein 11 337 8.0E-149 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 302 328 1.8E-65 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 134 153 1.8E-65 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 1.8E-65 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 189 209 1.8E-65 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 1.8E-65 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 SUPERFAMILY SSF53067 9 150 1.87E-38 T 23-04-2016 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 PANTHER PTHR19375:SF117 9 334 2.4E-183 T 23-04-2016 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 Gene3D G3DSA:3.30.420.40 162 188 3.9E-34 T 23-04-2016 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 Gene3D G3DSA:3.30.420.40 265 319 3.9E-34 T 23-04-2016 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 SUPERFAMILY SSF53067 151 340 3.46E-48 T 23-04-2016 LT40_RS03700 5142cfcc9032fbc848d29a24a75e561a 345 PANTHER PTHR19375 9 334 2.4E-183 T 23-04-2016 LT40_RS01895 3144d485fe51c8eb22504cb2f7d1bd1c 272 PANTHER PTHR31756:SF3 1 272 1.7E-112 T 23-04-2016 LT40_RS01895 3144d485fe51c8eb22504cb2f7d1bd1c 272 Pfam PF03618 Kinase/pyrophosphorylase 6 262 5.9E-76 T 23-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 LT40_RS01895 3144d485fe51c8eb22504cb2f7d1bd1c 272 PANTHER PTHR31756 1 272 1.7E-112 T 23-04-2016 LT40_RS01895 3144d485fe51c8eb22504cb2f7d1bd1c 272 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 271 76.809 T 23-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein LT40_RS13615 ebc1ab6b5b2e2bb66c383b7ee0c36105 179 Gene3D G3DSA:1.20.1260.10 31 177 1.3E-49 T 23-04-2016 IPR012347 Ferritin-related LT40_RS13615 ebc1ab6b5b2e2bb66c383b7ee0c36105 179 PIRSF PIRSF018063 15 179 1.5E-60 T 23-04-2016 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold LT40_RS13615 ebc1ab6b5b2e2bb66c383b7ee0c36105 179 Pfam PF00210 Ferritin-like domain 40 177 2.2E-28 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LT40_RS13615 ebc1ab6b5b2e2bb66c383b7ee0c36105 179 SUPERFAMILY SSF47240 34 176 1.99E-38 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS13615 ebc1ab6b5b2e2bb66c383b7ee0c36105 179 PANTHER PTHR30295 19 175 9.9E-52 T 23-04-2016 LT40_RS13615 ebc1ab6b5b2e2bb66c383b7ee0c36105 179 PANTHER PTHR30295:SF1 19 175 9.9E-52 T 23-04-2016 LT40_RS18080 35315837a049910e5572f6935e64049e 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 7 262 57.785 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 LT40_RS18080 35315837a049910e5572f6935e64049e 268 Gene3D G3DSA:3.40.50.150 3 195 1.4E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS18080 35315837a049910e5572f6935e64049e 268 SMART SM00650 23 195 5.7E-90 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 LT40_RS18080 35315837a049910e5572f6935e64049e 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 7 260 5.5E-86 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 LT40_RS18080 35315837a049910e5572f6935e64049e 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 66 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 LT40_RS18080 35315837a049910e5572f6935e64049e 268 Gene3D G3DSA:1.10.8.100 198 263 2.8E-26 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like LT40_RS18080 35315837a049910e5572f6935e64049e 268 SUPERFAMILY SSF53335 6 262 6.14E-81 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS18080 35315837a049910e5572f6935e64049e 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 7 261 2.1E-65 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LT40_RS18080 35315837a049910e5572f6935e64049e 268 PANTHER PTHR11727 3 266 3.8E-102 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LT40_RS00090 1644d578e1a6930140a0cd10afb9eed8 224 SUPERFAMILY SSF49503 38 135 2.67E-16 T 23-04-2016 IPR008972 Cupredoxin LT40_RS00090 1644d578e1a6930140a0cd10afb9eed8 224 SUPERFAMILY SSF117074 117 168 1.44E-7 T 23-04-2016 LT40_RS00090 1644d578e1a6930140a0cd10afb9eed8 224 Gene3D G3DSA:2.60.40.420 44 136 7.0E-10 T 23-04-2016 IPR008972 Cupredoxin LT40_RS07440 7ce0137d8b7c294b072a3dcbabc2d07c 928 PANTHER PTHR11219 43 660 3.8E-127 T 23-04-2016 LT40_RS07440 7ce0137d8b7c294b072a3dcbabc2d07c 928 PANTHER PTHR11219:SF45 43 660 3.8E-127 T 23-04-2016 LT40_RS07440 7ce0137d8b7c294b072a3dcbabc2d07c 928 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 575 652 5.6E-25 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.3E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.3E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.3E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.6E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.6E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.6E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 PANTHER PTHR24321:SF6 1 248 1.9E-50 T 23-04-2016 LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 PANTHER PTHR24321 1 248 1.9E-50 T 23-04-2016 LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 SUPERFAMILY SSF51735 4 248 1.3E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 1.0E-71 T 23-04-2016 LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 Gene3D G3DSA:3.40.50.720 3 248 6.1E-87 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 209 0.0078 T 23-04-2016 LT40_RS04510 aa55f1209783e88c9f9e2614640612cb 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS06685 fd5885e2df46b9efefc2e9d610aa77d9 445 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 240 421 2.0E-32 T 23-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 LT40_RS06685 fd5885e2df46b9efefc2e9d610aa77d9 445 SUPERFAMILY SSF52317 237 429 1.49E-30 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS06685 fd5885e2df46b9efefc2e9d610aa77d9 445 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 10 161 1.5E-19 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LT40_RS06685 fd5885e2df46b9efefc2e9d610aa77d9 445 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 7 422 36.915 T 23-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 LT40_RS06685 fd5885e2df46b9efefc2e9d610aa77d9 445 Gene3D G3DSA:3.40.50.300 7 193 8.8E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06685 fd5885e2df46b9efefc2e9d610aa77d9 445 SUPERFAMILY SSF52540 9 195 1.36E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06685 fd5885e2df46b9efefc2e9d610aa77d9 445 PANTHER PTHR21343:SF6 2 430 6.1E-133 T 23-04-2016 LT40_RS06685 fd5885e2df46b9efefc2e9d610aa77d9 445 PANTHER PTHR21343 2 430 6.1E-133 T 23-04-2016 LT40_RS06685 fd5885e2df46b9efefc2e9d610aa77d9 445 Gene3D G3DSA:3.40.50.880 239 423 2.2E-24 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS10805 1b1fcc5f611815a7d1b9ea99d264e3db 335 PIRSF PIRSF015753 4 322 9.4E-134 T 23-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 LT40_RS10805 1b1fcc5f611815a7d1b9ea99d264e3db 335 Gene3D G3DSA:3.40.30.10 39 169 3.4E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS10805 1b1fcc5f611815a7d1b9ea99d264e3db 335 Pfam PF13410 Glutathione S-transferase, C-terminal domain 202 273 1.3E-9 T 23-04-2016 LT40_RS10805 1b1fcc5f611815a7d1b9ea99d264e3db 335 SUPERFAMILY SSF47616 178 323 3.9E-34 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS10805 1b1fcc5f611815a7d1b9ea99d264e3db 335 PANTHER PTHR32419 1 327 2.0E-174 T 23-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 LT40_RS10805 1b1fcc5f611815a7d1b9ea99d264e3db 335 Pfam PF13409 Glutathione S-transferase, N-terminal domain 61 156 4.3E-23 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LT40_RS10805 1b1fcc5f611815a7d1b9ea99d264e3db 335 Gene3D G3DSA:1.20.1050.10 170 286 2.4E-22 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS10805 1b1fcc5f611815a7d1b9ea99d264e3db 335 SUPERFAMILY SSF52833 40 159 1.9E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS10805 1b1fcc5f611815a7d1b9ea99d264e3db 335 PANTHER PTHR32419:SF6 1 327 2.0E-174 T 23-04-2016 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 PANTHER PTHR10322 71 787 5.9E-203 T 23-04-2016 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 Pfam PF00136 DNA polymerase family B 378 432 3.7E-8 T 23-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 Pfam PF00136 DNA polymerase family B 492 739 2.5E-28 T 23-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 SUPERFAMILY SSF53098 4 391 7.12E-90 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 543 551 7.1E-10 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 491 503 7.1E-10 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 7.1E-10 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 Pfam PF03104 DNA polymerase family B, exonuclease domain 202 298 1.2E-8 T 23-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 Gene3D G3DSA:3.30.420.10 150 367 3.9E-35 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 Gene3D G3DSA:3.90.1600.10 399 433 3.4E-9 T 23-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 Gene3D G3DSA:3.90.1600.10 514 553 3.4E-9 T 23-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 ProSitePatterns PS00116 DNA polymerase family B signature. 545 553 - T 23-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 SUPERFAMILY SSF56672 386 782 1.22E-111 T 23-04-2016 LT40_RS12140 80905283dec98acc1a2f0bf110a022ac 788 SMART SM00486 150 557 4.8E-72 T 23-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS06430 483acbee01ec976aed6a558ae7eeac8b 344 SUPERFAMILY SSF56042 163 336 6.43E-49 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS06430 483acbee01ec976aed6a558ae7eeac8b 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 49 156 1.4E-19 T 23-04-2016 IPR016188 PurM-like, N-terminal domain LT40_RS06430 483acbee01ec976aed6a558ae7eeac8b 344 SUPERFAMILY SSF55326 6 159 2.99E-38 T 23-04-2016 LT40_RS06430 483acbee01ec976aed6a558ae7eeac8b 344 PIRSF PIRSF036407 1 344 4.5E-113 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 LT40_RS06430 483acbee01ec976aed6a558ae7eeac8b 344 TIGRFAM TIGR00476 selD: selenide, water dikinase 6 310 7.9E-135 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 LT40_RS06430 483acbee01ec976aed6a558ae7eeac8b 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 168 336 6.3E-27 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS06430 483acbee01ec976aed6a558ae7eeac8b 344 PANTHER PTHR10256 1 335 1.1E-146 T 23-04-2016 LT40_RS06430 483acbee01ec976aed6a558ae7eeac8b 344 Gene3D G3DSA:3.30.1330.10 38 161 2.0E-30 T 23-04-2016 IPR016188 PurM-like, N-terminal domain LT40_RS06430 483acbee01ec976aed6a558ae7eeac8b 344 Gene3D G3DSA:3.90.650.10 173 341 7.3E-15 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain LT40_RS06430 483acbee01ec976aed6a558ae7eeac8b 344 Hamap MF_00625 Selenide, water dikinase [selD]. 4 344 44.733 T 23-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 SUPERFAMILY SSF46689 189 239 1.97E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 PANTHER PTHR11019 10 148 2.7E-83 T 23-04-2016 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 PANTHER PTHR11019 172 296 2.7E-83 T 23-04-2016 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 PANTHER PTHR11019:SF123 10 148 2.7E-83 T 23-04-2016 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 PANTHER PTHR11019:SF123 172 296 2.7E-83 T 23-04-2016 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 4.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 4.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 SUPERFAMILY SSF51215 30 81 2.35E-6 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 SUPERFAMILY SSF46689 241 289 8.51E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 Gene3D G3DSA:1.10.10.60 242 289 2.2E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 Gene3D G3DSA:1.10.10.60 186 241 1.1E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 Gene3D G3DSA:2.60.120.280 35 82 1.1E-4 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 SMART SM00342 205 288 3.2E-31 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS09435 50fec360736007baf25a7e43c9408a92 297 Pfam PF12833 Helix-turn-helix domain 211 289 1.8E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS04640 4d624270b2517706597469d5a587dc77 229 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 220 1.1E-69 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 LT40_RS04640 4d624270b2517706597469d5a587dc77 229 Gene3D G3DSA:1.10.1520.10 5 140 4.3E-46 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LT40_RS04640 4d624270b2517706597469d5a587dc77 229 Pfam PF14622 Ribonuclease-III-like 18 138 3.3E-35 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LT40_RS04640 4d624270b2517706597469d5a587dc77 229 PANTHER PTHR11207 3 219 1.0E-86 T 23-04-2016 LT40_RS04640 4d624270b2517706597469d5a587dc77 229 Pfam PF00035 Double-stranded RNA binding motif 155 219 4.7E-9 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain LT40_RS04640 4d624270b2517706597469d5a587dc77 229 SMART SM00535 20 148 2.3E-54 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LT40_RS04640 4d624270b2517706597469d5a587dc77 229 SMART SM00358 155 223 7.0E-17 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain LT40_RS04640 4d624270b2517706597469d5a587dc77 229 SUPERFAMILY SSF54768 108 226 1.04E-24 T 23-04-2016 LT40_RS04640 4d624270b2517706597469d5a587dc77 229 SUPERFAMILY SSF69065 3 157 8.55E-50 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LT40_RS04640 4d624270b2517706597469d5a587dc77 229 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 LT40_RS04640 4d624270b2517706597469d5a587dc77 229 Gene3D G3DSA:3.30.160.20 152 223 1.9E-21 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain LT40_RS04640 4d624270b2517706597469d5a587dc77 229 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.422 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 LT40_RS19795 59f7d875420a9bd286d5de6cc66993db 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 LT40_RS19795 59f7d875420a9bd286d5de6cc66993db 194 PANTHER PTHR17224 6 193 6.6E-76 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LT40_RS19795 59f7d875420a9bd286d5de6cc66993db 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 190 5.6E-63 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LT40_RS19795 59f7d875420a9bd286d5de6cc66993db 194 SUPERFAMILY SSF53178 4 191 2.62E-67 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LT40_RS19795 59f7d875420a9bd286d5de6cc66993db 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 111 121 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 LT40_RS19795 59f7d875420a9bd286d5de6cc66993db 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 1.3E-52 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LT40_RS19795 59f7d875420a9bd286d5de6cc66993db 194 Gene3D G3DSA:3.40.50.1470 5 192 6.1E-68 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LT40_RS19795 59f7d875420a9bd286d5de6cc66993db 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 183 34.628 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LT40_RS16320 313eb4c739309a6247c2ff8b3b2d4939 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 159 1.4E-66 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LT40_RS16320 313eb4c739309a6247c2ff8b3b2d4939 163 Pfam PF00731 AIR carboxylase 5 152 5.0E-63 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LT40_RS16320 313eb4c739309a6247c2ff8b3b2d4939 163 PANTHER PTHR23046 1 162 1.6E-86 T 23-04-2016 LT40_RS16320 313eb4c739309a6247c2ff8b3b2d4939 163 PIRSF PIRSF001338 1 162 8.8E-65 T 23-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 LT40_RS16320 313eb4c739309a6247c2ff8b3b2d4939 163 PANTHER PTHR23046:SF2 1 162 1.6E-86 T 23-04-2016 LT40_RS16320 313eb4c739309a6247c2ff8b3b2d4939 163 SMART SM01001 3 154 1.3E-99 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LT40_RS16320 313eb4c739309a6247c2ff8b3b2d4939 163 Gene3D G3DSA:3.40.50.7700 3 159 4.0E-74 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LT40_RS16320 313eb4c739309a6247c2ff8b3b2d4939 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 31.599 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LT40_RS16320 313eb4c739309a6247c2ff8b3b2d4939 163 SUPERFAMILY SSF52255 4 161 3.53E-66 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 SUPERFAMILY SSF52518 357 556 2.11E-58 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 PANTHER PTHR18968:SF12 3 572 0.0 T 23-04-2016 LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 189 317 8.6E-27 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 PANTHER PTHR18968 3 572 0.0 T 23-04-2016 LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 SUPERFAMILY SSF52467 179 347 1.71E-41 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 Gene3D G3DSA:3.40.50.970 3 172 4.9E-51 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 170 1.6E-42 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 Gene3D G3DSA:3.40.50.970 352 559 4.8E-60 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 SUPERFAMILY SSF52518 2 176 2.27E-45 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 Gene3D G3DSA:3.40.50.1220 183 336 1.6E-40 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12485 c4f04452b5a477147bbf899f7b239078 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 1.5E-38 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LT40_RS18110 4a7b735ce985e539fc5bed4d07e3d90f 255 Gene3D G3DSA:1.10.3680.10 21 173 3.0E-14 T 23-04-2016 IPR029024 TerB-like LT40_RS18110 4a7b735ce985e539fc5bed4d07e3d90f 255 SUPERFAMILY SSF46565 131 249 2.22E-17 T 23-04-2016 IPR001623 DnaJ domain LT40_RS18110 4a7b735ce985e539fc5bed4d07e3d90f 255 SUPERFAMILY SSF158682 21 176 8.24E-15 T 23-04-2016 IPR029024 TerB-like LT40_RS18110 4a7b735ce985e539fc5bed4d07e3d90f 255 Gene3D G3DSA:1.10.287.110 189 248 1.3E-11 T 23-04-2016 IPR001623 DnaJ domain LT40_RS18110 4a7b735ce985e539fc5bed4d07e3d90f 255 Pfam PF00226 DnaJ domain 193 249 1.6E-8 T 23-04-2016 IPR001623 DnaJ domain LT40_RS18110 4a7b735ce985e539fc5bed4d07e3d90f 255 PRINTS PR00625 DnaJ domain signature 209 224 6.0E-8 T 23-04-2016 IPR001623 DnaJ domain LT40_RS18110 4a7b735ce985e539fc5bed4d07e3d90f 255 PRINTS PR00625 DnaJ domain signature 233 253 6.0E-8 T 23-04-2016 IPR001623 DnaJ domain LT40_RS18110 4a7b735ce985e539fc5bed4d07e3d90f 255 PRINTS PR00625 DnaJ domain signature 191 209 6.0E-8 T 23-04-2016 IPR001623 DnaJ domain LT40_RS18110 4a7b735ce985e539fc5bed4d07e3d90f 255 SMART SM00271 188 253 6.5E-10 T 23-04-2016 IPR001623 DnaJ domain LT40_RS18110 4a7b735ce985e539fc5bed4d07e3d90f 255 Pfam PF05099 Tellurite resistance protein TerB 57 163 7.0E-8 T 23-04-2016 IPR007791 Co-chaperone DjlA, N-terminal LT40_RS19670 7fff36aa4583ba0e96d7aa0f6040c3d9 194 Gene3D G3DSA:3.40.1580.10 137 185 1.5E-7 T 23-04-2016 IPR018958 SMI1/KNR4-like domain LT40_RS19670 7fff36aa4583ba0e96d7aa0f6040c3d9 194 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 29 181 4.2E-12 T 23-04-2016 IPR018958 SMI1/KNR4-like domain LT40_RS19670 7fff36aa4583ba0e96d7aa0f6040c3d9 194 SUPERFAMILY SSF160631 25 79 1.44E-8 T 23-04-2016 LT40_RS19670 7fff36aa4583ba0e96d7aa0f6040c3d9 194 SUPERFAMILY SSF160631 127 189 1.44E-8 T 23-04-2016 LT40_RS00210 e14380baa951a18344710b0c1feec756 500 SUPERFAMILY SSF103473 253 422 5.36E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS00210 e14380baa951a18344710b0c1feec756 500 SUPERFAMILY SSF103473 469 494 5.36E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS00210 e14380baa951a18344710b0c1feec756 500 SUPERFAMILY SSF103473 15 203 5.36E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS00210 e14380baa951a18344710b0c1feec756 500 Pfam PF07690 Major Facilitator Superfamily 28 412 6.9E-38 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS00210 e14380baa951a18344710b0c1feec756 500 Gene3D G3DSA:1.20.1250.20 21 200 4.2E-26 T 23-04-2016 LT40_RS00210 e14380baa951a18344710b0c1feec756 500 PANTHER PTHR23501:SF65 19 498 3.7E-110 T 23-04-2016 LT40_RS00210 e14380baa951a18344710b0c1feec756 500 PANTHER PTHR23501 19 498 3.7E-110 T 23-04-2016 LT40_RS00210 e14380baa951a18344710b0c1feec756 500 Gene3D G3DSA:1.20.1250.20 266 429 2.5E-8 T 23-04-2016 LT40_RS12850 c0b63cc10c8836e8f76bd002738c1238 964 Gene3D G3DSA:3.30.1330.60 909 938 2.5E-8 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS12850 c0b63cc10c8836e8f76bd002738c1238 964 Gene3D G3DSA:3.30.1330.60 779 823 2.5E-8 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS12850 c0b63cc10c8836e8f76bd002738c1238 964 PANTHER PTHR30441:SF2 1 743 1.6E-105 T 23-04-2016 LT40_RS12850 c0b63cc10c8836e8f76bd002738c1238 964 PANTHER PTHR30441:SF2 797 869 1.6E-105 T 23-04-2016 LT40_RS12850 c0b63cc10c8836e8f76bd002738c1238 964 PANTHER PTHR30441 1 743 1.6E-105 T 23-04-2016 LT40_RS12850 c0b63cc10c8836e8f76bd002738c1238 964 PANTHER PTHR30441 797 869 1.6E-105 T 23-04-2016 LT40_RS12850 c0b63cc10c8836e8f76bd002738c1238 964 Pfam PF05359 Domain of Unknown Function (DUF748) 352 502 7.6E-35 T 23-04-2016 IPR008023 Protein of unknown function DUF748 LT40_RS12850 c0b63cc10c8836e8f76bd002738c1238 964 Pfam PF05359 Domain of Unknown Function (DUF748) 567 711 2.7E-40 T 23-04-2016 IPR008023 Protein of unknown function DUF748 LT40_RS12850 c0b63cc10c8836e8f76bd002738c1238 964 Pfam PF05359 Domain of Unknown Function (DUF748) 141 291 2.4E-28 T 23-04-2016 IPR008023 Protein of unknown function DUF748 LT40_RS20945 2feb0463ac00db2d8e526dc2963e798f 108 Pfam PF11776 Nickel/cobalt transporter regulator 49 97 2.2E-10 T 23-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB LT40_RS20945 2feb0463ac00db2d8e526dc2963e798f 108 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 35 99 7.0E-10 T 23-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB LT40_RS03500 b55f8c6ff551bb12b89af2c1e905205d 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 8.5E-54 T 23-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 LT40_RS03500 b55f8c6ff551bb12b89af2c1e905205d 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 6.4E-36 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 LT40_RS03500 b55f8c6ff551bb12b89af2c1e905205d 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site LT40_RS03500 b55f8c6ff551bb12b89af2c1e905205d 107 SUPERFAMILY SSF89360 1 96 2.22E-31 T 23-04-2016 IPR000361 FeS cluster biogenesis LT40_RS03500 b55f8c6ff551bb12b89af2c1e905205d 107 PANTHER PTHR10072 1 107 1.2E-49 T 23-04-2016 LT40_RS03500 b55f8c6ff551bb12b89af2c1e905205d 107 PANTHER PTHR10072:SF48 1 107 1.2E-49 T 23-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 LT40_RS03500 b55f8c6ff551bb12b89af2c1e905205d 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.9E-25 T 23-04-2016 IPR000361 FeS cluster biogenesis LT40_RS03500 b55f8c6ff551bb12b89af2c1e905205d 107 Gene3D G3DSA:2.60.300.12 2 96 2.5E-34 T 23-04-2016 IPR000361 FeS cluster biogenesis LT40_RS15620 2191a58f7ff55ddfab2f688bada92b09 346 Pfam PF11141 Protein of unknown function (DUF2914) 267 332 1.1E-24 T 23-04-2016 IPR022606 Protein of unknown function DUF2914 LT40_RS15620 2191a58f7ff55ddfab2f688bada92b09 346 PIRSF PIRSF029727 2 345 7.5E-172 T 23-04-2016 IPR016937 Uncharacterised conserved protein UCP029727 LT40_RS00695 af141289279da89067ac2c5cb16a9765 60 PANTHER PTHR35534 1 60 1.8E-29 T 23-04-2016 LT40_RS00695 af141289279da89067ac2c5cb16a9765 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.676 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 LT40_RS00695 af141289279da89067ac2c5cb16a9765 60 SUPERFAMILY SSF57829 2 55 8.55E-18 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 LT40_RS00695 af141289279da89067ac2c5cb16a9765 60 Pfam PF01783 Ribosomal L32p protein family 2 56 1.6E-20 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 LT40_RS00695 af141289279da89067ac2c5cb16a9765 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.8E-19 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 LT40_RS12915 1c9feae8373b930597ec46bc357e4dcb 251 Pfam PF00121 Triosephosphate isomerase 5 246 1.2E-85 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LT40_RS12915 1c9feae8373b930597ec46bc357e4dcb 251 PANTHER PTHR21139 1 249 6.0E-118 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LT40_RS12915 1c9feae8373b930597ec46bc357e4dcb 251 SUPERFAMILY SSF51351 1 248 9.42E-87 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LT40_RS12915 1c9feae8373b930597ec46bc357e4dcb 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 2.6E-63 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LT40_RS12915 1c9feae8373b930597ec46bc357e4dcb 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 39.503 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LT40_RS12915 1c9feae8373b930597ec46bc357e4dcb 251 Gene3D G3DSA:3.20.20.70 1 249 1.7E-95 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS12915 1c9feae8373b930597ec46bc357e4dcb 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 LT40_RS18095 985ace64027ed9acd2271100d431c2f2 920 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 17 895 21.096 T 23-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 LT40_RS18095 985ace64027ed9acd2271100d431c2f2 920 PANTHER PTHR30189 147 513 1.4E-95 T 23-04-2016 LT40_RS18095 985ace64027ed9acd2271100d431c2f2 920 PANTHER PTHR30189 533 913 1.4E-95 T 23-04-2016 LT40_RS18095 985ace64027ed9acd2271100d431c2f2 920 Pfam PF04453 Organic solvent tolerance protein 396 826 1.2E-120 T 23-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 LT40_RS18095 985ace64027ed9acd2271100d431c2f2 920 Gene3D G3DSA:2.60.450.10 143 297 1.5E-18 T 23-04-2016 LT40_RS18095 985ace64027ed9acd2271100d431c2f2 920 Pfam PF03968 OstA-like protein 152 284 3.6E-13 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal LT40_RS07455 2365865541040248bb1d8c5ae7f82d82 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 316 2.9E-47 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS07455 2365865541040248bb1d8c5ae7f82d82 330 PANTHER PTHR32196 25 329 2.3E-111 T 23-04-2016 LT40_RS07455 2365865541040248bb1d8c5ae7f82d82 330 PANTHER PTHR32196:SF35 25 329 2.3E-111 T 23-04-2016 LT40_RS05300 641c2644de0f305d42372e8f05e0a491 145 SUPERFAMILY SSF54637 3 140 1.7E-38 T 23-04-2016 IPR029069 HotDog domain LT40_RS05300 641c2644de0f305d42372e8f05e0a491 145 Pfam PF13279 Thioesterase-like superfamily 15 134 1.5E-11 T 23-04-2016 LT40_RS05300 641c2644de0f305d42372e8f05e0a491 145 PANTHER PTHR31793:SF6 8 144 3.1E-64 T 23-04-2016 LT40_RS05300 641c2644de0f305d42372e8f05e0a491 145 PANTHER PTHR31793 8 144 3.1E-64 T 23-04-2016 LT40_RS05300 641c2644de0f305d42372e8f05e0a491 145 Gene3D G3DSA:3.10.129.10 8 139 3.2E-35 T 23-04-2016 IPR029069 HotDog domain LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 360 382 8.1E-8 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 419 441 8.1E-8 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 60 84 8.1E-8 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 8.1E-8 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 Pfam PF00361 Proton-conducting membrane transporter 136 427 3.0E-89 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 1.1E-21 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PANTHER PTHR22773 1 570 1.3E-225 T 23-04-2016 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 612 1.6E-232 T 23-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PANTHER PTHR22773:SF50 1 570 1.3E-225 T 23-04-2016 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 5.7E-55 T 23-04-2016 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 249 275 5.7E-55 T 23-04-2016 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 5.7E-55 T 23-04-2016 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 227 248 5.7E-55 T 23-04-2016 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 317 329 5.7E-55 T 23-04-2016 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 5.7E-55 T 23-04-2016 LT40_RS11405 df9c0c11d9dbc2e9b4d4dcb84ff4a229 617 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 5.7E-55 T 23-04-2016 LT40_RS11150 32ee21256b75a61a355f180a0472a9fd 273 SUPERFAMILY SSF51430 8 262 2.36E-76 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS11150 32ee21256b75a61a355f180a0472a9fd 273 PANTHER PTHR11732:SF98 1 273 9.4E-106 T 23-04-2016 LT40_RS11150 32ee21256b75a61a355f180a0472a9fd 273 Pfam PF00248 Aldo/keto reductase family 13 260 8.1E-54 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS11150 32ee21256b75a61a355f180a0472a9fd 273 PRINTS PR00069 Aldo-keto reductase signature 94 112 8.1E-18 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS11150 32ee21256b75a61a355f180a0472a9fd 273 PRINTS PR00069 Aldo-keto reductase signature 124 141 8.1E-18 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS11150 32ee21256b75a61a355f180a0472a9fd 273 PRINTS PR00069 Aldo-keto reductase signature 195 219 8.1E-18 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS11150 32ee21256b75a61a355f180a0472a9fd 273 PANTHER PTHR11732 1 273 9.4E-106 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS11150 32ee21256b75a61a355f180a0472a9fd 273 Gene3D G3DSA:3.20.20.100 8 263 3.1E-75 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS02460 f186c725eee9e2e2b6e97b13fad8a42b 156 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 77 146 1.6E-23 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) LT40_RS02460 f186c725eee9e2e2b6e97b13fad8a42b 156 PANTHER PTHR22617 75 155 3.1E-30 T 23-04-2016 LT40_RS02460 f186c725eee9e2e2b6e97b13fad8a42b 156 SUPERFAMILY SSF101801 73 154 1.44E-24 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) LT40_RS02460 f186c725eee9e2e2b6e97b13fad8a42b 156 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 73 148 3.6E-32 T 23-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 LT40_RS02460 f186c725eee9e2e2b6e97b13fad8a42b 156 PRINTS PR00956 Flagellar motor switch protein FliN signature 76 92 3.2E-27 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LT40_RS02460 f186c725eee9e2e2b6e97b13fad8a42b 156 PRINTS PR00956 Flagellar motor switch protein FliN signature 109 122 3.2E-27 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LT40_RS02460 f186c725eee9e2e2b6e97b13fad8a42b 156 PRINTS PR00956 Flagellar motor switch protein FliN signature 122 137 3.2E-27 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LT40_RS02460 f186c725eee9e2e2b6e97b13fad8a42b 156 PRINTS PR00956 Flagellar motor switch protein FliN signature 93 109 3.2E-27 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LT40_RS02460 f186c725eee9e2e2b6e97b13fad8a42b 156 Gene3D G3DSA:2.30.330.10 72 156 2.5E-36 T 23-04-2016 LT40_RS17615 fb533a0564fc277dd90c21be17f7f10a 481 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 7 451 1.5E-151 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 LT40_RS17615 fb533a0564fc277dd90c21be17f7f10a 481 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 467 46.897 T 23-04-2016 IPR003846 Uncharacterised protein family UPF0061 LT40_RS17615 fb533a0564fc277dd90c21be17f7f10a 481 PANTHER PTHR32057 4 481 8.4E-199 T 23-04-2016 LT40_RS10745 6f4352742ff694836277de3f8fd8165e 483 Gene3D G3DSA:3.30.750.24 388 476 4.1E-8 T 23-04-2016 IPR002645 STAS domain LT40_RS10745 6f4352742ff694836277de3f8fd8165e 483 SUPERFAMILY SSF52091 388 477 1.65E-11 T 23-04-2016 IPR002645 STAS domain LT40_RS10745 6f4352742ff694836277de3f8fd8165e 483 PANTHER PTHR11814 6 475 2.6E-153 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 LT40_RS10745 6f4352742ff694836277de3f8fd8165e 483 Pfam PF00916 Sulfate permease family 7 354 8.9E-51 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 LT40_RS10745 6f4352742ff694836277de3f8fd8165e 483 PANTHER PTHR11814:SF76 6 475 2.6E-153 T 23-04-2016 LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 Hamap MF_01151 Protein GrpE [grpE]. 2 175 20.219 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 ProSitePatterns PS01071 grpE protein signature. 130 173 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 Gene3D G3DSA:2.30.22.10 120 176 2.7E-26 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 Gene3D G3DSA:3.90.20.20 21 117 1.6E-29 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 Pfam PF01025 GrpE 14 175 1.2E-50 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 PANTHER PTHR21237 1 178 1.3E-58 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 SUPERFAMILY SSF51064 120 175 2.62E-18 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 SUPERFAMILY SSF58014 23 118 4.05E-26 T 23-04-2016 LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 PRINTS PR00773 GrpE protein signature 44 60 1.7E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 PRINTS PR00773 GrpE protein signature 72 87 1.7E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 PRINTS PR00773 GrpE protein signature 154 173 1.7E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LT40_RS12980 0c355e1926efb561bfa3b48b79d8a9d4 188 PRINTS PR00773 GrpE protein signature 127 142 1.7E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 LT40_RS18580 1ded040fec82a6ffc3729720c3f5bf7d 363 Pfam PF00925 GTP cyclohydrolase II 208 361 1.1E-31 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LT40_RS18580 1ded040fec82a6ffc3729720c3f5bf7d 363 PIRSF PIRSF001259 2 363 1.8E-116 T 23-04-2016 LT40_RS18580 1ded040fec82a6ffc3729720c3f5bf7d 363 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 2.5E-81 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18580 1ded040fec82a6ffc3729720c3f5bf7d 363 Gene3D G3DSA:3.90.870.10 2 211 1.2E-96 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LT40_RS18580 1ded040fec82a6ffc3729720c3f5bf7d 363 SUPERFAMILY SSF55821 3 203 2.17E-84 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain LT40_RS18580 1ded040fec82a6ffc3729720c3f5bf7d 363 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 199 2.8E-72 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18580 1ded040fec82a6ffc3729720c3f5bf7d 363 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.729 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 LT40_RS18580 1ded040fec82a6ffc3729720c3f5bf7d 363 SUPERFAMILY SSF142695 204 361 4.71E-42 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LT40_RS18580 1ded040fec82a6ffc3729720c3f5bf7d 363 PANTHER PTHR21327 1 361 1.9E-146 T 23-04-2016 LT40_RS18580 1ded040fec82a6ffc3729720c3f5bf7d 363 PANTHER PTHR21327:SF6 1 361 1.9E-146 T 23-04-2016 LT40_RS17030 035f89da3b313daf35e9ff035c4ec815 454 PANTHER PTHR11986 34 453 2.7E-166 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS17030 035f89da3b313daf35e9ff035c4ec815 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS17030 035f89da3b313daf35e9ff035c4ec815 454 Pfam PF00202 Aminotransferase class-III 34 441 4.0E-106 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS17030 035f89da3b313daf35e9ff035c4ec815 454 Gene3D G3DSA:3.90.1150.10 345 447 1.2E-49 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS17030 035f89da3b313daf35e9ff035c4ec815 454 Gene3D G3DSA:3.90.1150.10 8 69 1.2E-49 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS17030 035f89da3b313daf35e9ff035c4ec815 454 SUPERFAMILY SSF53383 11 442 1.31E-125 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS17030 035f89da3b313daf35e9ff035c4ec815 454 Gene3D G3DSA:3.40.640.10 70 343 3.7E-81 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS17030 035f89da3b313daf35e9ff035c4ec815 454 PANTHER PTHR11986:SF81 34 453 2.7E-166 T 23-04-2016 LT40_RS19065 922914f5a605535bffef633d002e077c 240 Pfam PF00440 Bacterial regulatory proteins, tetR family 49 94 6.1E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS19065 922914f5a605535bffef633d002e077c 240 PANTHER PTHR30055:SF53 32 200 1.1E-46 T 23-04-2016 LT40_RS19065 922914f5a605535bffef633d002e077c 240 Gene3D G3DSA:1.10.10.60 37 79 9.4E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS19065 922914f5a605535bffef633d002e077c 240 PANTHER PTHR30055 32 200 1.1E-46 T 23-04-2016 LT40_RS19065 922914f5a605535bffef633d002e077c 240 SUPERFAMILY SSF46689 39 116 6.67E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS19065 922914f5a605535bffef633d002e077c 240 Gene3D G3DSA:1.10.10.60 80 102 6.6E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS19065 922914f5a605535bffef633d002e077c 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 62 4.8E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS19065 922914f5a605535bffef633d002e077c 240 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 70 93 4.8E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS19065 922914f5a605535bffef633d002e077c 240 Pfam PF08362 YcdC-like protein, C-terminal region 96 238 2.6E-55 T 23-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 LT40_RS19065 922914f5a605535bffef633d002e077c 240 SUPERFAMILY SSF48498 113 238 1.97E-40 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LT40_RS19065 922914f5a605535bffef633d002e077c 240 Gene3D G3DSA:1.10.357.10 103 238 1.4E-55 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS14775 53b455062a36194bd83df29bfa71a760 421 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 9 115 5.7E-11 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 LT40_RS14775 53b455062a36194bd83df29bfa71a760 421 PANTHER PTHR37419 72 349 1.7E-13 T 23-04-2016 LT40_RS14775 53b455062a36194bd83df29bfa71a760 421 Pfam PF07805 HipA-like N-terminal domain 151 242 1.2E-17 T 23-04-2016 IPR012894 HipA, N-terminal subdomain 2 LT40_RS14775 53b455062a36194bd83df29bfa71a760 421 Pfam PF13657 HipA N-terminal domain 10 116 2.2E-14 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 LT40_RS14775 53b455062a36194bd83df29bfa71a760 421 Pfam PF07804 HipA-like C-terminal domain 248 394 3.5E-28 T 23-04-2016 IPR012893 HipA-like, C-terminal LT40_RS19210 2c004f4b0dc1def6e6f73034c7e9d86c 350 PANTHER PTHR22604:SF123 2 342 3.7E-87 T 23-04-2016 LT40_RS19210 2c004f4b0dc1def6e6f73034c7e9d86c 350 SUPERFAMILY SSF55347 126 314 2.78E-29 T 23-04-2016 LT40_RS19210 2c004f4b0dc1def6e6f73034c7e9d86c 350 Gene3D G3DSA:3.30.360.10 139 343 1.2E-38 T 23-04-2016 LT40_RS19210 2c004f4b0dc1def6e6f73034c7e9d86c 350 SUPERFAMILY SSF51735 3 153 3.88E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19210 2c004f4b0dc1def6e6f73034c7e9d86c 350 PANTHER PTHR22604 2 342 3.7E-87 T 23-04-2016 LT40_RS19210 2c004f4b0dc1def6e6f73034c7e9d86c 350 Gene3D G3DSA:3.40.50.720 3 138 8.4E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19210 2c004f4b0dc1def6e6f73034c7e9d86c 350 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 233 5.0E-9 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LT40_RS19210 2c004f4b0dc1def6e6f73034c7e9d86c 350 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 122 9.7E-25 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LT40_RS15890 4fadbc60457ba870c267cd9dc9b01182 107 Pfam PF05957 Bacterial protein of unknown function (DUF883) 12 105 9.5E-22 T 23-04-2016 IPR010279 Protein of unknown function DUF883, ElaB LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 SUPERFAMILY SSF51419 8 233 3.27E-74 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 Hamap MF_01201 Alanine racemase. 1 355 35.659 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 2.5E-73 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 23-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 Pfam PF00842 Alanine racemase, C-terminal domain 232 353 8.8E-37 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 Gene3D G3DSA:3.20.20.10 10 211 4.7E-74 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 PANTHER PTHR30511:SF0 1 355 2.9E-154 T 23-04-2016 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 PANTHER PTHR30511 1 355 2.9E-154 T 23-04-2016 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 SMART SM01005 232 355 7.4E-65 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 SUPERFAMILY SSF50621 228 349 9.07E-45 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 TIGRFAM TIGR00492 alr: alanine racemase 3 355 6.3E-113 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 PRINTS PR00992 Alanine racemase signature 338 351 2.3E-64 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 PRINTS PR00992 Alanine racemase signature 191 218 2.3E-64 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 PRINTS PR00992 Alanine racemase signature 25 41 2.3E-64 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 PRINTS PR00992 Alanine racemase signature 120 132 2.3E-64 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 PRINTS PR00992 Alanine racemase signature 154 165 2.3E-64 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 PRINTS PR00992 Alanine racemase signature 286 303 2.3E-64 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 PRINTS PR00992 Alanine racemase signature 60 78 2.3E-64 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 PRINTS PR00992 Alanine racemase signature 248 263 2.3E-64 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 PRINTS PR00992 Alanine racemase signature 265 280 2.3E-64 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 LT40_RS16605 b12242c7367d7f4480b24d7b3d0eee30 355 Gene3D G3DSA:2.40.37.10 212 355 1.7E-54 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 PRINTS PR00046 Major sigma-70 factor signature 404 417 6.4E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 PRINTS PR00046 Major sigma-70 factor signature 573 588 6.4E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 PRINTS PR00046 Major sigma-70 factor signature 552 564 6.4E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 PRINTS PR00046 Major sigma-70 factor signature 588 599 6.4E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 PRINTS PR00046 Major sigma-70 factor signature 428 436 6.4E-31 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 Gene3D G3DSA:1.10.10.10 543 613 4.8E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 573 599 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 SUPERFAMILY SSF88659 453 526 1.57E-20 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 376 612 1.6E-121 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 404 417 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 Pfam PF04546 Sigma-70, non-essential region 139 349 6.0E-60 T 23-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 Gene3D G3DSA:1.10.601.10 112 449 3.2E-135 T 23-04-2016 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 Pfam PF04539 Sigma-70 region 3 459 534 1.5E-29 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 Pfam PF04542 Sigma-70 region 2 380 449 1.7E-21 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 3.8E-13 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 PANTHER PTHR30603 327 613 2.8E-255 T 23-04-2016 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 PANTHER PTHR30603 7 152 2.8E-255 T 23-04-2016 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 PANTHER PTHR30603:SF0 327 613 2.8E-255 T 23-04-2016 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 PANTHER PTHR30603:SF0 7 152 2.8E-255 T 23-04-2016 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 613 46.895 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 SUPERFAMILY SSF88946 115 447 6.41E-100 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 SUPERFAMILY SSF88659 510 612 1.08E-26 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 Pfam PF04545 Sigma-70, region 4 548 601 1.8E-18 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 376 601 1.7E-36 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 Pfam PF03979 Sigma-70 factor, region 1.1 6 83 3.4E-30 T 23-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 LT40_RS18010 1721ee1faba58defb5562215b417c2b9 614 Gene3D G3DSA:1.10.10.10 453 504 1.9E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17045 f6e41b7c5b53ac2f73e393c48bea45ba 380 Pfam PF08402 TOBE domain 300 378 1.2E-16 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LT40_RS17045 f6e41b7c5b53ac2f73e393c48bea45ba 380 SUPERFAMILY SSF52540 22 263 8.44E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17045 f6e41b7c5b53ac2f73e393c48bea45ba 380 Gene3D G3DSA:3.40.50.300 16 256 3.4E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17045 f6e41b7c5b53ac2f73e393c48bea45ba 380 PANTHER PTHR24220 24 321 2.8E-188 T 23-04-2016 LT40_RS17045 f6e41b7c5b53ac2f73e393c48bea45ba 380 Pfam PF00005 ABC transporter 39 180 1.4E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS17045 f6e41b7c5b53ac2f73e393c48bea45ba 380 SUPERFAMILY SSF50331 255 378 1.08E-16 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS17045 f6e41b7c5b53ac2f73e393c48bea45ba 380 SMART SM00382 47 235 6.4E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS17045 f6e41b7c5b53ac2f73e393c48bea45ba 380 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 53 378 1.1E-129 T 23-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 LT40_RS17045 f6e41b7c5b53ac2f73e393c48bea45ba 380 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS17045 f6e41b7c5b53ac2f73e393c48bea45ba 380 PANTHER PTHR24220:SF481 24 321 2.8E-188 T 23-04-2016 LT40_RS05185 2f5f7d2cad33fb45f79b66ed4bae6b35 552 Pfam PF00474 Sodium:solute symporter family 65 471 1.6E-127 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS05185 2f5f7d2cad33fb45f79b66ed4bae6b35 552 PANTHER PTHR11819 34 541 1.5E-289 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS05185 2f5f7d2cad33fb45f79b66ed4bae6b35 552 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 180 205 - T 23-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LT40_RS05185 2f5f7d2cad33fb45f79b66ed4bae6b35 552 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 453 473 - T 23-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 LT40_RS05185 2f5f7d2cad33fb45f79b66ed4bae6b35 552 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 65 470 2.0E-62 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS05185 2f5f7d2cad33fb45f79b66ed4bae6b35 552 PANTHER PTHR11819:SF13 34 541 1.5E-289 T 23-04-2016 LT40_RS18735 3fb56487c8206ac30a18b6efbcbd2fa9 506 PANTHER PTHR11699:SF97 1 506 0.0 T 23-04-2016 LT40_RS18735 3fb56487c8206ac30a18b6efbcbd2fa9 506 Pfam PF00171 Aldehyde dehydrogenase family 34 493 1.0E-164 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS18735 3fb56487c8206ac30a18b6efbcbd2fa9 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS18735 3fb56487c8206ac30a18b6efbcbd2fa9 506 Gene3D G3DSA:3.40.605.10 18 269 2.2E-92 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS18735 3fb56487c8206ac30a18b6efbcbd2fa9 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS18735 3fb56487c8206ac30a18b6efbcbd2fa9 506 SUPERFAMILY SSF53720 15 497 5.5E-163 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS18735 3fb56487c8206ac30a18b6efbcbd2fa9 506 Gene3D G3DSA:3.40.309.10 270 469 5.3E-64 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS18735 3fb56487c8206ac30a18b6efbcbd2fa9 506 PANTHER PTHR11699 1 506 0.0 T 23-04-2016 LT40_RS05780 995867d295b4ed4c65e59fa7d6f08e12 145 PANTHER PTHR38102 2 145 3.7E-18 T 23-04-2016 LT40_RS05780 995867d295b4ed4c65e59fa7d6f08e12 145 Pfam PF07813 LTXXQ motif family protein 41 118 4.1E-6 T 23-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 LT40_RS15295 d2acd2cda1f0f1cd37e9dce2dcba94da 452 SUPERFAMILY SSF51679 3 437 2.62E-128 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS15295 d2acd2cda1f0f1cd37e9dce2dcba94da 452 PIRSF PIRSF000337 3 445 5.1E-141 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LT40_RS15295 d2acd2cda1f0f1cd37e9dce2dcba94da 452 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 431 4.0E-167 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LT40_RS15295 d2acd2cda1f0f1cd37e9dce2dcba94da 452 PANTHER PTHR30011:SF16 1 450 6.9E-237 T 23-04-2016 LT40_RS15295 d2acd2cda1f0f1cd37e9dce2dcba94da 452 Gene3D G3DSA:3.20.20.30 2 316 1.2E-137 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS15295 d2acd2cda1f0f1cd37e9dce2dcba94da 452 Gene3D G3DSA:3.20.20.30 349 437 1.2E-137 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS15295 d2acd2cda1f0f1cd37e9dce2dcba94da 452 PANTHER PTHR30011 1 450 6.9E-237 T 23-04-2016 LT40_RS15295 d2acd2cda1f0f1cd37e9dce2dcba94da 452 Pfam PF00296 Luciferase-like monooxygenase 26 389 2.7E-64 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS16990 e48dd7261a6ff0bbaa4628aab2d2909f 212 SUPERFAMILY SSF52833 3 209 1.43E-69 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS16990 e48dd7261a6ff0bbaa4628aab2d2909f 212 Gene3D G3DSA:3.30.1020.10 158 211 3.3E-30 T 23-04-2016 LT40_RS16990 e48dd7261a6ff0bbaa4628aab2d2909f 212 PANTHER PTHR10681:SF99 3 207 1.0E-91 T 23-04-2016 LT40_RS16990 e48dd7261a6ff0bbaa4628aab2d2909f 212 PIRSF PIRSF000239 1 209 2.1E-78 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 LT40_RS16990 e48dd7261a6ff0bbaa4628aab2d2909f 212 Pfam PF00578 AhpC/TSA family 6 134 1.2E-30 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS16990 e48dd7261a6ff0bbaa4628aab2d2909f 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 196 5.6E-12 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS16990 e48dd7261a6ff0bbaa4628aab2d2909f 212 PANTHER PTHR10681 3 207 1.0E-91 T 23-04-2016 LT40_RS16990 e48dd7261a6ff0bbaa4628aab2d2909f 212 Gene3D G3DSA:3.40.30.10 4 157 3.2E-61 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS05660 c5b7be35f86b4f825a45a5f90c38cb61 117 PANTHER PTHR30041:SF4 1 116 2.9E-57 T 23-04-2016 LT40_RS05660 c5b7be35f86b4f825a45a5f90c38cb61 117 Pfam PF03960 ArsC family 7 115 1.5E-19 T 23-04-2016 IPR006660 Arsenate reductase-like LT40_RS05660 c5b7be35f86b4f825a45a5f90c38cb61 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 116 5.5E-44 T 23-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 LT40_RS05660 c5b7be35f86b4f825a45a5f90c38cb61 117 PANTHER PTHR30041 1 116 2.9E-57 T 23-04-2016 LT40_RS05660 c5b7be35f86b4f825a45a5f90c38cb61 117 Gene3D G3DSA:3.40.30.10 1 116 9.9E-49 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS05660 c5b7be35f86b4f825a45a5f90c38cb61 117 SUPERFAMILY SSF52833 4 116 1.68E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS17315 f9fe5b4d4a541c2f07c75cc566d7ec9e 135 Pfam PF06476 Protein of unknown function (DUF1090) 24 128 8.5E-36 T 23-04-2016 IPR009468 Protein of unknown function DUF1090 LT40_RS00535 acc7d3fb8f1ac913ab2b7bc3588a7e90 280 Pfam PF00756 Putative esterase 23 273 3.8E-66 T 23-04-2016 IPR000801 Putative esterase LT40_RS00535 acc7d3fb8f1ac913ab2b7bc3588a7e90 280 Gene3D G3DSA:3.40.50.1820 3 279 3.7E-82 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS00535 acc7d3fb8f1ac913ab2b7bc3588a7e90 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 279 2.1E-125 T 23-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 LT40_RS00535 acc7d3fb8f1ac913ab2b7bc3588a7e90 280 PANTHER PTHR10061 2 280 3.7E-176 T 23-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 LT40_RS00535 acc7d3fb8f1ac913ab2b7bc3588a7e90 280 SUPERFAMILY SSF53474 3 280 8.69E-96 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS15215 093fa1e3fe866d652d26267552389be6 234 Gene3D G3DSA:3.40.50.1000 5 226 2.0E-27 T 23-04-2016 IPR023214 HAD-like domain LT40_RS15215 093fa1e3fe866d652d26267552389be6 234 PANTHER PTHR12725:SF62 1 233 6.7E-54 T 23-04-2016 LT40_RS15215 093fa1e3fe866d652d26267552389be6 234 PANTHER PTHR12725 1 233 6.7E-54 T 23-04-2016 LT40_RS15215 093fa1e3fe866d652d26267552389be6 234 SUPERFAMILY SSF56784 6 230 1.16E-35 T 23-04-2016 IPR023214 HAD-like domain LT40_RS15215 093fa1e3fe866d652d26267552389be6 234 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 8 184 1.3E-21 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS15215 093fa1e3fe866d652d26267552389be6 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 195 2.6E-8 T 23-04-2016 IPR023214 HAD-like domain LT40_RS15590 25b3c06f10d66c99a59378c5a91d55c0 95 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 5 95 7.3E-31 T 23-04-2016 IPR012661 Conserved hypothetical protein CHP02448 LT40_RS15590 25b3c06f10d66c99a59378c5a91d55c0 95 Pfam PF09498 Protein of unknown function (DUF2388) 27 94 5.2E-29 T 23-04-2016 IPR012661 Conserved hypothetical protein CHP02448 LT40_RS17585 4550d532e2cdd3448707ab0c60279387 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 4.3E-141 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS17585 4550d532e2cdd3448707ab0c60279387 354 PANTHER PTHR21091 1 351 3.2E-155 T 23-04-2016 LT40_RS17585 4550d532e2cdd3448707ab0c60279387 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 1.0E-134 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS17585 4550d532e2cdd3448707ab0c60279387 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS17585 4550d532e2cdd3448707ab0c60279387 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.618 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS17585 4550d532e2cdd3448707ab0c60279387 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS17585 4550d532e2cdd3448707ab0c60279387 354 Gene3D G3DSA:3.20.20.210 3 352 8.6E-156 T 23-04-2016 LT40_RS17585 4550d532e2cdd3448707ab0c60279387 354 PANTHER PTHR21091:SF2 1 351 3.2E-155 T 23-04-2016 LT40_RS17585 4550d532e2cdd3448707ab0c60279387 354 SUPERFAMILY SSF51726 1 353 1.92E-124 T 23-04-2016 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 SUPERFAMILY SSF53850 95 280 3.15E-61 T 23-04-2016 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 PANTHER PTHR21022 5 360 1.5E-135 T 23-04-2016 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 Pfam PF01842 ACT domain 282 346 2.8E-10 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 SUPERFAMILY SSF55021 266 361 1.59E-27 T 23-04-2016 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 Gene3D G3DSA:3.30.70.260 275 362 1.5E-30 T 23-04-2016 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 Gene3D G3DSA:3.40.190.10 180 259 7.7E-30 T 23-04-2016 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 PIRSF PIRSF001500 1 364 7.1E-145 T 23-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 309 316 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 Pfam PF01817 Chorismate mutase type II 10 91 8.8E-22 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 Gene3D G3DSA:3.40.190.10 93 179 8.4E-31 T 23-04-2016 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 PANTHER PTHR21022:SF0 5 360 1.5E-135 T 23-04-2016 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 Pfam PF00800 Prephenate dehydratase 96 273 9.1E-62 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 SUPERFAMILY SSF48600 5 98 4.43E-18 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 247 269 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 SMART SM00830 10 94 2.3E-27 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 TIGRFAM TIGR01807 CM_P2: chorismate mutase 6 84 6.2E-31 T 23-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 LT40_RS06150 5681659fbc676bc8c3789e84f92f3c0d 364 Gene3D G3DSA:1.20.59.10 2 92 8.7E-21 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS01915 bc7ca696b48916091e9cec50fae8c8cf 331 SUPERFAMILY SSF144083 266 328 9.68E-17 T 23-04-2016 LT40_RS01915 bc7ca696b48916091e9cec50fae8c8cf 331 Gene3D G3DSA:1.20.58.340 256 331 2.8E-24 T 23-04-2016 LT40_RS01915 bc7ca696b48916091e9cec50fae8c8cf 331 SUPERFAMILY SSF143865 8 258 2.48E-46 T 23-04-2016 LT40_RS01915 bc7ca696b48916091e9cec50fae8c8cf 331 Pfam PF01544 CorA-like Mg2+ transporter protein 40 327 2.8E-66 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 LT40_RS01915 bc7ca696b48916091e9cec50fae8c8cf 331 PANTHER PTHR21535 83 331 2.0E-36 T 23-04-2016 LT40_RS01915 bc7ca696b48916091e9cec50fae8c8cf 331 Gene3D G3DSA:1.20.58.340 145 252 9.8E-11 T 23-04-2016 LT40_RS13905 7eb6ea84df83b1ef2b77d3288a95e22a 344 PANTHER PTHR30329:SF2 1 300 1.3E-118 T 23-04-2016 LT40_RS13905 7eb6ea84df83b1ef2b77d3288a95e22a 344 PANTHER PTHR30329 1 300 1.3E-118 T 23-04-2016 LT40_RS13905 7eb6ea84df83b1ef2b77d3288a95e22a 344 Pfam PF00691 OmpA family 171 263 4.8E-14 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS13905 7eb6ea84df83b1ef2b77d3288a95e22a 344 SUPERFAMILY SSF103088 169 276 1.83E-21 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS13905 7eb6ea84df83b1ef2b77d3288a95e22a 344 Gene3D G3DSA:3.30.1330.60 167 276 5.6E-19 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS13905 7eb6ea84df83b1ef2b77d3288a95e22a 344 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 16 63 2.7E-16 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain LT40_RS01215 afe6c37b88dae9563ef5c9abd595c87a 304 PANTHER PTHR30085:SF2 6 301 2.5E-134 T 23-04-2016 LT40_RS01215 afe6c37b88dae9563ef5c9abd595c87a 304 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 269 3.5E-51 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS01215 afe6c37b88dae9563ef5c9abd595c87a 304 Gene3D G3DSA:3.40.190.10 124 231 1.5E-33 T 23-04-2016 LT40_RS01215 afe6c37b88dae9563ef5c9abd595c87a 304 PANTHER PTHR30085 6 301 2.5E-134 T 23-04-2016 LT40_RS01215 afe6c37b88dae9563ef5c9abd595c87a 304 Gene3D G3DSA:3.40.190.10 232 273 6.0E-28 T 23-04-2016 LT40_RS01215 afe6c37b88dae9563ef5c9abd595c87a 304 Gene3D G3DSA:3.40.190.10 35 123 6.0E-28 T 23-04-2016 LT40_RS01215 afe6c37b88dae9563ef5c9abd595c87a 304 SMART SM00062 38 271 9.3E-59 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS01215 afe6c37b88dae9563ef5c9abd595c87a 304 SUPERFAMILY SSF53850 7 272 1.63E-65 T 23-04-2016 LT40_RS16505 35816f1dae23e288d3df22776f7910c6 259 SUPERFAMILY SSF56219 1 254 1.31E-52 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS16505 35816f1dae23e288d3df22776f7910c6 259 PANTHER PTHR22748 1 257 2.4E-64 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 LT40_RS16505 35816f1dae23e288d3df22776f7910c6 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 2.8E-58 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 LT40_RS16505 35816f1dae23e288d3df22776f7910c6 259 Gene3D G3DSA:3.60.10.10 1 254 7.6E-65 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS16505 35816f1dae23e288d3df22776f7910c6 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 239 7.0E-10 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PANTHER PTHR24322 7 136 4.3E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PANTHER PTHR24322 152 184 4.3E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PANTHER PTHR24322:SF330 7 136 4.3E-44 T 23-04-2016 LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PANTHER PTHR24322:SF330 152 184 4.3E-44 T 23-04-2016 LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 188 3.3E-4 T 23-04-2016 LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.2E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.2E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.2E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 SUPERFAMILY SSF51735 3 246 3.45E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 Gene3D G3DSA:3.40.50.720 3 235 4.1E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 6.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 PIRSF PIRSF000126 1 255 1.7E-63 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18205 d6e7ed8537f294be78d1e2e8bf3ad34b 257 Pfam PF00106 short chain dehydrogenase 5 188 5.8E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS03650 9a2351167800a60693e9c4a20b5899d6 186 PANTHER PTHR26402:SF344 13 124 1.2E-64 T 23-04-2016 LT40_RS03650 9a2351167800a60693e9c4a20b5899d6 186 SUPERFAMILY SSF52172 14 171 9.25E-31 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS03650 9a2351167800a60693e9c4a20b5899d6 186 Gene3D G3DSA:3.40.50.2300 14 126 1.0E-29 T 23-04-2016 LT40_RS03650 9a2351167800a60693e9c4a20b5899d6 186 SMART SM00448 13 124 1.2E-20 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS03650 9a2351167800a60693e9c4a20b5899d6 186 PANTHER PTHR26402 13 124 1.2E-64 T 23-04-2016 LT40_RS03650 9a2351167800a60693e9c4a20b5899d6 186 Pfam PF02954 Bacterial regulatory protein, Fis family 148 181 2.6E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS03650 9a2351167800a60693e9c4a20b5899d6 186 Pfam PF00072 Response regulator receiver domain 16 124 6.2E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS03650 9a2351167800a60693e9c4a20b5899d6 186 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 165 185 2.9E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS03650 9a2351167800a60693e9c4a20b5899d6 186 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 148 165 2.9E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS03650 9a2351167800a60693e9c4a20b5899d6 186 Gene3D G3DSA:1.10.10.60 132 185 5.5E-29 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 SUPERFAMILY SSF52540 75 345 1.05E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 458 3.2E-255 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 SMART SM00382 140 325 2.5E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 Gene3D G3DSA:2.40.10.170 2 72 4.4E-30 T 23-04-2016 LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 PANTHER PTHR15184 1 458 0.0 T 23-04-2016 LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 PANTHER PTHR15184:SF44 1 458 0.0 T 23-04-2016 LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 Gene3D G3DSA:1.10.1140.10 343 458 9.8E-56 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 Gene3D G3DSA:3.40.50.300 74 341 3.5E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 2.3E-63 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 SUPERFAMILY SSF47917 343 457 1.2E-53 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 SUPERFAMILY SSF50615 2 72 4.71E-25 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 3.0E-21 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS16125 aae5bcf16b9dcc32b4be6ee02cc5b0da 458 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 56.341 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 PANTHER PTHR30154 1 158 1.2E-100 T 23-04-2016 LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 8.5E-19 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 8.5E-19 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 8.5E-19 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 PANTHER PTHR30154:SF19 1 158 1.2E-100 T 23-04-2016 LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 SMART SM00344 4 114 2.5E-42 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 Pfam PF01037 Lrp/AsnC ligand binding domain 70 145 2.1E-23 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 Gene3D G3DSA:3.30.70.920 57 142 2.3E-29 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 SUPERFAMILY SSF46785 3 94 5.81E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 SUPERFAMILY SSF54909 64 154 7.64E-21 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 5.7E-22 T 23-04-2016 LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 22 48 - T 23-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site LT40_RS18945 4f3561062cafbd22fd488608274f556b 159 Gene3D G3DSA:1.10.10.10 5 56 3.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 Gene3D G3DSA:3.20.20.140 6 188 1.3E-12 T 23-04-2016 LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 SUPERFAMILY SSF89550 5 83 2.94E-14 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 SUPERFAMILY SSF89550 111 189 2.94E-14 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 Pfam PF02811 PHP domain 7 124 1.1E-17 T 23-04-2016 IPR004013 PHP domain GO:0003824 LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 PANTHER PTHR32294:SF4 1 1015 0.0 T 23-04-2016 LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 SMART SM00481 6 73 5.7E-11 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 971 4.0E-166 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 Pfam PF14579 Helix-hairpin-helix motif 768 857 3.2E-21 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 5 1026 13.675 T 23-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 271 694 1.2E-143 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 PANTHER PTHR32294 1 1015 0.0 T 23-04-2016 LT40_RS09600 f2ca05362accd2385b0b6d062c789eaa 1026 Pfam PF01336 OB-fold nucleic acid binding domain 936 997 2.2E-6 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LT40_RS14500 7102989fd9e43b128cc9bac9419b79ab 431 Pfam PF01551 Peptidase family M23 331 425 7.9E-27 T 23-04-2016 IPR016047 Peptidase M23 LT40_RS14500 7102989fd9e43b128cc9bac9419b79ab 431 Gene3D G3DSA:2.70.70.10 301 430 1.9E-37 T 23-04-2016 LT40_RS14500 7102989fd9e43b128cc9bac9419b79ab 431 PANTHER PTHR21666:SF213 1 430 1.8E-107 T 23-04-2016 LT40_RS14500 7102989fd9e43b128cc9bac9419b79ab 431 SUPERFAMILY SSF51261 213 429 1.28E-48 T 23-04-2016 IPR011055 Duplicated hybrid motif LT40_RS14500 7102989fd9e43b128cc9bac9419b79ab 431 PANTHER PTHR21666 1 430 1.8E-107 T 23-04-2016 LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 PANTHER PTHR30204 1 133 9.9E-64 T 23-04-2016 LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 Pfam PF00376 MerR family regulatory protein 2 39 1.0E-16 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 PANTHER PTHR30204:SF16 1 133 9.9E-64 T 23-04-2016 LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 SMART SM00422 1 70 4.2E-31 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 SUPERFAMILY SSF46955 1 126 2.78E-40 T 23-04-2016 IPR009061 Putative DNA-binding domain LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 Gene3D G3DSA:1.10.1660.10 56 131 5.2E-32 T 23-04-2016 LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 8.4E-56 T 23-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 Pfam PF09278 MerR, DNA binding 44 108 4.7E-21 T 23-04-2016 IPR015358 Transcription regulator MerR, DNA binding LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 Gene3D G3DSA:1.10.1660.10 1 55 3.3E-26 T 23-04-2016 LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.9E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.9E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS13330 e35c8e471edaea8c451ee4e18c8f0f6b 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.9E-9 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS14055 ea817d5c9f4a995384265e35a7579a6e 97 Gene3D G3DSA:3.40.1620.10 2 42 1.2E-7 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM LT40_RS14055 ea817d5c9f4a995384265e35a7579a6e 97 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 51 8.2E-12 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM LT40_RS14055 ea817d5c9f4a995384265e35a7579a6e 97 SUPERFAMILY SSF143120 1 45 2.49E-10 T 23-04-2016 LT40_RS14055 ea817d5c9f4a995384265e35a7579a6e 97 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 41 4.2E-8 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM LT40_RS10040 ff75ed71c4c2473f8485b2de0d30c746 293 SUPERFAMILY SSF51197 13 293 3.43E-87 T 23-04-2016 LT40_RS10040 ff75ed71c4c2473f8485b2de0d30c746 293 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 15 286 2.8E-65 T 23-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 LT40_RS10040 ff75ed71c4c2473f8485b2de0d30c746 293 PANTHER PTHR30468:SF18 13 293 2.8E-160 T 23-04-2016 LT40_RS10040 ff75ed71c4c2473f8485b2de0d30c746 293 Gene3D G3DSA:3.60.130.10 9 293 2.0E-90 T 23-04-2016 LT40_RS10040 ff75ed71c4c2473f8485b2de0d30c746 293 PANTHER PTHR30468 13 293 2.8E-160 T 23-04-2016 LT40_RS10245 2f2b5ee36b1869a12de4c7f4d79ee02c 253 PANTHER PTHR31360 21 245 8.3E-114 T 23-04-2016 LT40_RS10245 2f2b5ee36b1869a12de4c7f4d79ee02c 253 PANTHER PTHR31360:SF3 21 245 8.3E-114 T 23-04-2016 LT40_RS10245 2f2b5ee36b1869a12de4c7f4d79ee02c 253 Pfam PF06884 Protein of unknown function (DUF1264) 59 223 5.0E-70 T 23-04-2016 IPR010686 Protein of unknown function DUF1264 LT40_RS05515 377c0cfc5fb351cd921c08f4146c7b9c 421 SUPERFAMILY SSF50182 188 255 6.87E-12 T 23-04-2016 IPR010920 LSM domain LT40_RS05515 377c0cfc5fb351cd921c08f4146c7b9c 421 Pfam PF00924 Mechanosensitive ion channel 149 400 3.7E-45 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LT40_RS05515 377c0cfc5fb351cd921c08f4146c7b9c 421 PANTHER PTHR30414:SF0 1 419 2.6E-188 T 23-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 LT40_RS05515 377c0cfc5fb351cd921c08f4146c7b9c 421 Gene3D G3DSA:2.30.30.60 205 255 2.1E-9 T 23-04-2016 LT40_RS05515 377c0cfc5fb351cd921c08f4146c7b9c 421 PANTHER PTHR30414 1 419 2.6E-188 T 23-04-2016 LT40_RS13555 397b3313535f0a84bbed7bc04e5bc0fc 286 Pfam PF00005 ABC transporter 61 216 2.4E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS13555 397b3313535f0a84bbed7bc04e5bc0fc 286 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 45 286 1.6E-117 T 23-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD LT40_RS13555 397b3313535f0a84bbed7bc04e5bc0fc 286 Gene3D G3DSA:3.40.50.300 44 283 4.4E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13555 397b3313535f0a84bbed7bc04e5bc0fc 286 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 264 285 5.2E-8 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LT40_RS13555 397b3313535f0a84bbed7bc04e5bc0fc 286 PANTHER PTHR24220 47 286 2.9E-142 T 23-04-2016 LT40_RS13555 397b3313535f0a84bbed7bc04e5bc0fc 286 SUPERFAMILY SSF52540 45 284 1.78E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13555 397b3313535f0a84bbed7bc04e5bc0fc 286 PANTHER PTHR24220:SF366 47 286 2.9E-142 T 23-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 PANTHER PTHR10799:SF774 747 989 4.4E-83 T 23-04-2016 LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 711 877 5.8E-40 T 23-04-2016 IPR000160 GGDEF domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SUPERFAMILY SSF55073 719 880 1.41E-48 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SUPERFAMILY SSF55785 601 711 3.14E-22 T 23-04-2016 IPR000014 PAS domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 Gene3D G3DSA:3.20.20.450 892 1141 1.0E-104 T 23-04-2016 IPR001633 EAL domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SMART SM00091 589 655 9.4E-7 T 23-04-2016 IPR000014 PAS domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SMART SM00091 453 519 5.6 T 23-04-2016 IPR000014 PAS domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 PANTHER PTHR10799 29 45 4.4E-83 T 23-04-2016 LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 PANTHER PTHR10799 542 720 4.4E-83 T 23-04-2016 LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 Gene3D G3DSA:3.30.450.20 285 311 3.4E-13 T 23-04-2016 LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 Gene3D G3DSA:3.30.450.20 444 578 5.1E-16 T 23-04-2016 LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 Gene3D G3DSA:3.30.450.20 346 439 3.4E-13 T 23-04-2016 LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 PANTHER PTHR10799:SF774 29 45 4.4E-83 T 23-04-2016 LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 PANTHER PTHR10799:SF774 542 720 4.4E-83 T 23-04-2016 LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 PANTHER PTHR10799 747 989 4.4E-83 T 23-04-2016 LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 Pfam PF13426 PAS domain 465 580 2.9E-6 T 23-04-2016 IPR000014 PAS domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 Pfam PF13426 PAS domain 601 702 1.8E-15 T 23-04-2016 IPR000014 PAS domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SMART SM00267 703 879 9.0E-65 T 23-04-2016 IPR000160 GGDEF domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 593 709 1.8E-18 T 23-04-2016 IPR000014 PAS domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 449 588 1.0E-8 T 23-04-2016 IPR000014 PAS domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 Pfam PF00563 EAL domain 895 1130 3.1E-75 T 23-04-2016 IPR001633 EAL domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SUPERFAMILY SSF55785 282 314 6.63E-8 T 23-04-2016 IPR000014 PAS domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SUPERFAMILY SSF55785 349 439 6.63E-8 T 23-04-2016 IPR000014 PAS domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 Pfam PF00990 Diguanylate cyclase, GGDEF domain 714 875 9.9E-49 T 23-04-2016 IPR000160 GGDEF domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SMART SM00086 661 703 3.0E-5 T 23-04-2016 IPR001610 PAC motif LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SMART SM00086 539 581 9.5E-5 T 23-04-2016 IPR001610 PAC motif LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SUPERFAMILY SSF55785 438 579 1.01E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SMART SM00052 889 1135 2.1E-125 T 23-04-2016 IPR001633 EAL domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 Gene3D G3DSA:3.30.70.270 715 886 8.6E-58 T 23-04-2016 LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 SUPERFAMILY SSF141868 894 1141 8.76E-93 T 23-04-2016 IPR001633 EAL domain LT40_RS19350 3d88cfdda30899d98af72fc064c9339f 1149 Gene3D G3DSA:3.30.450.20 579 697 3.8E-21 T 23-04-2016 LT40_RS16930 fc0a95c66a8f8b701a8564e634939020 443 Gene3D G3DSA:3.90.230.10 181 437 7.4E-90 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS16930 fc0a95c66a8f8b701a8564e634939020 443 SMART SM01011 4 138 1.5E-67 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 LT40_RS16930 fc0a95c66a8f8b701a8564e634939020 443 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 128 3.0E-36 T 23-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 LT40_RS16930 fc0a95c66a8f8b701a8564e634939020 443 PANTHER PTHR10804:SF17 4 437 4.0E-168 T 23-04-2016 LT40_RS16930 fc0a95c66a8f8b701a8564e634939020 443 SUPERFAMILY SSF55920 177 437 3.66E-87 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS16930 fc0a95c66a8f8b701a8564e634939020 443 SUPERFAMILY SSF53092 3 176 3.92E-55 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal LT40_RS16930 fc0a95c66a8f8b701a8564e634939020 443 Gene3D G3DSA:3.40.350.10 4 180 5.2E-55 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LT40_RS16930 fc0a95c66a8f8b701a8564e634939020 443 PANTHER PTHR10804 4 437 4.0E-168 T 23-04-2016 LT40_RS16930 fc0a95c66a8f8b701a8564e634939020 443 Pfam PF00557 Metallopeptidase family M24 184 415 3.0E-67 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS05085 a3f880dbd6680c9af0f1842c696a24f5 444 PANTHER PTHR30011:SF23 1 444 1.1E-199 T 23-04-2016 LT40_RS05085 a3f880dbd6680c9af0f1842c696a24f5 444 Pfam PF00296 Luciferase-like monooxygenase 20 378 8.5E-62 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS05085 a3f880dbd6680c9af0f1842c696a24f5 444 Gene3D G3DSA:3.20.20.30 345 431 3.6E-132 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS05085 a3f880dbd6680c9af0f1842c696a24f5 444 Gene3D G3DSA:3.20.20.30 2 304 3.6E-132 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS05085 a3f880dbd6680c9af0f1842c696a24f5 444 PIRSF PIRSF000337 1 439 3.0E-146 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LT40_RS05085 a3f880dbd6680c9af0f1842c696a24f5 444 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 424 7.1E-161 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LT40_RS05085 a3f880dbd6680c9af0f1842c696a24f5 444 PANTHER PTHR30011 1 444 1.1E-199 T 23-04-2016 LT40_RS05085 a3f880dbd6680c9af0f1842c696a24f5 444 SUPERFAMILY SSF51679 3 430 1.57E-129 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS18375 36fd185a11fbfd2df73815610af1a3a9 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 91 4.7E-43 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 LT40_RS18375 36fd185a11fbfd2df73815610af1a3a9 91 Gene3D G3DSA:3.30.860.10 2 90 3.2E-39 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 LT40_RS18375 36fd185a11fbfd2df73815610af1a3a9 91 PIRSF PIRSF002144 1 91 3.6E-31 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LT40_RS18375 36fd185a11fbfd2df73815610af1a3a9 91 SUPERFAMILY SSF54570 3 83 3.01E-34 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 LT40_RS18375 36fd185a11fbfd2df73815610af1a3a9 91 PANTHER PTHR11880 2 91 5.7E-51 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LT40_RS18375 36fd185a11fbfd2df73815610af1a3a9 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.531 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LT40_RS18375 36fd185a11fbfd2df73815610af1a3a9 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 LT40_RS18375 36fd185a11fbfd2df73815610af1a3a9 91 Pfam PF00203 Ribosomal protein S19 3 83 1.0E-35 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LT40_RS18375 36fd185a11fbfd2df73815610af1a3a9 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.9E-22 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LT40_RS18375 36fd185a11fbfd2df73815610af1a3a9 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.9E-22 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LT40_RS18375 36fd185a11fbfd2df73815610af1a3a9 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.9E-22 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 LT40_RS02730 bd3379f3877ea099fb13cba5ea8d226b 703 PANTHER PTHR32552:SF29 21 37 1.0E-255 T 23-04-2016 LT40_RS02730 bd3379f3877ea099fb13cba5ea8d226b 703 PANTHER PTHR32552:SF29 60 703 1.0E-255 T 23-04-2016 LT40_RS02730 bd3379f3877ea099fb13cba5ea8d226b 703 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 167 1.9E-18 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS02730 bd3379f3877ea099fb13cba5ea8d226b 703 Gene3D G3DSA:2.40.170.20 185 701 1.5E-156 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS02730 bd3379f3877ea099fb13cba5ea8d226b 703 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 702 2.4E-109 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS02730 bd3379f3877ea099fb13cba5ea8d226b 703 SUPERFAMILY SSF56935 27 701 2.87E-136 T 23-04-2016 LT40_RS02730 bd3379f3877ea099fb13cba5ea8d226b 703 PANTHER PTHR32552 21 37 1.0E-255 T 23-04-2016 LT40_RS02730 bd3379f3877ea099fb13cba5ea8d226b 703 PANTHER PTHR32552 60 703 1.0E-255 T 23-04-2016 LT40_RS02730 bd3379f3877ea099fb13cba5ea8d226b 703 Gene3D G3DSA:2.170.130.10 49 174 5.5E-35 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS02730 bd3379f3877ea099fb13cba5ea8d226b 703 Pfam PF00593 TonB dependent receptor 471 701 1.4E-30 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS16285 ef5ef8714a41497a657fec276dda70a8 225 SUPERFAMILY SSF55729 15 189 1.65E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS16285 ef5ef8714a41497a657fec276dda70a8 225 Gene3D G3DSA:3.40.630.30 7 205 4.5E-54 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS16285 ef5ef8714a41497a657fec276dda70a8 225 Pfam PF13302 Acetyltransferase (GNAT) domain 46 164 2.7E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS16285 ef5ef8714a41497a657fec276dda70a8 225 PANTHER PTHR13256 7 212 4.1E-69 T 23-04-2016 LT40_RS16285 ef5ef8714a41497a657fec276dda70a8 225 PANTHER PTHR13256:SF22 7 212 4.1E-69 T 23-04-2016 LT40_RS09935 3c207d110f9c3c13e075eaed2975252a 298 Gene3D G3DSA:1.10.10.10 2 86 1.0E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09935 3c207d110f9c3c13e075eaed2975252a 298 SUPERFAMILY SSF53850 90 294 7.6E-44 T 23-04-2016 LT40_RS09935 3c207d110f9c3c13e075eaed2975252a 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.6E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS09935 3c207d110f9c3c13e075eaed2975252a 298 Gene3D G3DSA:3.40.190.10 90 175 2.2E-19 T 23-04-2016 LT40_RS09935 3c207d110f9c3c13e075eaed2975252a 298 PANTHER PTHR30427:SF1 1 297 6.5E-84 T 23-04-2016 LT40_RS09935 3c207d110f9c3c13e075eaed2975252a 298 SUPERFAMILY SSF46785 2 86 2.32E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09935 3c207d110f9c3c13e075eaed2975252a 298 PANTHER PTHR30427 1 297 6.5E-84 T 23-04-2016 LT40_RS09935 3c207d110f9c3c13e075eaed2975252a 298 Gene3D G3DSA:3.40.190.10 176 262 1.0E-25 T 23-04-2016 LT40_RS09935 3c207d110f9c3c13e075eaed2975252a 298 Pfam PF03466 LysR substrate binding domain 89 291 1.3E-44 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS03600 7c8bd7ef4c4811c70a36f41b881603a0 322 SMART SM00382 31 230 7.5E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS03600 7c8bd7ef4c4811c70a36f41b881603a0 322 PANTHER PTHR24220:SF576 5 321 1.0E-191 T 23-04-2016 LT40_RS03600 7c8bd7ef4c4811c70a36f41b881603a0 322 Gene3D G3DSA:3.40.50.300 3 259 7.5E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03600 7c8bd7ef4c4811c70a36f41b881603a0 322 SUPERFAMILY SSF52540 3 251 8.3E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03600 7c8bd7ef4c4811c70a36f41b881603a0 322 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 9.3E-15 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS03600 7c8bd7ef4c4811c70a36f41b881603a0 322 Pfam PF00005 ABC transporter 23 180 1.7E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS03600 7c8bd7ef4c4811c70a36f41b881603a0 322 PANTHER PTHR24220 5 321 1.0E-191 T 23-04-2016 LT40_RS03600 7c8bd7ef4c4811c70a36f41b881603a0 322 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 314 8.9E-21 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS03600 7c8bd7ef4c4811c70a36f41b881603a0 322 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS19645 b599eae9d96a3b2426ee93c1b39d05dd 255 PANTHER PTHR30373:SF2 22 216 1.7E-50 T 23-04-2016 LT40_RS19645 b599eae9d96a3b2426ee93c1b39d05dd 255 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 30 151 5.2E-40 T 23-04-2016 IPR007621 TPM domain LT40_RS19645 b599eae9d96a3b2426ee93c1b39d05dd 255 PANTHER PTHR30373 22 216 1.7E-50 T 23-04-2016 LT40_RS15420 3a5a2c26355d17cb017521ca8d67ba5d 124 SUPERFAMILY SSF52038 31 94 3.14E-13 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) LT40_RS15420 3a5a2c26355d17cb017521ca8d67ba5d 124 Gene3D G3DSA:3.30.370.10 33 98 1.1E-11 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) LT40_RS15420 3a5a2c26355d17cb017521ca8d67ba5d 124 Pfam PF01337 Barstar (barnase inhibitor) 31 98 3.4E-11 T 23-04-2016 IPR000468 Barstar (barnase inhibitor) LT40_RS05705 e6f00b1dcbed539d221c4e47e1aefb15 123 SUPERFAMILY SSF47413 65 118 2.31E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS05705 e6f00b1dcbed539d221c4e47e1aefb15 123 Gene3D G3DSA:3.40.1620.10 4 26 9.8E-5 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM LT40_RS05705 e6f00b1dcbed539d221c4e47e1aefb15 123 SMART SM00530 66 121 3.5E-10 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS05705 e6f00b1dcbed539d221c4e47e1aefb15 123 Gene3D G3DSA:1.10.260.40 66 117 1.3E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS05705 e6f00b1dcbed539d221c4e47e1aefb15 123 Pfam PF01381 Helix-turn-helix 67 105 2.9E-12 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS16980 c849c5cb77188370b9fc53bbce5666fe 326 PANTHER PTHR30024:SF17 14 326 5.5E-81 T 23-04-2016 LT40_RS16980 c849c5cb77188370b9fc53bbce5666fe 326 Gene3D G3DSA:3.40.190.10 109 229 1.6E-20 T 23-04-2016 LT40_RS16980 c849c5cb77188370b9fc53bbce5666fe 326 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 29 326 4.7E-127 T 23-04-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 LT40_RS16980 c849c5cb77188370b9fc53bbce5666fe 326 PANTHER PTHR30024 14 326 5.5E-81 T 23-04-2016 LT40_RS16980 c849c5cb77188370b9fc53bbce5666fe 326 SUPERFAMILY SSF53850 27 246 4.88E-44 T 23-04-2016 LT40_RS16980 c849c5cb77188370b9fc53bbce5666fe 326 SMART SM00062 27 243 1.5E-6 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS16980 c849c5cb77188370b9fc53bbce5666fe 326 Pfam PF09084 NMT1/THI5 like 64 243 5.0E-19 T 23-04-2016 IPR015168 SsuA/THI5-like LT40_RS12520 4c1c1605ad4213887af6ce06c3b3a12d 305 SUPERFAMILY SSF46689 251 296 5.82E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS12520 4c1c1605ad4213887af6ce06c3b3a12d 305 PANTHER PTHR11019 36 305 1.1E-75 T 23-04-2016 LT40_RS12520 4c1c1605ad4213887af6ce06c3b3a12d 305 Pfam PF12833 Helix-turn-helix domain 221 295 1.9E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS12520 4c1c1605ad4213887af6ce06c3b3a12d 305 SMART SM00342 215 298 8.0E-23 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS12520 4c1c1605ad4213887af6ce06c3b3a12d 305 SUPERFAMILY SSF46689 199 248 2.24E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS12520 4c1c1605ad4213887af6ce06c3b3a12d 305 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS12520 4c1c1605ad4213887af6ce06c3b3a12d 305 PANTHER PTHR11019:SF81 36 305 1.1E-75 T 23-04-2016 LT40_RS12520 4c1c1605ad4213887af6ce06c3b3a12d 305 Gene3D G3DSA:1.10.10.60 200 252 4.3E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS12520 4c1c1605ad4213887af6ce06c3b3a12d 305 Pfam PF06719 AraC-type transcriptional regulator N-terminus 36 185 1.1E-44 T 23-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal LT40_RS12520 4c1c1605ad4213887af6ce06c3b3a12d 305 Gene3D G3DSA:1.10.10.60 253 295 8.0E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS17865 cd26cea4285b684a77649562202d57e2 360 Pfam PF02563 Polysaccharide biosynthesis/export protein 71 154 1.5E-23 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 LT40_RS17865 cd26cea4285b684a77649562202d57e2 360 Gene3D G3DSA:3.30.1950.10 79 149 7.6E-24 T 23-04-2016 LT40_RS17865 cd26cea4285b684a77649562202d57e2 360 Gene3D G3DSA:1.20.5.70 335 349 2.4E-5 T 23-04-2016 LT40_RS17865 cd26cea4285b684a77649562202d57e2 360 PANTHER PTHR33619 1 352 3.7E-38 T 23-04-2016 LT40_RS17865 cd26cea4285b684a77649562202d57e2 360 PANTHER PTHR33619:SF3 1 352 3.7E-38 T 23-04-2016 LT40_RS17865 cd26cea4285b684a77649562202d57e2 360 Gene3D G3DSA:3.10.560.10 150 214 2.0E-12 T 23-04-2016 LT40_RS17865 cd26cea4285b684a77649562202d57e2 360 Gene3D G3DSA:3.10.560.10 226 331 1.2E-27 T 23-04-2016 LT40_RS14590 d13a2c60efac04155e1431cac2038459 211 SUPERFAMILY SSF54001 72 200 2.94E-42 T 23-04-2016 LT40_RS14590 d13a2c60efac04155e1431cac2038459 211 PANTHER PTHR21666 71 211 2.0E-38 T 23-04-2016 LT40_RS14590 d13a2c60efac04155e1431cac2038459 211 Gene3D G3DSA:3.90.1720.10 71 202 4.4E-47 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS14590 d13a2c60efac04155e1431cac2038459 211 Pfam PF00877 NlpC/P60 family 90 197 1.7E-30 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS18770 3a34e50addfc4f5872b8f80706914f9f 196 SMART SM00464 2 189 6.3E-8 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 LT40_RS18770 3a34e50addfc4f5872b8f80706914f9f 196 PANTHER PTHR23327 1 155 2.8E-45 T 23-04-2016 LT40_RS18770 3a34e50addfc4f5872b8f80706914f9f 196 PANTHER PTHR23327:SF0 1 155 2.8E-45 T 23-04-2016 LT40_RS18770 3a34e50addfc4f5872b8f80706914f9f 196 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 2 189 1.2E-19 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 LT40_RS18770 3a34e50addfc4f5872b8f80706914f9f 196 SUPERFAMILY SSF88697 1 188 1.17E-44 T 23-04-2016 IPR015947 PUA-like domain LT40_RS04100 6a07c7b1baafbfdb42e416372ec56fa9 405 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 15 405 6.7E-118 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LT40_RS04100 6a07c7b1baafbfdb42e416372ec56fa9 405 PANTHER PTHR23100:SF0 16 405 4.6E-173 T 23-04-2016 LT40_RS04100 6a07c7b1baafbfdb42e416372ec56fa9 405 Pfam PF01960 ArgJ family 22 405 1.4E-138 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LT40_RS04100 6a07c7b1baafbfdb42e416372ec56fa9 405 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 22 405 0.0 T 23-04-2016 LT40_RS04100 6a07c7b1baafbfdb42e416372ec56fa9 405 PANTHER PTHR23100 16 405 4.6E-173 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LT40_RS04100 6a07c7b1baafbfdb42e416372ec56fa9 405 Gene3D G3DSA:3.60.70.12 11 276 8.1E-94 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LT40_RS04100 6a07c7b1baafbfdb42e416372ec56fa9 405 SUPERFAMILY SSF56266 14 402 1.44E-133 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LT40_RS04100 6a07c7b1baafbfdb42e416372ec56fa9 405 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 405 155.782 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 LT40_RS04925 f1e92f7f009e4038143c1c61c0e5d449 123 Pfam PF13467 Ribbon-helix-helix domain 35 102 6.8E-19 T 23-04-2016 IPR027373 Ribbon-helix-helix domain LT40_RS09565 330ce6fa9899089772dc80825b9893cd 452 Pfam PF13520 Amino acid permease 10 418 8.9E-39 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS09565 330ce6fa9899089772dc80825b9893cd 452 TIGRFAM TIGR00908 2A0305: ethanolamine permease 5 442 3.0E-185 T 23-04-2016 IPR004757 Ethanolamine permease LT40_RS09565 330ce6fa9899089772dc80825b9893cd 452 PIRSF PIRSF006060 1 447 9.7E-65 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS09565 330ce6fa9899089772dc80825b9893cd 452 PANTHER PTHR11785 4 418 1.7E-143 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS09565 330ce6fa9899089772dc80825b9893cd 452 PANTHER PTHR11785:SF337 4 418 1.7E-143 T 23-04-2016 LT40_RS15025 186bcce42b395f4a533b03677325e044 460 Pfam PF14464 Prokaryotic homologs of the JAB domain 13 131 3.4E-9 T 23-04-2016 IPR028090 JAB domain, prokaryotic LT40_RS15025 186bcce42b395f4a533b03677325e044 460 Pfam PF00899 ThiF family 177 406 1.2E-19 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LT40_RS15025 186bcce42b395f4a533b03677325e044 460 Gene3D G3DSA:3.40.50.720 180 310 1.9E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15025 186bcce42b395f4a533b03677325e044 460 SUPERFAMILY SSF69572 179 311 4.84E-25 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LT40_RS15025 186bcce42b395f4a533b03677325e044 460 SUPERFAMILY SSF69572 366 400 4.84E-25 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 SUPERFAMILY SSF46689 199 248 5.82E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 Gene3D G3DSA:1.10.10.60 145 199 3.5E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 SUPERFAMILY SSF55785 19 134 9.6E-11 T 23-04-2016 IPR000014 PAS domain LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 Pfam PF12833 Helix-turn-helix domain 169 246 7.0E-24 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 PANTHER PTHR11019 146 249 3.3E-32 T 23-04-2016 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 SMART SM00342 162 245 1.9E-27 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 229 245 4.3E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 214 229 4.3E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 Gene3D G3DSA:3.30.450.20 19 134 1.0E-11 T 23-04-2016 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 PANTHER PTHR11019:SF113 146 249 3.3E-32 T 23-04-2016 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 Gene3D G3DSA:1.10.10.60 200 248 2.0E-19 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 SUPERFAMILY SSF46689 146 195 9.86E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS08185 41d108a8f583d45ea0306aa0fa33d63a 249 Pfam PF08448 PAS fold 27 136 3.9E-17 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS15155 6019767b5ff40b20041c6be40e673fb7 340 SUPERFAMILY SSF53850 44 278 1.17E-31 T 23-04-2016 LT40_RS15155 6019767b5ff40b20041c6be40e673fb7 340 PANTHER PTHR30024 1 333 3.5E-167 T 23-04-2016 LT40_RS15155 6019767b5ff40b20041c6be40e673fb7 340 PANTHER PTHR30024:SF2 1 333 3.5E-167 T 23-04-2016 LT40_RS15155 6019767b5ff40b20041c6be40e673fb7 340 Pfam PF13379 NMT1-like family 32 273 3.7E-26 T 23-04-2016 LT40_RS15155 6019767b5ff40b20041c6be40e673fb7 340 Gene3D G3DSA:3.40.190.10 58 151 3.6E-4 T 23-04-2016 LT40_RS06760 d308716aa2bf5164c6e55199861bf361 798 SUPERFAMILY SSF56935 139 797 2.06E-126 T 23-04-2016 LT40_RS06760 d308716aa2bf5164c6e55199861bf361 798 SMART SM00965 48 98 2.6E-10 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 LT40_RS06760 d308716aa2bf5164c6e55199861bf361 798 Gene3D G3DSA:2.170.130.10 126 256 1.3E-37 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS06760 d308716aa2bf5164c6e55199861bf361 798 Pfam PF00593 TonB dependent receptor 551 796 1.7E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS06760 d308716aa2bf5164c6e55199861bf361 798 PANTHER PTHR32552:SF37 139 798 4.5E-207 T 23-04-2016 LT40_RS06760 d308716aa2bf5164c6e55199861bf361 798 PANTHER PTHR32552:SF37 7 75 4.5E-207 T 23-04-2016 LT40_RS06760 d308716aa2bf5164c6e55199861bf361 798 Pfam PF07715 TonB-dependent Receptor Plug Domain 147 248 1.0E-16 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS06760 d308716aa2bf5164c6e55199861bf361 798 Gene3D G3DSA:2.40.170.20 264 796 7.7E-135 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS06760 d308716aa2bf5164c6e55199861bf361 798 PANTHER PTHR32552 139 798 4.5E-207 T 23-04-2016 LT40_RS06760 d308716aa2bf5164c6e55199861bf361 798 PANTHER PTHR32552 7 75 4.5E-207 T 23-04-2016 LT40_RS06760 d308716aa2bf5164c6e55199861bf361 798 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 149 794 2.3E-101 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS04140 bac6cc466fc66d47a2d3cc56cc4e4115 122 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 23 101 1.4E-19 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LT40_RS04140 bac6cc466fc66d47a2d3cc56cc4e4115 122 PANTHER PTHR10815 21 119 3.6E-30 T 23-04-2016 LT40_RS04140 bac6cc466fc66d47a2d3cc56cc4e4115 122 Gene3D G3DSA:1.10.10.10 22 103 9.1E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04140 bac6cc466fc66d47a2d3cc56cc4e4115 122 PANTHER PTHR10815:SF2 21 119 3.6E-30 T 23-04-2016 LT40_RS04140 bac6cc466fc66d47a2d3cc56cc4e4115 122 SUPERFAMILY SSF46767 23 102 2.88E-19 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 LT40_RS10175 93c3e49d5bd6084dc9a35bdacb0867e4 342 Pfam PF01497 Periplasmic binding protein 50 316 2.7E-42 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LT40_RS10175 93c3e49d5bd6084dc9a35bdacb0867e4 342 PANTHER PTHR30535 19 145 1.1E-35 T 23-04-2016 LT40_RS10175 93c3e49d5bd6084dc9a35bdacb0867e4 342 PANTHER PTHR30535 162 335 1.1E-35 T 23-04-2016 LT40_RS10175 93c3e49d5bd6084dc9a35bdacb0867e4 342 Gene3D G3DSA:3.40.50.1980 204 335 8.5E-23 T 23-04-2016 LT40_RS10175 93c3e49d5bd6084dc9a35bdacb0867e4 342 SUPERFAMILY SSF53807 46 335 4.32E-41 T 23-04-2016 LT40_RS10175 93c3e49d5bd6084dc9a35bdacb0867e4 342 Gene3D G3DSA:3.40.50.1980 46 193 2.2E-16 T 23-04-2016 LT40_RS10175 93c3e49d5bd6084dc9a35bdacb0867e4 342 PANTHER PTHR30535:SF7 19 145 1.1E-35 T 23-04-2016 LT40_RS10175 93c3e49d5bd6084dc9a35bdacb0867e4 342 PANTHER PTHR30535:SF7 162 335 1.1E-35 T 23-04-2016 LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 SUPERFAMILY SSF52540 3 428 4.04E-175 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 SMART SM00788 4 423 4.0E-292 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 Gene3D G3DSA:3.90.170.10 267 424 5.5E-66 T 23-04-2016 LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 428 4.1E-181 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 Pfam PF00709 Adenylosuccinate synthetase 5 422 2.1E-175 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 Gene3D G3DSA:3.40.440.10 3 94 8.2E-71 T 23-04-2016 LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 Gene3D G3DSA:3.40.440.10 196 266 8.2E-71 T 23-04-2016 LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 Gene3D G3DSA:1.10.300.10 103 195 3.2E-37 T 23-04-2016 LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 214.308 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LT40_RS13785 fb764bb25beb75debd2f95a439c39389 429 PANTHER PTHR11846 1 427 2.2E-246 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 LT40_RS17870 25fadd6ad600fc88522b566fb459f201 399 Gene3D G3DSA:3.40.50.2000 199 333 2.0E-14 T 23-04-2016 LT40_RS17870 25fadd6ad600fc88522b566fb459f201 399 Pfam PF00534 Glycosyl transferases group 1 197 349 2.7E-19 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS17870 25fadd6ad600fc88522b566fb459f201 399 Pfam PF13439 Glycosyltransferase Family 4 39 190 5.3E-9 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LT40_RS17870 25fadd6ad600fc88522b566fb459f201 399 PANTHER PTHR12526 1 357 8.4E-37 T 23-04-2016 LT40_RS17870 25fadd6ad600fc88522b566fb459f201 399 SUPERFAMILY SSF53756 1 361 1.33E-54 T 23-04-2016 LT40_RS18815 9642af82a0b01c68d65f793d7073bf64 336 SUPERFAMILY SSF53955 28 329 1.87E-97 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS18815 9642af82a0b01c68d65f793d7073bf64 336 PANTHER PTHR30163 1 334 1.9E-167 T 23-04-2016 IPR011757 Lytic transglycosylase MltB LT40_RS18815 9642af82a0b01c68d65f793d7073bf64 336 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 40 329 3.1E-121 T 23-04-2016 IPR011757 Lytic transglycosylase MltB LT40_RS18815 9642af82a0b01c68d65f793d7073bf64 336 Pfam PF13406 Transglycosylase SLT domain 36 327 3.3E-104 T 23-04-2016 IPR031304 Transglycosylase SLT domain 2 LT40_RS18815 9642af82a0b01c68d65f793d7073bf64 336 PANTHER PTHR30163:SF0 1 334 1.9E-167 T 23-04-2016 LT40_RS18815 9642af82a0b01c68d65f793d7073bf64 336 Gene3D G3DSA:1.10.530.10 79 135 5.6E-58 T 23-04-2016 LT40_RS18815 9642af82a0b01c68d65f793d7073bf64 336 Gene3D G3DSA:1.10.530.10 217 332 5.6E-58 T 23-04-2016 LT40_RS15330 4c1c6749676b0c4069eb4244df6422b4 260 Gene3D G3DSA:3.40.190.10 23 151 4.4E-52 T 23-04-2016 LT40_RS15330 4c1c6749676b0c4069eb4244df6422b4 260 PANTHER PTHR30429 1 260 4.5E-143 T 23-04-2016 IPR004872 Lipoprotein NlpA family LT40_RS15330 4c1c6749676b0c4069eb4244df6422b4 260 Pfam PF03180 NLPA lipoprotein 25 260 6.9E-101 T 23-04-2016 IPR004872 Lipoprotein NlpA family LT40_RS15330 4c1c6749676b0c4069eb4244df6422b4 260 PIRSF PIRSF002854 1 260 1.3E-102 T 23-04-2016 IPR004872 Lipoprotein NlpA family LT40_RS15330 4c1c6749676b0c4069eb4244df6422b4 260 SUPERFAMILY SSF53850 24 260 8.31E-85 T 23-04-2016 LT40_RS15330 4c1c6749676b0c4069eb4244df6422b4 260 PANTHER PTHR30429:SF0 1 260 4.5E-143 T 23-04-2016 LT40_RS12525 683f48952a6372a1ebb35e475409d5b7 402 SUPERFAMILY SSF103473 10 388 1.44E-56 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS12525 683f48952a6372a1ebb35e475409d5b7 402 Pfam PF07690 Major Facilitator Superfamily 22 332 5.5E-32 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS12525 683f48952a6372a1ebb35e475409d5b7 402 PANTHER PTHR23501 13 388 2.5E-165 T 23-04-2016 LT40_RS12525 683f48952a6372a1ebb35e475409d5b7 402 PANTHER PTHR23501:SF28 13 388 2.5E-165 T 23-04-2016 LT40_RS12525 683f48952a6372a1ebb35e475409d5b7 402 Gene3D G3DSA:1.20.1250.20 18 196 7.7E-30 T 23-04-2016 LT40_RS12525 683f48952a6372a1ebb35e475409d5b7 402 Gene3D G3DSA:1.20.1250.20 214 386 1.6E-12 T 23-04-2016 LT40_RS10810 259687d9c57e5bcbdffa65897a155835 216 Gene3D G3DSA:2.60.120.590 39 215 1.3E-51 T 23-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like LT40_RS10810 259687d9c57e5bcbdffa65897a155835 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 39 213 2.0E-51 T 23-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like LT40_RS10810 259687d9c57e5bcbdffa65897a155835 216 SUPERFAMILY SSF51197 21 214 3.16E-55 T 23-04-2016 LT40_RS10810 259687d9c57e5bcbdffa65897a155835 216 PANTHER PTHR16557 48 213 1.4E-41 T 23-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 LT40_RS08215 5e3ac88438b645104339597d2038ffb0 526 PANTHER PTHR34219:SF4 1 522 3.1E-170 T 23-04-2016 LT40_RS08215 5e3ac88438b645104339597d2038ffb0 526 Pfam PF03929 PepSY-associated TM region 10 374 1.0E-50 T 23-04-2016 IPR005625 PepSY-associated TM protein LT40_RS08215 5e3ac88438b645104339597d2038ffb0 526 PANTHER PTHR34219 1 522 3.1E-170 T 23-04-2016 LT40_RS16740 385cfb2098351779643c6ad79b2ed441 108 Pfam PF01491 Frataxin-like domain 3 101 6.7E-26 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 LT40_RS16740 385cfb2098351779643c6ad79b2ed441 108 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 23-04-2016 IPR020895 Frataxin conserved site LT40_RS16740 385cfb2098351779643c6ad79b2ed441 108 Gene3D G3DSA:3.30.920.10 2 106 1.3E-28 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 LT40_RS16740 385cfb2098351779643c6ad79b2ed441 108 PANTHER PTHR16821 2 105 5.6E-32 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 LT40_RS16740 385cfb2098351779643c6ad79b2ed441 108 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 4 105 3.6E-32 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 LT40_RS16740 385cfb2098351779643c6ad79b2ed441 108 SMART SM01219 3 106 5.9E-42 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 LT40_RS16740 385cfb2098351779643c6ad79b2ed441 108 SUPERFAMILY SSF55387 3 105 5.58E-30 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 LT40_RS16740 385cfb2098351779643c6ad79b2ed441 108 Hamap MF_00142 Protein CyaY [cyaY]. 3 105 22.089 T 23-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 LT40_RS07900 ce713323bfa524a15b41ff9959a23623 275 SUPERFAMILY SSF103481 199 274 4.97E-11 T 23-04-2016 LT40_RS07900 ce713323bfa524a15b41ff9959a23623 275 PANTHER PTHR22911 6 274 5.6E-59 T 23-04-2016 LT40_RS07900 ce713323bfa524a15b41ff9959a23623 275 SUPERFAMILY SSF103481 38 135 1.57E-11 T 23-04-2016 LT40_RS07900 ce713323bfa524a15b41ff9959a23623 275 PANTHER PTHR22911:SF61 6 274 5.6E-59 T 23-04-2016 LT40_RS07900 ce713323bfa524a15b41ff9959a23623 275 Pfam PF00892 EamA-like transporter family 144 274 5.1E-12 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 Gene3D G3DSA:3.30.420.40 252 494 4.3E-103 T 23-04-2016 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 Gene3D G3DSA:3.30.420.40 6 251 6.0E-106 T 23-04-2016 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 360 380 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 449 4.3E-64 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 Hamap MF_00186 Glycerol kinase [glpK]. 7 495 58.683 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 SUPERFAMILY SSF53067 252 495 2.04E-86 T 23-04-2016 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 8 494 1.4E-224 T 23-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 PANTHER PTHR10196:SF9 1 500 1.2E-261 T 23-04-2016 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 PIRSF PIRSF000538 7 500 6.3E-179 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 250 8.8E-87 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 139 151 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 PANTHER PTHR10196 1 500 1.2E-261 T 23-04-2016 LT40_RS05545 befd62183d8c5c6ceeeca9db7f0bdbfe 500 SUPERFAMILY SSF53067 9 253 4.44E-96 T 23-04-2016 LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 Gene3D G3DSA:1.10.287.130 208 253 1.9E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 412 1.2E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 PANTHER PTHR24423 179 412 1.9E-32 T 23-04-2016 LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 SUPERFAMILY SSF47384 203 263 3.92E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 4.7E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 392 4.7E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 359 4.7E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 373 4.7E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 SUPERFAMILY SSF55874 258 412 3.67E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 SMART SM00388 203 268 1.8E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 SMART SM00387 310 414 9.8E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS03645 ae14b6144b9ccd6d7f29c206a4892152 419 Gene3D G3DSA:3.30.565.10 254 412 3.6E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 SUPERFAMILY SSF54909 70 149 4.69E-16 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 6.6E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 6.6E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 6.6E-11 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 SUPERFAMILY SSF46785 7 66 4.97E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 Gene3D G3DSA:1.10.10.10 6 59 5.6E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 Pfam PF01037 Lrp/AsnC ligand binding domain 75 144 3.7E-15 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 PANTHER PTHR30154:SF12 2 150 7.7E-38 T 23-04-2016 LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 Pfam PF13404 AsnC-type helix-turn-helix domain 9 50 6.1E-12 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 SMART SM00344 9 115 7.3E-22 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 PANTHER PTHR30154 2 150 7.7E-38 T 23-04-2016 LT40_RS17955 d21f7ef584ccd3439dc5348593ea60c2 151 Gene3D G3DSA:3.30.70.920 73 144 1.9E-19 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 Gene3D G3DSA:3.40.50.1980 33 246 7.4E-81 T 23-04-2016 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 PRINTS PR00083 Histidinol dehydrogenase signature 258 277 1.0E-88 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 PRINTS PR00083 Histidinol dehydrogenase signature 39 63 1.0E-88 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 PRINTS PR00083 Histidinol dehydrogenase signature 177 203 1.0E-88 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 PRINTS PR00083 Histidinol dehydrogenase signature 368 386 1.0E-88 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 PRINTS PR00083 Histidinol dehydrogenase signature 207 232 1.0E-88 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 PRINTS PR00083 Histidinol dehydrogenase signature 236 257 1.0E-88 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 PRINTS PR00083 Histidinol dehydrogenase signature 143 169 1.0E-88 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 PRINTS PR00083 Histidinol dehydrogenase signature 327 352 1.0E-88 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 236 268 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 Pfam PF00815 Histidinol dehydrogenase 29 433 1.7E-170 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 SUPERFAMILY SSF53720 33 434 4.71E-88 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 PANTHER PTHR21256 6 440 1.3E-207 T 23-04-2016 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 PIRSF PIRSF000099 6 436 1.2E-163 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 39 433 1.3E-162 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS03860 5a8c80adca197f85f33aa5a62bcd8911 442 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 11 434 41.452 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 LT40_RS06560 07be42ae08f00aaf5eb6c5886e5bbc3e 104 PANTHER PTHR30561:SF0 1 104 4.6E-49 T 23-04-2016 LT40_RS06560 07be42ae08f00aaf5eb6c5886e5bbc3e 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.0E-31 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 LT40_RS06560 07be42ae08f00aaf5eb6c5886e5bbc3e 104 SUPERFAMILY SSF103481 5 102 9.15E-19 T 23-04-2016 LT40_RS06560 07be42ae08f00aaf5eb6c5886e5bbc3e 104 PANTHER PTHR30561 1 104 4.6E-49 T 23-04-2016 LT40_RS15955 19f13e60d4d00925d44bb9d846d725e5 341 SUPERFAMILY SSF54106 29 77 1.44E-7 T 23-04-2016 IPR018392 LysM domain LT40_RS15955 19f13e60d4d00925d44bb9d846d725e5 341 PANTHER PTHR34700 4 340 5.8E-87 T 23-04-2016 LT40_RS15955 19f13e60d4d00925d44bb9d846d725e5 341 Gene3D G3DSA:3.10.350.10 29 77 1.1E-7 T 23-04-2016 IPR018392 LysM domain LT40_RS15955 19f13e60d4d00925d44bb9d846d725e5 341 Pfam PF01476 LysM domain 31 76 2.9E-12 T 23-04-2016 IPR018392 LysM domain LT40_RS15955 19f13e60d4d00925d44bb9d846d725e5 341 PANTHER PTHR34700:SF2 4 340 5.8E-87 T 23-04-2016 LT40_RS15955 19f13e60d4d00925d44bb9d846d725e5 341 SMART SM00257 30 78 1.5E-5 T 23-04-2016 IPR018392 LysM domain LT40_RS16205 07c583dc90bca97414f906442482487d 403 SMART SM00833 256 373 1.4E-45 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LT40_RS16205 07c583dc90bca97414f906442482487d 403 SUPERFAMILY SSF52540 2 309 5.13E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16205 07c583dc90bca97414f906442482487d 403 Gene3D G3DSA:3.30.1220.10 242 373 1.7E-18 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LT40_RS16205 07c583dc90bca97414f906442482487d 403 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 210 9.6E-57 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LT40_RS16205 07c583dc90bca97414f906442482487d 403 PANTHER PTHR13748 3 331 7.3E-189 T 23-04-2016 LT40_RS16205 07c583dc90bca97414f906442482487d 403 PANTHER PTHR13748 347 387 7.3E-189 T 23-04-2016 LT40_RS16205 07c583dc90bca97414f906442482487d 403 Gene3D G3DSA:3.40.50.300 3 229 1.2E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16205 07c583dc90bca97414f906442482487d 403 PANTHER PTHR13748:SF4 3 331 7.3E-189 T 23-04-2016 LT40_RS16205 07c583dc90bca97414f906442482487d 403 PANTHER PTHR13748:SF4 347 387 7.3E-189 T 23-04-2016 LT40_RS16205 07c583dc90bca97414f906442482487d 403 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 256 373 1.3E-28 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LT40_RS19615 66699ae87f70d33d395738d1a11e64ff 133 Gene3D G3DSA:3.10.180.10 1 128 4.0E-21 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS19615 66699ae87f70d33d395738d1a11e64ff 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 126 9.1E-7 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LT40_RS19615 66699ae87f70d33d395738d1a11e64ff 133 PANTHER PTHR35006 1 128 3.5E-32 T 23-04-2016 LT40_RS19615 66699ae87f70d33d395738d1a11e64ff 133 SUPERFAMILY SSF54593 2 131 6.46E-18 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 Gene3D G3DSA:3.30.450.20 158 294 6.5E-25 T 23-04-2016 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 Pfam PF02743 Cache domain 39 277 1.0E-30 T 23-04-2016 IPR033479 Double Cache domain 1 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 PANTHER PTHR32089 182 647 8.2E-128 T 23-04-2016 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 SUPERFAMILY SSF58104 338 647 1.96E-72 T 23-04-2016 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 SMART SM00283 385 646 5.7E-63 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 SUPERFAMILY SSF103190 126 203 8.24E-6 T 23-04-2016 IPR029151 Periplasmic sensor domain-like LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 449 645 5.0E-45 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 PANTHER PTHR32089:SF34 182 647 8.2E-128 T 23-04-2016 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 Pfam PF00672 HAMP domain 298 363 1.1E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 SMART SM00304 316 370 9.5E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 Gene3D G3DSA:1.10.287.950 400 614 2.6E-58 T 23-04-2016 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 291 311 2.4E-6 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 512 541 2.4E-6 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS05485 412112097fdcf13cc1e0c9c62dcb85ee 647 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 560 589 2.4E-6 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS13705 e0b1937943388229ecda3718dcc1f506 828 Pfam PF14403 Circularly permuted ATP-grasp type 2 81 459 2.9E-163 T 23-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 LT40_RS13705 e0b1937943388229ecda3718dcc1f506 828 PANTHER PTHR34595:SF1 4 828 0.0 T 23-04-2016 LT40_RS13705 e0b1937943388229ecda3718dcc1f506 828 SUPERFAMILY SSF56059 326 418 2.12E-23 T 23-04-2016 LT40_RS13705 e0b1937943388229ecda3718dcc1f506 828 SUPERFAMILY SSF56059 25 219 2.12E-23 T 23-04-2016 LT40_RS13705 e0b1937943388229ecda3718dcc1f506 828 PANTHER PTHR34595 4 828 0.0 T 23-04-2016 LT40_RS13705 e0b1937943388229ecda3718dcc1f506 828 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 509 815 1.3E-63 T 23-04-2016 IPR007296 Domain of unknown function DUF403 LT40_RS20405 bb3c9cdf6eec1ba7d06be7157a693e17 287 TIGRFAM TIGR02285 TIGR02285: conserved hypothetical protein 6 265 2.0E-63 T 23-04-2016 IPR011972 Conserved hypothetical protein CHP02285 LT40_RS20405 bb3c9cdf6eec1ba7d06be7157a693e17 287 SUPERFAMILY SSF53850 64 260 1.67E-6 T 23-04-2016 LT40_RS03290 27829e39922421e04b8da9662536ee9a 382 Pfam PF13437 HlyD family secretion protein 177 282 5.2E-7 T 23-04-2016 LT40_RS03290 27829e39922421e04b8da9662536ee9a 382 Pfam PF13533 Biotin-lipoyl like 66 113 2.1E-14 T 23-04-2016 LT40_RS03290 27829e39922421e04b8da9662536ee9a 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 370 6.7E-68 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LT40_RS03290 27829e39922421e04b8da9662536ee9a 382 PANTHER PTHR30469:SF0 1 381 6.3E-118 T 23-04-2016 LT40_RS03290 27829e39922421e04b8da9662536ee9a 382 SUPERFAMILY SSF111369 58 298 8.37E-52 T 23-04-2016 LT40_RS03290 27829e39922421e04b8da9662536ee9a 382 Gene3D G3DSA:2.40.50.100 66 99 1.2E-18 T 23-04-2016 LT40_RS03290 27829e39922421e04b8da9662536ee9a 382 Gene3D G3DSA:2.40.50.100 174 208 1.2E-18 T 23-04-2016 LT40_RS03290 27829e39922421e04b8da9662536ee9a 382 PANTHER PTHR30469 1 381 6.3E-118 T 23-04-2016 LT40_RS20240 090d2942fd0166b5703334cad91c4664 139 PANTHER PTHR33653 1 138 7.7E-27 T 23-04-2016 LT40_RS20240 090d2942fd0166b5703334cad91c4664 139 Gene3D G3DSA:3.40.50.1010 1 137 4.8E-20 T 23-04-2016 IPR029060 PIN domain-like LT40_RS20240 090d2942fd0166b5703334cad91c4664 139 SUPERFAMILY SSF88723 1 137 1.85E-27 T 23-04-2016 IPR029060 PIN domain-like LT40_RS20240 090d2942fd0166b5703334cad91c4664 139 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 135 12.043 T 23-04-2016 IPR022907 VapC family GO:0004540 LT40_RS20240 090d2942fd0166b5703334cad91c4664 139 PANTHER PTHR33653:SF1 1 138 7.7E-27 T 23-04-2016 LT40_RS20240 090d2942fd0166b5703334cad91c4664 139 Pfam PF01850 PIN domain 2 129 1.4E-16 T 23-04-2016 IPR002716 PIN domain LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 Gene3D G3DSA:3.90.226.10 414 435 1.3E-67 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 Gene3D G3DSA:3.90.226.10 191 375 1.3E-67 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 PANTHER PTHR32060 62 372 4.1E-119 T 23-04-2016 LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 381 1.3E-105 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 SMART SM00245 181 373 5.3E-71 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 Pfam PF03572 Peptidase family S41 207 372 6.8E-57 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 SUPERFAMILY SSF50156 99 183 4.32E-19 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 SMART SM00228 109 180 3.3E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 105 176 1.3E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 Gene3D G3DSA:2.30.42.10 116 190 6.0E-27 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 Gene3D G3DSA:3.30.750.44 65 115 6.9E-11 T 23-04-2016 LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 SUPERFAMILY SSF52096 48 127 7.12E-83 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS14505 5d184a8bdc99d77402274a63f10aeb9b 441 SUPERFAMILY SSF52096 200 377 7.12E-83 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS09910 c32df7066aecbecf9c19dd0c8c9e4f09 379 PANTHER PTHR13847 10 370 4.1E-48 T 23-04-2016 LT40_RS09910 c32df7066aecbecf9c19dd0c8c9e4f09 379 SUPERFAMILY SSF54373 231 314 8.11E-12 T 23-04-2016 LT40_RS09910 c32df7066aecbecf9c19dd0c8c9e4f09 379 SUPERFAMILY SSF51905 10 231 6.91E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09910 c32df7066aecbecf9c19dd0c8c9e4f09 379 SUPERFAMILY SSF51905 314 370 6.91E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09910 c32df7066aecbecf9c19dd0c8c9e4f09 379 Gene3D G3DSA:3.30.9.10 107 152 1.2E-6 T 23-04-2016 LT40_RS09910 c32df7066aecbecf9c19dd0c8c9e4f09 379 Gene3D G3DSA:3.30.9.10 231 260 1.2E-6 T 23-04-2016 LT40_RS09910 c32df7066aecbecf9c19dd0c8c9e4f09 379 Pfam PF01266 FAD dependent oxidoreductase 11 349 2.8E-49 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS09910 c32df7066aecbecf9c19dd0c8c9e4f09 379 Gene3D G3DSA:3.50.50.60 314 369 2.0E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09910 c32df7066aecbecf9c19dd0c8c9e4f09 379 Gene3D G3DSA:3.50.50.60 4 89 2.0E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09910 c32df7066aecbecf9c19dd0c8c9e4f09 379 Gene3D G3DSA:3.50.50.60 153 230 2.0E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14410 2a50bf903ddacebf36a44bd1447ed9ef 189 Gene3D G3DSA:2.40.128.20 7 180 1.3E-54 T 23-04-2016 IPR012674 Calycin LT40_RS14410 2a50bf903ddacebf36a44bd1447ed9ef 189 ProSitePatterns PS00213 Lipocalin signature. 37 48 - T 23-04-2016 IPR022272 Lipocalin family conserved site LT40_RS14410 2a50bf903ddacebf36a44bd1447ed9ef 189 PANTHER PTHR10612 6 180 8.7E-44 T 23-04-2016 LT40_RS14410 2a50bf903ddacebf36a44bd1447ed9ef 189 SUPERFAMILY SSF50814 8 182 1.4E-45 T 23-04-2016 IPR011038 Calycin-like LT40_RS14410 2a50bf903ddacebf36a44bd1447ed9ef 189 PRINTS PR01171 Bacterial lipocalin signature 53 69 7.07E-12 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 LT40_RS14410 2a50bf903ddacebf36a44bd1447ed9ef 189 PRINTS PR01171 Bacterial lipocalin signature 145 156 7.07E-12 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 LT40_RS14410 2a50bf903ddacebf36a44bd1447ed9ef 189 PRINTS PR01171 Bacterial lipocalin signature 172 182 7.07E-12 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 LT40_RS14410 2a50bf903ddacebf36a44bd1447ed9ef 189 PRINTS PR01171 Bacterial lipocalin signature 36 50 7.07E-12 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 LT40_RS14410 2a50bf903ddacebf36a44bd1447ed9ef 189 PIRSF PIRSF036893 1 187 1.3E-58 T 23-04-2016 IPR022271 Lipocalin, ApoD type LT40_RS14410 2a50bf903ddacebf36a44bd1447ed9ef 189 Pfam PF08212 Lipocalin-like domain 36 182 2.9E-60 T 23-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain LT40_RS15835 6162a14c0dbac49e192b1943ce782134 682 PANTHER PTHR11804:SF8 2 681 0.0 T 23-04-2016 LT40_RS15835 6162a14c0dbac49e192b1943ce782134 682 Gene3D G3DSA:3.40.390.10 359 504 6.0E-59 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LT40_RS15835 6162a14c0dbac49e192b1943ce782134 682 Gene3D G3DSA:1.20.1050.40 10 140 7.8E-27 T 23-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal LT40_RS15835 6162a14c0dbac49e192b1943ce782134 682 SUPERFAMILY SSF55486 4 675 9.77E-205 T 23-04-2016 LT40_RS15835 6162a14c0dbac49e192b1943ce782134 682 Gene3D G3DSA:1.10.1370.10 142 350 1.4E-141 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LT40_RS15835 6162a14c0dbac49e192b1943ce782134 682 Gene3D G3DSA:1.10.1370.10 505 676 1.4E-141 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LT40_RS15835 6162a14c0dbac49e192b1943ce782134 682 PANTHER PTHR11804 2 681 0.0 T 23-04-2016 LT40_RS15835 6162a14c0dbac49e192b1943ce782134 682 Pfam PF01432 Peptidase family M3 224 675 1.2E-151 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 LT40_RS11605 c79f1d1b34034c3bd3080852301c73b8 493 Gene3D G3DSA:3.40.605.10 5 265 4.6E-98 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS11605 c79f1d1b34034c3bd3080852301c73b8 493 PANTHER PTHR11699 5 483 2.0E-236 T 23-04-2016 LT40_RS11605 c79f1d1b34034c3bd3080852301c73b8 493 Gene3D G3DSA:3.40.309.10 266 450 5.8E-70 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS11605 c79f1d1b34034c3bd3080852301c73b8 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS11605 c79f1d1b34034c3bd3080852301c73b8 493 SUPERFAMILY SSF53720 4 483 9.42E-171 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS11605 c79f1d1b34034c3bd3080852301c73b8 493 Pfam PF00171 Aldehyde dehydrogenase family 14 477 5.0E-174 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS11605 c79f1d1b34034c3bd3080852301c73b8 493 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS01755 a1337e7eed42876f13fefa3946f82ddc 186 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 5 181 2.0E-54 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LT40_RS01755 a1337e7eed42876f13fefa3946f82ddc 186 PIRSF PIRSF001296 1 185 1.0E-62 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LT40_RS01755 a1337e7eed42876f13fefa3946f82ddc 186 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 181 31.506 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LT40_RS01755 a1337e7eed42876f13fefa3946f82ddc 186 PANTHER PTHR30042:SF2 1 181 2.2E-70 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LT40_RS01755 a1337e7eed42876f13fefa3946f82ddc 186 Pfam PF02669 K+-transporting ATPase, c chain 6 180 7.9E-60 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 LT40_RS01755 a1337e7eed42876f13fefa3946f82ddc 186 PANTHER PTHR30042 1 181 2.2E-70 T 23-04-2016 LT40_RS04615 bc2a8faadae1a2c177a949946236eca9 316 PANTHER PTHR38782 1 313 3.3E-70 T 23-04-2016 LT40_RS04615 bc2a8faadae1a2c177a949946236eca9 316 PIRSF PIRSF005427 1 314 1.3E-75 T 23-04-2016 IPR005588 MucB/RseB LT40_RS04615 bc2a8faadae1a2c177a949946236eca9 316 Pfam PF03888 MucB/RseB N-terminal domain 22 184 2.8E-44 T 23-04-2016 IPR033434 MucB/RseB, N-terminal LT40_RS04615 bc2a8faadae1a2c177a949946236eca9 316 Gene3D G3DSA:2.50.20.10 112 180 1.1E-7 T 23-04-2016 LT40_RS04615 bc2a8faadae1a2c177a949946236eca9 316 Pfam PF17188 MucB/RseB C-terminal domain 211 307 1.0E-22 T 23-04-2016 IPR033436 MucB/RseB, C-terminal LT40_RS04615 bc2a8faadae1a2c177a949946236eca9 316 PANTHER PTHR38782:SF1 1 313 3.3E-70 T 23-04-2016 LT40_RS10370 45dc32d3a09cf183c9f473c771b8b65f 359 PANTHER PTHR30349:SF5 32 87 1.5E-16 T 23-04-2016 LT40_RS10370 45dc32d3a09cf183c9f473c771b8b65f 359 PANTHER PTHR30349:SF5 113 342 1.5E-16 T 23-04-2016 LT40_RS10370 45dc32d3a09cf183c9f473c771b8b65f 359 Pfam PF00589 Phage integrase family 173 342 5.5E-16 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS10370 45dc32d3a09cf183c9f473c771b8b65f 359 Gene3D G3DSA:1.10.150.130 31 159 3.7E-15 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal LT40_RS10370 45dc32d3a09cf183c9f473c771b8b65f 359 SUPERFAMILY SSF56349 164 342 9.42E-35 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LT40_RS10370 45dc32d3a09cf183c9f473c771b8b65f 359 Gene3D G3DSA:1.10.443.10 164 342 3.5E-46 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS10370 45dc32d3a09cf183c9f473c771b8b65f 359 SUPERFAMILY SSF47823 110 158 2.16E-10 T 23-04-2016 IPR010998 Integrase, Lambda-type, N-terminal LT40_RS10370 45dc32d3a09cf183c9f473c771b8b65f 359 SUPERFAMILY SSF47823 30 80 2.16E-10 T 23-04-2016 IPR010998 Integrase, Lambda-type, N-terminal LT40_RS10370 45dc32d3a09cf183c9f473c771b8b65f 359 PANTHER PTHR30349 32 87 1.5E-16 T 23-04-2016 LT40_RS10370 45dc32d3a09cf183c9f473c771b8b65f 359 PANTHER PTHR30349 113 342 1.5E-16 T 23-04-2016 LT40_RS03405 a93a020bc8daf1ac951135f6d8643419 111 Pfam PF02699 Preprotein translocase subunit 27 100 1.7E-27 T 23-04-2016 IPR003849 Preprotein translocase YajC LT40_RS03405 a93a020bc8daf1ac951135f6d8643419 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 26 103 7.2E-28 T 23-04-2016 IPR003849 Preprotein translocase YajC LT40_RS03405 a93a020bc8daf1ac951135f6d8643419 111 PANTHER PTHR33909:SF1 1 111 3.4E-33 T 23-04-2016 LT40_RS03405 a93a020bc8daf1ac951135f6d8643419 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 43 2.6E-11 T 23-04-2016 IPR003849 Preprotein translocase YajC LT40_RS03405 a93a020bc8daf1ac951135f6d8643419 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 61 79 2.6E-11 T 23-04-2016 IPR003849 Preprotein translocase YajC LT40_RS03405 a93a020bc8daf1ac951135f6d8643419 111 PANTHER PTHR33909 1 111 3.4E-33 T 23-04-2016 LT40_RS03405 a93a020bc8daf1ac951135f6d8643419 111 SMART SM01323 21 103 1.9E-38 T 23-04-2016 IPR003849 Preprotein translocase YajC LT40_RS00075 c6bec162b5fa5a0a9f705228638f7929 247 Pfam PF13649 Methyltransferase domain 63 163 4.3E-11 T 23-04-2016 LT40_RS00075 c6bec162b5fa5a0a9f705228638f7929 247 PIRSF PIRSF006325 2 247 1.2E-106 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 LT40_RS00075 c6bec162b5fa5a0a9f705228638f7929 247 PANTHER PTHR10108 6 246 5.6E-86 T 23-04-2016 LT40_RS00075 c6bec162b5fa5a0a9f705228638f7929 247 Gene3D G3DSA:3.40.50.150 21 245 3.1E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS00075 c6bec162b5fa5a0a9f705228638f7929 247 PANTHER PTHR10108:SF809 6 246 5.6E-86 T 23-04-2016 LT40_RS00075 c6bec162b5fa5a0a9f705228638f7929 247 SUPERFAMILY SSF53335 21 245 1.0E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS00075 c6bec162b5fa5a0a9f705228638f7929 247 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 4 247 39.847 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 LT40_RS00075 c6bec162b5fa5a0a9f705228638f7929 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 6 246 5.6E-88 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 LT40_RS10870 66a2309cfc6648c7c2185ea2af3a2a57 65 Pfam PF02599 Global regulator protein family 1 52 6.5E-27 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS10870 66a2309cfc6648c7c2185ea2af3a2a57 65 PANTHER PTHR34984:SF1 1 53 1.2E-25 T 23-04-2016 LT40_RS10870 66a2309cfc6648c7c2185ea2af3a2a57 65 PANTHER PTHR34984 1 53 1.2E-25 T 23-04-2016 LT40_RS10870 66a2309cfc6648c7c2185ea2af3a2a57 65 SUPERFAMILY SSF117130 1 53 1.05E-20 T 23-04-2016 LT40_RS10870 66a2309cfc6648c7c2185ea2af3a2a57 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 53 9.3E-27 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS10870 66a2309cfc6648c7c2185ea2af3a2a57 65 Hamap MF_00167 Carbon storage regulator [csrA]. 1 63 19.96 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS10870 66a2309cfc6648c7c2185ea2af3a2a57 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 1.0E-19 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 SMART SM00116 260 308 9.9E-5 T 23-04-2016 IPR000644 CBS domain LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 SMART SM00116 319 365 89.0 T 23-04-2016 IPR000644 CBS domain LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 PANTHER PTHR24220 3 296 6.0E-154 T 23-04-2016 LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 SUPERFAMILY SSF54631 260 365 2.93E-17 T 23-04-2016 LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 SMART SM00382 30 225 1.5E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 PANTHER PTHR24220:SF350 3 296 6.0E-154 T 23-04-2016 LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 Pfam PF00571 CBS domain 260 305 4.5E-7 T 23-04-2016 IPR000644 CBS domain LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 Gene3D G3DSA:3.40.50.300 1 239 9.5E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 SUPERFAMILY SSF52540 1 244 6.69E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 Pfam PF00005 ABC transporter 22 167 2.5E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 Gene3D G3DSA:3.10.580.10 260 365 2.9E-17 T 23-04-2016 LT40_RS02980 5a40a62abdcedbddcc196664758fbab0 385 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 18 364 1.3E-102 T 23-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 SUPERFAMILY SSF51735 162 412 4.6E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 SUPERFAMILY SSF53223 9 160 2.73E-51 T 23-04-2016 LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 SMART SM00919 162 398 1.7E-139 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 PIRSF PIRSF000106 46 418 1.1E-70 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 Pfam PF03949 Malic enzyme, NAD binding domain 164 353 1.0E-25 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 PANTHER PTHR23406 370 411 5.2E-172 T 23-04-2016 LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 PANTHER PTHR23406 32 353 5.2E-172 T 23-04-2016 LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 SMART SM01274 17 150 5.8E-78 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 Gene3D G3DSA:3.40.50.720 160 417 3.3E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 Gene3D G3DSA:3.40.50.10380 7 159 3.8E-49 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 LT40_RS14250 4dd9bcb179baf1834094eda94612c807 422 Pfam PF00390 Malic enzyme, N-terminal domain 19 148 2.5E-25 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LT40_RS01515 8013572cc0d580dab2e643ccd9d36add 443 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 1.9E-10 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS01515 8013572cc0d580dab2e643ccd9d36add 443 Gene3D G3DSA:1.10.10.10 4 70 1.7E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01515 8013572cc0d580dab2e643ccd9d36add 443 Gene3D G3DSA:3.40.640.10 116 336 3.9E-67 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS01515 8013572cc0d580dab2e643ccd9d36add 443 SUPERFAMILY SSF46785 4 72 2.47E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01515 8013572cc0d580dab2e643ccd9d36add 443 Pfam PF00155 Aminotransferase class I and II 88 433 8.1E-35 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS01515 8013572cc0d580dab2e643ccd9d36add 443 SMART SM00345 9 68 9.9E-12 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS01515 8013572cc0d580dab2e643ccd9d36add 443 PANTHER PTHR11751 88 432 2.4E-63 T 23-04-2016 LT40_RS01515 8013572cc0d580dab2e643ccd9d36add 443 SUPERFAMILY SSF53383 86 439 5.05E-81 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS10960 84f991e3f5afa3293847778c41ca4524 425 PANTHER PTHR35334 22 425 1.7E-235 T 23-04-2016 LT40_RS10960 84f991e3f5afa3293847778c41ca4524 425 Pfam PF03222 Tryptophan/tyrosine permease family 34 388 3.5E-14 T 23-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 LT40_RS10960 84f991e3f5afa3293847778c41ca4524 425 TIGRFAM TIGR00814 stp: serine transporter 22 414 6.3E-161 T 23-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 LT40_RS10960 84f991e3f5afa3293847778c41ca4524 425 PANTHER PTHR35334:SF2 22 425 1.7E-235 T 23-04-2016 LT40_RS15980 b1a2fe7c8169e0bcce2338d4df65a66d 295 PIRSF PIRSF026649 2 295 2.8E-98 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LT40_RS15980 b1a2fe7c8169e0bcce2338d4df65a66d 295 PANTHER PTHR30606:SF5 7 295 1.1E-116 T 23-04-2016 LT40_RS15980 b1a2fe7c8169e0bcce2338d4df65a66d 295 PANTHER PTHR30606 7 295 1.1E-116 T 23-04-2016 LT40_RS15980 b1a2fe7c8169e0bcce2338d4df65a66d 295 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 286 3.9E-46 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 LT40_RS09620 5d58603f25c10887f3c11f70ebea4809 265 Gene3D G3DSA:3.30.450.40 92 261 2.9E-47 T 23-04-2016 IPR029016 GAF domain-like LT40_RS09620 5d58603f25c10887f3c11f70ebea4809 265 PANTHER PTHR30136 1 262 6.5E-56 T 23-04-2016 LT40_RS09620 5d58603f25c10887f3c11f70ebea4809 265 SMART SM00346 19 108 2.5E-21 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS09620 5d58603f25c10887f3c11f70ebea4809 265 Pfam PF01614 Bacterial transcriptional regulator 138 261 6.3E-23 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal LT40_RS09620 5d58603f25c10887f3c11f70ebea4809 265 SUPERFAMILY SSF55781 89 261 3.07E-44 T 23-04-2016 IPR029016 GAF domain-like LT40_RS09620 5d58603f25c10887f3c11f70ebea4809 265 SUPERFAMILY SSF46785 19 90 2.78E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09620 5d58603f25c10887f3c11f70ebea4809 265 Pfam PF09339 IclR helix-turn-helix domain 21 71 2.2E-11 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS09620 5d58603f25c10887f3c11f70ebea4809 265 Gene3D G3DSA:1.10.10.10 14 88 5.2E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12365 a4aa8817520069d19d1903f09b9bf138 328 SMART SM00062 35 263 0.0015 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS12365 a4aa8817520069d19d1903f09b9bf138 328 Gene3D G3DSA:3.40.190.10 114 225 4.1E-31 T 23-04-2016 LT40_RS12365 a4aa8817520069d19d1903f09b9bf138 328 Pfam PF09084 NMT1/THI5 like 62 250 4.6E-26 T 23-04-2016 IPR015168 SsuA/THI5-like LT40_RS12365 a4aa8817520069d19d1903f09b9bf138 328 PANTHER PTHR30024 1 279 2.3E-46 T 23-04-2016 LT40_RS12365 a4aa8817520069d19d1903f09b9bf138 328 SUPERFAMILY SSF53850 38 262 5.81E-51 T 23-04-2016 LT40_RS12365 a4aa8817520069d19d1903f09b9bf138 328 PANTHER PTHR30024:SF1 1 279 2.3E-46 T 23-04-2016 LT40_RS12365 a4aa8817520069d19d1903f09b9bf138 328 Gene3D G3DSA:3.40.190.10 226 303 2.8E-4 T 23-04-2016 LT40_RS12365 a4aa8817520069d19d1903f09b9bf138 328 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 36 315 3.1E-84 T 23-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 PANTHER PTHR10174:SF116 201 370 5.7E-152 T 23-04-2016 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 PANTHER PTHR10174:SF116 103 179 5.7E-152 T 23-04-2016 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 3.5E-24 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 PIRSF PIRSF000148 1 370 2.3E-65 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 SUPERFAMILY SSF51735 1 147 3.53E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS05590 51819eb7279fb562320a40d52f709700 370 Gene3D G3DSA:3.30.360.10 143 351 3.3E-74 T 23-04-2016 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 SMART SM00859 3 122 1.3E-26 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 368 3.8E-194 T 23-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 23-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 3.3E-60 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.247 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 Gene3D G3DSA:3.40.50.720 1 142 7.4E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS05590 51819eb7279fb562320a40d52f709700 370 PANTHER PTHR10174 201 370 5.7E-152 T 23-04-2016 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 PANTHER PTHR10174 103 179 5.7E-152 T 23-04-2016 LT40_RS05590 51819eb7279fb562320a40d52f709700 370 SUPERFAMILY SSF55347 134 355 1.54E-76 T 23-04-2016 LT40_RS01605 2d793e85c8b61c93de171eea2f9c9c67 506 SUPERFAMILY SSF75304 80 502 4.58E-111 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS01605 2d793e85c8b61c93de171eea2f9c9c67 506 PANTHER PTHR11895:SF34 26 506 1.8E-192 T 23-04-2016 LT40_RS01605 2d793e85c8b61c93de171eea2f9c9c67 506 PANTHER PTHR11895 26 506 1.8E-192 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS01605 2d793e85c8b61c93de171eea2f9c9c67 506 Gene3D G3DSA:3.90.1300.10 82 502 3.9E-112 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS01605 2d793e85c8b61c93de171eea2f9c9c67 506 Pfam PF01425 Amidase 73 488 9.7E-103 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS13515 86c348c9cfdc354e597f989b3d4759b5 365 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 19 322 9.3E-60 T 23-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 LT40_RS13515 86c348c9cfdc354e597f989b3d4759b5 365 PANTHER PTHR35863:SF1 1 360 2.2E-114 T 23-04-2016 LT40_RS13515 86c348c9cfdc354e597f989b3d4759b5 365 PANTHER PTHR35863 1 360 2.2E-114 T 23-04-2016 LT40_RS13515 86c348c9cfdc354e597f989b3d4759b5 365 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 361 27.443 T 23-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 LT40_RS13515 86c348c9cfdc354e597f989b3d4759b5 365 PIRSF PIRSF026782 9 365 2.5E-118 T 23-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 LT40_RS13515 86c348c9cfdc354e597f989b3d4759b5 365 SUPERFAMILY SSF111342 6 288 1.83E-80 T 23-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 LT40_RS13515 86c348c9cfdc354e597f989b3d4759b5 365 Gene3D G3DSA:3.30.2110.10 14 186 2.6E-54 T 23-04-2016 LT40_RS13515 86c348c9cfdc354e597f989b3d4759b5 365 Pfam PF01888 CbiD 12 271 8.3E-86 T 23-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 LT40_RS20030 45c3c66d627aed1c88079868e8018274 397 Gene3D G3DSA:3.40.50.2000 178 355 6.7E-26 T 23-04-2016 LT40_RS20030 45c3c66d627aed1c88079868e8018274 397 PANTHER PTHR12526:SF363 5 378 9.2E-105 T 23-04-2016 LT40_RS20030 45c3c66d627aed1c88079868e8018274 397 Pfam PF00534 Glycosyl transferases group 1 194 355 1.8E-26 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS20030 45c3c66d627aed1c88079868e8018274 397 PANTHER PTHR12526 5 378 9.2E-105 T 23-04-2016 LT40_RS20030 45c3c66d627aed1c88079868e8018274 397 SUPERFAMILY SSF53756 8 375 5.93E-74 T 23-04-2016 LT40_RS20030 45c3c66d627aed1c88079868e8018274 397 Pfam PF13439 Glycosyltransferase Family 4 19 182 9.3E-22 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LT40_RS16960 bc1fe600f2a3c91bf4d9d00081f16d6a 127 PANTHER PTHR11715:SF12 1 127 8.9E-63 T 23-04-2016 LT40_RS16960 bc1fe600f2a3c91bf4d9d00081f16d6a 127 Pfam PF01597 Glycine cleavage H-protein 8 124 2.2E-41 T 23-04-2016 IPR002930 Glycine cleavage system H-protein LT40_RS16960 bc1fe600f2a3c91bf4d9d00081f16d6a 127 SUPERFAMILY SSF51230 4 126 1.57E-39 T 23-04-2016 IPR011053 Single hybrid motif LT40_RS16960 bc1fe600f2a3c91bf4d9d00081f16d6a 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 125 1.1E-45 T 23-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 LT40_RS16960 bc1fe600f2a3c91bf4d9d00081f16d6a 127 PANTHER PTHR11715 1 127 8.9E-63 T 23-04-2016 IPR002930 Glycine cleavage system H-protein LT40_RS16960 bc1fe600f2a3c91bf4d9d00081f16d6a 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site LT40_RS16960 bc1fe600f2a3c91bf4d9d00081f16d6a 127 Gene3D G3DSA:2.40.50.100 7 126 2.0E-46 T 23-04-2016 LT40_RS16960 bc1fe600f2a3c91bf4d9d00081f16d6a 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 29.857 T 23-04-2016 IPR002930 Glycine cleavage system H-protein LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 Pfam PF06490 Flagellar regulatory protein FleQ 6 122 1.6E-29 T 23-04-2016 IPR010518 Flagellar regulatory FleQ LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 SUPERFAMILY SSF52540 145 385 1.26E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 Gene3D G3DSA:3.40.50.300 142 317 2.0E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 Gene3D G3DSA:1.10.10.60 420 479 4.7E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 PANTHER PTHR32071 1 490 2.1E-262 T 23-04-2016 LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 Gene3D G3DSA:1.10.8.60 318 390 5.6E-21 T 23-04-2016 LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 SUPERFAMILY SSF46689 427 479 6.72E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 SUPERFAMILY SSF46689 357 397 6.72E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 Pfam PF00158 Sigma-54 interaction domain 145 312 3.8E-75 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 PANTHER PTHR32071:SF36 1 490 2.1E-262 T 23-04-2016 LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 SUPERFAMILY SSF52172 3 187 3.1E-9 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 Pfam PF02954 Bacterial regulatory protein, Fis family 440 477 9.5E-11 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 SMART SM00382 165 309 5.6E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 231 246 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 460 480 3.25E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS02385 9d50e1a7ed9c5b612b0f42414b20f871 493 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 460 3.25E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS08470 b090a4d27ebedc5166a4c093ae2fd208 258 Gene3D G3DSA:1.10.10.10 3 78 2.3E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08470 b090a4d27ebedc5166a4c093ae2fd208 258 SUPERFAMILY SSF46785 10 78 4.55E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08470 b090a4d27ebedc5166a4c093ae2fd208 258 Pfam PF01614 Bacterial transcriptional regulator 127 228 4.2E-16 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal LT40_RS08470 b090a4d27ebedc5166a4c093ae2fd208 258 Pfam PF09339 IclR helix-turn-helix domain 13 61 2.2E-13 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS08470 b090a4d27ebedc5166a4c093ae2fd208 258 Gene3D G3DSA:3.30.450.40 81 242 5.8E-40 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08470 b090a4d27ebedc5166a4c093ae2fd208 258 PANTHER PTHR30136 5 258 3.5E-41 T 23-04-2016 LT40_RS08470 b090a4d27ebedc5166a4c093ae2fd208 258 SUPERFAMILY SSF55781 69 242 1.44E-34 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08470 b090a4d27ebedc5166a4c093ae2fd208 258 SMART SM00346 10 97 3.8E-17 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS08265 d63ccad84a831afd16727b2336ca09c5 747 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 730 747 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site LT40_RS08265 d63ccad84a831afd16727b2336ca09c5 747 Gene3D G3DSA:2.40.170.20 220 747 2.5E-107 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS08265 d63ccad84a831afd16727b2336ca09c5 747 Gene3D G3DSA:2.170.130.10 63 217 7.2E-26 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS08265 d63ccad84a831afd16727b2336ca09c5 747 PANTHER PTHR32552 4 70 1.4E-184 T 23-04-2016 LT40_RS08265 d63ccad84a831afd16727b2336ca09c5 747 PANTHER PTHR32552 95 747 1.4E-184 T 23-04-2016 LT40_RS08265 d63ccad84a831afd16727b2336ca09c5 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 103 197 8.1E-14 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS08265 d63ccad84a831afd16727b2336ca09c5 747 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 105 747 4.6E-125 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS08265 d63ccad84a831afd16727b2336ca09c5 747 Pfam PF00593 TonB dependent receptor 513 745 4.2E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS08265 d63ccad84a831afd16727b2336ca09c5 747 PANTHER PTHR32552:SF14 4 70 1.4E-184 T 23-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LT40_RS08265 d63ccad84a831afd16727b2336ca09c5 747 PANTHER PTHR32552:SF14 95 747 1.4E-184 T 23-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 LT40_RS08265 d63ccad84a831afd16727b2336ca09c5 747 SUPERFAMILY SSF56935 95 747 2.72E-106 T 23-04-2016 LT40_RS05700 ef696ff626fc19cad9967f4d8f963de6 148 Pfam PF06803 Protein of unknown function (DUF1232) 69 104 5.8E-13 T 23-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 23-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 Gene3D G3DSA:3.30.470.20 96 239 3.4E-56 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 Gene3D G3DSA:3.40.50.261 240 383 4.6E-66 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 Pfam PF08442 ATP-grasp domain 2 203 9.5E-82 T 23-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 PANTHER PTHR11815 1 388 1.2E-229 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 Gene3D G3DSA:3.30.1490.20 21 95 1.6E-35 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 SUPERFAMILY SSF52210 239 384 5.23E-53 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.1E-172 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 PIRSF PIRSF001554 1 388 5.9E-154 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 SUPERFAMILY SSF56059 1 237 5.11E-81 T 23-04-2016 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 Pfam PF00549 CoA-ligase 262 382 6.1E-24 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS12565 940d474dd110dd502520551f1125c8e9 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.487 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 LT40_RS18530 c128520bf2120300e478adb39a5e01db 171 Pfam PF11736 Protein of unknown function (DUF3299) 25 167 1.2E-48 T 23-04-2016 IPR021727 Protein of unknown function DUF3299 LT40_RS16455 bdfc9fd833fa04d7ad24a874ca0c318f 141 PANTHER PTHR30558:SF9 11 136 5.2E-72 T 23-04-2016 LT40_RS16455 bdfc9fd833fa04d7ad24a874ca0c318f 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 9.4E-69 T 23-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 LT40_RS16455 bdfc9fd833fa04d7ad24a874ca0c318f 141 PANTHER PTHR30558 11 136 5.2E-72 T 23-04-2016 LT40_RS16455 bdfc9fd833fa04d7ad24a874ca0c318f 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 133 9.5E-30 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 LT40_RS01595 6b7bc35ea2a3ae4f4297f9729d0ed3c2 202 Pfam PF03861 ANTAR domain 140 191 3.7E-12 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 LT40_RS01595 6b7bc35ea2a3ae4f4297f9729d0ed3c2 202 SUPERFAMILY SSF52172 6 191 1.4E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS01595 6b7bc35ea2a3ae4f4297f9729d0ed3c2 202 SMART SM01012 136 191 2.2E-10 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 LT40_RS01595 6b7bc35ea2a3ae4f4297f9729d0ed3c2 202 PIRSF PIRSF036382 3 197 7.2E-43 T 23-04-2016 IPR008327 Signal transduction response regulator, antiterminator LT40_RS01595 6b7bc35ea2a3ae4f4297f9729d0ed3c2 202 Gene3D G3DSA:3.40.50.2300 4 128 3.7E-46 T 23-04-2016 LT40_RS01595 6b7bc35ea2a3ae4f4297f9729d0ed3c2 202 Gene3D G3DSA:1.10.10.10 150 193 6.0E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS19460 a74dfa703a57f8a67246de367cad47be 145 PANTHER PTHR10516:SF329 132 142 6.9E-20 T 23-04-2016 LT40_RS19460 a74dfa703a57f8a67246de367cad47be 145 PANTHER PTHR10516:SF329 1 91 6.9E-20 T 23-04-2016 LT40_RS19460 a74dfa703a57f8a67246de367cad47be 145 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 140 2.9E-20 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LT40_RS19460 a74dfa703a57f8a67246de367cad47be 145 Gene3D G3DSA:3.10.50.40 129 142 1.0E-22 T 23-04-2016 LT40_RS19460 a74dfa703a57f8a67246de367cad47be 145 Gene3D G3DSA:3.10.50.40 4 83 1.0E-22 T 23-04-2016 LT40_RS19460 a74dfa703a57f8a67246de367cad47be 145 PANTHER PTHR10516 132 142 6.9E-20 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LT40_RS19460 a74dfa703a57f8a67246de367cad47be 145 PANTHER PTHR10516 1 91 6.9E-20 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LT40_RS19460 a74dfa703a57f8a67246de367cad47be 145 SUPERFAMILY SSF54534 6 142 2.16E-38 T 23-04-2016 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 PIRSF PIRSF000429 2 391 3.0E-134 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 Gene3D G3DSA:3.40.47.10 144 187 1.1E-55 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 Gene3D G3DSA:3.40.47.10 272 390 1.1E-55 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 6.8E-135 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 Gene3D G3DSA:3.40.47.10 7 130 2.0E-63 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 Gene3D G3DSA:3.40.47.10 188 271 2.0E-63 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 1.2E-232 T 23-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 SUPERFAMILY SSF53901 4 262 2.23E-80 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 5.2E-48 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 SUPERFAMILY SSF53901 266 390 2.74E-42 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 59.815 T 23-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 PANTHER PTHR18919 3 391 2.4E-195 T 23-04-2016 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 PANTHER PTHR18919:SF69 3 391 2.4E-195 T 23-04-2016 LT40_RS07280 2722bfc6b42591ff67d7def09c0c6874 391 Pfam PF00108 Thiolase, N-terminal domain 8 257 2.7E-84 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LT40_RS08900 d48c3738fd340bf04e56cbef2bd6c26c 292 Gene3D G3DSA:2.40.290.10 4 154 2.0E-7 T 23-04-2016 IPR016194 SPOC-like, C-terminal domain LT40_RS08900 d48c3738fd340bf04e56cbef2bd6c26c 292 Pfam PF02735 Ku70/Ku80 beta-barrel domain 12 194 6.7E-35 T 23-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 LT40_RS08900 d48c3738fd340bf04e56cbef2bd6c26c 292 PANTHER PTHR41251 2 290 1.1E-92 T 23-04-2016 LT40_RS08900 d48c3738fd340bf04e56cbef2bd6c26c 292 PIRSF PIRSF006493 1 292 2.1E-92 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type LT40_RS08900 d48c3738fd340bf04e56cbef2bd6c26c 292 SUPERFAMILY SSF100939 2 264 4.12E-53 T 23-04-2016 IPR016194 SPOC-like, C-terminal domain LT40_RS08900 d48c3738fd340bf04e56cbef2bd6c26c 292 SMART SM00559 53 181 3.8E-38 T 23-04-2016 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: REACT_216|Reactome: REACT_6185 LT40_RS08900 d48c3738fd340bf04e56cbef2bd6c26c 292 PANTHER PTHR41251:SF1 2 290 1.1E-92 T 23-04-2016 LT40_RS08900 d48c3738fd340bf04e56cbef2bd6c26c 292 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 2 261 30.07 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type LT40_RS08900 d48c3738fd340bf04e56cbef2bd6c26c 292 TIGRFAM TIGR02772 Ku_bact: Ku protein 2 261 4.1E-93 T 23-04-2016 IPR009187 Non-homologous end joining protein Ku, prokaryotic type LT40_RS11625 6217792e735e6635f379505abd397734 100 SUPERFAMILY SSF54909 1 94 8.85E-30 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS11625 6217792e735e6635f379505abd397734 100 PANTHER PTHR41521 1 94 1.2E-22 T 23-04-2016 LT40_RS11625 6217792e735e6635f379505abd397734 100 Gene3D G3DSA:3.30.70.900 1 96 8.7E-36 T 23-04-2016 LT40_RS11625 6217792e735e6635f379505abd397734 100 Pfam PF07045 Domain of unknown function (DUF1330) 2 94 1.1E-35 T 23-04-2016 IPR010753 Domain of unknown function DUF1330 LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 292 3.7E-35 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 SMART SM00382 618 809 1.8E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 SMART SM00382 361 550 5.5E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 Gene3D G3DSA:3.40.50.300 337 570 1.3E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 Gene3D G3DSA:3.40.50.300 592 819 3.0E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 SUPERFAMILY SSF52540 593 825 3.15E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 552 573 9.2E-10 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 PANTHER PTHR24220:SF568 595 826 3.6E-95 T 23-04-2016 LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 ProSitePatterns PS00211 ABC transporters family signature. 727 741 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 SUPERFAMILY SSF52540 337 573 9.3E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 PANTHER PTHR24220 595 826 3.6E-95 T 23-04-2016 LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 Pfam PF00005 ABC transporter 353 502 8.9E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS00275 7dd934041cfb923315d2f5d83e3fa674 830 Pfam PF00005 ABC transporter 610 754 8.4E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS00700 febdb0f2fb9e2564c54707f6d2dc185d 326 Gene3D G3DSA:3.40.718.10 1 324 1.3E-120 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LT40_RS00700 febdb0f2fb9e2564c54707f6d2dc185d 326 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 326 137.149 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 LT40_RS00700 febdb0f2fb9e2564c54707f6d2dc185d 326 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 323 9.8E-96 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 LT40_RS00700 febdb0f2fb9e2564c54707f6d2dc185d 326 PIRSF PIRSF002465 1 325 7.4E-116 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 LT40_RS00700 febdb0f2fb9e2564c54707f6d2dc185d 326 Pfam PF02504 Fatty acid synthesis protein 1 315 9.5E-95 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 LT40_RS00700 febdb0f2fb9e2564c54707f6d2dc185d 326 PANTHER PTHR30100:SF1 1 326 9.8E-120 T 23-04-2016 LT40_RS00700 febdb0f2fb9e2564c54707f6d2dc185d 326 SUPERFAMILY SSF53659 1 324 1.93E-97 T 23-04-2016 LT40_RS00700 febdb0f2fb9e2564c54707f6d2dc185d 326 PANTHER PTHR30100 1 326 9.8E-120 T 23-04-2016 LT40_RS08555 f66e80cede65311145dd0be189d194e1 397 PANTHER PTHR33121:SF10 172 397 1.4E-44 T 23-04-2016 LT40_RS08555 f66e80cede65311145dd0be189d194e1 397 SMART SM00065 18 166 6.8E-5 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS08555 f66e80cede65311145dd0be189d194e1 397 Gene3D G3DSA:3.30.450.40 22 157 4.8E-8 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08555 f66e80cede65311145dd0be189d194e1 397 PANTHER PTHR33121 172 397 1.4E-44 T 23-04-2016 LT40_RS08555 f66e80cede65311145dd0be189d194e1 397 Gene3D G3DSA:3.20.20.450 175 396 1.2E-53 T 23-04-2016 IPR001633 EAL domain LT40_RS08555 f66e80cede65311145dd0be189d194e1 397 SMART SM00052 165 397 1.6E-33 T 23-04-2016 IPR001633 EAL domain LT40_RS08555 f66e80cede65311145dd0be189d194e1 397 SUPERFAMILY SSF55781 23 157 2.07E-15 T 23-04-2016 IPR029016 GAF domain-like LT40_RS08555 f66e80cede65311145dd0be189d194e1 397 SUPERFAMILY SSF141868 174 396 2.48E-58 T 23-04-2016 IPR001633 EAL domain LT40_RS08555 f66e80cede65311145dd0be189d194e1 397 Pfam PF01590 GAF domain 24 154 4.8E-6 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS08555 f66e80cede65311145dd0be189d194e1 397 Pfam PF00563 EAL domain 177 394 9.4E-50 T 23-04-2016 IPR001633 EAL domain LT40_RS00465 176777a2f912ab6b90668d154855f2c1 146 PANTHER PTHR30272 1 146 5.9E-82 T 23-04-2016 LT40_RS00465 176777a2f912ab6b90668d154855f2c1 146 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 142 7.4E-64 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LT40_RS00465 176777a2f912ab6b90668d154855f2c1 146 Pfam PF07977 FabA-like domain 11 137 8.8E-39 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LT40_RS00465 176777a2f912ab6b90668d154855f2c1 146 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 145 35.655 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LT40_RS00465 176777a2f912ab6b90668d154855f2c1 146 SUPERFAMILY SSF54637 1 142 2.6E-52 T 23-04-2016 IPR029069 HotDog domain LT40_RS00465 176777a2f912ab6b90668d154855f2c1 146 Gene3D G3DSA:3.10.129.10 1 142 7.0E-59 T 23-04-2016 IPR029069 HotDog domain LT40_RS14530 4af9b126712cd065cc073819fa6be11c 685 SMART SM00283 413 674 9.7E-85 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS14530 4af9b126712cd065cc073819fa6be11c 685 SUPERFAMILY SSF58104 376 677 3.31E-65 T 23-04-2016 LT40_RS14530 4af9b126712cd065cc073819fa6be11c 685 Gene3D G3DSA:1.10.287.950 428 645 2.7E-51 T 23-04-2016 LT40_RS14530 4af9b126712cd065cc073819fa6be11c 685 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 673 2.2E-46 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS14530 4af9b126712cd065cc073819fa6be11c 685 PANTHER PTHR32089:SF43 381 677 3.4E-114 T 23-04-2016 LT40_RS14530 4af9b126712cd065cc073819fa6be11c 685 PANTHER PTHR32089 381 677 3.4E-114 T 23-04-2016 LT40_RS14530 4af9b126712cd065cc073819fa6be11c 685 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 39 148 8.1E-25 T 23-04-2016 IPR029095 NarX-like, N-terminal LT40_RS09225 f7631931b5bfd45f51fe2bb0f8999e4a 285 SUPERFAMILY SSF53448 2 213 1.59E-50 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09225 f7631931b5bfd45f51fe2bb0f8999e4a 285 PANTHER PTHR22916:SF17 5 284 4.2E-77 T 23-04-2016 LT40_RS09225 f7631931b5bfd45f51fe2bb0f8999e4a 285 Gene3D G3DSA:3.90.550.10 5 229 3.5E-52 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09225 f7631931b5bfd45f51fe2bb0f8999e4a 285 Pfam PF00535 Glycosyl transferase family 2 8 166 7.2E-29 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS09225 f7631931b5bfd45f51fe2bb0f8999e4a 285 PANTHER PTHR22916 5 284 4.2E-77 T 23-04-2016 LT40_RS13960 1d4dcd7d36bdf86ef964cbe00f00380d 332 Pfam PF13449 Esterase-like activity of phytase 41 189 2.1E-9 T 23-04-2016 IPR027372 Phytase-like domain LT40_RS13960 1d4dcd7d36bdf86ef964cbe00f00380d 332 SUPERFAMILY SSF101898 42 82 8.11E-7 T 23-04-2016 LT40_RS13960 1d4dcd7d36bdf86ef964cbe00f00380d 332 SUPERFAMILY SSF101898 110 312 8.11E-7 T 23-04-2016 LT40_RS18020 59f97767a8086c77cb087a2edbb8c7be 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 2.3E-25 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LT40_RS18020 59f97767a8086c77cb087a2edbb8c7be 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 1.0E-9 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LT40_RS18020 59f97767a8086c77cb087a2edbb8c7be 71 PANTHER PTHR21109 1 63 1.3E-25 T 23-04-2016 LT40_RS18020 59f97767a8086c77cb087a2edbb8c7be 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.2E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LT40_RS18020 59f97767a8086c77cb087a2edbb8c7be 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.2E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LT40_RS18020 59f97767a8086c77cb087a2edbb8c7be 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.2E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LT40_RS18020 59f97767a8086c77cb087a2edbb8c7be 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.2E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LT40_RS18020 59f97767a8086c77cb087a2edbb8c7be 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.978 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LT40_RS18020 59f97767a8086c77cb087a2edbb8c7be 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 23-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18020 59f97767a8086c77cb087a2edbb8c7be 71 Pfam PF01165 Ribosomal protein S21 4 56 2.3E-22 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 LT40_RS18225 d6361622349ce99f1775924f782b53bc 363 SUPERFAMILY SSF53067 138 335 6.22E-28 T 23-04-2016 LT40_RS18225 d6361622349ce99f1775924f782b53bc 363 SUPERFAMILY SSF53067 63 108 6.22E-28 T 23-04-2016 LT40_RS18225 d6361622349ce99f1775924f782b53bc 363 SUPERFAMILY SSF53067 3 36 6.22E-28 T 23-04-2016 LT40_RS18225 d6361622349ce99f1775924f782b53bc 363 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 2 363 40.466 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 LT40_RS18225 d6361622349ce99f1775924f782b53bc 363 PANTHER PTHR30605 1 362 1.7E-154 T 23-04-2016 LT40_RS18225 d6361622349ce99f1775924f782b53bc 363 Gene3D G3DSA:3.30.420.40 2 191 2.0E-70 T 23-04-2016 LT40_RS18225 d6361622349ce99f1775924f782b53bc 363 PANTHER PTHR30605:SF0 1 362 1.7E-154 T 23-04-2016 LT40_RS18225 d6361622349ce99f1775924f782b53bc 363 Pfam PF03702 Uncharacterised protein family (UPF0075) 3 363 2.0E-154 T 23-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 Gene3D G3DSA:3.40.190.80 161 260 3.0E-39 T 23-04-2016 LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 PANTHER PTHR20854:SF5 1 273 5.0E-80 T 23-04-2016 LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 SUPERFAMILY SSF56655 4 269 1.14E-73 T 23-04-2016 LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 PANTHER PTHR20854 1 273 5.0E-80 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 7 258 7.9E-89 T 23-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 216 240 6.8E-12 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 6.8E-12 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 6.8E-12 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 6.8E-12 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 Gene3D G3DSA:3.30.540.10 3 160 1.7E-44 T 23-04-2016 LT40_RS17250 2eef6cb3636e3b9abbbdcff6cb2b776b 275 Pfam PF00459 Inositol monophosphatase family 8 250 2.1E-49 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 LT40_RS15575 0f850848947237c4f12b1a550ce36c0d 497 PANTHER PTHR21432 1 494 2.5E-265 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 LT40_RS15575 0f850848947237c4f12b1a550ce36c0d 497 SUPERFAMILY SSF100950 4 222 2.17E-71 T 23-04-2016 LT40_RS15575 0f850848947237c4f12b1a550ce36c0d 497 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 11 494 8.3E-228 T 23-04-2016 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 LT40_RS15575 0f850848947237c4f12b1a550ce36c0d 497 Gene3D G3DSA:3.40.1080.10 11 220 2.5E-43 T 23-04-2016 LT40_RS15575 0f850848947237c4f12b1a550ce36c0d 497 Gene3D G3DSA:3.40.810.20 225 490 1.1E-80 T 23-04-2016 LT40_RS15575 0f850848947237c4f12b1a550ce36c0d 497 SUPERFAMILY SSF100950 225 494 5.86E-87 T 23-04-2016 LT40_RS15575 0f850848947237c4f12b1a550ce36c0d 497 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 11 215 4.2E-29 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 LT40_RS15575 0f850848947237c4f12b1a550ce36c0d 497 PANTHER PTHR21432:SF10 1 494 2.5E-265 T 23-04-2016 LT40_RS15575 0f850848947237c4f12b1a550ce36c0d 497 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 326 461 1.4E-41 T 23-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain LT40_RS20430 de89cb2017d427e16f925356a9469d54 250 Gene3D G3DSA:1.10.3680.10 95 243 6.5E-25 T 23-04-2016 IPR029024 TerB-like LT40_RS20430 de89cb2017d427e16f925356a9469d54 250 Pfam PF04391 Protein of unknown function (DUF533) 62 242 1.1E-66 T 23-04-2016 IPR007486 Inner membrane protein YebE LT40_RS20430 de89cb2017d427e16f925356a9469d54 250 SUPERFAMILY SSF158682 96 244 2.35E-26 T 23-04-2016 IPR029024 TerB-like LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 4.5E-42 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 SUPERFAMILY SSF55973 6 111 5.1E-45 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 365 7.1E-66 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 394 55.67 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 Gene3D G3DSA:3.30.300.10 245 394 2.8E-68 T 23-04-2016 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 Gene3D G3DSA:3.30.300.10 12 134 1.2E-45 T 23-04-2016 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 PIRSF PIRSF000497 1 395 1.7E-166 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 SUPERFAMILY SSF55973 112 233 7.06E-50 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 Gene3D G3DSA:3.30.300.10 135 234 1.4E-39 T 23-04-2016 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 SUPERFAMILY SSF55973 234 395 9.03E-66 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 PANTHER PTHR11964 6 389 5.0E-257 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 101 3.1E-40 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS17320 48f03a7b309c5f0827d00b2b6c9593c9 397 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 392 4.6E-181 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 LT40_RS08085 363a916acf5509407d70aefce5a044ae 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 220 4.2E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS08085 363a916acf5509407d70aefce5a044ae 233 PANTHER PTHR26402:SF552 1 232 1.9E-81 T 23-04-2016 LT40_RS08085 363a916acf5509407d70aefce5a044ae 233 SMART SM00862 146 220 2.3E-13 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS08085 363a916acf5509407d70aefce5a044ae 233 Pfam PF00072 Response regulator receiver domain 3 113 6.6E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS08085 363a916acf5509407d70aefce5a044ae 233 PANTHER PTHR26402 1 232 1.9E-81 T 23-04-2016 LT40_RS08085 363a916acf5509407d70aefce5a044ae 233 Gene3D G3DSA:3.40.50.2300 1 125 1.9E-35 T 23-04-2016 LT40_RS08085 363a916acf5509407d70aefce5a044ae 233 SUPERFAMILY SSF52172 1 172 2.99E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS08085 363a916acf5509407d70aefce5a044ae 233 SMART SM00448 1 113 3.1E-40 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS08085 363a916acf5509407d70aefce5a044ae 233 Gene3D G3DSA:1.10.10.10 126 223 6.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10650 5fd0f74e335fde4c0c70f61a86414c47 253 SUPERFAMILY SSF52540 9 240 1.98E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10650 5fd0f74e335fde4c0c70f61a86414c47 253 PANTHER PTHR24220 2 250 2.0E-108 T 23-04-2016 LT40_RS10650 5fd0f74e335fde4c0c70f61a86414c47 253 SMART SM00382 25 221 9.3E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10650 5fd0f74e335fde4c0c70f61a86414c47 253 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS10650 5fd0f74e335fde4c0c70f61a86414c47 253 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 1 253 1.0E-116 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 LT40_RS10650 5fd0f74e335fde4c0c70f61a86414c47 253 Pfam PF00005 ABC transporter 19 169 2.4E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS10650 5fd0f74e335fde4c0c70f61a86414c47 253 Gene3D G3DSA:3.40.50.300 9 244 8.8E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10650 5fd0f74e335fde4c0c70f61a86414c47 253 PANTHER PTHR24220:SF585 2 250 2.0E-108 T 23-04-2016 LT40_RS08355 c43fcd15545d55e46b839599bbdc0158 194 PANTHER PTHR35525:SF3 1 194 3.0E-42 T 23-04-2016 LT40_RS08355 c43fcd15545d55e46b839599bbdc0158 194 PANTHER PTHR35525 1 194 3.0E-42 T 23-04-2016 LT40_RS08355 c43fcd15545d55e46b839599bbdc0158 194 Pfam PF11706 CGNR zinc finger 149 191 4.9E-19 T 23-04-2016 IPR021005 Zinc finger, CGNR LT40_RS08355 c43fcd15545d55e46b839599bbdc0158 194 Gene3D G3DSA:1.10.3300.10 9 192 8.4E-52 T 23-04-2016 IPR023286 ABATE domain LT40_RS08355 c43fcd15545d55e46b839599bbdc0158 194 Pfam PF07336 Putative stress-induced transcription regulator 16 143 8.6E-21 T 23-04-2016 IPR010852 Putative stress-induced transcription regulator LT40_RS08355 c43fcd15545d55e46b839599bbdc0158 194 SUPERFAMILY SSF160904 9 190 9.02E-48 T 23-04-2016 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 PANTHER PTHR21432 6 64 4.1E-147 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 PANTHER PTHR21432 353 579 4.1E-147 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 PANTHER PTHR21432 308 334 4.1E-147 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 PANTHER PTHR21432 93 275 4.1E-147 T 23-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 361 524 6.5E-43 T 23-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain LT40_RS16620 9531ef74aafc719b800c387764c60312 649 Gene3D G3DSA:3.40.810.20 407 502 1.6E-7 T 23-04-2016 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 SUPERFAMILY SSF100950 300 553 1.47E-43 T 23-04-2016 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 SUPERFAMILY SSF100950 224 268 1.47E-43 T 23-04-2016 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 Gene3D G3DSA:3.30.750.70 224 269 2.4E-34 T 23-04-2016 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 Gene3D G3DSA:3.30.750.70 303 375 2.4E-34 T 23-04-2016 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 PANTHER PTHR21432:SF18 6 64 4.1E-147 T 23-04-2016 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 PANTHER PTHR21432:SF18 353 579 4.1E-147 T 23-04-2016 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 PANTHER PTHR21432:SF18 308 334 4.1E-147 T 23-04-2016 LT40_RS16620 9531ef74aafc719b800c387764c60312 649 PANTHER PTHR21432:SF18 93 275 4.1E-147 T 23-04-2016 LT40_RS18360 b2396c854d7ff93c4613bf32e72d6d0d 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.777 T 23-04-2016 IPR013005 50S ribosomal protein uL4 LT40_RS18360 b2396c854d7ff93c4613bf32e72d6d0d 200 PANTHER PTHR10746 10 200 7.1E-84 T 23-04-2016 IPR013005 50S ribosomal protein uL4 LT40_RS18360 b2396c854d7ff93c4613bf32e72d6d0d 200 SUPERFAMILY SSF52166 4 199 7.98E-71 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 LT40_RS18360 b2396c854d7ff93c4613bf32e72d6d0d 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 11 197 7.2E-73 T 23-04-2016 IPR013005 50S ribosomal protein uL4 LT40_RS18360 b2396c854d7ff93c4613bf32e72d6d0d 200 Pfam PF00573 Ribosomal protein L4/L1 family 11 197 1.1E-62 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 LT40_RS18360 b2396c854d7ff93c4613bf32e72d6d0d 200 Gene3D G3DSA:3.40.1370.10 52 199 3.2E-57 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 LT40_RS01225 1786029e6de6910c84f3cdc88ab28555 434 Gene3D G3DSA:1.20.1250.20 10 207 4.9E-40 T 23-04-2016 LT40_RS01225 1786029e6de6910c84f3cdc88ab28555 434 PANTHER PTHR11662 4 427 2.8E-121 T 23-04-2016 LT40_RS01225 1786029e6de6910c84f3cdc88ab28555 434 Gene3D G3DSA:1.20.1250.20 231 425 2.5E-22 T 23-04-2016 LT40_RS01225 1786029e6de6910c84f3cdc88ab28555 434 Pfam PF07690 Major Facilitator Superfamily 19 380 2.4E-43 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS01225 1786029e6de6910c84f3cdc88ab28555 434 SUPERFAMILY SSF103473 8 424 3.79E-76 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS01225 1786029e6de6910c84f3cdc88ab28555 434 PANTHER PTHR11662:SF3 4 427 2.8E-121 T 23-04-2016 LT40_RS02840 94997dcf3f20b7369b49022219c71767 122 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 17 105 2.1E-20 T 23-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 LT40_RS02840 94997dcf3f20b7369b49022219c71767 122 PANTHER PTHR34703 8 98 2.6E-17 T 23-04-2016 LT40_RS02840 94997dcf3f20b7369b49022219c71767 122 Pfam PF03334 Na+/H+ antiporter subunit 18 98 1.1E-20 T 23-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 LT40_RS11230 a2cfa9407b4a8bcc39443a87ee157fe1 240 Pfam PF02678 Pirin 10 119 2.1E-34 T 23-04-2016 IPR003829 Pirin, N-terminal domain LT40_RS11230 a2cfa9407b4a8bcc39443a87ee157fe1 240 SUPERFAMILY SSF51182 1 233 9.83E-75 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS11230 a2cfa9407b4a8bcc39443a87ee157fe1 240 PIRSF PIRSF006232 1 239 1.8E-51 T 23-04-2016 IPR012093 Pirin LT40_RS11230 a2cfa9407b4a8bcc39443a87ee157fe1 240 PANTHER PTHR13903 1 239 4.2E-106 T 23-04-2016 IPR012093 Pirin LT40_RS11230 a2cfa9407b4a8bcc39443a87ee157fe1 240 PANTHER PTHR13903:SF7 1 239 4.2E-106 T 23-04-2016 LT40_RS11230 a2cfa9407b4a8bcc39443a87ee157fe1 240 Gene3D G3DSA:2.60.120.10 4 235 2.9E-75 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS15920 55cc0a39d6aa3cf5997a64f6e84dfd43 505 Gene3D G3DSA:3.40.720.10 2 366 8.3E-97 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LT40_RS15920 55cc0a39d6aa3cf5997a64f6e84dfd43 505 ProSitePatterns PS00149 Sulfatases signature 2. 92 102 - T 23-04-2016 IPR024607 Sulfatase, conserved site LT40_RS15920 55cc0a39d6aa3cf5997a64f6e84dfd43 505 Pfam PF00884 Sulfatase 4 345 8.0E-54 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LT40_RS15920 55cc0a39d6aa3cf5997a64f6e84dfd43 505 Gene3D G3DSA:3.30.1120.10 368 440 9.0E-8 T 23-04-2016 LT40_RS15920 55cc0a39d6aa3cf5997a64f6e84dfd43 505 PANTHER PTHR10342 2 458 8.1E-130 T 23-04-2016 LT40_RS15920 55cc0a39d6aa3cf5997a64f6e84dfd43 505 PANTHER PTHR10342:SF207 2 458 8.1E-130 T 23-04-2016 LT40_RS15920 55cc0a39d6aa3cf5997a64f6e84dfd43 505 Pfam PF12411 Choline sulfatase enzyme C terminal 446 498 7.7E-28 T 23-04-2016 IPR025863 Choline sulfatase enzyme C-terminal domain UniPathway: UPA00290 LT40_RS15920 55cc0a39d6aa3cf5997a64f6e84dfd43 505 SUPERFAMILY SSF53649 2 431 3.49E-114 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LT40_RS15920 55cc0a39d6aa3cf5997a64f6e84dfd43 505 TIGRFAM TIGR03417 chol_sulfatase: choline-sulfatase 3 499 4.3E-260 T 23-04-2016 IPR017785 Choline-sulfatase UniPathway: UPA00290 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 Gene3D G3DSA:2.40.10.10 169 281 2.3E-42 T 23-04-2016 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 SUPERFAMILY SSF50494 51 272 5.54E-62 T 23-04-2016 IPR009003 Peptidase S1, PA clan LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 SMART SM00228 280 362 6.3E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 PANTHER PTHR22939 1 375 3.2E-162 T 23-04-2016 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 Gene3D G3DSA:2.40.10.10 54 168 1.0E-33 T 23-04-2016 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 SUPERFAMILY SSF50156 239 363 1.97E-24 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 PRINTS PR00834 HtrA/DegQ protease family signature 320 332 5.7E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 5.7E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 5.7E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 PRINTS PR00834 HtrA/DegQ protease family signature 137 157 5.7E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 PRINTS PR00834 HtrA/DegQ protease family signature 116 128 5.7E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 5.7E-54 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 Pfam PF13180 PDZ domain 281 370 8.5E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 PANTHER PTHR22939:SF93 1 375 3.2E-162 T 23-04-2016 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 Gene3D G3DSA:2.30.42.10 282 375 8.6E-27 T 23-04-2016 IPR001478 PDZ domain GO:0005515 LT40_RS03875 d488a9b1a241a74dfa0e83b8733c0a0d 387 Pfam PF13365 Trypsin-like peptidase domain 107 241 3.1E-29 T 23-04-2016 LT40_RS14560 760b5d3d590237a26efd772bcf1ed720 189 PANTHER PTHR30327 8 189 6.8E-56 T 23-04-2016 LT40_RS14560 760b5d3d590237a26efd772bcf1ed720 189 SUPERFAMILY SSF143456 8 189 2.62E-58 T 23-04-2016 LT40_RS14560 760b5d3d590237a26efd772bcf1ed720 189 Gene3D G3DSA:3.40.1740.10 133 179 5.0E-30 T 23-04-2016 LT40_RS14560 760b5d3d590237a26efd772bcf1ed720 189 Gene3D G3DSA:3.40.1740.10 5 46 5.0E-30 T 23-04-2016 LT40_RS14560 760b5d3d590237a26efd772bcf1ed720 189 PANTHER PTHR30327:SF1 8 189 6.8E-56 T 23-04-2016 LT40_RS14560 760b5d3d590237a26efd772bcf1ed720 189 Gene3D G3DSA:3.30.70.1300 49 132 1.9E-22 T 23-04-2016 LT40_RS14560 760b5d3d590237a26efd772bcf1ed720 189 Pfam PF02622 Uncharacterized ACR, COG1678 18 176 4.1E-43 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 LT40_RS14560 760b5d3d590237a26efd772bcf1ed720 189 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 7 189 35.185 T 23-04-2016 IPR003774 Protein of unknown function UPF0301 LT40_RS08420 b5c87dfc7336ba56da1fda9ec5179301 168 Gene3D G3DSA:3.30.1950.10 27 92 2.7E-18 T 23-04-2016 LT40_RS08420 b5c87dfc7336ba56da1fda9ec5179301 168 Pfam PF10531 SLBB domain 99 144 1.5E-11 T 23-04-2016 IPR019554 Soluble ligand binding domain LT40_RS08420 b5c87dfc7336ba56da1fda9ec5179301 168 Pfam PF02563 Polysaccharide biosynthesis/export protein 18 93 4.8E-19 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 LT40_RS08420 b5c87dfc7336ba56da1fda9ec5179301 168 PANTHER PTHR33619 1 161 4.8E-35 T 23-04-2016 LT40_RS08420 b5c87dfc7336ba56da1fda9ec5179301 168 Gene3D G3DSA:3.10.560.10 93 152 1.2E-11 T 23-04-2016 LT40_RS07025 18d0a28e157dbfbf17d4e729bf9f9b63 479 SUPERFAMILY SSF53720 4 475 1.31E-150 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS07025 18d0a28e157dbfbf17d4e729bf9f9b63 479 Pfam PF00171 Aldehyde dehydrogenase family 14 472 2.1E-154 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS07025 18d0a28e157dbfbf17d4e729bf9f9b63 479 Gene3D G3DSA:3.40.309.10 261 447 1.0E-67 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS07025 18d0a28e157dbfbf17d4e729bf9f9b63 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS07025 18d0a28e157dbfbf17d4e729bf9f9b63 479 Gene3D G3DSA:3.40.605.10 8 260 2.1E-79 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS07025 18d0a28e157dbfbf17d4e729bf9f9b63 479 PANTHER PTHR11699 4 475 5.1E-185 T 23-04-2016 LT40_RS07025 18d0a28e157dbfbf17d4e729bf9f9b63 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 PIRSF PIRSF000535 10 304 1.1E-27 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 Gene3D G3DSA:3.40.1190.20 2 304 1.9E-99 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 Pfam PF00294 pfkB family carbohydrate kinase 3 296 2.0E-75 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 SUPERFAMILY SSF53613 4 304 1.51E-89 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 PANTHER PTHR10584 1 305 2.0E-99 T 23-04-2016 LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 302 2.8E-113 T 23-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 PANTHER PTHR10584:SF166 1 305 2.0E-99 T 23-04-2016 LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 PRINTS PR00990 Ribokinase signature 175 190 5.9E-37 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 PRINTS PR00990 Ribokinase signature 7 28 5.9E-37 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 PRINTS PR00990 Ribokinase signature 219 230 5.9E-37 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 PRINTS PR00990 Ribokinase signature 106 119 5.9E-37 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LT40_RS07465 9511e8721e51a699cad3e41d703da312 305 PRINTS PR00990 Ribokinase signature 34 53 5.9E-37 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 LT40_RS20315 08725bda5910e3ee2962dbfc8ebdb91c 174 PANTHER PTHR13061 13 171 1.1E-73 T 23-04-2016 LT40_RS20315 08725bda5910e3ee2962dbfc8ebdb91c 174 Gene3D G3DSA:2.160.10.10 3 167 1.1E-49 T 23-04-2016 LT40_RS20315 08725bda5910e3ee2962dbfc8ebdb91c 174 SUPERFAMILY SSF51161 4 169 1.66E-48 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS20315 08725bda5910e3ee2962dbfc8ebdb91c 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 6.5E-8 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS08965 fd115d923bd61b60888db7f8a9657c84 288 Pfam PF02625 XdhC and CoxI family 12 75 1.3E-18 T 23-04-2016 IPR003777 XdhC- CoxI LT40_RS08965 fd115d923bd61b60888db7f8a9657c84 288 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 19 249 1.8E-98 T 23-04-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC LT40_RS08965 fd115d923bd61b60888db7f8a9657c84 288 Pfam PF13478 XdhC Rossmann domain 106 248 7.3E-38 T 23-04-2016 IPR027051 XdhC Rossmann domain LT40_RS08965 fd115d923bd61b60888db7f8a9657c84 288 Gene3D G3DSA:3.40.50.720 85 138 1.4E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08965 fd115d923bd61b60888db7f8a9657c84 288 PANTHER PTHR30388:SF5 1 280 1.7E-120 T 23-04-2016 LT40_RS08965 fd115d923bd61b60888db7f8a9657c84 288 PANTHER PTHR30388 1 280 1.7E-120 T 23-04-2016 LT40_RS08965 fd115d923bd61b60888db7f8a9657c84 288 SUPERFAMILY SSF51735 103 178 2.44E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS13105 1cea5ccc84be828e8f1a0c6d35d6fb67 316 SUPERFAMILY SSF161098 92 297 2.09E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13105 1cea5ccc84be828e8f1a0c6d35d6fb67 316 PANTHER PTHR30465:SF24 1 315 5.7E-130 T 23-04-2016 LT40_RS13105 1cea5ccc84be828e8f1a0c6d35d6fb67 316 PANTHER PTHR30465 1 315 5.7E-130 T 23-04-2016 LT40_RS13105 1cea5ccc84be828e8f1a0c6d35d6fb67 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 314 1.1E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13105 1cea5ccc84be828e8f1a0c6d35d6fb67 316 Gene3D G3DSA:1.10.3720.10 92 306 7.0E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11110 354bbf25502d95917f601b0ca7354fe9 431 Pfam PF01566 Natural resistance-associated macrophage protein 43 405 1.1E-49 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 LT40_RS18050 07e4307046c93934cc81dcbf8d88db2f 520 PANTHER PTHR30029 6 510 2.6E-230 T 23-04-2016 LT40_RS18050 07e4307046c93934cc81dcbf8d88db2f 520 Pfam PF04293 SpoVR like protein 16 447 2.4E-178 T 23-04-2016 IPR007390 Sporulation stage V, protein R LT40_RS18050 07e4307046c93934cc81dcbf8d88db2f 520 PANTHER PTHR30029:SF2 6 510 2.6E-230 T 23-04-2016 LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 PANTHER PTHR24423 86 371 1.1E-39 T 23-04-2016 LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 PANTHER PTHR24423 1 29 1.1E-39 T 23-04-2016 LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 3 106 1.9E-6 T 23-04-2016 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 Gene3D G3DSA:1.10.287.130 145 201 9.5E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 Gene3D G3DSA:3.30.565.10 202 372 8.6E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 260 371 8.7E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 SUPERFAMILY SSF47384 144 213 1.43E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 352 3.1E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 371 3.1E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 310 3.1E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 SMART SM00387 259 374 7.3E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 Pfam PF00512 His Kinase A (phospho-acceptor) domain 150 213 2.5E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 SMART SM00388 149 215 3.2E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS00380 f9ec6e118694e53920fa36eb8155815e 385 SUPERFAMILY SSF55874 205 372 7.99E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 SUPERFAMILY SSF54980 398 513 1.25E-26 T 23-04-2016 IPR009022 Elongation factor G, III-V domain LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 Gene3D G3DSA:2.40.30.10 206 303 3.8E-24 T 23-04-2016 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 Pfam PF00679 Elongation factor G C-terminus 397 477 1.2E-21 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.4E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.4E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.4E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.4E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 PANTHER PTHR23115:SF14 3 602 7.6E-292 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 Pfam PF03144 Elongation factor Tu domain 2 219 289 5.5E-10 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 SUPERFAMILY SSF52540 3 207 3.86E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 PANTHER PTHR23115 3 602 7.6E-292 T 23-04-2016 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 SUPERFAMILY SSF54980 302 387 7.55E-15 T 23-04-2016 IPR009022 Elongation factor G, III-V domain LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 2.7E-55 T 23-04-2016 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 SUPERFAMILY SSF50447 151 299 2.7E-31 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 Gene3D G3DSA:3.40.50.300 3 205 7.0E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 1.4E-283 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 139 8.3E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 Gene3D G3DSA:3.30.70.870 304 399 4.6E-36 T 23-04-2016 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 Gene3D G3DSA:2.40.50.250 483 577 1.2E-39 T 23-04-2016 LT40_RS14435 735b02667b26d39fa4aa3541c9ede73b 606 Gene3D G3DSA:3.30.70.240 400 478 9.3E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain LT40_RS08170 2bb0387fd246a66fd004d5ec7421d89d 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 48 222 1.9E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS08170 2bb0387fd246a66fd004d5ec7421d89d 226 Gene3D G3DSA:1.10.3720.10 15 222 1.4E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS08170 2bb0387fd246a66fd004d5ec7421d89d 226 SUPERFAMILY SSF161098 17 209 4.97E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS08170 2bb0387fd246a66fd004d5ec7421d89d 226 PANTHER PTHR30614 1 226 3.0E-75 T 23-04-2016 LT40_RS08170 2bb0387fd246a66fd004d5ec7421d89d 226 PANTHER PTHR30614:SF14 1 226 3.0E-75 T 23-04-2016 LT40_RS08170 2bb0387fd246a66fd004d5ec7421d89d 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 117 2.4E-23 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS04175 5c51f85b89024a1a87cf74a0dadbc04e 226 PANTHER PTHR10108 7 222 4.7E-50 T 23-04-2016 LT40_RS04175 5c51f85b89024a1a87cf74a0dadbc04e 226 PANTHER PTHR10108:SF855 7 222 4.7E-50 T 23-04-2016 LT40_RS04175 5c51f85b89024a1a87cf74a0dadbc04e 226 Gene3D G3DSA:3.40.50.150 13 212 7.5E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS04175 5c51f85b89024a1a87cf74a0dadbc04e 226 Pfam PF13649 Methyltransferase domain 55 150 4.9E-14 T 23-04-2016 LT40_RS04175 5c51f85b89024a1a87cf74a0dadbc04e 226 SUPERFAMILY SSF53335 12 222 2.41E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS12060 7f030159524e3cba8e99e57320a4b8ee 394 Pfam PF00072 Response regulator receiver domain 9 110 4.0E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS12060 7f030159524e3cba8e99e57320a4b8ee 394 Gene3D G3DSA:3.40.50.2300 6 147 7.5E-37 T 23-04-2016 LT40_RS12060 7f030159524e3cba8e99e57320a4b8ee 394 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 201 391 1.7E-31 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LT40_RS12060 7f030159524e3cba8e99e57320a4b8ee 394 PANTHER PTHR26402 194 203 9.2E-38 T 23-04-2016 LT40_RS12060 7f030159524e3cba8e99e57320a4b8ee 394 PANTHER PTHR26402 6 136 9.2E-38 T 23-04-2016 LT40_RS12060 7f030159524e3cba8e99e57320a4b8ee 394 SMART SM00331 174 391 3.4E-8 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LT40_RS12060 7f030159524e3cba8e99e57320a4b8ee 394 SUPERFAMILY SSF52172 5 147 1.57E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS12060 7f030159524e3cba8e99e57320a4b8ee 394 SMART SM00448 6 118 3.1E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20075 7744d4e9c107f79c9ed30680cd4b78a5 315 SUPERFAMILY SSF46955 20 112 2.52E-18 T 23-04-2016 IPR009061 Putative DNA-binding domain LT40_RS20075 7744d4e9c107f79c9ed30680cd4b78a5 315 Pfam PF13411 MerR HTH family regulatory protein 20 87 7.5E-16 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS20075 7744d4e9c107f79c9ed30680cd4b78a5 315 Gene3D G3DSA:1.10.1660.10 20 121 3.2E-19 T 23-04-2016 LT40_RS20075 7744d4e9c107f79c9ed30680cd4b78a5 315 PANTHER PTHR30204 12 247 2.1E-36 T 23-04-2016 LT40_RS20075 7744d4e9c107f79c9ed30680cd4b78a5 315 SMART SM00422 20 89 1.8E-21 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS20075 7744d4e9c107f79c9ed30680cd4b78a5 315 PANTHER PTHR30204:SF19 12 247 2.1E-36 T 23-04-2016 LT40_RS11665 8d8d5e0ef663eaa6afa30624a05e5e8c 345 Pfam PF00296 Luciferase-like monooxygenase 1 315 5.6E-57 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS11665 8d8d5e0ef663eaa6afa30624a05e5e8c 345 SUPERFAMILY SSF51679 1 345 2.09E-76 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS11665 8d8d5e0ef663eaa6afa30624a05e5e8c 345 Gene3D G3DSA:3.20.20.30 1 345 1.1E-83 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS11665 8d8d5e0ef663eaa6afa30624a05e5e8c 345 PANTHER PTHR30137 1 345 1.8E-43 T 23-04-2016 LT40_RS05820 2a1535e37838871f1aa1134808b753cd 258 Gene3D G3DSA:3.40.190.10 10 126 2.1E-38 T 23-04-2016 LT40_RS05820 2a1535e37838871f1aa1134808b753cd 258 SMART SM00079 25 242 0.0011 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LT40_RS05820 2a1535e37838871f1aa1134808b753cd 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LT40_RS05820 2a1535e37838871f1aa1134808b753cd 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 241 6.1E-53 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS05820 2a1535e37838871f1aa1134808b753cd 258 SMART SM00062 25 243 5.2E-48 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS05820 2a1535e37838871f1aa1134808b753cd 258 SUPERFAMILY SSF53850 5 241 2.17E-59 T 23-04-2016 LT40_RS05820 2a1535e37838871f1aa1134808b753cd 258 Gene3D G3DSA:3.40.190.10 127 205 2.3E-20 T 23-04-2016 LT40_RS05820 2a1535e37838871f1aa1134808b753cd 258 PANTHER PTHR18966 9 240 5.9E-34 T 23-04-2016 LT40_RS05820 2a1535e37838871f1aa1134808b753cd 258 PANTHER PTHR18966:SF152 9 240 5.9E-34 T 23-04-2016 LT40_RS08340 b1c4e1aa20bc4e7897a2c7eed9bf63d5 164 Gene3D G3DSA:3.50.100.10 62 152 3.8E-29 T 23-04-2016 LT40_RS08340 b1c4e1aa20bc4e7897a2c7eed9bf63d5 164 Gene3D G3DSA:3.10.20.10 2 61 1.7E-24 T 23-04-2016 LT40_RS08340 b1c4e1aa20bc4e7897a2c7eed9bf63d5 164 Pfam PF07566 Domain of Unknown Function (DUF1543) 15 64 6.1E-20 T 23-04-2016 IPR011440 Domain of unknown function DUF1543 LT40_RS08340 b1c4e1aa20bc4e7897a2c7eed9bf63d5 164 Pfam PF07566 Domain of Unknown Function (DUF1543) 92 137 7.7E-8 T 23-04-2016 IPR011440 Domain of unknown function DUF1543 LT40_RS00845 385b715d0f23d67e068348f6ea0fc422 154 PANTHER PTHR35603 2 153 2.6E-44 T 23-04-2016 LT40_RS00845 385b715d0f23d67e068348f6ea0fc422 154 PANTHER PTHR35603:SF1 2 153 2.6E-44 T 23-04-2016 LT40_RS00845 385b715d0f23d67e068348f6ea0fc422 154 Pfam PF05433 Glycine zipper 2TM domain 61 100 9.1E-7 T 23-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 LT40_RS05885 d395d5396acd0ed9faa2d4b80bd2e7ab 156 Gene3D G3DSA:1.10.10.10 11 154 1.2E-41 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05885 d395d5396acd0ed9faa2d4b80bd2e7ab 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 7.8E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS05885 d395d5396acd0ed9faa2d4b80bd2e7ab 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 7.8E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS05885 d395d5396acd0ed9faa2d4b80bd2e7ab 156 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 7.8E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS05885 d395d5396acd0ed9faa2d4b80bd2e7ab 156 PANTHER PTHR33164 13 154 1.7E-52 T 23-04-2016 LT40_RS05885 d395d5396acd0ed9faa2d4b80bd2e7ab 156 PANTHER PTHR33164:SF5 13 154 1.7E-52 T 23-04-2016 LT40_RS05885 d395d5396acd0ed9faa2d4b80bd2e7ab 156 Pfam PF01047 MarR family 47 105 1.0E-15 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS05885 d395d5396acd0ed9faa2d4b80bd2e7ab 156 SMART SM00347 40 143 2.3E-18 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS05885 d395d5396acd0ed9faa2d4b80bd2e7ab 156 SUPERFAMILY SSF46785 13 153 1.28E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07105 777911b32813a611c59378dfcf931019 319 Pfam PF03466 LysR substrate binding domain 100 314 1.0E-17 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS07105 777911b32813a611c59378dfcf931019 319 SUPERFAMILY SSF53850 102 318 2.53E-21 T 23-04-2016 LT40_RS07105 777911b32813a611c59378dfcf931019 319 Gene3D G3DSA:3.40.190.10 105 190 5.4E-14 T 23-04-2016 LT40_RS07105 777911b32813a611c59378dfcf931019 319 PANTHER PTHR30537 9 318 1.4E-55 T 23-04-2016 LT40_RS07105 777911b32813a611c59378dfcf931019 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 75 7.0E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07105 777911b32813a611c59378dfcf931019 319 Gene3D G3DSA:1.10.10.10 16 99 4.7E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07105 777911b32813a611c59378dfcf931019 319 Gene3D G3DSA:3.40.190.10 191 281 3.2E-7 T 23-04-2016 LT40_RS07105 777911b32813a611c59378dfcf931019 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 6.4E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07105 777911b32813a611c59378dfcf931019 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 6.4E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07105 777911b32813a611c59378dfcf931019 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 6.4E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07105 777911b32813a611c59378dfcf931019 319 SUPERFAMILY SSF46785 12 96 4.15E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 Gene3D G3DSA:3.40.50.2300 3 126 3.0E-34 T 23-04-2016 LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 SMART SM00448 3 114 7.3E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 Pfam PF00072 Response regulator receiver domain 5 114 2.5E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 Pfam PF00158 Sigma-54 interaction domain 145 310 2.5E-62 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 Gene3D G3DSA:3.40.50.300 142 316 6.7E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 Gene3D G3DSA:1.10.10.60 367 435 8.9E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 SUPERFAMILY SSF52172 4 187 2.85E-40 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 Pfam PF02954 Bacterial regulatory protein, Fis family 394 433 3.4E-8 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 PANTHER PTHR32071 1 442 3.5E-236 T 23-04-2016 LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 SMART SM00382 164 307 2.0E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 Gene3D G3DSA:1.10.8.60 317 366 1.5E-19 T 23-04-2016 LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 23-04-2016 IPR025944 Sigma-54 interaction domain, conserved site LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 SUPERFAMILY SSF46689 355 435 7.62E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 PANTHER PTHR32071:SF40 1 442 3.5E-236 T 23-04-2016 LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 SUPERFAMILY SSF52540 145 373 3.66E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04430 8cf3a71ae861c42bee9e44d46ad5ec04 442 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 LT40_RS09500 ec18dc40c519e713c344eff22a047a2b 219 Pfam PF08239 Bacterial SH3 domain 51 99 2.2E-8 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type LT40_RS09500 ec18dc40c519e713c344eff22a047a2b 219 PIRSF PIRSF006158 13 219 1.1E-75 T 23-04-2016 IPR016476 SH3 domain protein LT40_RS09500 ec18dc40c519e713c344eff22a047a2b 219 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 43 218 3.8E-42 T 23-04-2016 IPR016476 SH3 domain protein LT40_RS09500 ec18dc40c519e713c344eff22a047a2b 219 SMART SM00287 39 102 5.9E-7 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type LT40_RS13440 0cf0b9f333e63f55c3f1495b165e49cb 593 Pfam PF11412 Disulphide bond corrector protein DsbC 39 153 6.9E-33 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LT40_RS13440 0cf0b9f333e63f55c3f1495b165e49cb 593 Pfam PF13899 Thioredoxin-like 482 564 2.6E-12 T 23-04-2016 LT40_RS13440 0cf0b9f333e63f55c3f1495b165e49cb 593 Gene3D G3DSA:3.40.30.10 478 585 6.4E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS13440 0cf0b9f333e63f55c3f1495b165e49cb 593 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 181 384 7.8E-13 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 LT40_RS13440 0cf0b9f333e63f55c3f1495b165e49cb 593 SUPERFAMILY SSF74863 37 153 3.53E-35 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LT40_RS13440 0cf0b9f333e63f55c3f1495b165e49cb 593 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 591 34.046 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 LT40_RS13440 0cf0b9f333e63f55c3f1495b165e49cb 593 PANTHER PTHR32234 7 592 6.1E-168 T 23-04-2016 LT40_RS13440 0cf0b9f333e63f55c3f1495b165e49cb 593 PANTHER PTHR32234:SF0 7 592 6.1E-168 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 LT40_RS13440 0cf0b9f333e63f55c3f1495b165e49cb 593 SUPERFAMILY SSF52833 473 587 5.7E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS13440 0cf0b9f333e63f55c3f1495b165e49cb 593 Gene3D G3DSA:2.60.40.1250 35 154 8.6E-40 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 16 405 2.5E-74 T 23-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 SUPERFAMILY SSF50993 15 413 7.06E-75 T 23-04-2016 LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 474 498 8.5E-52 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 608 630 8.5E-52 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 532 552 8.5E-52 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 590 605 8.5E-52 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 502 521 8.5E-52 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 448 466 8.5E-52 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 PANTHER PTHR11757:SF3 17 684 5.8E-289 T 23-04-2016 LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 Gene3D G3DSA:3.40.50.1820 421 659 3.2E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 Gene3D G3DSA:2.130.10.120 66 409 1.6E-86 T 23-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 SUPERFAMILY SSF53474 418 657 2.81E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 Pfam PF00326 Prolyl oligopeptidase family 464 679 1.8E-69 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 LT40_RS20630 469e76aaa62f63e587d2523835a7bed0 684 PANTHER PTHR11757 17 684 5.8E-289 T 23-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 LT40_RS12390 312bcd77734c88e74a72920c2cc683ce 301 SUPERFAMILY SSF48576 20 280 6.12E-61 T 23-04-2016 IPR008949 Isoprenoid synthase domain LT40_RS12390 312bcd77734c88e74a72920c2cc683ce 301 PANTHER PTHR12001:SF23 13 273 6.9E-50 T 23-04-2016 LT40_RS12390 312bcd77734c88e74a72920c2cc683ce 301 Pfam PF00348 Polyprenyl synthetase 44 275 2.8E-41 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LT40_RS12390 312bcd77734c88e74a72920c2cc683ce 301 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 107 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LT40_RS12390 312bcd77734c88e74a72920c2cc683ce 301 PANTHER PTHR12001 13 273 6.9E-50 T 23-04-2016 IPR017446 Polyprenyl synthetase-related LT40_RS12390 312bcd77734c88e74a72920c2cc683ce 301 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 222 234 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 LT40_RS12390 312bcd77734c88e74a72920c2cc683ce 301 Gene3D G3DSA:1.10.600.10 12 274 3.3E-61 T 23-04-2016 IPR008949 Isoprenoid synthase domain LT40_RS11865 93e6468a549d035335697f115e7f0ac9 443 Gene3D G3DSA:3.20.20.30 349 436 2.2E-129 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS11865 93e6468a549d035335697f115e7f0ac9 443 Gene3D G3DSA:3.20.20.30 1 305 2.2E-129 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS11865 93e6468a549d035335697f115e7f0ac9 443 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 14 429 2.9E-151 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LT40_RS11865 93e6468a549d035335697f115e7f0ac9 443 PIRSF PIRSF000337 3 443 4.9E-155 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LT40_RS11865 93e6468a549d035335697f115e7f0ac9 443 PANTHER PTHR30011 1 440 4.8E-153 T 23-04-2016 LT40_RS11865 93e6468a549d035335697f115e7f0ac9 443 Pfam PF00296 Luciferase-like monooxygenase 23 385 8.3E-55 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS11865 93e6468a549d035335697f115e7f0ac9 443 SUPERFAMILY SSF51679 5 435 2.88E-122 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS11865 93e6468a549d035335697f115e7f0ac9 443 PANTHER PTHR30011:SF18 1 440 4.8E-153 T 23-04-2016 LT40_RS00305 d43adb9a210b385f7a802386fe0cec42 74 Pfam PF04325 Protein of unknown function (DUF465) 30 72 1.4E-4 T 23-04-2016 IPR007420 Protein of unknown function DUF465 LT40_RS05990 2da613ea55703076e4667beb7380bebc 358 SUPERFAMILY SSF53300 87 267 1.78E-38 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS05990 2da613ea55703076e4667beb7380bebc 358 SMART SM00327 89 289 1.3E-23 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS05990 2da613ea55703076e4667beb7380bebc 358 PANTHER PTHR22550 1 324 4.8E-137 T 23-04-2016 LT40_RS05990 2da613ea55703076e4667beb7380bebc 358 PANTHER PTHR22550:SF12 1 324 4.8E-137 T 23-04-2016 LT40_RS05990 2da613ea55703076e4667beb7380bebc 358 Pfam PF00092 von Willebrand factor type A domain 91 280 1.5E-28 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS05990 2da613ea55703076e4667beb7380bebc 358 Gene3D G3DSA:3.40.50.410 89 280 3.8E-28 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS05935 07a08068a8a7f8ce3b01c4b3d7e8b250 171 Pfam PF07977 FabA-like domain 28 157 4.2E-53 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LT40_RS05935 07a08068a8a7f8ce3b01c4b3d7e8b250 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 2.0E-93 T 23-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LT40_RS05935 07a08068a8a7f8ce3b01c4b3d7e8b250 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 50.573 T 23-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LT40_RS05935 07a08068a8a7f8ce3b01c4b3d7e8b250 171 Gene3D G3DSA:3.10.129.10 2 167 1.7E-61 T 23-04-2016 IPR029069 HotDog domain LT40_RS05935 07a08068a8a7f8ce3b01c4b3d7e8b250 171 SUPERFAMILY SSF54637 2 169 2.24E-57 T 23-04-2016 IPR029069 HotDog domain LT40_RS04705 d0d4ed3ee9f7b742e8a1bac076224299 1478 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 31 52 9.3E-34 T 23-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LT40_RS04705 d0d4ed3ee9f7b742e8a1bac076224299 1478 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 130 148 9.3E-34 T 23-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LT40_RS04705 d0d4ed3ee9f7b742e8a1bac076224299 1478 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 193 211 9.3E-34 T 23-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LT40_RS04705 d0d4ed3ee9f7b742e8a1bac076224299 1478 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 265 284 9.3E-34 T 23-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LT40_RS04705 d0d4ed3ee9f7b742e8a1bac076224299 1478 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 90 106 9.3E-34 T 23-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LT40_RS04705 d0d4ed3ee9f7b742e8a1bac076224299 1478 PRINTS PR01341 Salmonella virulence plasmid 65kDa B protein signature 298 316 9.3E-34 T 23-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LT40_RS04705 d0d4ed3ee9f7b742e8a1bac076224299 1478 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 638 813 1.8E-34 T 23-04-2016 IPR022045 Insecticide toxin TcdB middle/N-terminal LT40_RS04705 d0d4ed3ee9f7b742e8a1bac076224299 1478 SUPERFAMILY SSF69318 424 706 1.12E-13 T 23-04-2016 LT40_RS04705 d0d4ed3ee9f7b742e8a1bac076224299 1478 Pfam PF12255 Insecticide toxin TcdB middle/C-terminal region 861 1008 3.0E-48 T 23-04-2016 IPR022044 Insecticide toxin TcdB middle/C-terminal LT40_RS04705 d0d4ed3ee9f7b742e8a1bac076224299 1478 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 34 317 1.3E-87 T 23-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 LT40_RS04705 d0d4ed3ee9f7b742e8a1bac076224299 1478 Gene3D G3DSA:2.130.10.130 443 712 1.4E-5 T 23-04-2016 LT40_RS01520 773ec4497e618c6ec477d712f7a24c1d 304 SUPERFAMILY SSF103481 53 142 1.57E-7 T 23-04-2016 LT40_RS01520 773ec4497e618c6ec477d712f7a24c1d 304 PANTHER PTHR12715 12 299 1.0E-123 T 23-04-2016 LT40_RS01520 773ec4497e618c6ec477d712f7a24c1d 304 PANTHER PTHR12715:SF9 12 299 1.0E-123 T 23-04-2016 LT40_RS01520 773ec4497e618c6ec477d712f7a24c1d 304 SUPERFAMILY SSF103481 192 295 3.27E-8 T 23-04-2016 LT40_RS01520 773ec4497e618c6ec477d712f7a24c1d 304 Pfam PF00892 EamA-like transporter family 16 142 1.1E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS01520 773ec4497e618c6ec477d712f7a24c1d 304 Pfam PF00892 EamA-like transporter family 158 290 4.1E-14 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS14260 dd49fd8439b5aa82fc4feb049b5f05c8 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 3.9E-33 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS14260 dd49fd8439b5aa82fc4feb049b5f05c8 72 PRINTS PR01249 Ribosomal protein L31 signature 46 64 1.3E-20 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS14260 dd49fd8439b5aa82fc4feb049b5f05c8 72 PRINTS PR01249 Ribosomal protein L31 signature 31 46 1.3E-20 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS14260 dd49fd8439b5aa82fc4feb049b5f05c8 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.3E-20 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS14260 dd49fd8439b5aa82fc4feb049b5f05c8 72 SUPERFAMILY SSF143800 1 67 1.37E-26 T 23-04-2016 LT40_RS14260 dd49fd8439b5aa82fc4feb049b5f05c8 72 Pfam PF01197 Ribosomal protein L31 1 65 2.7E-29 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS14260 dd49fd8439b5aa82fc4feb049b5f05c8 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS14260 dd49fd8439b5aa82fc4feb049b5f05c8 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 30.056 T 23-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS14260 dd49fd8439b5aa82fc4feb049b5f05c8 72 PANTHER PTHR33280 1 67 5.7E-33 T 23-04-2016 LT40_RS06220 de191615d5045de987d5227dbeb9cd02 182 PANTHER PTHR30529:SF3 2 182 4.2E-66 T 23-04-2016 LT40_RS06220 de191615d5045de987d5227dbeb9cd02 182 SUPERFAMILY SSF81342 4 179 1.1E-26 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 LT40_RS06220 de191615d5045de987d5227dbeb9cd02 182 PANTHER PTHR30529 2 182 4.2E-66 T 23-04-2016 LT40_RS06220 de191615d5045de987d5227dbeb9cd02 182 Pfam PF01292 Prokaryotic cytochrome b561 9 179 2.8E-15 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LT40_RS14120 6f5d948108d4f76b20d55793696b7fc4 134 PANTHER PTHR33653 1 130 2.2E-25 T 23-04-2016 LT40_RS14120 6f5d948108d4f76b20d55793696b7fc4 134 Gene3D G3DSA:3.40.50.1010 1 130 1.2E-25 T 23-04-2016 IPR029060 PIN domain-like LT40_RS14120 6f5d948108d4f76b20d55793696b7fc4 134 Pfam PF01850 PIN domain 5 123 1.4E-13 T 23-04-2016 IPR002716 PIN domain LT40_RS14120 6f5d948108d4f76b20d55793696b7fc4 134 PANTHER PTHR33653:SF2 1 130 2.2E-25 T 23-04-2016 LT40_RS14120 6f5d948108d4f76b20d55793696b7fc4 134 SUPERFAMILY SSF88723 1 132 8.69E-30 T 23-04-2016 IPR029060 PIN domain-like LT40_RS02145 a4b1dc28886d6c7904b4644d7e2204b5 610 PANTHER PTHR30290 1 360 2.2E-217 T 23-04-2016 LT40_RS02145 a4b1dc28886d6c7904b4644d7e2204b5 610 PANTHER PTHR30290 385 605 2.2E-217 T 23-04-2016 LT40_RS02145 a4b1dc28886d6c7904b4644d7e2204b5 610 PANTHER PTHR30290:SF2 1 360 2.2E-217 T 23-04-2016 LT40_RS02145 a4b1dc28886d6c7904b4644d7e2204b5 610 PANTHER PTHR30290:SF2 385 605 2.2E-217 T 23-04-2016 LT40_RS02145 a4b1dc28886d6c7904b4644d7e2204b5 610 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 111 510 4.3E-77 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS02145 a4b1dc28886d6c7904b4644d7e2204b5 610 SUPERFAMILY SSF53850 53 596 2.17E-124 T 23-04-2016 LT40_RS02145 a4b1dc28886d6c7904b4644d7e2204b5 610 Gene3D G3DSA:3.90.76.10 68 219 6.3E-34 T 23-04-2016 LT40_RS02145 a4b1dc28886d6c7904b4644d7e2204b5 610 PIRSF PIRSF002741 6 598 3.3E-108 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS02145 a4b1dc28886d6c7904b4644d7e2204b5 610 Gene3D G3DSA:3.10.105.10 310 564 2.5E-49 T 23-04-2016 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 PANTHER PTHR32089 242 634 5.1E-125 T 23-04-2016 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 SUPERFAMILY SSF58104 325 632 8.89E-76 T 23-04-2016 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 SMART SM01358 34 283 5.8E-37 T 23-04-2016 IPR032255 Helical bimodular sensor domain LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 PANTHER PTHR32089:SF64 242 634 5.1E-125 T 23-04-2016 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 SMART SM00283 372 633 1.9E-84 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 Gene3D G3DSA:1.10.287.950 387 605 5.4E-59 T 23-04-2016 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 Pfam PF16591 Helical bimodular sensor domain 34 281 4.1E-41 T 23-04-2016 IPR032255 Helical bimodular sensor domain LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 632 1.3E-49 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 Pfam PF00672 HAMP domain 286 354 2.7E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 SMART SM00304 364 410 7.2 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 SMART SM00304 305 357 8.4E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 470 497 8.9E-22 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 528 8.9E-22 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS15405 0307636f2b072037540d7fe02289e2cf 634 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 8.9E-22 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS03485 01d45234bff55fed9691e43ad37c953f 165 PANTHER PTHR33221 2 152 2.5E-72 T 23-04-2016 LT40_RS03485 01d45234bff55fed9691e43ad37c953f 165 Gene3D G3DSA:1.10.10.10 1 134 1.1E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03485 01d45234bff55fed9691e43ad37c953f 165 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 2.5E-47 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type LT40_RS03485 01d45234bff55fed9691e43ad37c953f 165 PANTHER PTHR33221:SF1 2 152 2.5E-72 T 23-04-2016 LT40_RS03485 01d45234bff55fed9691e43ad37c953f 165 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.9E-67 T 23-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 LT40_RS03485 01d45234bff55fed9691e43ad37c953f 165 SUPERFAMILY SSF46785 2 132 5.33E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03485 01d45234bff55fed9691e43ad37c953f 165 Pfam PF02082 Transcriptional regulator 1 83 4.6E-28 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type LT40_RS20800 df46f0afc6a0591f73440f67c888fd79 327 SUPERFAMILY SSF51735 95 291 1.42E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS20800 df46f0afc6a0591f73440f67c888fd79 327 Gene3D G3DSA:3.40.50.720 27 111 2.6E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS20800 df46f0afc6a0591f73440f67c888fd79 327 PANTHER PTHR10996 70 324 2.0E-48 T 23-04-2016 LT40_RS20800 df46f0afc6a0591f73440f67c888fd79 327 Gene3D G3DSA:3.40.50.720 112 291 5.3E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS20800 df46f0afc6a0591f73440f67c888fd79 327 SUPERFAMILY SSF52283 21 110 8.5E-6 T 23-04-2016 LT40_RS20800 df46f0afc6a0591f73440f67c888fd79 327 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 289 4.0E-43 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 PANTHER PTHR33175:SF5 1 95 3.7E-49 T 23-04-2016 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 94 5.2E-52 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 Pfam PF00216 Bacterial DNA-binding protein 1 91 1.0E-28 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 SMART SM00411 1 91 2.1E-43 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 PANTHER PTHR33175 1 95 3.7E-49 T 23-04-2016 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.7E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.7E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.7E-18 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 SUPERFAMILY SSF47729 1 92 2.21E-30 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.061 T 23-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 LT40_RS06185 a70ea3b3a0a0c05f7dce4d439ffdd1ae 97 Gene3D G3DSA:4.10.520.10 1 92 1.3E-33 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LT40_RS15040 7c0c57a1a75259f64bdd20f9bba8f0ff 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 8.4E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15040 7c0c57a1a75259f64bdd20f9bba8f0ff 304 Pfam PF03466 LysR substrate binding domain 93 295 4.8E-44 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS15040 7c0c57a1a75259f64bdd20f9bba8f0ff 304 SUPERFAMILY SSF53850 93 299 1.03E-43 T 23-04-2016 LT40_RS15040 7c0c57a1a75259f64bdd20f9bba8f0ff 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.6E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15040 7c0c57a1a75259f64bdd20f9bba8f0ff 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.6E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15040 7c0c57a1a75259f64bdd20f9bba8f0ff 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.6E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS15040 7c0c57a1a75259f64bdd20f9bba8f0ff 304 SUPERFAMILY SSF46785 6 86 4.09E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15040 7c0c57a1a75259f64bdd20f9bba8f0ff 304 Gene3D G3DSA:3.40.190.10 181 263 7.1E-4 T 23-04-2016 LT40_RS15040 7c0c57a1a75259f64bdd20f9bba8f0ff 304 Gene3D G3DSA:1.10.10.10 6 85 6.0E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15040 7c0c57a1a75259f64bdd20f9bba8f0ff 304 PANTHER PTHR30537 1 291 5.1E-96 T 23-04-2016 LT40_RS15040 7c0c57a1a75259f64bdd20f9bba8f0ff 304 Gene3D G3DSA:3.40.190.10 94 180 4.2E-23 T 23-04-2016 LT40_RS04550 6e36614999624da2d79dec5b4fed0b87 345 PANTHER PTHR38457 1 343 3.0E-76 T 23-04-2016 LT40_RS04550 6e36614999624da2d79dec5b4fed0b87 345 PIRSF PIRSF038991 1 344 2.0E-71 T 23-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 LT40_RS04550 6e36614999624da2d79dec5b4fed0b87 345 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 182 337 7.6E-41 T 23-04-2016 IPR017516 AbrB duplication LT40_RS04550 6e36614999624da2d79dec5b4fed0b87 345 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 9 164 1.1E-35 T 23-04-2016 IPR017516 AbrB duplication LT40_RS04550 6e36614999624da2d79dec5b4fed0b87 345 PANTHER PTHR38457:SF1 1 343 3.0E-76 T 23-04-2016 LT40_RS04550 6e36614999624da2d79dec5b4fed0b87 345 Pfam PF05145 Putative ammonia monooxygenase 32 338 1.7E-87 T 23-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 9.1E-6 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 9.1E-6 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 SUPERFAMILY SSF100950 76 233 7.85E-31 T 23-04-2016 LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 SUPERFAMILY SSF46785 7 64 3.03E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 PANTHER PTHR30363:SF15 3 255 1.2E-144 T 23-04-2016 LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 Gene3D G3DSA:1.10.10.10 5 54 6.0E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 Pfam PF00455 DeoR C terminal sensor domain 77 231 1.5E-42 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 4.2E-16 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 PANTHER PTHR30363 3 255 1.2E-144 T 23-04-2016 LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 Gene3D G3DSA:3.40.50.1360 75 221 1.5E-15 T 23-04-2016 LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 SMART SM01134 72 233 3.8E-56 T 23-04-2016 LT40_RS16140 c6cedf86a73f887587de8056cea809c2 255 SMART SM00420 9 61 4.1E-15 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LT40_RS20995 7e2d68c39afcdad9fed0c4f35af5be24 150 Gene3D G3DSA:3.40.50.150 53 141 8.7E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS20995 7e2d68c39afcdad9fed0c4f35af5be24 150 SUPERFAMILY SSF53335 54 147 3.08E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS20995 7e2d68c39afcdad9fed0c4f35af5be24 150 PANTHER PTHR10108 56 139 1.5E-13 T 23-04-2016 LT40_RS20995 7e2d68c39afcdad9fed0c4f35af5be24 150 Pfam PF13649 Methyltransferase domain 104 144 2.5E-7 T 23-04-2016 LT40_RS20995 7e2d68c39afcdad9fed0c4f35af5be24 150 PANTHER PTHR10108:SF919 56 139 1.5E-13 T 23-04-2016 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 384 403 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 475 482 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 PANTHER PTHR32248:SF4 1 497 5.4E-175 T 23-04-2016 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 494 1.8E-154 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 PRINTS PR00045 Sigma-54 factor signature 412 423 4.9E-32 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 PRINTS PR00045 Sigma-54 factor signature 206 223 4.9E-32 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 PRINTS PR00045 Sigma-54 factor signature 470 488 4.9E-32 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 PRINTS PR00045 Sigma-54 factor signature 396 408 4.9E-32 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 Pfam PF04552 Sigma-54, DNA binding domain 337 495 8.2E-72 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 PANTHER PTHR32248 1 497 5.4E-175 T 23-04-2016 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 Pfam PF04963 Sigma-54 factor, core binding domain 131 323 1.1E-63 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 PIRSF PIRSF000774 1 497 2.5E-155 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LT40_RS03790 19dca1b432c0cbdbf684b078852d365a 497 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 4.5E-17 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 LT40_RS01305 8935cec7479fa2223610869858876119 92 Pfam PF12021 Protein of unknown function (DUF3509) 6 85 3.4E-31 T 23-04-2016 IPR021898 Protein of unknown function DUF3509 LT40_RS04165 57bdef8477546aeefd2fc37ff1878e4f 227 Gene3D G3DSA:1.10.10.10 126 221 1.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04165 57bdef8477546aeefd2fc37ff1878e4f 227 SUPERFAMILY SSF52172 1 177 1.99E-43 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS04165 57bdef8477546aeefd2fc37ff1878e4f 227 SMART SM00862 146 220 2.3E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS04165 57bdef8477546aeefd2fc37ff1878e4f 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 220 1.4E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS04165 57bdef8477546aeefd2fc37ff1878e4f 227 Pfam PF00072 Response regulator receiver domain 3 114 5.4E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS04165 57bdef8477546aeefd2fc37ff1878e4f 227 PANTHER PTHR26402:SF552 1 222 5.6E-118 T 23-04-2016 LT40_RS04165 57bdef8477546aeefd2fc37ff1878e4f 227 SMART SM00448 1 113 4.6E-46 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS04165 57bdef8477546aeefd2fc37ff1878e4f 227 PANTHER PTHR26402 1 222 5.6E-118 T 23-04-2016 LT40_RS04165 57bdef8477546aeefd2fc37ff1878e4f 227 Gene3D G3DSA:3.40.50.2300 1 123 5.4E-42 T 23-04-2016 LT40_RS15280 bd03a59863c96abb52fa89af4f4adf52 225 SUPERFAMILY SSF75445 131 202 1.31E-24 T 23-04-2016 LT40_RS15280 bd03a59863c96abb52fa89af4f4adf52 225 PANTHER PTHR11934 1 223 8.7E-134 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LT40_RS15280 bd03a59863c96abb52fa89af4f4adf52 225 Gene3D G3DSA:3.40.50.1360 1 140 1.6E-55 T 23-04-2016 LT40_RS15280 bd03a59863c96abb52fa89af4f4adf52 225 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 221 32.975 T 23-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LT40_RS15280 bd03a59863c96abb52fa89af4f4adf52 225 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 219 8.3E-63 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LT40_RS15280 bd03a59863c96abb52fa89af4f4adf52 225 Gene3D G3DSA:3.30.70.260 141 200 1.3E-30 T 23-04-2016 LT40_RS15280 bd03a59863c96abb52fa89af4f4adf52 225 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 217 9.4E-58 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LT40_RS15280 bd03a59863c96abb52fa89af4f4adf52 225 SUPERFAMILY SSF100950 1 150 9.3E-43 T 23-04-2016 LT40_RS15280 bd03a59863c96abb52fa89af4f4adf52 225 PANTHER PTHR11934:SF11 1 223 8.7E-134 T 23-04-2016 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 5.7E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 PRINTS PR00173 Glutamate-aspartate symporter signature 362 382 5.7E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 5.7E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 5.7E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 PRINTS PR00173 Glutamate-aspartate symporter signature 151 173 5.7E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 PRINTS PR00173 Glutamate-aspartate symporter signature 226 245 5.7E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 PRINTS PR00173 Glutamate-aspartate symporter signature 199 218 5.7E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 PANTHER PTHR11958:SF49 5 412 3.8E-167 T 23-04-2016 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 Pfam PF00375 Sodium:dicarboxylate symporter family 13 408 8.7E-107 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 PANTHER PTHR11958 5 412 3.8E-167 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 SUPERFAMILY SSF118215 13 408 6.8E-109 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS07975 c544e6a4a484d57021b54f643154be77 433 Gene3D G3DSA:1.10.3860.10 7 412 9.2E-107 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS09055 3ccea270a386f9185a593e8122e68387 298 PANTHER PTHR10491:SF4 2 298 1.2E-91 T 23-04-2016 LT40_RS09055 3ccea270a386f9185a593e8122e68387 298 Gene3D G3DSA:3.40.50.720 2 174 2.2E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09055 3ccea270a386f9185a593e8122e68387 298 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 294 8.7E-100 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family LT40_RS09055 3ccea270a386f9185a593e8122e68387 298 Gene3D G3DSA:3.90.25.10 175 186 2.0E-30 T 23-04-2016 LT40_RS09055 3ccea270a386f9185a593e8122e68387 298 Gene3D G3DSA:3.90.25.10 223 285 2.0E-30 T 23-04-2016 LT40_RS09055 3ccea270a386f9185a593e8122e68387 298 PANTHER PTHR10491 2 298 1.2E-91 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family LT40_RS09055 3ccea270a386f9185a593e8122e68387 298 SUPERFAMILY SSF51735 2 295 1.44E-100 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09055 3ccea270a386f9185a593e8122e68387 298 Pfam PF04321 RmlD substrate binding domain 2 295 1.6E-107 T 23-04-2016 IPR029903 RmlD-like substrate binding domain LT40_RS13770 c9e3cb301df7bf3c41cd3952b0ddd090 338 PANTHER PTHR30006 20 329 7.3E-85 T 23-04-2016 LT40_RS13770 c9e3cb301df7bf3c41cd3952b0ddd090 338 PIRSF PIRSF002825 8 338 2.3E-76 T 23-04-2016 IPR026045 Ferric binding protein LT40_RS13770 c9e3cb301df7bf3c41cd3952b0ddd090 338 Gene3D G3DSA:3.40.190.10 134 270 6.7E-42 T 23-04-2016 LT40_RS13770 c9e3cb301df7bf3c41cd3952b0ddd090 338 PANTHER PTHR30006:SF6 20 329 7.3E-85 T 23-04-2016 LT40_RS13770 c9e3cb301df7bf3c41cd3952b0ddd090 338 Pfam PF13343 Bacterial extracellular solute-binding protein 84 301 1.3E-22 T 23-04-2016 LT40_RS13770 c9e3cb301df7bf3c41cd3952b0ddd090 338 SUPERFAMILY SSF53850 30 325 7.11E-67 T 23-04-2016 LT40_RS13770 c9e3cb301df7bf3c41cd3952b0ddd090 338 Gene3D G3DSA:3.40.190.10 271 316 4.2E-31 T 23-04-2016 LT40_RS13770 c9e3cb301df7bf3c41cd3952b0ddd090 338 Gene3D G3DSA:3.40.190.10 10 129 4.2E-31 T 23-04-2016 LT40_RS03715 efc9ef33156823f6a83601d5948711a1 195 PIRSF PIRSF006305 1 193 1.5E-47 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 LT40_RS03715 efc9ef33156823f6a83601d5948711a1 195 Gene3D G3DSA:3.90.950.10 3 189 1.3E-64 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LT40_RS03715 efc9ef33156823f6a83601d5948711a1 195 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 31.429 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 LT40_RS03715 efc9ef33156823f6a83601d5948711a1 195 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 185 2.5E-49 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 LT40_RS03715 efc9ef33156823f6a83601d5948711a1 195 SUPERFAMILY SSF52972 2 185 3.27E-56 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like LT40_RS03715 efc9ef33156823f6a83601d5948711a1 195 Pfam PF02545 Maf-like protein 4 186 1.2E-52 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 LT40_RS03715 efc9ef33156823f6a83601d5948711a1 195 PANTHER PTHR11746 125 189 4.2E-13 T 23-04-2016 LT40_RS00780 6205e6d1887e918ffffd55a955d75ed2 161 ProDom PD010978 LATE EMBRYOGENESIS ABUNDANT DESICCATION SIMILAR PROTECTANT PROTEINS RELATED EMBRYOGENESIS-ABUNDANT EMBRYOGENESIS-LIKE 28 159 0.002 T 23-04-2016 LT40_RS00780 6205e6d1887e918ffffd55a955d75ed2 161 SUPERFAMILY SSF117070 12 155 1.31E-28 T 23-04-2016 LT40_RS00780 6205e6d1887e918ffffd55a955d75ed2 161 SMART SM00769 35 154 2.0E-20 T 23-04-2016 IPR013990 Water stress and hypersensitive response domain GO:0009269 LT40_RS00780 6205e6d1887e918ffffd55a955d75ed2 161 Gene3D G3DSA:2.60.40.10 33 142 2.6E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold LT40_RS00780 6205e6d1887e918ffffd55a955d75ed2 161 Pfam PF03168 Late embryogenesis abundant protein 56 150 1.2E-15 T 23-04-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PANTHER PTHR10422 33 614 0.0 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 8.2E-138 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 23-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 Gene3D G3DSA:1.20.210.10 38 589 7.8E-191 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 SUPERFAMILY SSF81442 43 559 4.58E-179 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PANTHER PTHR10422:SF26 33 614 0.0 T 23-04-2016 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS03320 3528cb7199ac3cd4fe36c86af95b6ba5 671 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 4.3E-97 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 LT40_RS13745 02bdae3ab8db853248cb8e230e518d1c 141 Pfam PF01250 Ribosomal protein S6 3 91 1.5E-25 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS13745 02bdae3ab8db853248cb8e230e518d1c 141 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 7.3E-33 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS13745 02bdae3ab8db853248cb8e230e518d1c 141 PANTHER PTHR21011 1 134 7.0E-38 T 23-04-2016 LT40_RS13745 02bdae3ab8db853248cb8e230e518d1c 141 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.846 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS13745 02bdae3ab8db853248cb8e230e518d1c 141 PANTHER PTHR21011:SF1 1 134 7.0E-38 T 23-04-2016 LT40_RS13745 02bdae3ab8db853248cb8e230e518d1c 141 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 23-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS13745 02bdae3ab8db853248cb8e230e518d1c 141 SUPERFAMILY SSF54995 1 102 7.59E-36 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 LT40_RS13745 02bdae3ab8db853248cb8e230e518d1c 141 Gene3D G3DSA:3.30.70.60 1 103 9.5E-40 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 Gene3D G3DSA:3.40.50.720 267 555 1.8E-102 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 SMART SM00919 269 524 5.9E-123 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 PIRSF PIRSF000106 1 556 8.8E-216 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 Gene3D G3DSA:3.40.50.10380 15 266 2.7E-110 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 PANTHER PTHR23406:SF25 1 555 0.0 T 23-04-2016 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 Pfam PF03949 Malic enzyme, NAD binding domain 269 521 4.7E-94 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 PRINTS PR00072 Malic enzyme signature 296 312 8.4E-70 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 PRINTS PR00072 Malic enzyme signature 240 258 8.4E-70 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 PRINTS PR00072 Malic enzyme signature 85 109 8.4E-70 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 PRINTS PR00072 Malic enzyme signature 145 174 8.4E-70 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 PRINTS PR00072 Malic enzyme signature 181 203 8.4E-70 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 PRINTS PR00072 Malic enzyme signature 265 281 8.4E-70 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 PRINTS PR00072 Malic enzyme signature 406 422 8.4E-70 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 SMART SM01274 79 259 3.4E-94 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 SUPERFAMILY SSF53223 5 268 2.23E-102 T 23-04-2016 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 PANTHER PTHR23406 1 555 0.0 T 23-04-2016 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 SUPERFAMILY SSF51735 269 554 3.1E-89 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 ProSitePatterns PS00331 Malic enzymes signature. 265 281 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 LT40_RS09945 2b88a5747c9008a6d88ef43998e7fad7 558 Pfam PF00390 Malic enzyme, N-terminal domain 79 259 1.6E-72 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 Gene3D G3DSA:1.10.1060.10 495 675 1.1E-14 T 23-04-2016 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 SUPERFAMILY SSF55103 243 519 9.16E-46 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 Gene3D G3DSA:3.30.43.10 2 92 6.6E-22 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 Pfam PF13183 4Fe-4S dicluster domain 555 658 1.3E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 SUPERFAMILY SSF56176 14 175 1.92E-48 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 SUPERFAMILY SSF56176 232 264 1.92E-48 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 Pfam PF02913 FAD linked oxidases, C-terminal domain 264 517 4.7E-53 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 Pfam PF01565 FAD binding domain 35 173 6.9E-36 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 PANTHER PTHR11748:SF35 231 567 2.3E-134 T 23-04-2016 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 PANTHER PTHR11748 231 567 2.3E-134 T 23-04-2016 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 PANTHER PTHR11748 1 179 2.3E-134 T 23-04-2016 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 PANTHER PTHR11748:SF35 1 179 2.3E-134 T 23-04-2016 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 644 655 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 SUPERFAMILY SSF46548 549 662 1.92E-7 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 LT40_RS06275 d65e96faa63bada44ece9f7ef1df917f 992 Gene3D G3DSA:3.30.465.10 93 264 2.7E-37 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 Pfam PF02785 Biotin carboxylase C-terminal domain 334 443 1.2E-36 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 PANTHER PTHR18866 1 579 1.1E-252 T 23-04-2016 LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 SUPERFAMILY SSF52440 1 112 2.01E-45 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 SUPERFAMILY SSF51246 328 445 4.5E-38 T 23-04-2016 IPR011054 Rudiment single hybrid motif LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 Gene3D G3DSA:2.40.50.100 507 576 8.3E-16 T 23-04-2016 LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 2.1E-78 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 SUPERFAMILY SSF51230 503 575 3.93E-14 T 23-04-2016 IPR011053 Single hybrid motif LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 Gene3D G3DSA:3.40.50.20 1 128 1.5E-47 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 SUPERFAMILY SSF56059 95 329 1.75E-60 T 23-04-2016 LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 1.5E-42 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 SMART SM00878 334 443 3.0E-58 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 Gene3D G3DSA:3.30.1490.20 129 201 1.4E-23 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 533 550 - T 23-04-2016 IPR001882 Biotin-binding site LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 Pfam PF00364 Biotin-requiring enzyme 513 575 2.4E-11 T 23-04-2016 IPR000089 Biotin/lipoyl attachment LT40_RS19135 a5cf5279844e4138e2fd48cecc0d4e45 579 Gene3D G3DSA:3.30.470.20 203 447 1.9E-92 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS12640 9138decd2a712de3c7a1a42999c81aef 275 SUPERFAMILY SSF53850 32 256 3.86E-25 T 23-04-2016 LT40_RS12640 9138decd2a712de3c7a1a42999c81aef 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 251 3.0E-14 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS12640 9138decd2a712de3c7a1a42999c81aef 275 SMART SM00062 30 266 0.0043 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS12640 9138decd2a712de3c7a1a42999c81aef 275 Gene3D G3DSA:3.40.190.10 37 145 9.2E-7 T 23-04-2016 LT40_RS13685 f256d8368342db6c3f9a19f35479a713 378 SUPERFAMILY SSF53822 28 373 6.85E-92 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS13685 f256d8368342db6c3f9a19f35479a713 378 PANTHER PTHR30483:SF20 7 376 6.0E-122 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS13685 f256d8368342db6c3f9a19f35479a713 378 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 284 297 2.8E-25 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS13685 f256d8368342db6c3f9a19f35479a713 378 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 29 45 2.8E-25 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS13685 f256d8368342db6c3f9a19f35479a713 378 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 51 67 2.8E-25 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS13685 f256d8368342db6c3f9a19f35479a713 378 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 70 88 2.8E-25 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS13685 f256d8368342db6c3f9a19f35479a713 378 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 335 350 2.8E-25 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 LT40_RS13685 f256d8368342db6c3f9a19f35479a713 378 Gene3D G3DSA:3.40.50.2300 28 228 8.3E-71 T 23-04-2016 LT40_RS13685 f256d8368342db6c3f9a19f35479a713 378 Pfam PF13458 Periplasmic binding protein 29 369 3.7E-66 T 23-04-2016 IPR028081 Leucine-binding protein domain LT40_RS13685 f256d8368342db6c3f9a19f35479a713 378 PANTHER PTHR30483 7 376 6.0E-122 T 23-04-2016 LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 SUPERFAMILY SSF55073 280 435 6.75E-26 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 Gene3D G3DSA:3.30.450.20 143 263 2.4E-12 T 23-04-2016 LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 Pfam PF00563 EAL domain 450 680 1.1E-57 T 23-04-2016 IPR001633 EAL domain LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 Gene3D G3DSA:3.20.20.450 446 693 6.6E-75 T 23-04-2016 IPR001633 EAL domain LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 PANTHER PTHR33121 439 698 1.2E-52 T 23-04-2016 LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 Gene3D G3DSA:3.30.70.270 275 440 8.6E-30 T 23-04-2016 LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 Pfam PF00990 Diguanylate cyclase, GGDEF domain 275 429 3.9E-27 T 23-04-2016 IPR000160 GGDEF domain LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 SMART SM00267 263 434 2.3E-26 T 23-04-2016 IPR000160 GGDEF domain LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 SUPERFAMILY SSF55785 141 261 6.46E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 SMART SM00052 443 685 8.0E-72 T 23-04-2016 IPR001633 EAL domain LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 PANTHER PTHR33121:SF13 439 698 1.2E-52 T 23-04-2016 LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 SUPERFAMILY SSF141868 448 693 2.62E-68 T 23-04-2016 IPR001633 EAL domain LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 270 431 1.4E-18 T 23-04-2016 IPR000160 GGDEF domain LT40_RS20780 94e641858f2750380a5bb394a8e5e224 710 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 270 6.7E-8 T 23-04-2016 IPR000014 PAS domain LT40_RS14810 f0493324dec7366bfcc72a3344fc8120 131 PANTHER PTHR11049 1 131 1.3E-63 T 23-04-2016 LT40_RS14810 f0493324dec7366bfcc72a3344fc8120 131 Gene3D G3DSA:3.10.129.10 3 119 5.6E-23 T 23-04-2016 IPR029069 HotDog domain LT40_RS14810 f0493324dec7366bfcc72a3344fc8120 131 SUPERFAMILY SSF54637 4 121 2.09E-24 T 23-04-2016 IPR029069 HotDog domain LT40_RS14810 f0493324dec7366bfcc72a3344fc8120 131 PANTHER PTHR11049:SF13 1 131 1.3E-63 T 23-04-2016 LT40_RS14810 f0493324dec7366bfcc72a3344fc8120 131 Pfam PF03061 Thioesterase superfamily 17 92 5.7E-13 T 23-04-2016 IPR006683 Thioesterase domain LT40_RS01555 57ae1a94b36eec0687ae4cd65ac64ea0 693 Gene3D G3DSA:3.40.50.300 1 66 5.8E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01555 57ae1a94b36eec0687ae4cd65ac64ea0 693 Gene3D G3DSA:3.40.50.300 106 406 5.8E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01555 57ae1a94b36eec0687ae4cd65ac64ea0 693 Pfam PF13175 AAA ATPase domain 197 399 4.8E-31 T 23-04-2016 LT40_RS01555 57ae1a94b36eec0687ae4cd65ac64ea0 693 Pfam PF13175 AAA ATPase domain 1 50 6.1E-13 T 23-04-2016 LT40_RS01555 57ae1a94b36eec0687ae4cd65ac64ea0 693 SUPERFAMILY SSF52540 1 138 1.72E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01555 57ae1a94b36eec0687ae4cd65ac64ea0 693 SUPERFAMILY SSF52540 195 403 1.72E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00965 cf4f78a9f6e597cd47eebd8f63d4afe5 287 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 14 257 33.894 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00965 cf4f78a9f6e597cd47eebd8f63d4afe5 287 Gene3D G3DSA:3.30.70.580 15 118 1.5E-36 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00965 cf4f78a9f6e597cd47eebd8f63d4afe5 287 Gene3D G3DSA:3.30.70.660 120 256 2.5E-44 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00965 cf4f78a9f6e597cd47eebd8f63d4afe5 287 PIRSF PIRSF001430 14 271 8.7E-72 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00965 cf4f78a9f6e597cd47eebd8f63d4afe5 287 PANTHER PTHR11142 2 273 1.2E-88 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00965 cf4f78a9f6e597cd47eebd8f63d4afe5 287 SUPERFAMILY SSF55120 13 271 4.03E-87 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00965 cf4f78a9f6e597cd47eebd8f63d4afe5 287 Pfam PF01416 tRNA pseudouridine synthase 156 257 5.2E-30 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00965 cf4f78a9f6e597cd47eebd8f63d4afe5 287 Pfam PF01416 tRNA pseudouridine synthase 21 116 8.2E-7 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00965 cf4f78a9f6e597cd47eebd8f63d4afe5 287 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 14 252 8.8E-66 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00965 cf4f78a9f6e597cd47eebd8f63d4afe5 287 PANTHER PTHR11142:SF0 2 273 1.2E-88 T 23-04-2016 LT40_RS07910 9343eef1844646f1860f036624912e78 305 SUPERFAMILY SSF53850 86 297 7.96E-35 T 23-04-2016 LT40_RS07910 9343eef1844646f1860f036624912e78 305 Pfam PF03466 LysR substrate binding domain 92 296 6.1E-34 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS07910 9343eef1844646f1860f036624912e78 305 Gene3D G3DSA:1.10.10.10 7 87 7.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07910 9343eef1844646f1860f036624912e78 305 Gene3D G3DSA:3.40.190.10 88 133 1.8E-6 T 23-04-2016 LT40_RS07910 9343eef1844646f1860f036624912e78 305 Gene3D G3DSA:3.40.190.10 165 266 1.4E-14 T 23-04-2016 LT40_RS07910 9343eef1844646f1860f036624912e78 305 PANTHER PTHR30537:SF1 1 296 7.9E-114 T 23-04-2016 LT40_RS07910 9343eef1844646f1860f036624912e78 305 PANTHER PTHR30537 1 296 7.9E-114 T 23-04-2016 LT40_RS07910 9343eef1844646f1860f036624912e78 305 SUPERFAMILY SSF46785 7 92 8.47E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07910 9343eef1844646f1860f036624912e78 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 6.0E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS03280 97d3df100c766ff641120607ecc3b47a 152 Pfam PF09537 Domain of unknown function (DUF2383) 8 116 1.7E-42 T 23-04-2016 IPR019052 Domain of unknown function DUF2383 LT40_RS03280 97d3df100c766ff641120607ecc3b47a 152 PIRSF PIRSF029477 1 151 7.0E-65 T 23-04-2016 IPR016920 Uncharacterised conserved protein UCP029477 LT40_RS03280 97d3df100c766ff641120607ecc3b47a 152 Gene3D G3DSA:1.20.1260.10 6 140 1.1E-8 T 23-04-2016 IPR012347 Ferritin-related LT40_RS03280 97d3df100c766ff641120607ecc3b47a 152 SUPERFAMILY SSF47240 7 124 5.72E-8 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS03280 97d3df100c766ff641120607ecc3b47a 152 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 8 145 7.1E-47 T 23-04-2016 IPR011971 Conserved hypothetical protein CHP02284 LT40_RS07935 00d64181f463aff87a7c0c9ddd21674c 401 PANTHER PTHR23501 15 376 6.3E-71 T 23-04-2016 LT40_RS07935 00d64181f463aff87a7c0c9ddd21674c 401 PANTHER PTHR23501:SF16 15 376 6.3E-71 T 23-04-2016 LT40_RS07935 00d64181f463aff87a7c0c9ddd21674c 401 Pfam PF07690 Major Facilitator Superfamily 19 346 1.2E-34 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS07935 00d64181f463aff87a7c0c9ddd21674c 401 Gene3D G3DSA:1.20.1250.20 15 196 2.5E-23 T 23-04-2016 LT40_RS07935 00d64181f463aff87a7c0c9ddd21674c 401 SUPERFAMILY SSF103473 13 382 7.59E-50 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS07935 00d64181f463aff87a7c0c9ddd21674c 401 Gene3D G3DSA:1.20.1250.20 213 382 2.5E-12 T 23-04-2016 LT40_RS17420 116bb8bb71a5e34650c035f3c597bfa7 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 1.7E-227 T 23-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 LT40_RS17420 116bb8bb71a5e34650c035f3c597bfa7 490 Gene3D G3DSA:3.40.309.10 266 443 8.1E-69 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS17420 116bb8bb71a5e34650c035f3c597bfa7 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS17420 116bb8bb71a5e34650c035f3c597bfa7 490 Gene3D G3DSA:3.40.605.10 6 265 2.5E-103 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS17420 116bb8bb71a5e34650c035f3c597bfa7 490 PANTHER PTHR11699 1 490 0.0 T 23-04-2016 LT40_RS17420 116bb8bb71a5e34650c035f3c597bfa7 490 Pfam PF00171 Aldehyde dehydrogenase family 16 479 1.6E-177 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS17420 116bb8bb71a5e34650c035f3c597bfa7 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 58.858 T 23-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 LT40_RS17420 116bb8bb71a5e34650c035f3c597bfa7 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS17420 116bb8bb71a5e34650c035f3c597bfa7 490 PANTHER PTHR11699:SF115 1 490 0.0 T 23-04-2016 LT40_RS17420 116bb8bb71a5e34650c035f3c597bfa7 490 SUPERFAMILY SSF53720 4 483 8.12E-171 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 SUPERFAMILY SSF102886 4 301 1.31E-136 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 PRINTS PR00073 Coprogen oxidase signature 124 146 6.0E-86 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 PRINTS PR00073 Coprogen oxidase signature 161 190 6.0E-86 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 PRINTS PR00073 Coprogen oxidase signature 233 260 6.0E-86 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 PRINTS PR00073 Coprogen oxidase signature 47 68 6.0E-86 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 PRINTS PR00073 Coprogen oxidase signature 89 113 6.0E-86 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 PRINTS PR00073 Coprogen oxidase signature 261 287 6.0E-86 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 PRINTS PR00073 Coprogen oxidase signature 30 46 6.0E-86 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 Gene3D G3DSA:3.40.1500.10 3 301 4.1E-135 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 276 55.428 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 Pfam PF01218 Coproporphyrinogen III oxidase 8 301 1.2E-131 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 165 189 - T 23-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 PANTHER PTHR10755 6 302 1.8E-187 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS15935 9a62f213397fa02a36ca147ec007d7da 307 PIRSF PIRSF000166 1 302 4.3E-127 T 23-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 LT40_RS13265 dc95d32ebd34635951c289d3ab875f82 363 Pfam PF01699 Sodium/calcium exchanger protein 218 360 7.8E-7 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 LT40_RS13265 dc95d32ebd34635951c289d3ab875f82 363 Pfam PF01699 Sodium/calcium exchanger protein 41 184 1.3E-14 T 23-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 LT40_RS13265 dc95d32ebd34635951c289d3ab875f82 363 PANTHER PTHR37958 2 362 2.0E-51 T 23-04-2016 LT40_RS13265 dc95d32ebd34635951c289d3ab875f82 363 PANTHER PTHR37958:SF1 2 362 2.0E-51 T 23-04-2016 LT40_RS19410 1a85cf53f29eda9f61352a5fd2a20b62 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 2 104 26.688 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19410 1a85cf53f29eda9f61352a5fd2a20b62 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 3 103 4.8E-42 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19410 1a85cf53f29eda9f61352a5fd2a20b62 104 SUPERFAMILY SSF141091 3 103 9.68E-38 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 LT40_RS19410 1a85cf53f29eda9f61352a5fd2a20b62 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19410 1a85cf53f29eda9f61352a5fd2a20b62 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 3 102 1.0E-38 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 LT40_RS19410 1a85cf53f29eda9f61352a5fd2a20b62 104 PANTHER PTHR21349 3 103 8.4E-45 T 23-04-2016 LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 PANTHER PTHR30126 1 287 1.7E-61 T 23-04-2016 LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 Gene3D G3DSA:3.40.190.10 87 189 1.7E-21 T 23-04-2016 LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 1.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 1.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 1.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 Pfam PF03466 LysR substrate binding domain 86 285 2.0E-36 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 Gene3D G3DSA:1.10.10.10 2 78 6.7E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 PANTHER PTHR30126:SF11 1 287 1.7E-61 T 23-04-2016 LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 Gene3D G3DSA:3.40.190.10 190 255 6.0E-14 T 23-04-2016 LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 SUPERFAMILY SSF53850 86 286 1.3E-34 T 23-04-2016 LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 1.3E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11500 3dae62d07adf413d8b2a7f9e10d4f9c8 287 SUPERFAMILY SSF46785 3 107 1.05E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18995 600ce6150a3e53470a755558d498b711 336 PIRSF PIRSF002825 4 330 8.6E-89 T 23-04-2016 IPR026045 Ferric binding protein LT40_RS18995 600ce6150a3e53470a755558d498b711 336 PANTHER PTHR30006:SF9 15 336 3.0E-131 T 23-04-2016 LT40_RS18995 600ce6150a3e53470a755558d498b711 336 Gene3D G3DSA:3.40.190.10 124 261 8.5E-42 T 23-04-2016 LT40_RS18995 600ce6150a3e53470a755558d498b711 336 SUPERFAMILY SSF53850 20 327 1.28E-68 T 23-04-2016 LT40_RS18995 600ce6150a3e53470a755558d498b711 336 Pfam PF13343 Bacterial extracellular solute-binding protein 73 306 3.8E-28 T 23-04-2016 LT40_RS18995 600ce6150a3e53470a755558d498b711 336 Gene3D G3DSA:3.40.190.10 262 321 8.1E-43 T 23-04-2016 LT40_RS18995 600ce6150a3e53470a755558d498b711 336 Gene3D G3DSA:3.40.190.10 5 121 8.1E-43 T 23-04-2016 LT40_RS18995 600ce6150a3e53470a755558d498b711 336 PANTHER PTHR30006 15 336 3.0E-131 T 23-04-2016 LT40_RS18995 600ce6150a3e53470a755558d498b711 336 TIGRFAM TIGR03261 phnS2: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 7 333 8.8E-158 T 23-04-2016 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative LT40_RS04385 94daec4eb3360389e924ce4dddad7e7b 382 PANTHER PTHR30158 1 365 5.7E-159 T 23-04-2016 LT40_RS04385 94daec4eb3360389e924ce4dddad7e7b 382 PANTHER PTHR30158:SF3 1 365 5.7E-159 T 23-04-2016 LT40_RS04385 94daec4eb3360389e924ce4dddad7e7b 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 362 2.8E-76 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LT40_RS04385 94daec4eb3360389e924ce4dddad7e7b 382 Gene3D G3DSA:2.40.50.100 159 194 9.2E-27 T 23-04-2016 LT40_RS04385 94daec4eb3360389e924ce4dddad7e7b 382 Gene3D G3DSA:2.40.50.100 65 98 9.2E-27 T 23-04-2016 LT40_RS04385 94daec4eb3360389e924ce4dddad7e7b 382 SUPERFAMILY SSF111369 51 287 3.14E-93 T 23-04-2016 LT40_RS04385 94daec4eb3360389e924ce4dddad7e7b 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 280 6.2E-16 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LT40_RS04385 94daec4eb3360389e924ce4dddad7e7b 382 Pfam PF00529 HlyD membrane-fusion protein of T1SS 40 347 1.6E-8 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LT40_RS14475 89cac9f9c9f4524f6397aa3940022574 151 PANTHER PTHR12029:SF31 1 151 9.3E-75 T 23-04-2016 LT40_RS14475 89cac9f9c9f4524f6397aa3940022574 151 SUPERFAMILY SSF75217 1 150 2.22E-45 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases LT40_RS14475 89cac9f9c9f4524f6397aa3940022574 151 Gene3D G3DSA:3.40.1280.10 1 151 9.9E-66 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LT40_RS14475 89cac9f9c9f4524f6397aa3940022574 151 PIRSF PIRSF029256 1 151 1.3E-66 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LT40_RS14475 89cac9f9c9f4524f6397aa3940022574 151 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 150 1.8E-57 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LT40_RS14475 89cac9f9c9f4524f6397aa3940022574 151 PANTHER PTHR12029 1 151 9.3E-75 T 23-04-2016 LT40_RS14475 89cac9f9c9f4524f6397aa3940022574 151 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.072 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LT40_RS14475 89cac9f9c9f4524f6397aa3940022574 151 Pfam PF00588 SpoU rRNA Methylase family 2 142 2.9E-33 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LT40_RS07785 a19adc34eb49213ff4c82504c56efc82 264 Pfam PF01514 Secretory protein of YscJ/FliF family 16 195 8.9E-31 T 23-04-2016 IPR006182 Secretory protein YscJ/FliF LT40_RS07785 a19adc34eb49213ff4c82504c56efc82 264 PANTHER PTHR30046 14 256 7.0E-80 T 23-04-2016 LT40_RS07785 a19adc34eb49213ff4c82504c56efc82 264 PANTHER PTHR30046:SF2 14 256 7.0E-80 T 23-04-2016 LT40_RS07785 a19adc34eb49213ff4c82504c56efc82 264 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 174 186 2.0E-26 T 23-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LT40_RS07785 a19adc34eb49213ff4c82504c56efc82 264 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 126 139 2.0E-26 T 23-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LT40_RS07785 a19adc34eb49213ff4c82504c56efc82 264 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 34 44 2.0E-26 T 23-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LT40_RS07785 a19adc34eb49213ff4c82504c56efc82 264 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 106 121 2.0E-26 T 23-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LT40_RS07785 a19adc34eb49213ff4c82504c56efc82 264 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 86 99 2.0E-26 T 23-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LT40_RS07785 a19adc34eb49213ff4c82504c56efc82 264 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 14 203 1.0E-68 T 23-04-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 Pfam PF07650 KH domain 38 111 4.1E-22 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 SUPERFAMILY SSF54821 108 206 1.31E-41 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 9.8E-42 T 23-04-2016 LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.757 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 Gene3D G3DSA:3.30.300.20 17 107 6.9E-34 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.4E-97 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 SMART SM00322 60 125 3.9E-8 T 23-04-2016 IPR004087 K Homology domain GO:0003676 LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 Gene3D G3DSA:3.30.1140.32 108 207 1.1E-47 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 PANTHER PTHR11760:SF19 2 222 1.6E-145 T 23-04-2016 LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 SUPERFAMILY SSF54814 2 106 2.46E-38 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 LT40_RS18385 90c1758a5be73632fc7017c176e98999 228 PANTHER PTHR11760 2 222 1.6E-145 T 23-04-2016 LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 Gene3D G3DSA:3.40.630.30 117 246 1.9E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 PANTHER PTHR23091:SF122 91 264 7.4E-39 T 23-04-2016 LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 SUPERFAMILY SSF56059 331 436 7.41E-29 T 23-04-2016 LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 SUPERFAMILY SSF56059 497 560 7.41E-29 T 23-04-2016 LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 Gene3D G3DSA:3.30.470.20 320 330 3.7E-12 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 Gene3D G3DSA:3.30.470.20 487 575 3.7E-12 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 Gene3D G3DSA:3.30.470.20 407 434 3.7E-12 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 Gene3D G3DSA:3.30.1490.20 331 406 2.6E-7 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 TIGRFAM TIGR03103 trio_acet_GNAT: GNAT-family acetyltransferase TIGR03103 38 579 4.7E-271 T 23-04-2016 IPR017534 GNAT-acetyltransferase LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 Pfam PF00583 Acetyltransferase (GNAT) family 164 246 9.2E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 Pfam PF08443 RimK-like ATP-grasp domain 329 431 4.2E-8 T 23-04-2016 IPR013651 ATP-grasp fold, RimK-type LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 PANTHER PTHR23091 91 264 7.4E-39 T 23-04-2016 LT40_RS05215 19ee533fffd17cb96c81787e609ece8c 580 SUPERFAMILY SSF55729 63 250 4.87E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS17260 6331d8e6185be4f420a679214e567564 604 SUPERFAMILY SSF103190 60 194 1.67E-22 T 23-04-2016 IPR029151 Periplasmic sensor domain-like LT40_RS17260 6331d8e6185be4f420a679214e567564 604 Pfam PF02743 Cache domain 44 268 2.3E-14 T 23-04-2016 IPR033479 Double Cache domain 1 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 587 1.1E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS17260 6331d8e6185be4f420a679214e567564 604 SUPERFAMILY SSF47384 354 437 8.63E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 Gene3D G3DSA:3.30.450.20 93 184 2.9E-6 T 23-04-2016 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 PANTHER PTHR24423:SF469 185 247 6.1E-144 T 23-04-2016 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 PANTHER PTHR24423:SF469 314 594 6.1E-144 T 23-04-2016 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 PANTHER PTHR24423:SF469 1 51 6.1E-144 T 23-04-2016 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 PIRSF PIRSF036431 2 597 1.0E-196 T 23-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) LT40_RS17260 6331d8e6185be4f420a679214e567564 604 Pfam PF00512 His Kinase A (phospho-acceptor) domain 370 436 5.6E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 Gene3D G3DSA:1.10.287.130 370 434 5.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 538 548 5.67E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 534 5.67E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 569 5.67E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 PANTHER PTHR24423 185 247 6.1E-144 T 23-04-2016 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 PANTHER PTHR24423 314 594 6.1E-144 T 23-04-2016 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 PANTHER PTHR24423 1 51 6.1E-144 T 23-04-2016 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 Gene3D G3DSA:3.30.565.10 440 587 1.6E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS17260 6331d8e6185be4f420a679214e567564 604 SUPERFAMILY SSF55874 426 587 1.19E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS17260 6331d8e6185be4f420a679214e567564 604 SMART SM00388 370 438 2.9E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS17260 6331d8e6185be4f420a679214e567564 604 SMART SM00387 480 591 3.1E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16075 e6463b11ff4475b200374a1ace2048c5 215 SUPERFAMILY SSF53335 13 213 3.48E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS16075 e6463b11ff4475b200374a1ace2048c5 215 Gene3D G3DSA:3.40.50.150 4 213 1.1E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS16075 e6463b11ff4475b200374a1ace2048c5 215 PANTHER PTHR31760:SF0 10 213 3.9E-68 T 23-04-2016 LT40_RS16075 e6463b11ff4475b200374a1ace2048c5 215 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 33 212 3.6E-50 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LT40_RS16075 e6463b11ff4475b200374a1ace2048c5 215 PANTHER PTHR31760 10 213 3.9E-68 T 23-04-2016 LT40_RS16075 e6463b11ff4475b200374a1ace2048c5 215 PIRSF PIRSF003078 6 215 9.1E-53 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LT40_RS16075 e6463b11ff4475b200374a1ace2048c5 215 Pfam PF02527 rRNA small subunit methyltransferase G 28 208 1.9E-56 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LT40_RS16075 e6463b11ff4475b200374a1ace2048c5 215 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 21 210 26.173 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LT40_RS08180 4da3c90153a316b20ddeed91e1224fc2 272 Gene3D G3DSA:3.40.190.10 113 218 4.5E-21 T 23-04-2016 LT40_RS08180 4da3c90153a316b20ddeed91e1224fc2 272 SMART SM00062 35 259 3.5E-42 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS08180 4da3c90153a316b20ddeed91e1224fc2 272 PANTHER PTHR18966 25 260 1.1E-68 T 23-04-2016 LT40_RS08180 4da3c90153a316b20ddeed91e1224fc2 272 SUPERFAMILY SSF53850 9 259 2.66E-55 T 23-04-2016 LT40_RS08180 4da3c90153a316b20ddeed91e1224fc2 272 Gene3D G3DSA:3.40.190.10 219 261 1.2E-29 T 23-04-2016 LT40_RS08180 4da3c90153a316b20ddeed91e1224fc2 272 Gene3D G3DSA:3.40.190.10 33 112 1.2E-29 T 23-04-2016 LT40_RS08180 4da3c90153a316b20ddeed91e1224fc2 272 PANTHER PTHR18966:SF208 25 260 1.1E-68 T 23-04-2016 LT40_RS08180 4da3c90153a316b20ddeed91e1224fc2 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 257 7.6E-48 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS10880 46511b714ee3dfea1232ae49ae8913a0 65 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 18.69 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS10880 46511b714ee3dfea1232ae49ae8913a0 65 PANTHER PTHR34984:SF1 1 53 4.3E-22 T 23-04-2016 LT40_RS10880 46511b714ee3dfea1232ae49ae8913a0 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-7 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS10880 46511b714ee3dfea1232ae49ae8913a0 65 Pfam PF02599 Global regulator protein family 1 52 3.8E-25 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS10880 46511b714ee3dfea1232ae49ae8913a0 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 53 2.9E-24 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS10880 46511b714ee3dfea1232ae49ae8913a0 65 PANTHER PTHR34984 1 53 4.3E-22 T 23-04-2016 LT40_RS10880 46511b714ee3dfea1232ae49ae8913a0 65 SUPERFAMILY SSF117130 1 52 9.42E-20 T 23-04-2016 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 PANTHER PTHR40254 1 463 2.7E-63 T 23-04-2016 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 SUPERFAMILY SSF51905 8 245 4.86E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 205 223 1.7E-5 T 23-04-2016 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 1.7E-5 T 23-04-2016 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.7E-5 T 23-04-2016 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 Gene3D G3DSA:3.50.50.60 9 70 4.0E-15 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 Gene3D G3DSA:3.50.50.60 106 215 4.0E-15 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 Pfam PF13454 FAD-NAD(P)-binding 12 170 9.3E-30 T 23-04-2016 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 PANTHER PTHR40254:SF1 1 463 2.7E-63 T 23-04-2016 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 Gene3D G3DSA:3.50.50.60 216 237 1.1E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 Gene3D G3DSA:3.50.50.60 319 463 1.1E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 173 3.7E-5 T 23-04-2016 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 205 230 3.7E-5 T 23-04-2016 LT40_RS10910 1e4e310ffe026bf6839e9d901d90c458 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 3.7E-5 T 23-04-2016 LT40_RS19940 1705651907953e5b86a1c680a38d0187 388 PANTHER PTHR30068 344 384 3.1E-179 T 23-04-2016 LT40_RS19940 1705651907953e5b86a1c680a38d0187 388 PANTHER PTHR30068 1 327 3.1E-179 T 23-04-2016 LT40_RS19940 1705651907953e5b86a1c680a38d0187 388 PANTHER PTHR30068:SF3 344 384 3.1E-179 T 23-04-2016 LT40_RS19940 1705651907953e5b86a1c680a38d0187 388 PANTHER PTHR30068:SF3 1 327 3.1E-179 T 23-04-2016 LT40_RS19940 1705651907953e5b86a1c680a38d0187 388 Pfam PF01553 Acyltransferase 89 192 1.2E-8 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LT40_RS19940 1705651907953e5b86a1c680a38d0187 388 Gene3D G3DSA:3.40.1130.10 94 241 7.5E-4 T 23-04-2016 LT40_RS19940 1705651907953e5b86a1c680a38d0187 388 SUPERFAMILY SSF69593 87 160 6.41E-6 T 23-04-2016 LT40_RS20955 f32ab143ec55d2d12031f64c96343557 203 SUPERFAMILY SSF46689 19 79 2.34E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS20955 f32ab143ec55d2d12031f64c96343557 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 6.6E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS20955 f32ab143ec55d2d12031f64c96343557 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.6E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS20955 f32ab143ec55d2d12031f64c96343557 203 Gene3D G3DSA:1.10.357.10 20 194 4.5E-23 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS20955 f32ab143ec55d2d12031f64c96343557 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 66 5.4E-15 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS20955 f32ab143ec55d2d12031f64c96343557 203 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 64 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LT40_RS20955 f32ab143ec55d2d12031f64c96343557 203 PANTHER PTHR30055 20 197 1.7E-14 T 23-04-2016 LT40_RS02785 9beb0a6ee5231f742116105c566c624f 227 Pfam PF00072 Response regulator receiver domain 4 113 1.5E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02785 9beb0a6ee5231f742116105c566c624f 227 PANTHER PTHR26402 2 227 1.5E-85 T 23-04-2016 LT40_RS02785 9beb0a6ee5231f742116105c566c624f 227 SMART SM00448 2 113 3.5E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02785 9beb0a6ee5231f742116105c566c624f 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 222 7.0E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS02785 9beb0a6ee5231f742116105c566c624f 227 SUPERFAMILY SSF52172 1 182 1.09E-33 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS02785 9beb0a6ee5231f742116105c566c624f 227 Gene3D G3DSA:3.40.50.2300 1 122 2.6E-32 T 23-04-2016 LT40_RS02785 9beb0a6ee5231f742116105c566c624f 227 Gene3D G3DSA:1.10.10.10 126 225 1.9E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02785 9beb0a6ee5231f742116105c566c624f 227 PANTHER PTHR26402:SF578 2 227 1.5E-85 T 23-04-2016 LT40_RS02785 9beb0a6ee5231f742116105c566c624f 227 SMART SM00862 148 223 8.8E-27 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS04000 13ddfe83cc5e39d5ef00ef5c157bbefd 597 PANTHER PTHR38038:SF1 1 594 6.6E-154 T 23-04-2016 LT40_RS04000 13ddfe83cc5e39d5ef00ef5c157bbefd 597 Pfam PF04348 LppC putative lipoprotein 33 586 5.0E-161 T 23-04-2016 IPR007443 Penicillin-binding protein activator LpoA LT40_RS04000 13ddfe83cc5e39d5ef00ef5c157bbefd 597 PANTHER PTHR38038 1 594 6.6E-154 T 23-04-2016 LT40_RS04000 13ddfe83cc5e39d5ef00ef5c157bbefd 597 SUPERFAMILY SSF53822 251 591 1.49E-75 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS04000 13ddfe83cc5e39d5ef00ef5c157bbefd 597 Gene3D G3DSA:3.40.50.2300 361 516 1.7E-47 T 23-04-2016 LT40_RS04000 13ddfe83cc5e39d5ef00ef5c157bbefd 597 Gene3D G3DSA:3.40.50.2300 250 359 1.4E-53 T 23-04-2016 LT40_RS04000 13ddfe83cc5e39d5ef00ef5c157bbefd 597 Gene3D G3DSA:3.40.50.2300 517 580 1.4E-53 T 23-04-2016 LT40_RS14675 40f1c758b92bb4902578ba0487bef976 223 Gene3D G3DSA:3.40.50.300 1 221 3.5E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14675 40f1c758b92bb4902578ba0487bef976 223 PANTHER PTHR24220:SF470 3 220 1.9E-113 T 23-04-2016 LT40_RS14675 40f1c758b92bb4902578ba0487bef976 223 SMART SM00382 27 214 2.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS14675 40f1c758b92bb4902578ba0487bef976 223 SUPERFAMILY SSF52540 1 220 1.16E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14675 40f1c758b92bb4902578ba0487bef976 223 PANTHER PTHR24220 3 220 1.9E-113 T 23-04-2016 LT40_RS14675 40f1c758b92bb4902578ba0487bef976 223 Pfam PF00005 ABC transporter 18 165 1.2E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS14675 40f1c758b92bb4902578ba0487bef976 223 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 5.1E-85 T 23-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 LT40_RS03130 7eebc38f9ca52a3dbedf12e09a564104 142 SUPERFAMILY SSF102400 1 139 4.05E-42 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 LT40_RS03130 7eebc38f9ca52a3dbedf12e09a564104 142 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 135 7.3E-39 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 LT40_RS03130 7eebc38f9ca52a3dbedf12e09a564104 142 PANTHER PTHR38767 2 142 2.5E-48 T 23-04-2016 LT40_RS03130 7eebc38f9ca52a3dbedf12e09a564104 142 Gene3D G3DSA:3.40.50.10110 1 139 6.8E-46 T 23-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 155 6.0E-26 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 Gene3D G3DSA:1.10.150.20 244 326 9.0E-37 T 23-04-2016 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 SUPERFAMILY SSF47789 250 323 8.89E-26 T 23-04-2016 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 SUPERFAMILY SSF55257 6 53 1.67E-29 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 SUPERFAMILY SSF55257 178 232 1.67E-29 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 Gene3D G3DSA:3.30.1360.10 11 65 2.2E-9 T 23-04-2016 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 Gene3D G3DSA:2.170.120.12 66 176 1.8E-42 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 8.5E-110 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 PANTHER PTHR32108:SF0 1 329 3.1E-152 T 23-04-2016 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 328 1.0E-36 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 SUPERFAMILY SSF56553 53 177 2.09E-42 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 244 307 4.7E-24 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 3.9E-23 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 35.081 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 SMART SM00662 23 233 6.2E-109 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 LT40_RS18475 ba923843012f8c605099d86586a8cbea 333 PANTHER PTHR32108 1 329 3.1E-152 T 23-04-2016 LT40_RS14890 cf961d8e2e8faa9a11cb0fc4fe498b12 197 PANTHER PTHR23133:SF2 1 197 1.2E-100 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LT40_RS14890 cf961d8e2e8faa9a11cb0fc4fe498b12 197 Gene3D G3DSA:3.30.230.40 92 197 2.4E-31 T 23-04-2016 LT40_RS14890 cf961d8e2e8faa9a11cb0fc4fe498b12 197 SUPERFAMILY SSF54211 4 88 2.91E-33 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS14890 cf961d8e2e8faa9a11cb0fc4fe498b12 197 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 197 42.198 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LT40_RS14890 cf961d8e2e8faa9a11cb0fc4fe498b12 197 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 34 176 2.4E-62 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LT40_RS14890 cf961d8e2e8faa9a11cb0fc4fe498b12 197 SUPERFAMILY SSF54211 90 180 1.39E-34 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS14890 cf961d8e2e8faa9a11cb0fc4fe498b12 197 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LT40_RS14890 cf961d8e2e8faa9a11cb0fc4fe498b12 197 PANTHER PTHR23133 1 197 1.2E-100 T 23-04-2016 LT40_RS14890 cf961d8e2e8faa9a11cb0fc4fe498b12 197 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 158 170 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 LT40_RS14890 cf961d8e2e8faa9a11cb0fc4fe498b12 197 Gene3D G3DSA:3.30.230.40 3 90 4.1E-37 T 23-04-2016 LT40_RS03820 7d1b285633129d2cc5d6429d3f886c4c 269 Gene3D G3DSA:3.40.50.300 7 246 9.9E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03820 7d1b285633129d2cc5d6429d3f886c4c 269 PANTHER PTHR24220 10 266 3.0E-168 T 23-04-2016 LT40_RS03820 7d1b285633129d2cc5d6429d3f886c4c 269 SMART SM00382 33 222 1.6E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS03820 7d1b285633129d2cc5d6429d3f886c4c 269 PANTHER PTHR24220:SF368 10 266 3.0E-168 T 23-04-2016 LT40_RS03820 7d1b285633129d2cc5d6429d3f886c4c 269 SUPERFAMILY SSF52540 8 235 2.25E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03820 7d1b285633129d2cc5d6429d3f886c4c 269 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS03820 7d1b285633129d2cc5d6429d3f886c4c 269 Pfam PF00005 ABC transporter 25 172 8.9E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS12125 2a639d3e44c296a99947a77dfe72e5d2 288 PIRSF PIRSF006232 1 288 4.8E-83 T 23-04-2016 IPR012093 Pirin LT40_RS12125 2a639d3e44c296a99947a77dfe72e5d2 288 PANTHER PTHR13903 1 284 9.5E-88 T 23-04-2016 IPR012093 Pirin LT40_RS12125 2a639d3e44c296a99947a77dfe72e5d2 288 Pfam PF02678 Pirin 23 125 5.1E-30 T 23-04-2016 IPR003829 Pirin, N-terminal domain LT40_RS12125 2a639d3e44c296a99947a77dfe72e5d2 288 SUPERFAMILY SSF51182 11 287 4.77E-78 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS12125 2a639d3e44c296a99947a77dfe72e5d2 288 Gene3D G3DSA:2.60.120.10 15 257 3.6E-69 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS12125 2a639d3e44c296a99947a77dfe72e5d2 288 Pfam PF05726 Pirin C-terminal cupin domain 184 284 7.2E-29 T 23-04-2016 IPR008778 Pirin, C-terminal domain LT40_RS07820 8c7b73b5fcc18ee5ce7cb688b07ea7d3 711 PIRSF PIRSF005419 3 697 2.8E-227 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS07820 8c7b73b5fcc18ee5ce7cb688b07ea7d3 711 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 153 171 2.1E-52 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS07820 8c7b73b5fcc18ee5ce7cb688b07ea7d3 711 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 134 150 2.1E-52 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS07820 8c7b73b5fcc18ee5ce7cb688b07ea7d3 711 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 183 200 2.1E-52 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS07820 8c7b73b5fcc18ee5ce7cb688b07ea7d3 711 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 35 48 2.1E-52 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS07820 8c7b73b5fcc18ee5ce7cb688b07ea7d3 711 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 72 91 2.1E-52 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS07820 8c7b73b5fcc18ee5ce7cb688b07ea7d3 711 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 234 248 2.1E-52 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS07820 8c7b73b5fcc18ee5ce7cb688b07ea7d3 711 Pfam PF00771 FHIPEP family 29 683 3.0E-212 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 LT40_RS07820 8c7b73b5fcc18ee5ce7cb688b07ea7d3 711 PANTHER PTHR30161 1 695 9.1E-279 T 23-04-2016 LT40_RS07820 8c7b73b5fcc18ee5ce7cb688b07ea7d3 711 PANTHER PTHR30161:SF2 1 695 9.1E-279 T 23-04-2016 LT40_RS07820 8c7b73b5fcc18ee5ce7cb688b07ea7d3 711 TIGRFAM TIGR01399 hrcV: type III secretion protein, HrcV family 16 692 3.2E-241 T 23-04-2016 IPR006302 Type III secretion protein HrcV GO:0015031|GO:0016021 LT40_RS10500 1512971d5ce443cec45460f8773d91d5 364 SUPERFAMILY SSF51395 1 348 3.44E-102 T 23-04-2016 LT40_RS10500 1512971d5ce443cec45460f8773d91d5 364 Gene3D G3DSA:3.20.20.70 2 346 2.8E-107 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS10500 1512971d5ce443cec45460f8773d91d5 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 341 8.6E-63 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 LT40_RS10500 1512971d5ce443cec45460f8773d91d5 364 PANTHER PTHR22893:SF7 1 345 1.5E-126 T 23-04-2016 LT40_RS10500 1512971d5ce443cec45460f8773d91d5 364 PANTHER PTHR22893 1 345 1.5E-126 T 23-04-2016 LT40_RS13890 ee5d37534c059f1b2680691258553120 306 PANTHER PTHR30537:SF5 1 302 5.9E-107 T 23-04-2016 LT40_RS13890 ee5d37534c059f1b2680691258553120 306 PANTHER PTHR30537 1 302 5.9E-107 T 23-04-2016 LT40_RS13890 ee5d37534c059f1b2680691258553120 306 Pfam PF03466 LysR substrate binding domain 88 298 1.6E-54 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS13890 ee5d37534c059f1b2680691258553120 306 Gene3D G3DSA:1.10.10.10 4 85 2.9E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13890 ee5d37534c059f1b2680691258553120 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.1E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS13890 ee5d37534c059f1b2680691258553120 306 Gene3D G3DSA:3.40.190.10 90 174 2.1E-10 T 23-04-2016 LT40_RS13890 ee5d37534c059f1b2680691258553120 306 Gene3D G3DSA:3.40.190.10 175 264 7.6E-28 T 23-04-2016 LT40_RS13890 ee5d37534c059f1b2680691258553120 306 SUPERFAMILY SSF46785 6 112 1.77E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13890 ee5d37534c059f1b2680691258553120 306 SUPERFAMILY SSF53850 86 300 5.79E-54 T 23-04-2016 LT40_RS14595 5d8ff0f663ad13e0eda58f39adb80e32 344 PANTHER PTHR30486 1 344 3.3E-198 T 23-04-2016 LT40_RS14595 5d8ff0f663ad13e0eda58f39adb80e32 344 Gene3D G3DSA:3.40.50.300 100 342 1.4E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14595 5d8ff0f663ad13e0eda58f39adb80e32 344 Pfam PF00437 Type II/IV secretion system protein 11 266 4.5E-46 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LT40_RS14595 5d8ff0f663ad13e0eda58f39adb80e32 344 SMART SM00382 122 256 0.006 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS14595 5d8ff0f663ad13e0eda58f39adb80e32 344 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 9.9E-154 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 LT40_RS14595 5d8ff0f663ad13e0eda58f39adb80e32 344 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LT40_RS14595 5d8ff0f663ad13e0eda58f39adb80e32 344 SUPERFAMILY SSF52540 5 335 1.05E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14595 5d8ff0f663ad13e0eda58f39adb80e32 344 PANTHER PTHR30486:SF6 1 344 3.3E-198 T 23-04-2016 LT40_RS16995 924bb5ee32e24322a830d6b01f42c8a8 197 Gene3D G3DSA:3.40.50.360 3 177 1.1E-31 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS16995 924bb5ee32e24322a830d6b01f42c8a8 197 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 3 171 1.0E-72 T 23-04-2016 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 LT40_RS16995 924bb5ee32e24322a830d6b01f42c8a8 197 PANTHER PTHR30543 1 192 5.8E-43 T 23-04-2016 LT40_RS16995 924bb5ee32e24322a830d6b01f42c8a8 197 SUPERFAMILY SSF52218 1 170 4.81E-29 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS16995 924bb5ee32e24322a830d6b01f42c8a8 197 Pfam PF03358 NADPH-dependent FMN reductase 1 139 6.4E-31 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 LT40_RS16995 924bb5ee32e24322a830d6b01f42c8a8 197 PANTHER PTHR30543:SF1 1 192 5.8E-43 T 23-04-2016 LT40_RS10185 fa6035060d41f7faaf993a889ab79989 251 Gene3D G3DSA:3.40.50.300 3 234 1.5E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10185 fa6035060d41f7faaf993a889ab79989 251 SMART SM00382 27 211 1.1E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10185 fa6035060d41f7faaf993a889ab79989 251 SUPERFAMILY SSF52540 3 225 2.09E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10185 fa6035060d41f7faaf993a889ab79989 251 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS10185 fa6035060d41f7faaf993a889ab79989 251 Pfam PF00005 ABC transporter 18 167 2.2E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS10185 fa6035060d41f7faaf993a889ab79989 251 PANTHER PTHR24220 4 240 6.1E-87 T 23-04-2016 LT40_RS10185 fa6035060d41f7faaf993a889ab79989 251 PANTHER PTHR24220:SF309 4 240 6.1E-87 T 23-04-2016 LT40_RS17145 8d45ea37cd605fdccd97a96c17996827 455 SMART SM01118 2 207 9.8E-32 T 23-04-2016 IPR023577 CYTH domain LT40_RS17145 8d45ea37cd605fdccd97a96c17996827 455 Pfam PF01928 CYTH domain 3 201 6.9E-33 T 23-04-2016 IPR023577 CYTH domain LT40_RS17145 8d45ea37cd605fdccd97a96c17996827 455 Gene3D G3DSA:2.40.320.10 1 208 1.4E-29 T 23-04-2016 IPR023577 CYTH domain LT40_RS17145 8d45ea37cd605fdccd97a96c17996827 455 PANTHER PTHR39569:SF1 2 454 9.3E-108 T 23-04-2016 LT40_RS17145 8d45ea37cd605fdccd97a96c17996827 455 SUPERFAMILY SSF55154 1 209 2.13E-39 T 23-04-2016 IPR033469 CYTH-like domain LT40_RS17145 8d45ea37cd605fdccd97a96c17996827 455 PANTHER PTHR39569 2 454 9.3E-108 T 23-04-2016 LT40_RS20520 36317f0bfabe60386767637573cff714 134 Pfam PF14346 Domain of unknown function (DUF4398) 29 126 7.5E-25 T 23-04-2016 IPR025511 Domain of unknown function DUF4398 LT40_RS10890 6a73c1de85b1eb1104f4c0456f2d7906 153 PANTHER PTHR26402 3 127 7.9E-30 T 23-04-2016 LT40_RS10890 6a73c1de85b1eb1104f4c0456f2d7906 153 SUPERFAMILY SSF52172 5 129 7.12E-29 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10890 6a73c1de85b1eb1104f4c0456f2d7906 153 Pfam PF00072 Response regulator receiver domain 5 127 2.2E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS10890 6a73c1de85b1eb1104f4c0456f2d7906 153 Gene3D G3DSA:3.40.50.2300 5 130 2.2E-32 T 23-04-2016 LT40_RS10890 6a73c1de85b1eb1104f4c0456f2d7906 153 SMART SM00448 3 127 1.6E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS08045 0258b5abbf7a4fa26a9b2b176094f85a 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 69 101 9.7E-7 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS08045 0258b5abbf7a4fa26a9b2b176094f85a 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 164 184 4.2E-4 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS08045 0258b5abbf7a4fa26a9b2b176094f85a 203 SUPERFAMILY SSF51161 164 192 1.17E-26 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS08045 0258b5abbf7a4fa26a9b2b176094f85a 203 SUPERFAMILY SSF51161 46 137 1.17E-26 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS08045 0258b5abbf7a4fa26a9b2b176094f85a 203 PANTHER PTHR22572 35 132 2.4E-17 T 23-04-2016 LT40_RS08045 0258b5abbf7a4fa26a9b2b176094f85a 203 PANTHER PTHR22572 165 193 2.4E-17 T 23-04-2016 LT40_RS08045 0258b5abbf7a4fa26a9b2b176094f85a 203 Gene3D G3DSA:2.160.10.10 48 195 4.6E-25 T 23-04-2016 LT40_RS08045 0258b5abbf7a4fa26a9b2b176094f85a 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 59 87 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LT40_RS14000 b1fe01cc5a0a598c2cce2de2ce8a3c4a 634 Pfam PF13667 ThiC-associated domain 24 106 3.7E-32 T 23-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 LT40_RS14000 b1fe01cc5a0a598c2cce2de2ce8a3c4a 634 PANTHER PTHR30557 23 104 0.0 T 23-04-2016 LT40_RS14000 b1fe01cc5a0a598c2cce2de2ce8a3c4a 634 PANTHER PTHR30557 197 631 0.0 T 23-04-2016 LT40_RS14000 b1fe01cc5a0a598c2cce2de2ce8a3c4a 634 PANTHER PTHR30557 138 168 0.0 T 23-04-2016 LT40_RS14000 b1fe01cc5a0a598c2cce2de2ce8a3c4a 634 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 145 597 7.3E-218 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 LT40_RS14000 b1fe01cc5a0a598c2cce2de2ce8a3c4a 634 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 145 600 55.859 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 LT40_RS14000 b1fe01cc5a0a598c2cce2de2ce8a3c4a 634 Pfam PF01964 Radical SAM ThiC family 147 595 2.0E-199 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 LT40_RS14000 b1fe01cc5a0a598c2cce2de2ce8a3c4a 634 PANTHER PTHR30557:SF1 23 104 0.0 T 23-04-2016 LT40_RS14000 b1fe01cc5a0a598c2cce2de2ce8a3c4a 634 PANTHER PTHR30557:SF1 197 631 0.0 T 23-04-2016 LT40_RS14000 b1fe01cc5a0a598c2cce2de2ce8a3c4a 634 PANTHER PTHR30557:SF1 138 168 0.0 T 23-04-2016 LT40_RS02370 99f424c65b332c9a96b18c260f390a05 454 PANTHER PTHR30288:SF0 1 451 7.0E-48 T 23-04-2016 LT40_RS02370 99f424c65b332c9a96b18c260f390a05 454 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 8 104 5.9E-19 T 23-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 LT40_RS02370 99f424c65b332c9a96b18c260f390a05 454 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 214 436 1.6E-45 T 23-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 LT40_RS02370 99f424c65b332c9a96b18c260f390a05 454 PANTHER PTHR30288 1 451 7.0E-48 T 23-04-2016 LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 Gene3D G3DSA:3.40.190.10 90 183 1.7E-21 T 23-04-2016 LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 SUPERFAMILY SSF46785 1 89 1.13E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 PANTHER PTHR30126 1 309 2.6E-206 T 23-04-2016 LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 Pfam PF03466 LysR substrate binding domain 89 277 1.7E-39 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.9E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 Gene3D G3DSA:3.40.190.10 184 261 8.6E-28 T 23-04-2016 LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 PANTHER PTHR30126:SF6 1 309 2.6E-206 T 23-04-2016 LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 Gene3D G3DSA:1.10.10.10 1 82 1.2E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01865 72b47d28adadf30375a4ad9e48694fa8 324 SUPERFAMILY SSF53850 90 321 1.63E-41 T 23-04-2016 LT40_RS13875 18f9139181025b561f8116fc2644972e 436 SMART SM00345 14 73 4.2E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS13875 18f9139181025b561f8116fc2644972e 436 Gene3D G3DSA:1.10.10.10 13 77 9.6E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13875 18f9139181025b561f8116fc2644972e 436 Gene3D G3DSA:3.40.640.10 128 328 3.1E-24 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS13875 18f9139181025b561f8116fc2644972e 436 SUPERFAMILY SSF53383 88 429 5.97E-43 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS13875 18f9139181025b561f8116fc2644972e 436 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 9.9E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS13875 18f9139181025b561f8116fc2644972e 436 SUPERFAMILY SSF46785 4 80 7.58E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13875 18f9139181025b561f8116fc2644972e 436 Pfam PF00155 Aminotransferase class I and II 154 423 5.2E-10 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS13875 18f9139181025b561f8116fc2644972e 436 PANTHER PTHR11751 152 431 1.8E-24 T 23-04-2016 LT40_RS13945 322e41b2bbf71010909326bb0cb3beda 233 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 30 185 8.4E-38 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component LT40_RS13945 322e41b2bbf71010909326bb0cb3beda 233 Gene3D G3DSA:3.40.50.10610 18 192 3.2E-13 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component LT40_RS13945 322e41b2bbf71010909326bb0cb3beda 233 SUPERFAMILY SSF159594 29 189 1.39E-21 T 23-04-2016 LT40_RS17915 def3896ce89d98099f3c6b5c834aee47 738 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 525 724 1.4E-48 T 23-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 LT40_RS17915 def3896ce89d98099f3c6b5c834aee47 738 Pfam PF02706 Chain length determinant protein 16 268 1.5E-33 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LT40_RS17915 def3896ce89d98099f3c6b5c834aee47 738 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 546 667 5.9E-13 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LT40_RS17915 def3896ce89d98099f3c6b5c834aee47 738 PANTHER PTHR32309 36 122 3.4E-151 T 23-04-2016 LT40_RS17915 def3896ce89d98099f3c6b5c834aee47 738 PANTHER PTHR32309 203 738 3.4E-151 T 23-04-2016 LT40_RS17915 def3896ce89d98099f3c6b5c834aee47 738 SUPERFAMILY SSF52540 544 723 5.59E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17915 def3896ce89d98099f3c6b5c834aee47 738 Gene3D G3DSA:3.40.50.300 544 720 3.5E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17915 def3896ce89d98099f3c6b5c834aee47 738 Pfam PF13807 G-rich domain on putative tyrosine kinase 385 467 6.3E-28 T 23-04-2016 IPR032807 Tyrosine kinase, G-rich domain LT40_RS17915 def3896ce89d98099f3c6b5c834aee47 738 PANTHER PTHR32309:SF17 36 122 3.4E-151 T 23-04-2016 LT40_RS17915 def3896ce89d98099f3c6b5c834aee47 738 PANTHER PTHR32309:SF17 203 738 3.4E-151 T 23-04-2016 LT40_RS13250 9bf0804f3aa1214c9415109589d14248 220 Gene3D G3DSA:1.10.10.60 17 74 1.5E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS13250 9bf0804f3aa1214c9415109589d14248 220 Pfam PF08362 YcdC-like protein, C-terminal region 75 216 1.8E-55 T 23-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 LT40_RS13250 9bf0804f3aa1214c9415109589d14248 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 8.8E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS13250 9bf0804f3aa1214c9415109589d14248 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 8.8E-6 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS13250 9bf0804f3aa1214c9415109589d14248 220 Gene3D G3DSA:1.10.357.10 75 216 3.0E-58 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS13250 9bf0804f3aa1214c9415109589d14248 220 PANTHER PTHR30055:SF42 11 216 2.0E-81 T 23-04-2016 LT40_RS13250 9bf0804f3aa1214c9415109589d14248 220 SUPERFAMILY SSF48498 92 216 5.09E-43 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LT40_RS13250 9bf0804f3aa1214c9415109589d14248 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 1.9E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS13250 9bf0804f3aa1214c9415109589d14248 220 PANTHER PTHR30055 11 216 2.0E-81 T 23-04-2016 LT40_RS13250 9bf0804f3aa1214c9415109589d14248 220 SUPERFAMILY SSF46689 17 96 4.26E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS00560 41c91803d9251e34a41cec95c320d623 284 SUPERFAMILY SSF51261 60 281 3.14E-52 T 23-04-2016 IPR011055 Duplicated hybrid motif LT40_RS00560 41c91803d9251e34a41cec95c320d623 284 Pfam PF01551 Peptidase family M23 184 277 1.5E-30 T 23-04-2016 IPR016047 Peptidase M23 LT40_RS00560 41c91803d9251e34a41cec95c320d623 284 Gene3D G3DSA:2.70.70.10 156 282 5.5E-39 T 23-04-2016 LT40_RS00560 41c91803d9251e34a41cec95c320d623 284 Pfam PF01476 LysM domain 60 101 8.8E-11 T 23-04-2016 IPR018392 LysM domain LT40_RS00560 41c91803d9251e34a41cec95c320d623 284 PANTHER PTHR21666 165 284 8.3E-41 T 23-04-2016 LT40_RS00560 41c91803d9251e34a41cec95c320d623 284 Gene3D G3DSA:3.10.350.10 59 101 1.9E-14 T 23-04-2016 IPR018392 LysM domain LT40_RS00560 41c91803d9251e34a41cec95c320d623 284 SMART SM00257 59 103 2.3E-9 T 23-04-2016 IPR018392 LysM domain LT40_RS13070 2cba036d5e987691a8af5e6866df2d86 147 PANTHER PTHR22924 5 146 3.4E-41 T 23-04-2016 LT40_RS13070 2cba036d5e987691a8af5e6866df2d86 147 SUPERFAMILY SSF46458 5 145 2.99E-37 T 23-04-2016 IPR009050 Globin-like LT40_RS13070 2cba036d5e987691a8af5e6866df2d86 147 PANTHER PTHR22924:SF49 5 146 3.4E-41 T 23-04-2016 LT40_RS13070 2cba036d5e987691a8af5e6866df2d86 147 Pfam PF00042 Globin 10 105 4.0E-10 T 23-04-2016 IPR000971 Globin GO:0019825|GO:0020037 LT40_RS13070 2cba036d5e987691a8af5e6866df2d86 147 Gene3D G3DSA:1.10.490.10 5 145 3.2E-47 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 Pfam PF01565 FAD binding domain 39 162 2.3E-10 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 Pfam PF09330 D-lactate dehydrogenase, membrane binding 269 558 4.1E-142 T 23-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 PANTHER PTHR11748:SF82 1 182 8.4E-56 T 23-04-2016 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 PANTHER PTHR11748:SF82 233 308 8.4E-56 T 23-04-2016 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 SUPERFAMILY SSF56176 2 261 3.04E-71 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 Gene3D G3DSA:3.30.1370.20 426 510 9.6E-43 T 23-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 PIRSF PIRSF000101 1 560 3.1E-280 T 23-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 Gene3D G3DSA:3.30.465.10 98 259 2.9E-79 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 SUPERFAMILY SSF55103 266 558 1.28E-113 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 PANTHER PTHR11748 1 182 8.4E-56 T 23-04-2016 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 PANTHER PTHR11748 233 308 8.4E-56 T 23-04-2016 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 Gene3D G3DSA:3.30.70.610 368 425 5.2E-38 T 23-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 Gene3D G3DSA:3.30.70.610 260 301 5.2E-38 T 23-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 LT40_RS08495 3f3b71533b38689c0260cdcb34e22aa7 560 Gene3D G3DSA:3.30.43.10 2 95 3.5E-11 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LT40_RS07995 618e4e3e17522905c1320e759a43b6e8 226 Pfam PF01791 DeoC/LacD family aldolase 11 216 1.4E-19 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 LT40_RS07995 618e4e3e17522905c1320e759a43b6e8 226 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 7 221 34.76 T 23-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 LT40_RS07995 618e4e3e17522905c1320e759a43b6e8 226 SMART SM01133 8 219 3.5E-97 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 LT40_RS07995 618e4e3e17522905c1320e759a43b6e8 226 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 9 217 1.1E-85 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 LT40_RS07995 618e4e3e17522905c1320e759a43b6e8 226 Gene3D G3DSA:3.20.20.70 4 219 2.4E-89 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS07995 618e4e3e17522905c1320e759a43b6e8 226 PANTHER PTHR10889 5 219 4.5E-103 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 LT40_RS07995 618e4e3e17522905c1320e759a43b6e8 226 PIRSF PIRSF001357 2 224 2.7E-72 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 LT40_RS07995 618e4e3e17522905c1320e759a43b6e8 226 SUPERFAMILY SSF51569 7 219 1.05E-79 T 23-04-2016 LT40_RS09575 a413e51652f73e31ed3e8dfa074d8658 268 PIRSF PIRSF018982 1 254 1.1E-103 T 23-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 LT40_RS09575 a413e51652f73e31ed3e8dfa074d8658 268 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 10 243 4.7E-93 T 23-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 LT40_RS09575 a413e51652f73e31ed3e8dfa074d8658 268 PANTHER PTHR39330 10 260 1.8E-110 T 23-04-2016 LT40_RS09575 a413e51652f73e31ed3e8dfa074d8658 268 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 2 243 38.128 T 23-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 LT40_RS01245 2a65408538b379c56cb5d4d854555ffc 397 TIGRFAM TIGR00843 benE: benzoate transporter 14 392 2.2E-130 T 23-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 LT40_RS01245 2a65408538b379c56cb5d4d854555ffc 397 PANTHER PTHR30199:SF0 10 395 2.5E-160 T 23-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 LT40_RS01245 2a65408538b379c56cb5d4d854555ffc 397 Pfam PF03594 Benzoate membrane transport protein 15 390 6.2E-157 T 23-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 LT40_RS01245 2a65408538b379c56cb5d4d854555ffc 397 PANTHER PTHR30199 10 395 2.5E-160 T 23-04-2016 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 PIRSF PIRSF000197 72 1317 0.0 T 23-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 908 919 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 PANTHER PTHR11699:SF18 652 1108 2.1E-177 T 23-04-2016 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 Gene3D G3DSA:1.10.2060.10 142 258 3.2E-53 T 23-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 PANTHER PTHR11699 652 1108 2.1E-177 T 23-04-2016 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 SUPERFAMILY SSF51730 260 616 4.32E-123 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 Pfam PF01619 Proline dehydrogenase 268 567 9.2E-100 T 23-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 SUPERFAMILY SSF81935 86 259 1.96E-65 T 23-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 Gene3D G3DSA:3.40.605.10 658 895 9.4E-69 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 Gene3D G3DSA:3.20.20.220 259 615 1.8E-120 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 SUPERFAMILY SSF53720 655 1108 3.93E-129 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 SUPERFAMILY SSF47598 3 45 3.56E-10 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 608 1108 7.9E-244 T 23-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 Pfam PF00171 Aldehyde dehydrogenase family 657 1105 2.0E-115 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 Gene3D G3DSA:3.40.309.10 896 1085 6.2E-47 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 Gene3D G3DSA:1.20.5.550 85 136 5.2E-25 T 23-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 146 257 4.9E-45 T 23-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 LT40_RS17635 5d9d2202d971fa71da1208ebe6f1238e 1317 Gene3D G3DSA:3.30.450.40 1176 1276 1.1E-4 T 23-04-2016 IPR029016 GAF domain-like LT40_RS14935 53f3a3e750d75b00295d7d90f1ce842a 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS14935 53f3a3e750d75b00295d7d90f1ce842a 257 SMART SM00382 32 230 1.3E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS14935 53f3a3e750d75b00295d7d90f1ce842a 257 Pfam PF00005 ABC transporter 23 182 2.1E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS14935 53f3a3e750d75b00295d7d90f1ce842a 257 SUPERFAMILY SSF52540 8 252 8.47E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14935 53f3a3e750d75b00295d7d90f1ce842a 257 PANTHER PTHR24220 9 255 1.4E-154 T 23-04-2016 LT40_RS14935 53f3a3e750d75b00295d7d90f1ce842a 257 PIRSF PIRSF039085 4 257 1.1E-114 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS14935 53f3a3e750d75b00295d7d90f1ce842a 257 PANTHER PTHR24220:SF472 9 255 1.4E-154 T 23-04-2016 LT40_RS14935 53f3a3e750d75b00295d7d90f1ce842a 257 Gene3D G3DSA:3.40.50.300 6 254 1.1E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03340 1580a394df82345190236ab7acf2f68b 399 PANTHER PTHR11751 18 397 7.6E-268 T 23-04-2016 LT40_RS03340 1580a394df82345190236ab7acf2f68b 399 SUPERFAMILY SSF53383 8 395 2.5E-107 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS03340 1580a394df82345190236ab7acf2f68b 399 Gene3D G3DSA:3.40.640.10 50 263 4.2E-62 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS03340 1580a394df82345190236ab7acf2f68b 399 PANTHER PTHR11751:SF302 18 397 7.6E-268 T 23-04-2016 LT40_RS03340 1580a394df82345190236ab7acf2f68b 399 Pfam PF00155 Aminotransferase class I and II 37 387 1.2E-59 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS03340 1580a394df82345190236ab7acf2f68b 399 Gene3D G3DSA:3.90.1150.10 264 395 5.8E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS08280 924a3cda80c5744f1c489e0fddbd5b86 316 PANTHER PTHR30472:SF19 12 316 7.2E-81 T 23-04-2016 LT40_RS08280 924a3cda80c5744f1c489e0fddbd5b86 316 Gene3D G3DSA:1.10.3470.10 26 314 2.1E-42 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS08280 924a3cda80c5744f1c489e0fddbd5b86 316 SUPERFAMILY SSF81345 11 311 2.88E-44 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS08280 924a3cda80c5744f1c489e0fddbd5b86 316 Pfam PF01032 FecCD transport family 26 311 7.1E-40 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LT40_RS08280 924a3cda80c5744f1c489e0fddbd5b86 316 PANTHER PTHR30472 12 316 7.2E-81 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 Gene3D G3DSA:3.40.50.970 3 180 2.8E-48 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 SUPERFAMILY SSF52518 357 557 5.49E-55 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 SUPERFAMILY SSF52518 4 181 2.02E-41 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 PANTHER PTHR18968:SF12 1 572 2.8E-286 T 23-04-2016 LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 1.0E-34 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 170 1.5E-39 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 318 6.1E-31 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 Gene3D G3DSA:3.40.50.970 349 555 6.9E-56 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 SUPERFAMILY SSF52467 181 346 1.69E-42 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 Gene3D G3DSA:3.40.50.1220 184 340 9.1E-42 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS10340 4c3957ba1069dfb961d8d30784eb6a83 572 PANTHER PTHR18968 1 572 2.8E-286 T 23-04-2016 LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 Pfam PF03466 LysR substrate binding domain 87 272 2.0E-33 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 SUPERFAMILY SSF53850 88 273 4.89E-29 T 23-04-2016 LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 PANTHER PTHR30126:SF8 1 286 2.1E-116 T 23-04-2016 LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 Gene3D G3DSA:1.10.10.10 1 84 1.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 Gene3D G3DSA:3.40.190.10 192 262 8.4E-12 T 23-04-2016 LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 SUPERFAMILY SSF46785 1 109 1.7E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 9.5E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 Gene3D G3DSA:3.40.190.10 88 191 1.5E-18 T 23-04-2016 LT40_RS05140 53e48ccfbffdd464fb98f1480480a358 297 PANTHER PTHR30126 1 286 2.1E-116 T 23-04-2016 LT40_RS02850 23fae390e6ec0dcf85bd14334a147a96 162 PANTHER PTHR34584 3 162 8.2E-21 T 23-04-2016 LT40_RS02850 23fae390e6ec0dcf85bd14334a147a96 162 PIRSF PIRSF019239 1 162 1.6E-29 T 23-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 LT40_RS02850 23fae390e6ec0dcf85bd14334a147a96 162 PANTHER PTHR34584:SF1 3 162 8.2E-21 T 23-04-2016 LT40_RS02850 23fae390e6ec0dcf85bd14334a147a96 162 Pfam PF01899 Na+/H+ ion antiporter subunit 12 160 2.3E-34 T 23-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 LT40_RS14115 1139ad605ab328f814c15cbbcf2edc5f 563 Gene3D G3DSA:1.20.1560.10 5 324 1.1E-28 T 23-04-2016 LT40_RS14115 1139ad605ab328f814c15cbbcf2edc5f 563 Pfam PF00005 ABC transporter 354 492 2.2E-17 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS14115 1139ad605ab328f814c15cbbcf2edc5f 563 Gene3D G3DSA:3.40.50.300 353 553 1.2E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14115 1139ad605ab328f814c15cbbcf2edc5f 563 PANTHER PTHR24221:SF161 1 558 4.0E-43 T 23-04-2016 LT40_RS14115 1139ad605ab328f814c15cbbcf2edc5f 563 PANTHER PTHR24221 1 558 4.0E-43 T 23-04-2016 LT40_RS14115 1139ad605ab328f814c15cbbcf2edc5f 563 SMART SM00382 360 538 1.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS14115 1139ad605ab328f814c15cbbcf2edc5f 563 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS14115 1139ad605ab328f814c15cbbcf2edc5f 563 SUPERFAMILY SSF90123 6 324 1.57E-30 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS14115 1139ad605ab328f814c15cbbcf2edc5f 563 Pfam PF00664 ABC transporter transmembrane region 20 289 6.7E-11 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS14115 1139ad605ab328f814c15cbbcf2edc5f 563 SUPERFAMILY SSF52540 353 551 6.12E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 128 141 - T 23-04-2016 IPR033135 ClpP, histidine active site LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 19 209 43.084 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 19 208 1.5E-104 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 Gene3D G3DSA:3.90.226.10 19 208 1.5E-88 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 PANTHER PTHR10381:SF22 3 211 9.3E-137 T 23-04-2016 LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 PANTHER PTHR10381 3 211 9.3E-137 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 SUPERFAMILY SSF52096 27 209 3.19E-73 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 Pfam PF00574 Clp protease 29 208 3.4E-87 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 106 117 - T 23-04-2016 IPR018215 ClpP, Ser active site LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 PRINTS PR00127 Clp protease catalytic subunit P signature 35 50 1.3E-51 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 PRINTS PR00127 Clp protease catalytic subunit P signature 106 123 1.3E-51 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 PRINTS PR00127 Clp protease catalytic subunit P signature 75 95 1.3E-51 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 PRINTS PR00127 Clp protease catalytic subunit P signature 127 146 1.3E-51 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LT40_RS02100 e48caa76a80f5bc82bab32ddd3099f9a 211 PRINTS PR00127 Clp protease catalytic subunit P signature 184 203 1.3E-51 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LT40_RS08100 d6250ffe6fe56e9d691ba9fdce78ddb2 145 Gene3D G3DSA:3.40.50.2300 3 37 3.5E-6 T 23-04-2016 LT40_RS08100 d6250ffe6fe56e9d691ba9fdce78ddb2 145 SMART SM00862 58 132 2.3E-13 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS08100 d6250ffe6fe56e9d691ba9fdce78ddb2 145 Gene3D G3DSA:1.10.10.10 38 135 1.7E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08100 d6250ffe6fe56e9d691ba9fdce78ddb2 145 SUPERFAMILY SSF46894 31 133 1.45E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS08100 d6250ffe6fe56e9d691ba9fdce78ddb2 145 SUPERFAMILY SSF52172 2 31 7.55E-8 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS08100 d6250ffe6fe56e9d691ba9fdce78ddb2 145 PANTHER PTHR26402:SF552 1 144 1.5E-40 T 23-04-2016 LT40_RS08100 d6250ffe6fe56e9d691ba9fdce78ddb2 145 Pfam PF00486 Transcriptional regulatory protein, C terminal 61 132 1.4E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS08100 d6250ffe6fe56e9d691ba9fdce78ddb2 145 PANTHER PTHR26402 1 144 1.5E-40 T 23-04-2016 LT40_RS20825 69e7bd3060d01016c6241bc9df47bc61 222 PANTHER PTHR33747:SF2 10 222 1.4E-45 T 23-04-2016 LT40_RS20825 69e7bd3060d01016c6241bc9df47bc61 222 Pfam PF03695 Uncharacterised protein family (UPF0149) 18 186 2.4E-26 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 LT40_RS20825 69e7bd3060d01016c6241bc9df47bc61 222 SUPERFAMILY SSF103642 202 221 1.13E-7 T 23-04-2016 LT40_RS20825 69e7bd3060d01016c6241bc9df47bc61 222 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 15 186 4.7E-29 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 LT40_RS20825 69e7bd3060d01016c6241bc9df47bc61 222 Gene3D G3DSA:3.10.450.50 183 220 2.5E-12 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS20825 69e7bd3060d01016c6241bc9df47bc61 222 PANTHER PTHR33747 10 222 1.4E-45 T 23-04-2016 LT40_RS20825 69e7bd3060d01016c6241bc9df47bc61 222 SUPERFAMILY SSF101327 19 186 4.18E-21 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 LT40_RS20825 69e7bd3060d01016c6241bc9df47bc61 222 Pfam PF02810 SEC-C motif 204 221 1.7E-10 T 23-04-2016 IPR004027 SEC-C motif LT40_RS19185 67572e9d75e3d93b724ed4179fa53dfd 239 Gene3D G3DSA:2.60.130.10 9 238 3.1E-78 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 LT40_RS19185 67572e9d75e3d93b724ed4179fa53dfd 239 PANTHER PTHR33711 8 239 1.2E-128 T 23-04-2016 LT40_RS19185 67572e9d75e3d93b724ed4179fa53dfd 239 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 17 238 6.5E-109 T 23-04-2016 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 LT40_RS19185 67572e9d75e3d93b724ed4179fa53dfd 239 PANTHER PTHR33711:SF1 8 239 1.2E-128 T 23-04-2016 LT40_RS19185 67572e9d75e3d93b724ed4179fa53dfd 239 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 12 43 5.8E-14 T 23-04-2016 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3|UniPathway: UPA00157 LT40_RS19185 67572e9d75e3d93b724ed4179fa53dfd 239 Pfam PF00775 Dioxygenase 48 230 3.7E-59 T 23-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 LT40_RS19185 67572e9d75e3d93b724ed4179fa53dfd 239 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 81 109 - T 23-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 LT40_RS19185 67572e9d75e3d93b724ed4179fa53dfd 239 SUPERFAMILY SSF49482 10 238 1.83E-75 T 23-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 LT40_RS19865 621bf3a4263084ac0a5ffd9a3efc6818 303 SUPERFAMILY SSF46955 12 106 1.83E-19 T 23-04-2016 IPR009061 Putative DNA-binding domain LT40_RS19865 621bf3a4263084ac0a5ffd9a3efc6818 303 Pfam PF13411 MerR HTH family regulatory protein 12 79 2.8E-16 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS19865 621bf3a4263084ac0a5ffd9a3efc6818 303 PANTHER PTHR30204:SF19 3 240 9.5E-66 T 23-04-2016 LT40_RS19865 621bf3a4263084ac0a5ffd9a3efc6818 303 SMART SM00422 11 80 4.7E-20 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS19865 621bf3a4263084ac0a5ffd9a3efc6818 303 Gene3D G3DSA:1.10.1660.10 12 107 2.8E-21 T 23-04-2016 LT40_RS19865 621bf3a4263084ac0a5ffd9a3efc6818 303 PANTHER PTHR30204 3 240 9.5E-66 T 23-04-2016 LT40_RS17020 1d44f1f961d796eaca8e0aeb05b98651 458 Gene3D G3DSA:3.10.20.70 11 123 9.9E-18 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS17020 1d44f1f961d796eaca8e0aeb05b98651 458 PANTHER PTHR20852:SF7 12 458 1.6E-147 T 23-04-2016 LT40_RS17020 1d44f1f961d796eaca8e0aeb05b98651 458 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 257 272 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS17020 1d44f1f961d796eaca8e0aeb05b98651 458 Gene3D G3DSA:3.30.590.10 124 444 7.8E-95 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 LT40_RS17020 1d44f1f961d796eaca8e0aeb05b98651 458 Pfam PF00120 Glutamine synthetase, catalytic domain 121 454 1.9E-109 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS17020 1d44f1f961d796eaca8e0aeb05b98651 458 SUPERFAMILY SSF54368 11 119 2.88E-16 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS17020 1d44f1f961d796eaca8e0aeb05b98651 458 SUPERFAMILY SSF55931 122 456 2.16E-102 T 23-04-2016 LT40_RS17020 1d44f1f961d796eaca8e0aeb05b98651 458 SMART SM01230 120 376 1.5E-95 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LT40_RS17020 1d44f1f961d796eaca8e0aeb05b98651 458 PANTHER PTHR20852 12 458 1.6E-147 T 23-04-2016 LT40_RS05245 84e0cbfb2a7c15fe722bd5fbe6e5fd54 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LT40_RS05245 84e0cbfb2a7c15fe722bd5fbe6e5fd54 260 Gene3D G3DSA:3.40.190.10 25 113 2.5E-40 T 23-04-2016 LT40_RS05245 84e0cbfb2a7c15fe722bd5fbe6e5fd54 260 Gene3D G3DSA:3.40.190.10 213 253 2.5E-40 T 23-04-2016 LT40_RS05245 84e0cbfb2a7c15fe722bd5fbe6e5fd54 260 SMART SM00062 27 254 2.1E-62 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS05245 84e0cbfb2a7c15fe722bd5fbe6e5fd54 260 SUPERFAMILY SSF53850 1 253 2.05E-63 T 23-04-2016 LT40_RS05245 84e0cbfb2a7c15fe722bd5fbe6e5fd54 260 Gene3D G3DSA:3.40.190.10 115 205 5.3E-25 T 23-04-2016 LT40_RS05245 84e0cbfb2a7c15fe722bd5fbe6e5fd54 260 PANTHER PTHR18966:SF152 19 253 1.6E-56 T 23-04-2016 LT40_RS05245 84e0cbfb2a7c15fe722bd5fbe6e5fd54 260 PANTHER PTHR18966 19 253 1.6E-56 T 23-04-2016 LT40_RS05245 84e0cbfb2a7c15fe722bd5fbe6e5fd54 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 253 1.8E-58 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS01710 57152dbc28d698edaeffb1e847ef0be7 579 SUPERFAMILY SSF143975 5 379 2.09E-122 T 23-04-2016 LT40_RS01710 57152dbc28d698edaeffb1e847ef0be7 579 PANTHER PTHR21000 8 579 6.0E-271 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS01710 57152dbc28d698edaeffb1e847ef0be7 579 Pfam PF00920 Dehydratase family 41 561 8.0E-172 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS01710 57152dbc28d698edaeffb1e847ef0be7 579 SUPERFAMILY SSF52016 380 566 1.49E-53 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS01710 57152dbc28d698edaeffb1e847ef0be7 579 PANTHER PTHR21000:SF14 8 579 6.0E-271 T 23-04-2016 LT40_RS01710 57152dbc28d698edaeffb1e847ef0be7 579 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 PANTHER PTHR10799 157 533 1.1E-78 T 23-04-2016 LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 418 1.1E-43 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 Gene3D G3DSA:3.30.70.270 265 431 4.2E-54 T 23-04-2016 LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 SUPERFAMILY SSF55073 268 425 2.51E-47 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 421 2.2E-39 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 110 6.0E-22 T 23-04-2016 IPR005330 MHYT domain LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 Pfam PF03707 Bacterial signalling protein N terminal repeat 115 171 6.4E-17 T 23-04-2016 IPR005330 MHYT domain LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 Pfam PF03707 Bacterial signalling protein N terminal repeat 182 245 3.1E-12 T 23-04-2016 IPR005330 MHYT domain LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 Gene3D G3DSA:3.20.20.450 436 682 6.9E-98 T 23-04-2016 IPR001633 EAL domain LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 SMART SM00267 252 423 1.1E-56 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 SUPERFAMILY SSF141868 439 685 1.12E-88 T 23-04-2016 IPR001633 EAL domain LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 SMART SM00052 433 679 5.1E-114 T 23-04-2016 IPR001633 EAL domain LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 PANTHER PTHR10799:SF774 157 533 1.1E-78 T 23-04-2016 LT40_RS10920 b41a2dd59f76457e52376ffb3a092387 696 Pfam PF00563 EAL domain 439 674 9.7E-70 T 23-04-2016 IPR001633 EAL domain LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 SUPERFAMILY SSF54980 375 420 2.01E-6 T 23-04-2016 IPR009022 Elongation factor G, III-V domain LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 PIRSF PIRSF006809 5 423 1.3E-142 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 Pfam PF01926 50S ribosome-binding GTPase 201 319 1.4E-20 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 2.3E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 2.3E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 2.3E-9 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 1.0E-28 T 23-04-2016 IPR032305 GTP-binding protein, middle domain LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 Pfam PF13167 GTP-binding GTPase N-terminal 28 113 9.5E-30 T 23-04-2016 IPR025121 GTPase HflX, N-terminal LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 Hamap MF_00900 GTPase HflX [hflX]. 28 391 45.737 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 361 2.6E-153 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 SUPERFAMILY SSF52540 198 367 5.91E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 PANTHER PTHR10229:SF0 2 433 1.0E-170 T 23-04-2016 LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 Gene3D G3DSA:3.40.50.300 198 363 8.5E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13805 8610ed0eda55f36a04c3eab60ac39c1d 433 PANTHER PTHR10229 2 433 1.0E-170 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 LT40_RS01765 a2b22866e62aab2757c626764916fda8 240 PANTHER PTHR26402:SF516 15 236 3.1E-141 T 23-04-2016 LT40_RS01765 a2b22866e62aab2757c626764916fda8 240 PANTHER PTHR26402 15 236 3.1E-141 T 23-04-2016 LT40_RS01765 a2b22866e62aab2757c626764916fda8 240 Gene3D G3DSA:1.10.10.10 139 238 7.2E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01765 a2b22866e62aab2757c626764916fda8 240 SMART SM00448 15 125 2.0E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS01765 a2b22866e62aab2757c626764916fda8 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 236 8.8E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS01765 a2b22866e62aab2757c626764916fda8 240 SMART SM00862 160 236 2.4E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS01765 a2b22866e62aab2757c626764916fda8 240 Pfam PF00072 Response regulator receiver domain 18 125 8.2E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS01765 a2b22866e62aab2757c626764916fda8 240 Gene3D G3DSA:3.40.50.2300 16 133 8.2E-36 T 23-04-2016 LT40_RS01765 a2b22866e62aab2757c626764916fda8 240 SUPERFAMILY SSF52172 16 194 6.12E-39 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS03845 37d2891697c76e40486c5a19bb76942a 79 PIRSF PIRSF003113 1 79 6.3E-15 T 23-04-2016 IPR002634 BolA protein LT40_RS03845 37d2891697c76e40486c5a19bb76942a 79 Pfam PF01722 BolA-like protein 22 70 9.6E-8 T 23-04-2016 IPR002634 BolA protein LT40_RS03845 37d2891697c76e40486c5a19bb76942a 79 Gene3D G3DSA:3.30.300.90 2 78 3.6E-18 T 23-04-2016 IPR002634 BolA protein LT40_RS03845 37d2891697c76e40486c5a19bb76942a 79 SUPERFAMILY SSF82657 3 78 6.02E-20 T 23-04-2016 IPR002634 BolA protein LT40_RS19765 e17e43000e872d1e1328169a25732d6e 289 PANTHER PTHR21631 10 289 1.1E-150 T 23-04-2016 LT40_RS19765 e17e43000e872d1e1328169a25732d6e 289 Gene3D G3DSA:3.20.20.60 9 259 9.6E-62 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS19765 e17e43000e872d1e1328169a25732d6e 289 SUPERFAMILY SSF51621 9 257 4.49E-67 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS19765 e17e43000e872d1e1328169a25732d6e 289 Hamap MF_01299 Oxaloacetate decarboxylase. 4 289 44.939 T 23-04-2016 IPR023687 Oxaloacetate decarboxylase, bacterial GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 LT40_RS19765 e17e43000e872d1e1328169a25732d6e 289 Pfam PF13714 Phosphoenolpyruvate phosphomutase 13 249 3.1E-45 T 23-04-2016 LT40_RS19765 e17e43000e872d1e1328169a25732d6e 289 PANTHER PTHR21631:SF19 10 289 1.1E-150 T 23-04-2016 LT40_RS04505 62ea839a2d63f813de90b9dbab52e85e 433 PANTHER PTHR11662:SF3 17 426 1.5E-142 T 23-04-2016 LT40_RS04505 62ea839a2d63f813de90b9dbab52e85e 433 Pfam PF07690 Major Facilitator Superfamily 29 277 3.9E-37 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS04505 62ea839a2d63f813de90b9dbab52e85e 433 SUPERFAMILY SSF103473 15 426 7.06E-81 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04505 62ea839a2d63f813de90b9dbab52e85e 433 PANTHER PTHR11662 17 426 1.5E-142 T 23-04-2016 LT40_RS04505 62ea839a2d63f813de90b9dbab52e85e 433 Gene3D G3DSA:1.20.1250.20 18 222 8.7E-42 T 23-04-2016 LT40_RS04505 62ea839a2d63f813de90b9dbab52e85e 433 Gene3D G3DSA:1.20.1250.20 241 425 2.9E-21 T 23-04-2016 LT40_RS02185 38ac660e82d64865db2244359a5e1b73 300 Gene3D G3DSA:3.40.190.10 188 263 7.3E-11 T 23-04-2016 LT40_RS02185 38ac660e82d64865db2244359a5e1b73 300 Gene3D G3DSA:3.40.190.10 93 187 8.3E-13 T 23-04-2016 LT40_RS02185 38ac660e82d64865db2244359a5e1b73 300 SUPERFAMILY SSF53850 92 291 4.89E-28 T 23-04-2016 LT40_RS02185 38ac660e82d64865db2244359a5e1b73 300 PANTHER PTHR30427 1 297 1.4E-55 T 23-04-2016 LT40_RS02185 38ac660e82d64865db2244359a5e1b73 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 1.0E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS02185 38ac660e82d64865db2244359a5e1b73 300 Pfam PF03466 LysR substrate binding domain 91 290 5.0E-27 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS02185 38ac660e82d64865db2244359a5e1b73 300 Gene3D G3DSA:1.10.10.10 1 86 1.9E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02185 38ac660e82d64865db2244359a5e1b73 300 SUPERFAMILY SSF46785 1 110 1.81E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11100 fb2391464e4e71ebff6879155dfd8f85 462 PANTHER PTHR23508 12 451 5.1E-248 T 23-04-2016 LT40_RS11100 fb2391464e4e71ebff6879155dfd8f85 462 Gene3D G3DSA:1.20.1250.20 248 424 8.8E-16 T 23-04-2016 LT40_RS11100 fb2391464e4e71ebff6879155dfd8f85 462 Gene3D G3DSA:1.20.1250.20 20 216 4.6E-19 T 23-04-2016 LT40_RS11100 fb2391464e4e71ebff6879155dfd8f85 462 SUPERFAMILY SSF103473 15 432 1.44E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS11100 fb2391464e4e71ebff6879155dfd8f85 462 Pfam PF00083 Sugar (and other) transporter 23 423 3.6E-24 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS11100 fb2391464e4e71ebff6879155dfd8f85 462 PANTHER PTHR23508:SF19 12 451 5.1E-248 T 23-04-2016 LT40_RS11100 fb2391464e4e71ebff6879155dfd8f85 462 ProSitePatterns PS00216 Sugar transport proteins signature 1. 300 317 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS03835 2ea601f3b4dcb07c0d43e0f1cf727c46 217 PANTHER PTHR36573 1 212 9.8E-57 T 23-04-2016 LT40_RS03835 2ea601f3b4dcb07c0d43e0f1cf727c46 217 Pfam PF05494 MlaC protein 35 197 1.7E-39 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC LT40_RS03835 2ea601f3b4dcb07c0d43e0f1cf727c46 217 Gene3D G3DSA:3.10.450.50 27 71 6.8E-22 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS03835 2ea601f3b4dcb07c0d43e0f1cf727c46 217 Gene3D G3DSA:3.10.450.50 116 169 6.8E-22 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS03835 2ea601f3b4dcb07c0d43e0f1cf727c46 217 Gene3D G3DSA:1.10.10.640 170 206 4.8E-18 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical LT40_RS03835 2ea601f3b4dcb07c0d43e0f1cf727c46 217 Gene3D G3DSA:1.10.10.640 72 113 4.8E-18 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical LT40_RS03835 2ea601f3b4dcb07c0d43e0f1cf727c46 217 PIRSF PIRSF004649 1 211 6.7E-58 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC LT40_RS01565 1920e1808d3d2b845f81592eac9b19d3 203 Pfam PF01810 LysE type translocator 17 190 6.9E-19 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS01565 1920e1808d3d2b845f81592eac9b19d3 203 PANTHER PTHR30086 1 192 1.1E-81 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS01565 1920e1808d3d2b845f81592eac9b19d3 203 PANTHER PTHR30086:SF12 1 192 1.1E-81 T 23-04-2016 LT40_RS04735 f0c8719c652a1984bdc3df8fe82f51a3 507 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 486 3.1E-51 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LT40_RS04735 f0c8719c652a1984bdc3df8fe82f51a3 507 PIRSF PIRSF001394 1 506 1.3E-224 T 23-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS04735 f0c8719c652a1984bdc3df8fe82f51a3 507 SUPERFAMILY SSF117457 318 487 4.45E-64 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LT40_RS04735 f0c8719c652a1984bdc3df8fe82f51a3 507 PANTHER PTHR30389:SF1 1 507 0.0 T 23-04-2016 LT40_RS04735 f0c8719c652a1984bdc3df8fe82f51a3 507 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 3.6E-100 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 LT40_RS04735 f0c8719c652a1984bdc3df8fe82f51a3 507 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 286 9.3E-65 T 23-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 LT40_RS04735 f0c8719c652a1984bdc3df8fe82f51a3 507 Gene3D G3DSA:3.20.130.10 305 487 1.5E-74 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LT40_RS04735 f0c8719c652a1984bdc3df8fe82f51a3 507 Pfam PF05683 Fumarase C-terminus 289 488 1.3E-80 T 23-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 LT40_RS04735 f0c8719c652a1984bdc3df8fe82f51a3 507 PANTHER PTHR30389 1 507 0.0 T 23-04-2016 LT40_RS12200 cfd93666dfb20a2f52199e92afc3e61d 386 Pfam PF01757 Acyltransferase family 7 318 2.9E-14 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LT40_RS12200 cfd93666dfb20a2f52199e92afc3e61d 386 PANTHER PTHR23028 335 372 2.3E-33 T 23-04-2016 LT40_RS12200 cfd93666dfb20a2f52199e92afc3e61d 386 PANTHER PTHR23028 7 305 2.3E-33 T 23-04-2016 LT40_RS19820 342a66132ed07e42bbd54a98646e0360 211 SUPERFAMILY SSF89392 23 206 2.82E-52 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX LT40_RS19820 342a66132ed07e42bbd54a98646e0360 211 Pfam PF03550 Outer membrane lipoprotein LolB 54 204 2.0E-49 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 LT40_RS19820 342a66132ed07e42bbd54a98646e0360 211 PANTHER PTHR30634:SF11 1 210 8.5E-50 T 23-04-2016 LT40_RS19820 342a66132ed07e42bbd54a98646e0360 211 PANTHER PTHR30634 1 210 8.5E-50 T 23-04-2016 LT40_RS19820 342a66132ed07e42bbd54a98646e0360 211 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 10 206 2.3E-77 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 LT40_RS19820 342a66132ed07e42bbd54a98646e0360 211 Gene3D G3DSA:2.50.20.10 17 206 1.0E-62 T 23-04-2016 LT40_RS19820 342a66132ed07e42bbd54a98646e0360 211 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 7 206 25.901 T 23-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 LT40_RS15395 59d8daa813e8492344ae29b7e1e503b3 480 Gene3D G3DSA:3.40.309.10 268 451 2.4E-68 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS15395 59d8daa813e8492344ae29b7e1e503b3 480 Pfam PF00171 Aldehyde dehydrogenase family 19 475 3.1E-172 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS15395 59d8daa813e8492344ae29b7e1e503b3 480 Gene3D G3DSA:3.40.605.10 10 267 2.3E-105 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS15395 59d8daa813e8492344ae29b7e1e503b3 480 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS15395 59d8daa813e8492344ae29b7e1e503b3 480 PANTHER PTHR11699:SF49 1 479 8.8E-302 T 23-04-2016 LT40_RS15395 59d8daa813e8492344ae29b7e1e503b3 480 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS15395 59d8daa813e8492344ae29b7e1e503b3 480 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 474 1.2E-233 T 23-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 LT40_RS15395 59d8daa813e8492344ae29b7e1e503b3 480 SUPERFAMILY SSF53720 4 479 6.68E-174 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS15395 59d8daa813e8492344ae29b7e1e503b3 480 PANTHER PTHR11699 1 479 8.8E-302 T 23-04-2016 LT40_RS10060 043a0c8cf0d6797d00f193b4162cae3d 383 PANTHER PTHR23514 14 382 5.3E-120 T 23-04-2016 LT40_RS10060 043a0c8cf0d6797d00f193b4162cae3d 383 SUPERFAMILY SSF103473 21 378 3.27E-33 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS10060 043a0c8cf0d6797d00f193b4162cae3d 383 Gene3D G3DSA:1.20.1250.20 210 374 4.7E-10 T 23-04-2016 LT40_RS10060 043a0c8cf0d6797d00f193b4162cae3d 383 Pfam PF07690 Major Facilitator Superfamily 22 240 9.8E-10 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS10060 043a0c8cf0d6797d00f193b4162cae3d 383 PANTHER PTHR23514:SF13 14 382 5.3E-120 T 23-04-2016 LT40_RS10060 043a0c8cf0d6797d00f193b4162cae3d 383 Gene3D G3DSA:1.20.1250.20 22 184 8.8E-16 T 23-04-2016 LT40_RS20275 3780febe020e60a99563dd239f355169 103 PANTHER PTHR13799:SF18 2 102 2.9E-48 T 23-04-2016 LT40_RS20275 3780febe020e60a99563dd239f355169 103 PANTHER PTHR13799 2 102 2.9E-48 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LT40_RS20275 3780febe020e60a99563dd239f355169 103 SUPERFAMILY SSF102705 2 101 2.0E-23 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LT40_RS20275 3780febe020e60a99563dd239f355169 103 Gene3D G3DSA:3.30.70.830 2 102 2.4E-42 T 23-04-2016 LT40_RS12790 953ee748722f0802aabc7cc79cd9d6f4 391 PANTHER PTHR11751 14 391 3.7E-191 T 23-04-2016 LT40_RS12790 953ee748722f0802aabc7cc79cd9d6f4 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 LT40_RS12790 953ee748722f0802aabc7cc79cd9d6f4 391 Gene3D G3DSA:3.90.1150.10 254 386 8.9E-34 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS12790 953ee748722f0802aabc7cc79cd9d6f4 391 Gene3D G3DSA:3.40.640.10 49 253 6.9E-56 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS12790 953ee748722f0802aabc7cc79cd9d6f4 391 SUPERFAMILY SSF53383 5 387 1.77E-95 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS12790 953ee748722f0802aabc7cc79cd9d6f4 391 Pfam PF00155 Aminotransferase class I and II 33 381 2.4E-52 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS12790 953ee748722f0802aabc7cc79cd9d6f4 391 PANTHER PTHR11751:SF401 14 391 3.7E-191 T 23-04-2016 LT40_RS10800 d3d27b4baa2786d352d617b06d56f1a7 339 Gene3D G3DSA:1.20.970.10 22 83 3.9E-19 T 23-04-2016 LT40_RS10800 d3d27b4baa2786d352d617b06d56f1a7 339 SUPERFAMILY SSF52418 89 330 1.0E-50 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LT40_RS10800 d3d27b4baa2786d352d617b06d56f1a7 339 PANTHER PTHR10515 7 279 1.1E-40 T 23-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 LT40_RS10800 d3d27b4baa2786d352d617b06d56f1a7 339 Pfam PF02885 Glycosyl transferase family, helical bundle domain 28 82 5.5E-17 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LT40_RS10800 d3d27b4baa2786d352d617b06d56f1a7 339 SUPERFAMILY SSF47648 23 84 2.22E-16 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain LT40_RS10800 d3d27b4baa2786d352d617b06d56f1a7 339 Gene3D G3DSA:3.40.1030.10 92 332 1.5E-31 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 259 284 3.5E-47 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 237 259 3.5E-47 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 42 54 3.5E-47 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 3.5E-47 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 113 140 3.5E-47 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 91 113 3.5E-47 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 SUPERFAMILY SSF53328 91 284 5.89E-59 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 Gene3D G3DSA:3.30.70.260 6 84 2.2E-12 T 23-04-2016 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 PANTHER PTHR10520 6 279 1.9E-141 T 23-04-2016 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 Gene3D G3DSA:3.40.50.170 90 281 1.7E-52 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 Pfam PF00551 Formyl transferase 91 266 5.9E-36 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 PANTHER PTHR10520:SF7 6 279 1.9E-141 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 PIRSF PIRSF036480 5 285 7.3E-99 T 23-04-2016 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 285 43.871 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 285 2.0E-88 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 LT40_RS14150 923c54fc7128637f2de759f62f2d0aaf 285 SUPERFAMILY SSF55021 7 83 1.01E-8 T 23-04-2016 LT40_RS11095 c8698a43465363cddc1f4912cb6a6216 471 PANTHER PTHR11751:SF314 87 469 5.0E-175 T 23-04-2016 LT40_RS11095 c8698a43465363cddc1f4912cb6a6216 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.0E-11 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS11095 c8698a43465363cddc1f4912cb6a6216 471 Gene3D G3DSA:3.90.1150.10 351 466 6.9E-9 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS11095 c8698a43465363cddc1f4912cb6a6216 471 Pfam PF00155 Aminotransferase class I and II 147 456 9.3E-32 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS11095 c8698a43465363cddc1f4912cb6a6216 471 PANTHER PTHR11751 87 469 5.0E-175 T 23-04-2016 LT40_RS11095 c8698a43465363cddc1f4912cb6a6216 471 SUPERFAMILY SSF46785 2 74 2.36E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11095 c8698a43465363cddc1f4912cb6a6216 471 SUPERFAMILY SSF53383 98 468 3.13E-93 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS11095 c8698a43465363cddc1f4912cb6a6216 471 Gene3D G3DSA:1.10.10.10 1 67 7.9E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11095 c8698a43465363cddc1f4912cb6a6216 471 SMART SM00345 7 66 5.6E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS11095 c8698a43465363cddc1f4912cb6a6216 471 Gene3D G3DSA:3.40.640.10 147 350 5.3E-70 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS09430 0f64260cc184ee6204fbcc7b23b2ead2 439 SUPERFAMILY SSF53850 28 410 1.35E-79 T 23-04-2016 LT40_RS09430 0f64260cc184ee6204fbcc7b23b2ead2 439 Gene3D G3DSA:3.40.190.10 143 356 2.1E-52 T 23-04-2016 LT40_RS09430 0f64260cc184ee6204fbcc7b23b2ead2 439 Pfam PF01547 Bacterial extracellular solute-binding protein 43 332 7.1E-52 T 23-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 LT40_RS09430 0f64260cc184ee6204fbcc7b23b2ead2 439 PANTHER PTHR30061 1 436 6.7E-139 T 23-04-2016 LT40_RS09430 0f64260cc184ee6204fbcc7b23b2ead2 439 PANTHER PTHR30061:SF3 1 436 6.7E-139 T 23-04-2016 LT40_RS09430 0f64260cc184ee6204fbcc7b23b2ead2 439 Gene3D G3DSA:3.40.190.10 28 92 2.6E-4 T 23-04-2016 LT40_RS00270 4d93cfc33675ce557828260cb9b069f6 407 PANTHER PTHR32027:SF0 1 398 7.7E-106 T 23-04-2016 LT40_RS00270 4d93cfc33675ce557828260cb9b069f6 407 Gene3D G3DSA:3.20.20.140 57 355 2.4E-89 T 23-04-2016 LT40_RS00270 4d93cfc33675ce557828260cb9b069f6 407 SUPERFAMILY SSF51556 51 367 7.66E-74 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS00270 4d93cfc33675ce557828260cb9b069f6 407 SUPERFAMILY SSF51338 358 406 1.67E-8 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS00270 4d93cfc33675ce557828260cb9b069f6 407 SUPERFAMILY SSF51338 19 51 1.67E-8 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS00270 4d93cfc33675ce557828260cb9b069f6 407 Gene3D G3DSA:2.30.40.10 36 56 9.6E-6 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS00270 4d93cfc33675ce557828260cb9b069f6 407 PANTHER PTHR32027 1 398 7.7E-106 T 23-04-2016 LT40_RS00270 4d93cfc33675ce557828260cb9b069f6 407 Pfam PF07969 Amidohydrolase family 39 105 1.2E-7 T 23-04-2016 IPR013108 Amidohydrolase 3 LT40_RS00270 4d93cfc33675ce557828260cb9b069f6 407 Pfam PF07969 Amidohydrolase family 149 380 1.7E-15 T 23-04-2016 IPR013108 Amidohydrolase 3 LT40_RS08870 ee63b69d6931defd84a8d04225bcd51d 474 Pfam PF13520 Amino acid permease 9 398 1.9E-40 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS08870 ee63b69d6931defd84a8d04225bcd51d 474 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 5 429 3.2E-197 T 23-04-2016 IPR027566 Putrescine-ornithine antiporter GO:0015496|GO:0015822|GO:0015847 LT40_RS08870 ee63b69d6931defd84a8d04225bcd51d 474 PANTHER PTHR11785 4 457 2.8E-160 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS08870 ee63b69d6931defd84a8d04225bcd51d 474 PIRSF PIRSF006060 3 446 1.4E-43 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS08870 ee63b69d6931defd84a8d04225bcd51d 474 PANTHER PTHR11785:SF341 4 457 2.8E-160 T 23-04-2016 LT40_RS16345 d164a962d8bfbfab5d60fd8014b3f267 133 Gene3D G3DSA:3.10.129.10 7 131 9.2E-34 T 23-04-2016 IPR029069 HotDog domain LT40_RS16345 d164a962d8bfbfab5d60fd8014b3f267 133 Pfam PF03061 Thioesterase superfamily 29 103 2.7E-16 T 23-04-2016 IPR006683 Thioesterase domain LT40_RS16345 d164a962d8bfbfab5d60fd8014b3f267 133 PANTHER PTHR11049:SF5 3 133 7.9E-62 T 23-04-2016 LT40_RS16345 d164a962d8bfbfab5d60fd8014b3f267 133 SUPERFAMILY SSF54637 9 131 2.03E-32 T 23-04-2016 IPR029069 HotDog domain LT40_RS16345 d164a962d8bfbfab5d60fd8014b3f267 133 PANTHER PTHR11049 3 133 7.9E-62 T 23-04-2016 LT40_RS01890 02931cc789b73ac688e6ceaa0c3fb1b6 180 SUPERFAMILY SSF50630 27 166 1.02E-37 T 23-04-2016 IPR021109 Aspartic peptidase domain LT40_RS01890 02931cc789b73ac688e6ceaa0c3fb1b6 180 Pfam PF05618 Putative ATP-dependant zinc protease 27 169 9.7E-45 T 23-04-2016 LT40_RS01890 02931cc789b73ac688e6ceaa0c3fb1b6 180 PANTHER PTHR38037 1 180 9.1E-48 T 23-04-2016 LT40_RS01890 02931cc789b73ac688e6ceaa0c3fb1b6 180 Gene3D G3DSA:2.40.70.10 23 161 1.9E-42 T 23-04-2016 IPR021109 Aspartic peptidase domain LT40_RS02595 16fae832853b55e66b21b01964647232 147 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 141 33.505 T 23-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LT40_RS02595 16fae832853b55e66b21b01964647232 147 PANTHER PTHR34128 3 142 9.3E-67 T 23-04-2016 LT40_RS02595 16fae832853b55e66b21b01964647232 147 PANTHER PTHR34128:SF1 3 142 9.3E-67 T 23-04-2016 LT40_RS02595 16fae832853b55e66b21b01964647232 147 Pfam PF03100 CcmE 5 131 1.6E-46 T 23-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LT40_RS02595 16fae832853b55e66b21b01964647232 147 Gene3D G3DSA:2.40.50.140 27 125 6.1E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS02595 16fae832853b55e66b21b01964647232 147 SUPERFAMILY SSF82093 30 137 1.31E-41 T 23-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 Pfam PF00005 ABC transporter 19 182 1.6E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 Pfam PF00005 ABC transporter 334 467 3.1E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 Gene3D G3DSA:3.40.50.300 319 543 2.3E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 SUPERFAMILY SSF52540 308 523 1.2E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 Gene3D G3DSA:3.40.50.300 2 267 3.8E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 SUPERFAMILY SSF52540 4 235 5.77E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 PANTHER PTHR19211 1 578 4.8E-230 T 23-04-2016 LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 Pfam PF12848 ABC transporter 221 296 1.1E-7 T 23-04-2016 IPR032781 ABC-transporter extension domain LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 SMART SM00382 28 227 5.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 SMART SM00382 342 512 6.8E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 PANTHER PTHR19211:SF45 1 578 4.8E-230 T 23-04-2016 LT40_RS07260 4784a20eaf4c2bfcde0c8132f237a9e5 637 Pfam PF16326 ABC transporter C-terminal domain 568 636 8.8E-21 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 LT40_RS17270 193d07f0b59c5b26bcafc6f818404fc5 291 SUPERFAMILY SSF53448 2 287 2.62E-93 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS17270 193d07f0b59c5b26bcafc6f818404fc5 291 PANTHER PTHR22572:SF105 3 268 4.7E-175 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LT40_RS17270 193d07f0b59c5b26bcafc6f818404fc5 291 PANTHER PTHR22572 3 268 4.7E-175 T 23-04-2016 LT40_RS17270 193d07f0b59c5b26bcafc6f818404fc5 291 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 3 287 5.0E-154 T 23-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LT40_RS17270 193d07f0b59c5b26bcafc6f818404fc5 291 Gene3D G3DSA:3.90.550.10 1 267 2.3E-72 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS17270 193d07f0b59c5b26bcafc6f818404fc5 291 Pfam PF00483 Nucleotidyl transferase 3 238 2.6E-68 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 Gene3D G3DSA:3.40.50.620 225 384 3.7E-78 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 Gene3D G3DSA:3.40.50.620 437 585 3.7E-78 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 PANTHER PTHR11772 433 553 1.0E-194 T 23-04-2016 LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 PANTHER PTHR11772 2 390 1.0E-194 T 23-04-2016 LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 520 4.1E-120 T 23-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 PANTHER PTHR11772:SF10 433 553 1.0E-194 T 23-04-2016 LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 PANTHER PTHR11772:SF10 2 390 1.0E-194 T 23-04-2016 LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 SUPERFAMILY SSF56235 1 223 4.29E-57 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 Pfam PF13537 Glutamine amidotransferase domain 47 166 2.4E-42 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 PIRSF PIRSF001589 1 590 1.3E-201 T 23-04-2016 LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 Pfam PF00733 Asparagine synthase 246 585 1.1E-81 T 23-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 SUPERFAMILY SSF52402 442 566 2.07E-69 T 23-04-2016 LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 SUPERFAMILY SSF52402 234 388 2.07E-69 T 23-04-2016 LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 TIGRFAM TIGR03104 trio_amidotrans: asparagine synthase family amidotransferase 1 587 1.3E-291 T 23-04-2016 IPR017535 Asparagine synthase family amidotransferase LT40_RS05220 a1f366f22ab12ac5c7826b8a471d2488 590 Gene3D G3DSA:3.60.20.10 1 224 2.4E-65 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS11660 fc12ca39084908854287dea5f4d4dd93 161 Gene3D G3DSA:2.30.110.10 2 153 3.4E-49 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS11660 fc12ca39084908854287dea5f4d4dd93 161 PANTHER PTHR30466 2 161 1.8E-35 T 23-04-2016 LT40_RS11660 fc12ca39084908854287dea5f4d4dd93 161 SMART SM00903 11 156 1.8E-51 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LT40_RS11660 fc12ca39084908854287dea5f4d4dd93 161 Pfam PF01613 Flavin reductase like domain 11 155 4.2E-36 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LT40_RS11660 fc12ca39084908854287dea5f4d4dd93 161 SUPERFAMILY SSF50475 2 156 2.75E-44 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS17590 c7fcc22b6f314a54042c9fb6bd939737 422 Gene3D G3DSA:1.20.1250.20 36 215 1.1E-33 T 23-04-2016 LT40_RS17590 c7fcc22b6f314a54042c9fb6bd939737 422 Gene3D G3DSA:1.20.1250.20 243 412 9.8E-15 T 23-04-2016 LT40_RS17590 c7fcc22b6f314a54042c9fb6bd939737 422 PANTHER PTHR23501 9 415 5.2E-192 T 23-04-2016 LT40_RS17590 c7fcc22b6f314a54042c9fb6bd939737 422 SUPERFAMILY SSF103473 29 413 1.01E-65 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS17590 c7fcc22b6f314a54042c9fb6bd939737 422 Pfam PF07690 Major Facilitator Superfamily 41 289 4.7E-30 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS17590 c7fcc22b6f314a54042c9fb6bd939737 422 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS17590 c7fcc22b6f314a54042c9fb6bd939737 422 PANTHER PTHR23501:SF11 9 415 5.2E-192 T 23-04-2016 LT40_RS10835 8454d25061d030d0e1d504cdb6b9c873 402 SUPERFAMILY SSF141868 147 393 6.02E-38 T 23-04-2016 IPR001633 EAL domain LT40_RS10835 8454d25061d030d0e1d504cdb6b9c873 402 PANTHER PTHR33121 147 401 4.7E-19 T 23-04-2016 LT40_RS10835 8454d25061d030d0e1d504cdb6b9c873 402 Gene3D G3DSA:3.20.20.450 147 392 6.6E-38 T 23-04-2016 IPR001633 EAL domain LT40_RS10835 8454d25061d030d0e1d504cdb6b9c873 402 PANTHER PTHR33121:SF13 147 401 4.7E-19 T 23-04-2016 LT40_RS10835 8454d25061d030d0e1d504cdb6b9c873 402 SMART SM00052 139 385 4.5E-12 T 23-04-2016 IPR001633 EAL domain LT40_RS10835 8454d25061d030d0e1d504cdb6b9c873 402 SUPERFAMILY SSF52172 6 93 1.46E-8 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS10835 8454d25061d030d0e1d504cdb6b9c873 402 Gene3D G3DSA:3.40.50.2300 6 93 4.5E-8 T 23-04-2016 LT40_RS10835 8454d25061d030d0e1d504cdb6b9c873 402 Pfam PF00563 EAL domain 146 380 1.9E-35 T 23-04-2016 IPR001633 EAL domain LT40_RS13920 203d6cff54fbb869997c9713cc0b92e5 271 SUPERFAMILY SSF52821 144 270 1.57E-28 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS13920 203d6cff54fbb869997c9713cc0b92e5 271 PANTHER PTHR11364 11 271 5.9E-65 T 23-04-2016 LT40_RS13920 203d6cff54fbb869997c9713cc0b92e5 271 Gene3D G3DSA:3.40.250.10 9 135 9.0E-32 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS13920 203d6cff54fbb869997c9713cc0b92e5 271 Gene3D G3DSA:3.40.250.10 147 270 4.6E-32 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS13920 203d6cff54fbb869997c9713cc0b92e5 271 SMART SM00450 149 267 5.3E-21 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS13920 203d6cff54fbb869997c9713cc0b92e5 271 SMART SM00450 11 126 1.8E-14 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS13920 203d6cff54fbb869997c9713cc0b92e5 271 Pfam PF00581 Rhodanese-like domain 151 262 5.4E-16 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS13920 203d6cff54fbb869997c9713cc0b92e5 271 Pfam PF00581 Rhodanese-like domain 13 122 3.5E-12 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS13920 203d6cff54fbb869997c9713cc0b92e5 271 ProSitePatterns PS00683 Rhodanese C-terminal signature. 251 261 - T 23-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 LT40_RS13920 203d6cff54fbb869997c9713cc0b92e5 271 SUPERFAMILY SSF52821 8 132 1.83E-31 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS13920 203d6cff54fbb869997c9713cc0b92e5 271 PANTHER PTHR11364:SF0 11 271 5.9E-65 T 23-04-2016 LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 Gene3D G3DSA:3.30.930.10 222 324 4.3E-97 T 23-04-2016 LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 Gene3D G3DSA:3.30.930.10 4 186 4.3E-97 T 23-04-2016 LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 PANTHER PTHR11476 3 429 8.8E-222 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 424 33.226 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 Pfam PF13393 Histidyl-tRNA synthetase 10 313 1.2E-44 T 23-04-2016 LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 Pfam PF03129 Anticodon binding domain 343 421 5.2E-6 T 23-04-2016 IPR004154 Anticodon-binding LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 SUPERFAMILY SSF52954 330 424 4.42E-21 T 23-04-2016 IPR004154 Anticodon-binding LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 SUPERFAMILY SSF55681 6 321 6.97E-104 T 23-04-2016 LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 414 5.5E-154 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 PIRSF PIRSF001549 2 425 8.0E-116 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 PANTHER PTHR11476:SF9 3 429 8.8E-222 T 23-04-2016 LT40_RS03550 d60d230f34c9ee8972f8c874a71340bb 429 Gene3D G3DSA:3.40.50.800 330 424 7.2E-29 T 23-04-2016 IPR004154 Anticodon-binding LT40_RS15305 3fe087d84d77c2956778268051246f62 376 SUPERFAMILY SSF52540 35 272 6.21E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15305 3fe087d84d77c2956778268051246f62 376 PANTHER PTHR24220 36 290 1.9E-137 T 23-04-2016 LT40_RS15305 3fe087d84d77c2956778268051246f62 376 Pfam PF09383 NIL domain 300 371 2.1E-17 T 23-04-2016 IPR018449 NIL domain LT40_RS15305 3fe087d84d77c2956778268051246f62 376 Gene3D G3DSA:3.30.70.260 270 375 2.3E-21 T 23-04-2016 LT40_RS15305 3fe087d84d77c2956778268051246f62 376 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS15305 3fe087d84d77c2956778268051246f62 376 SMART SM00382 63 250 1.6E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS15305 3fe087d84d77c2956778268051246f62 376 Gene3D G3DSA:3.40.50.300 34 269 2.8E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15305 3fe087d84d77c2956778268051246f62 376 SMART SM00930 297 372 2.7E-16 T 23-04-2016 IPR018449 NIL domain LT40_RS15305 3fe087d84d77c2956778268051246f62 376 Pfam PF00005 ABC transporter 54 202 1.7E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS15305 3fe087d84d77c2956778268051246f62 376 PANTHER PTHR24220:SF186 36 290 1.9E-137 T 23-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 LT40_RS15305 3fe087d84d77c2956778268051246f62 376 SUPERFAMILY SSF55021 280 375 1.1E-15 T 23-04-2016 LT40_RS10420 98207c3a57a27cb97f185a29ec4e34e2 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 5.2E-13 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS10420 98207c3a57a27cb97f185a29ec4e34e2 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 5.2E-13 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS10420 98207c3a57a27cb97f185a29ec4e34e2 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 5.2E-13 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS10420 98207c3a57a27cb97f185a29ec4e34e2 156 SUPERFAMILY SSF46785 12 69 1.96E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10420 98207c3a57a27cb97f185a29ec4e34e2 156 SMART SM00344 12 118 1.7E-26 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LT40_RS10420 98207c3a57a27cb97f185a29ec4e34e2 156 Gene3D G3DSA:1.10.10.10 10 63 1.2E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10420 98207c3a57a27cb97f185a29ec4e34e2 156 PANTHER PTHR30154 4 148 3.5E-38 T 23-04-2016 LT40_RS10420 98207c3a57a27cb97f185a29ec4e34e2 156 Pfam PF01037 Lrp/AsnC ligand binding domain 84 148 2.2E-11 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS10420 98207c3a57a27cb97f185a29ec4e34e2 156 SUPERFAMILY SSF54909 75 153 2.01E-13 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS10420 98207c3a57a27cb97f185a29ec4e34e2 156 Gene3D G3DSA:3.30.70.920 64 149 2.3E-15 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS10420 98207c3a57a27cb97f185a29ec4e34e2 156 Pfam PF13404 AsnC-type helix-turn-helix domain 14 53 1.6E-14 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS09070 4ad320efc314870ca245d3db3919e539 264 PANTHER PTHR30413 4 264 9.8E-81 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LT40_RS09070 4ad320efc314870ca245d3db3919e539 264 Pfam PF01061 ABC-2 type transporter 17 222 2.1E-27 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 LT40_RS09070 4ad320efc314870ca245d3db3919e539 264 PANTHER PTHR30413:SF8 4 264 9.8E-81 T 23-04-2016 LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 4.0E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 Gene3D G3DSA:1.10.10.250 73 141 2.8E-28 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.9E-64 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 Gene3D G3DSA:3.30.1550.10 2 72 2.6E-38 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 23-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 SUPERFAMILY SSF46906 68 141 1.31E-22 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 SMART SM00649 9 141 8.0E-81 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 72 4.0E-16 T 23-04-2016 LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.6E-21 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 PANTHER PTHR11661 1 142 5.7E-69 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.254 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LT40_RS18300 313083968f377c5d94c0cf6f66f86d7a 143 SUPERFAMILY SSF54747 3 72 7.33E-30 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal LT40_RS00350 c090d761a4fa24ef81684901366a4750 270 Pfam PF00899 ThiF family 16 257 8.7E-41 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LT40_RS00350 c090d761a4fa24ef81684901366a4750 270 PANTHER PTHR10953 4 160 2.4E-118 T 23-04-2016 LT40_RS00350 c090d761a4fa24ef81684901366a4750 270 PANTHER PTHR10953 193 261 2.4E-118 T 23-04-2016 LT40_RS00350 c090d761a4fa24ef81684901366a4750 270 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 28 56 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LT40_RS00350 c090d761a4fa24ef81684901366a4750 270 PANTHER PTHR10953:SF159 4 160 2.4E-118 T 23-04-2016 LT40_RS00350 c090d761a4fa24ef81684901366a4750 270 PANTHER PTHR10953:SF159 193 261 2.4E-118 T 23-04-2016 LT40_RS00350 c090d761a4fa24ef81684901366a4750 270 SUPERFAMILY SSF69572 4 253 6.67E-66 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LT40_RS00350 c090d761a4fa24ef81684901366a4750 270 Gene3D G3DSA:3.40.50.720 4 262 3.2E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS13280 2e92baaeaa9716431db380812e9f81e6 306 Pfam PF01497 Periplasmic binding protein 45 273 1.4E-24 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LT40_RS13280 2e92baaeaa9716431db380812e9f81e6 306 Gene3D G3DSA:3.40.50.1980 25 144 6.3E-30 T 23-04-2016 LT40_RS13280 2e92baaeaa9716431db380812e9f81e6 306 SUPERFAMILY SSF53807 39 297 7.06E-58 T 23-04-2016 LT40_RS13280 2e92baaeaa9716431db380812e9f81e6 306 Gene3D G3DSA:3.40.50.1980 145 298 2.9E-28 T 23-04-2016 LT40_RS13280 2e92baaeaa9716431db380812e9f81e6 306 PANTHER PTHR30532 27 306 9.9E-88 T 23-04-2016 LT40_RS13280 2e92baaeaa9716431db380812e9f81e6 306 PANTHER PTHR30532:SF6 27 306 9.9E-88 T 23-04-2016 LT40_RS12760 ea4a3441207676102ac3d80345805b10 109 PIRSF PIRSF006257 3 109 2.4E-39 T 23-04-2016 IPR007384 Protein of unknown function UCP006257 LT40_RS12760 ea4a3441207676102ac3d80345805b10 109 Pfam PF04287 tRNA pseudouridine synthase C 8 104 5.4E-34 T 23-04-2016 IPR023376 YqcC-like domain LT40_RS12760 ea4a3441207676102ac3d80345805b10 109 SUPERFAMILY SSF158452 7 106 5.89E-36 T 23-04-2016 IPR023376 YqcC-like domain LT40_RS12760 ea4a3441207676102ac3d80345805b10 109 Gene3D G3DSA:1.20.1440.40 8 105 4.5E-35 T 23-04-2016 IPR023376 YqcC-like domain LT40_RS12760 ea4a3441207676102ac3d80345805b10 109 PANTHER PTHR39586 3 109 1.9E-33 T 23-04-2016 LT40_RS15450 7eae24c1f424ad3d63a690dbca65767f 331 PANTHER PTHR11695:SF558 15 329 3.3E-129 T 23-04-2016 LT40_RS15450 7eae24c1f424ad3d63a690dbca65767f 331 SUPERFAMILY SSF50129 1 140 1.17E-32 T 23-04-2016 IPR011032 GroES-like LT40_RS15450 7eae24c1f424ad3d63a690dbca65767f 331 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 331 8.9E-163 T 23-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 LT40_RS15450 7eae24c1f424ad3d63a690dbca65767f 331 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 144 165 - T 23-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 LT40_RS15450 7eae24c1f424ad3d63a690dbca65767f 331 SUPERFAMILY SSF51735 112 281 2.71E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15450 7eae24c1f424ad3d63a690dbca65767f 331 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 4.0E-8 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LT40_RS15450 7eae24c1f424ad3d63a690dbca65767f 331 Gene3D G3DSA:3.40.50.720 153 241 3.0E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15450 7eae24c1f424ad3d63a690dbca65767f 331 SMART SM00829 10 328 1.1E-10 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LT40_RS15450 7eae24c1f424ad3d63a690dbca65767f 331 Gene3D G3DSA:3.90.180.10 1 152 1.4E-37 T 23-04-2016 IPR011032 GroES-like LT40_RS15450 7eae24c1f424ad3d63a690dbca65767f 331 Pfam PF13602 Zinc-binding dehydrogenase 188 328 6.2E-25 T 23-04-2016 LT40_RS15450 7eae24c1f424ad3d63a690dbca65767f 331 PANTHER PTHR11695 15 329 3.3E-129 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS10725 852ad21a8877a756072bfaebc534fa9a 410 Gene3D G3DSA:3.40.50.970 9 407 1.2E-124 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS10725 852ad21a8877a756072bfaebc534fa9a 410 PANTHER PTHR11516:SF31 1 408 8.5E-264 T 23-04-2016 LT40_RS10725 852ad21a8877a756072bfaebc534fa9a 410 PANTHER PTHR11516 1 408 8.5E-264 T 23-04-2016 LT40_RS10725 852ad21a8877a756072bfaebc534fa9a 410 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 6 44 8.5E-21 T 23-04-2016 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 LT40_RS10725 852ad21a8877a756072bfaebc534fa9a 410 Pfam PF00676 Dehydrogenase E1 component 82 374 4.5E-96 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 LT40_RS10725 852ad21a8877a756072bfaebc534fa9a 410 SUPERFAMILY SSF52518 49 407 2.68E-92 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS04500 a4da0c63b457a4cca3f54f00d8f6c98d 282 PANTHER PTHR11624:SF86 9 278 1.2E-69 T 23-04-2016 LT40_RS04500 a4da0c63b457a4cca3f54f00d8f6c98d 282 SUPERFAMILY SSF52518 13 275 2.13E-77 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS04500 a4da0c63b457a4cca3f54f00d8f6c98d 282 PANTHER PTHR11624 9 278 1.2E-69 T 23-04-2016 IPR033247 Transketolase family LT40_RS04500 a4da0c63b457a4cca3f54f00d8f6c98d 282 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 20 268 3.8E-41 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LT40_RS04500 a4da0c63b457a4cca3f54f00d8f6c98d 282 Gene3D G3DSA:3.40.50.970 11 277 1.7E-83 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS19385 84bc7d06280bf3a42605133b2af205b6 162 PANTHER PTHR38596:SF1 1 162 2.4E-93 T 23-04-2016 LT40_RS19385 84bc7d06280bf3a42605133b2af205b6 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 161 7.7E-71 T 23-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria LT40_RS19385 84bc7d06280bf3a42605133b2af205b6 162 PANTHER PTHR38596 1 162 2.4E-93 T 23-04-2016 LT40_RS19385 84bc7d06280bf3a42605133b2af205b6 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 4.9E-34 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 LT40_RS19385 84bc7d06280bf3a42605133b2af205b6 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 90.529 T 23-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 LT40_RS16485 a73e23fc2734a32831f892ef7c3ceea4 87 Gene3D G3DSA:3.90.940.10 1 68 1.5E-17 T 23-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS16485 a73e23fc2734a32831f892ef7c3ceea4 87 SUPERFAMILY SSF63562 1 80 1.6E-26 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS16485 a73e23fc2734a32831f892ef7c3ceea4 87 PANTHER PTHR34476 2 87 1.0E-26 T 23-04-2016 LT40_RS16485 a73e23fc2734a32831f892ef7c3ceea4 87 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 8.2E-23 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS16485 a73e23fc2734a32831f892ef7c3ceea4 87 Pfam PF01192 RNA polymerase Rpb6 8 61 5.3E-18 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS16485 a73e23fc2734a32831f892ef7c3ceea4 87 SMART SM01409 8 61 4.7E-19 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS16485 a73e23fc2734a32831f892ef7c3ceea4 87 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 17.713 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LT40_RS04905 13e9af8e392536c692690409fd9fb5d8 143 PIRSF PIRSF000714 1 136 2.8E-49 T 23-04-2016 IPR026026 Histidine triad hydrolase, Hint-type LT40_RS04905 13e9af8e392536c692690409fd9fb5d8 143 Gene3D G3DSA:3.30.428.10 4 133 6.5E-35 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 LT40_RS04905 13e9af8e392536c692690409fd9fb5d8 143 PANTHER PTHR23089:SF13 22 128 4.5E-16 T 23-04-2016 LT40_RS04905 13e9af8e392536c692690409fd9fb5d8 143 SUPERFAMILY SSF54197 2 133 1.07E-34 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 LT40_RS04905 13e9af8e392536c692690409fd9fb5d8 143 Pfam PF01230 HIT domain 10 98 3.8E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein LT40_RS04905 13e9af8e392536c692690409fd9fb5d8 143 PANTHER PTHR23089 22 128 4.5E-16 T 23-04-2016 IPR001310 Histidine triad (HIT) protein LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 487 86.21 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 485 1.7E-175 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 174 180 - T 23-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 Gene3D G3DSA:3.40.50.720 7 183 1.5E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 Gene3D G3DSA:3.30.360.10 184 485 5.0E-123 T 23-04-2016 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 SUPERFAMILY SSF51735 5 187 3.74E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 184 3.6E-52 T 23-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 PANTHER PTHR23429 5 488 4.3E-216 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 PANTHER PTHR23429:SF0 5 488 4.3E-216 T 23-04-2016 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 187 485 1.9E-116 T 23-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 PIRSF PIRSF000110 1 488 6.2E-171 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 325 351 6.4E-49 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 164 192 6.4E-49 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 216 233 6.4E-49 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 140 153 6.4E-49 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 234 250 6.4E-49 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 LT40_RS03260 77397e5530360c96dbeccbd7b2c60a40 489 SUPERFAMILY SSF55347 179 486 1.28E-114 T 23-04-2016 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 391 493 7.9E-9 T 23-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 362 372 - T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 PANTHER PTHR11985:SF1 12 497 5.3E-179 T 23-04-2016 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 PANTHER PTHR11985 12 497 5.3E-179 T 23-04-2016 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 Gene3D G3DSA:3.50.50.60 14 251 9.1E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 44 56 1.7E-28 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 15 27 1.7E-28 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 28 38 1.7E-28 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 323 329 1.7E-28 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 357 369 1.7E-28 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 89 101 1.7E-28 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 Pfam PF01266 FAD dependent oxidoreductase 16 368 9.2E-49 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS05535 8abd7957d0e517516f16fb3da131a7cb 512 SUPERFAMILY SSF51905 14 306 1.04E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS20785 a216cabd302ca1b290b9e6d04e1c02b0 359 PANTHER PTHR15032:SF4 64 351 1.2E-112 T 23-04-2016 LT40_RS20785 a216cabd302ca1b290b9e6d04e1c02b0 359 SUPERFAMILY SSF56281 189 338 1.25E-37 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS20785 a216cabd302ca1b290b9e6d04e1c02b0 359 SUPERFAMILY SSF56281 87 162 1.25E-37 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS20785 a216cabd302ca1b290b9e6d04e1c02b0 359 PANTHER PTHR15032 64 351 1.2E-112 T 23-04-2016 LT40_RS20785 a216cabd302ca1b290b9e6d04e1c02b0 359 Gene3D G3DSA:3.60.15.10 56 348 2.6E-101 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS20785 a216cabd302ca1b290b9e6d04e1c02b0 359 Pfam PF12706 Beta-lactamase superfamily domain 105 297 3.3E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS10580 a82c1e30bf87d14357267f06dc31fb5e 322 Gene3D G3DSA:3.50.14.10 232 239 3.8E-7 T 23-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LT40_RS10580 a82c1e30bf87d14357267f06dc31fb5e 322 Gene3D G3DSA:3.50.14.10 15 166 3.8E-7 T 23-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LT40_RS10580 a82c1e30bf87d14357267f06dc31fb5e 322 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 15 281 1.6E-10 T 23-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LT40_RS10580 a82c1e30bf87d14357267f06dc31fb5e 322 SUPERFAMILY SSF56596 52 282 2.35E-10 T 23-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 LT40_RS14390 8dcf850ad88b461cc816e5ad6e488556 273 Gene3D G3DSA:3.40.50.300 3 267 3.6E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14390 8dcf850ad88b461cc816e5ad6e488556 273 SUPERFAMILY SSF52540 39 269 1.0E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14390 8dcf850ad88b461cc816e5ad6e488556 273 SMART SM00382 54 242 4.3E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS14390 8dcf850ad88b461cc816e5ad6e488556 273 PANTHER PTHR24220 7 17 4.2E-148 T 23-04-2016 LT40_RS14390 8dcf850ad88b461cc816e5ad6e488556 273 PANTHER PTHR24220 42 268 4.2E-148 T 23-04-2016 LT40_RS14390 8dcf850ad88b461cc816e5ad6e488556 273 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS14390 8dcf850ad88b461cc816e5ad6e488556 273 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 269 2.1E-107 T 23-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 LT40_RS14390 8dcf850ad88b461cc816e5ad6e488556 273 Pfam PF00005 ABC transporter 46 193 1.8E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS14390 8dcf850ad88b461cc816e5ad6e488556 273 PANTHER PTHR24220:SF374 7 17 4.2E-148 T 23-04-2016 LT40_RS14390 8dcf850ad88b461cc816e5ad6e488556 273 PANTHER PTHR24220:SF374 42 268 4.2E-148 T 23-04-2016 LT40_RS00570 cfa430c9055c8a6730e01ec072ba8173 107 Gene3D G3DSA:3.30.70.20 4 99 2.0E-21 T 23-04-2016 LT40_RS00570 cfa430c9055c8a6730e01ec072ba8173 107 PANTHER PTHR11938:SF101 1 84 5.9E-54 T 23-04-2016 LT40_RS00570 cfa430c9055c8a6730e01ec072ba8173 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 5.2E-20 T 23-04-2016 IPR022569 Ferredoxin, C-terminal LT40_RS00570 cfa430c9055c8a6730e01ec072ba8173 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.4E-18 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 LT40_RS00570 cfa430c9055c8a6730e01ec072ba8173 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.4E-18 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 LT40_RS00570 cfa430c9055c8a6730e01ec072ba8173 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.4E-18 T 23-04-2016 IPR000813 7Fe ferredoxin GO:0009055 LT40_RS00570 cfa430c9055c8a6730e01ec072ba8173 107 SUPERFAMILY SSF54862 1 102 2.71E-24 T 23-04-2016 LT40_RS00570 cfa430c9055c8a6730e01ec072ba8173 107 Pfam PF00037 4Fe-4S binding domain 34 55 4.5E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LT40_RS00570 cfa430c9055c8a6730e01ec072ba8173 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS00570 cfa430c9055c8a6730e01ec072ba8173 107 PANTHER PTHR11938 1 84 5.9E-54 T 23-04-2016 LT40_RS01975 b522281dd9a384f1c9ce2751a62f4cef 167 PIRSF PIRSF001467 1 167 3.5E-25 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 LT40_RS01975 b522281dd9a384f1c9ce2751a62f4cef 167 Gene3D G3DSA:2.40.100.10 3 165 1.2E-50 T 23-04-2016 IPR029000 Cyclophilin-like domain LT40_RS01975 b522281dd9a384f1c9ce2751a62f4cef 167 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 38 55 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 LT40_RS01975 b522281dd9a384f1c9ce2751a62f4cef 167 SUPERFAMILY SSF50891 3 165 1.01E-53 T 23-04-2016 IPR029000 Cyclophilin-like domain LT40_RS01975 b522281dd9a384f1c9ce2751a62f4cef 167 PANTHER PTHR11071 5 167 1.8E-69 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 LT40_RS01975 b522281dd9a384f1c9ce2751a62f4cef 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 1.5E-11 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LT40_RS01975 b522281dd9a384f1c9ce2751a62f4cef 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 55 1.5E-11 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LT40_RS01975 b522281dd9a384f1c9ce2751a62f4cef 167 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 1.5E-11 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LT40_RS01975 b522281dd9a384f1c9ce2751a62f4cef 167 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 164 3.6E-46 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LT40_RS01975 b522281dd9a384f1c9ce2751a62f4cef 167 PANTHER PTHR11071:SF192 5 167 1.8E-69 T 23-04-2016 LT40_RS09960 cb8b31f4dcb90b6d509f4ebdcaf866a5 403 SUPERFAMILY SSF53383 10 378 1.26E-97 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS09960 cb8b31f4dcb90b6d509f4ebdcaf866a5 403 PANTHER PTHR21152:SF21 8 392 1.5E-126 T 23-04-2016 LT40_RS09960 cb8b31f4dcb90b6d509f4ebdcaf866a5 403 Pfam PF00266 Aminotransferase class-V 13 340 1.9E-27 T 23-04-2016 IPR000192 Aminotransferase class V domain LT40_RS09960 cb8b31f4dcb90b6d509f4ebdcaf866a5 403 PIRSF PIRSF000524 7 397 1.1E-120 T 23-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 LT40_RS09960 cb8b31f4dcb90b6d509f4ebdcaf866a5 403 PANTHER PTHR21152 8 392 1.5E-126 T 23-04-2016 LT40_RS09960 cb8b31f4dcb90b6d509f4ebdcaf866a5 403 Gene3D G3DSA:3.90.1150.10 270 380 1.1E-35 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS09960 cb8b31f4dcb90b6d509f4ebdcaf866a5 403 Gene3D G3DSA:3.40.640.10 23 269 7.8E-49 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS19770 b5f3976065a9171ca3080e7f1cab7ace 405 Gene3D G3DSA:1.20.1250.20 25 196 8.0E-19 T 23-04-2016 LT40_RS19770 b5f3976065a9171ca3080e7f1cab7ace 405 Gene3D G3DSA:1.20.1250.20 229 398 5.5E-19 T 23-04-2016 LT40_RS19770 b5f3976065a9171ca3080e7f1cab7ace 405 PANTHER PTHR23505 24 401 1.6E-127 T 23-04-2016 LT40_RS19770 b5f3976065a9171ca3080e7f1cab7ace 405 Pfam PF07690 Major Facilitator Superfamily 31 266 1.3E-21 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS19770 b5f3976065a9171ca3080e7f1cab7ace 405 PANTHER PTHR23505:SF8 24 401 1.6E-127 T 23-04-2016 LT40_RS19770 b5f3976065a9171ca3080e7f1cab7ace 405 SUPERFAMILY SSF103473 1 399 1.7E-53 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04850 e9a853bdd0b03ddbdbb54fd6aa699fff 331 Gene3D G3DSA:3.40.50.300 160 169 1.2E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04850 e9a853bdd0b03ddbdbb54fd6aa699fff 331 Gene3D G3DSA:3.40.50.300 50 107 1.2E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04850 e9a853bdd0b03ddbdbb54fd6aa699fff 331 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 326 3.2E-107 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 LT40_RS04850 e9a853bdd0b03ddbdbb54fd6aa699fff 331 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 27 313 2.8E-77 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 LT40_RS04850 e9a853bdd0b03ddbdbb54fd6aa699fff 331 PANTHER PTHR30160 1 330 1.0E-87 T 23-04-2016 LT40_RS04850 e9a853bdd0b03ddbdbb54fd6aa699fff 331 SUPERFAMILY SSF52540 51 192 3.6E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04850 e9a853bdd0b03ddbdbb54fd6aa699fff 331 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 6 331 38.616 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 LT40_RS04850 e9a853bdd0b03ddbdbb54fd6aa699fff 331 PANTHER PTHR30160:SF13 1 330 1.0E-87 T 23-04-2016 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 Pfam PF09190 DALR domain 340 401 3.0E-20 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 SUPERFAMILY SSF47323 316 458 2.35E-37 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 SMART SM00840 340 401 2.8E-25 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 Gene3D G3DSA:1.20.120.640 306 391 1.8E-23 T 23-04-2016 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 PANTHER PTHR10890 2 460 2.6E-242 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 Gene3D G3DSA:3.40.50.620 19 305 1.5E-110 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 457 2.7E-175 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.3E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.3E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.3E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.3E-30 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 SUPERFAMILY SSF52374 3 313 1.18E-101 T 23-04-2016 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 6.1E-136 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 LT40_RS01985 959c64e071a57eb7342517e3bca2af96 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 458 38.719 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 LT40_RS00130 a905e3118753cb712e52af625706fbc2 259 Pfam PF04954 Siderophore-interacting protein 142 253 4.7E-32 T 23-04-2016 IPR007037 Siderophore-interacting protein LT40_RS00130 a905e3118753cb712e52af625706fbc2 259 Gene3D G3DSA:3.40.50.80 137 256 1.8E-36 T 23-04-2016 LT40_RS00130 a905e3118753cb712e52af625706fbc2 259 Gene3D G3DSA:2.40.30.10 12 133 1.1E-37 T 23-04-2016 LT40_RS00130 a905e3118753cb712e52af625706fbc2 259 Pfam PF08021 Siderophore-interacting FAD-binding domain 22 134 1.8E-36 T 23-04-2016 IPR013113 FAD-binding 9, siderophore-interacting LT40_RS00130 a905e3118753cb712e52af625706fbc2 259 PANTHER PTHR30157:SF1 3 252 1.2E-73 T 23-04-2016 LT40_RS00130 a905e3118753cb712e52af625706fbc2 259 SUPERFAMILY SSF63380 11 137 4.08E-11 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LT40_RS00130 a905e3118753cb712e52af625706fbc2 259 PANTHER PTHR30157 3 252 1.2E-73 T 23-04-2016 LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 Gene3D G3DSA:3.90.226.10 60 271 3.0E-47 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 1.3E-63 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 315 48.657 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 SUPERFAMILY SSF52096 5 314 2.73E-100 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 PANTHER PTHR22855:SF42 1 314 1.4E-126 T 23-04-2016 LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 314 3.8E-153 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 2.0E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 2.0E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 2.0E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 2.0E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 2.0E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 2.0E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 LT40_RS00490 b78fa525b1710efaa51a350497c2c2e3 315 PANTHER PTHR22855 1 314 1.4E-126 T 23-04-2016 LT40_RS14100 3984ce3ca43ef3bfa131c83bad4ebd2e 148 Gene3D G3DSA:3.40.50.2300 30 143 1.7E-26 T 23-04-2016 LT40_RS14100 3984ce3ca43ef3bfa131c83bad4ebd2e 148 PANTHER PTHR26402 31 142 1.1E-22 T 23-04-2016 LT40_RS14100 3984ce3ca43ef3bfa131c83bad4ebd2e 148 Pfam PF00072 Response regulator receiver domain 31 140 7.8E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS14100 3984ce3ca43ef3bfa131c83bad4ebd2e 148 SUPERFAMILY SSF52172 30 145 9.53E-29 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS14100 3984ce3ca43ef3bfa131c83bad4ebd2e 148 SMART SM00448 28 141 3.5E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS01285 2aec2001702966a8b16c61d8dd097912 321 SUPERFAMILY SSF53474 7 287 6.87E-33 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS01285 2aec2001702966a8b16c61d8dd097912 321 Gene3D G3DSA:3.40.50.1820 36 285 3.2E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS01285 2aec2001702966a8b16c61d8dd097912 321 PANTHER PTHR10992 84 283 5.1E-13 T 23-04-2016 LT40_RS01285 2aec2001702966a8b16c61d8dd097912 321 Pfam PF12146 Serine aminopeptidase, S33 83 284 2.6E-12 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 LT40_RS05195 6694d94e5abe5d7de633d416d94fb592 110 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 6 106 1.9E-29 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 LT40_RS05195 6694d94e5abe5d7de633d416d94fb592 110 SUPERFAMILY SSF103481 6 106 7.98E-10 T 23-04-2016 LT40_RS05195 6694d94e5abe5d7de633d416d94fb592 110 PANTHER PTHR36116:SF1 1 106 3.0E-43 T 23-04-2016 LT40_RS05195 6694d94e5abe5d7de633d416d94fb592 110 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 106 21.843 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 LT40_RS05195 6694d94e5abe5d7de633d416d94fb592 110 PANTHER PTHR36116 1 106 3.0E-43 T 23-04-2016 LT40_RS15180 6698e8a33477fb20aecaf770171264e0 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 257 264 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS15180 6698e8a33477fb20aecaf770171264e0 486 Gene3D G3DSA:3.40.309.10 273 456 1.2E-69 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS15180 6698e8a33477fb20aecaf770171264e0 486 SUPERFAMILY SSF53720 9 482 1.7E-174 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS15180 6698e8a33477fb20aecaf770171264e0 486 PANTHER PTHR11699 1 478 6.1E-284 T 23-04-2016 LT40_RS15180 6698e8a33477fb20aecaf770171264e0 486 Gene3D G3DSA:3.40.605.10 15 272 1.2E-101 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS15180 6698e8a33477fb20aecaf770171264e0 486 PANTHER PTHR11699:SF49 1 478 6.1E-284 T 23-04-2016 LT40_RS15180 6698e8a33477fb20aecaf770171264e0 486 Pfam PF00171 Aldehyde dehydrogenase family 22 479 5.1E-172 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS15180 6698e8a33477fb20aecaf770171264e0 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS15180 6698e8a33477fb20aecaf770171264e0 486 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 33 478 1.3E-207 T 23-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 LT40_RS08205 3afdf9912ba0799c08426dd151bf271a 314 PIRSF PIRSF029792 1 314 2.0E-95 T 23-04-2016 IPR008794 Proline racemase family LT40_RS08205 3afdf9912ba0799c08426dd151bf271a 314 Pfam PF05544 Proline racemase 6 312 2.3E-104 T 23-04-2016 IPR008794 Proline racemase family LT40_RS08205 3afdf9912ba0799c08426dd151bf271a 314 PANTHER PTHR33442 3 314 4.9E-144 T 23-04-2016 LT40_RS08205 3afdf9912ba0799c08426dd151bf271a 314 Gene3D G3DSA:3.10.310.10 144 302 4.4E-54 T 23-04-2016 LT40_RS08205 3afdf9912ba0799c08426dd151bf271a 314 SUPERFAMILY SSF54506 3 312 5.83E-98 T 23-04-2016 LT40_RS08205 3afdf9912ba0799c08426dd151bf271a 314 PANTHER PTHR33442:SF2 3 314 4.9E-144 T 23-04-2016 LT40_RS08205 3afdf9912ba0799c08426dd151bf271a 314 Gene3D G3DSA:3.10.310.10 3 143 1.4E-50 T 23-04-2016 LT40_RS04840 ac2a8ce73584dbd1e4f81b2edfd50925 211 PANTHER PTHR30625 1 196 2.6E-64 T 23-04-2016 LT40_RS04840 ac2a8ce73584dbd1e4f81b2edfd50925 211 PANTHER PTHR30625:SF0 1 196 2.6E-64 T 23-04-2016 LT40_RS04840 ac2a8ce73584dbd1e4f81b2edfd50925 211 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 188 6.9E-35 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LT40_RS06720 384e8fe3c6d0ebe383c7f0a225904b39 190 PIRSF PIRSF000709 5 186 2.2E-7 T 23-04-2016 LT40_RS06720 384e8fe3c6d0ebe383c7f0a225904b39 190 Gene3D G3DSA:3.40.50.1240 1 182 3.3E-45 T 23-04-2016 IPR029033 Histidine phosphatase superfamily LT40_RS06720 384e8fe3c6d0ebe383c7f0a225904b39 190 PANTHER PTHR23029 1 165 3.4E-32 T 23-04-2016 LT40_RS06720 384e8fe3c6d0ebe383c7f0a225904b39 190 PANTHER PTHR23029:SF1 1 165 3.4E-32 T 23-04-2016 LT40_RS06720 384e8fe3c6d0ebe383c7f0a225904b39 190 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 184 1.1E-41 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LT40_RS06720 384e8fe3c6d0ebe383c7f0a225904b39 190 SMART SM00855 4 153 3.8E-12 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LT40_RS06720 384e8fe3c6d0ebe383c7f0a225904b39 190 SUPERFAMILY SSF53254 1 181 3.85E-44 T 23-04-2016 IPR029033 Histidine phosphatase superfamily LT40_RS09805 e33ff1dd9c7495093a8627c5329c89ed 398 PANTHER PTHR23513 3 378 6.3E-98 T 23-04-2016 LT40_RS09805 e33ff1dd9c7495093a8627c5329c89ed 398 Gene3D G3DSA:1.20.1250.20 7 173 2.4E-15 T 23-04-2016 LT40_RS09805 e33ff1dd9c7495093a8627c5329c89ed 398 Gene3D G3DSA:1.20.1250.20 201 378 2.0E-9 T 23-04-2016 LT40_RS09805 e33ff1dd9c7495093a8627c5329c89ed 398 PANTHER PTHR23513:SF9 3 378 6.3E-98 T 23-04-2016 LT40_RS09805 e33ff1dd9c7495093a8627c5329c89ed 398 SUPERFAMILY SSF103473 4 379 4.84E-34 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS09805 e33ff1dd9c7495093a8627c5329c89ed 398 Pfam PF05977 Transmembrane secretion effector 4 387 5.3E-39 T 23-04-2016 IPR010290 Transmembrane secretion effector LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 SUPERFAMILY SSF82866 296 497 9.16E-48 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 PANTHER PTHR32063:SF13 1 1057 0.0 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 SUPERFAMILY SSF82866 835 1027 7.72E-46 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 Gene3D G3DSA:1.20.1640.10 291 508 3.9E-58 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 SUPERFAMILY SSF82693 38 130 1.12E-26 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 SUPERFAMILY SSF82693 567 673 1.1E-27 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 SUPERFAMILY SSF82693 676 725 2.14E-27 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 SUPERFAMILY SSF82693 812 860 2.14E-27 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 PANTHER PTHR32063 1 1057 0.0 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 Gene3D G3DSA:3.30.70.1430 569 673 6.1E-33 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 Gene3D G3DSA:3.30.2090.10 725 812 1.3E-27 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 SUPERFAMILY SSF82714 182 271 6.41E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 SUPERFAMILY SSF82714 726 812 4.97E-24 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 PRINTS PR00702 Acriflavin resistance protein family signature 626 640 6.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 6.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 6.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 6.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 6.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 6.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 6.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.4E-108 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 Gene3D G3DSA:3.30.2090.10 181 275 6.8E-23 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 Gene3D G3DSA:1.10.3850.10 818 1029 7.7E-55 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 SUPERFAMILY SSF82693 274 330 7.85E-26 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 SUPERFAMILY SSF82693 135 182 7.85E-26 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 Gene3D G3DSA:3.30.70.1430 38 139 3.2E-33 T 23-04-2016 LT40_RS04380 994b10ef7397db85f0914ee3a289d7e4 1060 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1044 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 LT40_RS07390 0f5a2b28bcaefad0406421044648064a 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS07390 0f5a2b28bcaefad0406421044648064a 429 Pfam PF07690 Major Facilitator Superfamily 16 370 1.6E-30 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS07390 0f5a2b28bcaefad0406421044648064a 429 SUPERFAMILY SSF103473 8 419 4.32E-66 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS07390 0f5a2b28bcaefad0406421044648064a 429 PANTHER PTHR23508:SF14 7 415 1.3E-283 T 23-04-2016 LT40_RS07390 0f5a2b28bcaefad0406421044648064a 429 ProSitePatterns PS00216 Sugar transport proteins signature 1. 288 305 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS07390 0f5a2b28bcaefad0406421044648064a 429 Gene3D G3DSA:1.20.1250.20 233 420 2.9E-21 T 23-04-2016 LT40_RS07390 0f5a2b28bcaefad0406421044648064a 429 Gene3D G3DSA:1.20.1250.20 9 215 1.1E-25 T 23-04-2016 LT40_RS07390 0f5a2b28bcaefad0406421044648064a 429 PANTHER PTHR23508 7 415 1.3E-283 T 23-04-2016 LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 PANTHER PTHR32089 44 521 4.3E-154 T 23-04-2016 LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 Pfam PF08447 PAS fold 31 114 4.4E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 519 8.8E-52 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 SUPERFAMILY SSF58104 243 521 1.05E-76 T 23-04-2016 LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 279 308 1.9E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 1.9E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 1.9E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 Gene3D G3DSA:1.10.287.950 275 491 3.2E-61 T 23-04-2016 LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 SUPERFAMILY SSF55785 21 114 8.7E-24 T 23-04-2016 IPR000014 PAS domain LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 Gene3D G3DSA:3.30.450.20 20 112 7.1E-21 T 23-04-2016 LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 PANTHER PTHR32089:SF64 44 521 4.3E-154 T 23-04-2016 LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 111 1.7E-10 T 23-04-2016 IPR000014 PAS domain LT40_RS06795 cb20bd7abdb73f7c16cfe67ca1a0c66f 521 SMART SM00283 259 520 4.0E-81 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS16240 98425ff49b35b4ec1cc42ecd3775a47b 135 Gene3D G3DSA:3.40.1580.10 2 135 1.3E-65 T 23-04-2016 IPR018958 SMI1/KNR4-like domain LT40_RS16240 98425ff49b35b4ec1cc42ecd3775a47b 135 Pfam PF14567 SMI1-KNR4 cell-wall 2 133 2.3E-46 T 23-04-2016 LT40_RS16240 98425ff49b35b4ec1cc42ecd3775a47b 135 SUPERFAMILY SSF160631 2 134 2.35E-45 T 23-04-2016 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 Pfam PF00108 Thiolase, N-terminal domain 4 267 8.8E-79 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 Gene3D G3DSA:3.40.47.10 3 125 5.7E-72 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 Gene3D G3DSA:3.40.47.10 200 281 5.7E-72 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 3.2E-136 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 7.3E-42 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 Gene3D G3DSA:3.40.47.10 282 399 1.1E-59 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 Gene3D G3DSA:3.40.47.10 154 199 1.1E-59 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 PANTHER PTHR18919:SF91 1 400 3.7E-242 T 23-04-2016 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 SUPERFAMILY SSF53901 3 275 1.41E-87 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 PIRSF PIRSF000429 1 400 9.2E-135 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 PANTHER PTHR18919 1 400 3.7E-242 T 23-04-2016 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 400 7.5E-220 T 23-04-2016 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 LT40_RS04345 4b8be2625232f5cb71f164c10513895b 400 SUPERFAMILY SSF53901 278 399 1.4E-43 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS04370 80359774e047e65606958991b9ab2d74 421 Pfam PF03573 outer membrane porin, OprD family 32 420 4.7E-152 T 23-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 LT40_RS04370 80359774e047e65606958991b9ab2d74 421 Gene3D G3DSA:2.40.160.10 37 421 1.8E-150 T 23-04-2016 IPR023614 Porin domain LT40_RS04370 80359774e047e65606958991b9ab2d74 421 PANTHER PTHR34596 3 421 1.2E-158 T 23-04-2016 LT40_RS09190 771d325515a194ebbb06bf350fe411fd 343 SUPERFAMILY SSF51735 1 334 4.06E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09190 771d325515a194ebbb06bf350fe411fd 343 PANTHER PTHR10366 2 275 4.7E-192 T 23-04-2016 LT40_RS09190 771d325515a194ebbb06bf350fe411fd 343 PANTHER PTHR10366 293 338 4.7E-192 T 23-04-2016 LT40_RS09190 771d325515a194ebbb06bf350fe411fd 343 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 1 339 53.639 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 LT40_RS09190 771d325515a194ebbb06bf350fe411fd 343 PANTHER PTHR10366:SF32 2 275 4.7E-192 T 23-04-2016 LT40_RS09190 771d325515a194ebbb06bf350fe411fd 343 PANTHER PTHR10366:SF32 293 338 4.7E-192 T 23-04-2016 LT40_RS09190 771d325515a194ebbb06bf350fe411fd 343 Gene3D G3DSA:3.90.25.10 287 339 1.2E-48 T 23-04-2016 LT40_RS09190 771d325515a194ebbb06bf350fe411fd 343 Gene3D G3DSA:3.90.25.10 186 240 1.2E-48 T 23-04-2016 LT40_RS09190 771d325515a194ebbb06bf350fe411fd 343 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 335 1.3E-146 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 LT40_RS09190 771d325515a194ebbb06bf350fe411fd 343 Gene3D G3DSA:3.40.50.720 1 183 2.2E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09190 771d325515a194ebbb06bf350fe411fd 343 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 329 2.1E-138 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 9.7E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 Gene3D G3DSA:3.40.190.10 174 269 1.2E-24 T 23-04-2016 LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 SUPERFAMILY SSF46785 7 88 4.15E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 Pfam PF03466 LysR substrate binding domain 101 294 3.4E-21 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 Gene3D G3DSA:3.40.190.10 273 300 2.7E-24 T 23-04-2016 LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 Gene3D G3DSA:3.40.190.10 93 173 2.7E-24 T 23-04-2016 LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 2.21E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 2.21E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 2.21E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 Gene3D G3DSA:1.10.10.10 2 89 4.6E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 SUPERFAMILY SSF53850 93 295 1.19E-37 T 23-04-2016 LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 PANTHER PTHR30118 1 298 1.0E-110 T 23-04-2016 LT40_RS11445 c116abfefac7ed384bba9d460a0b8ba6 304 PANTHER PTHR30118:SF8 1 298 1.0E-110 T 23-04-2016 LT40_RS09595 d0524d360a7891ac9c79f43f8bd84572 471 Pfam PF00817 impB/mucB/samB family 24 150 1.3E-6 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS09595 d0524d360a7891ac9c79f43f8bd84572 471 PANTHER PTHR35369:SF2 1 471 2.0E-156 T 23-04-2016 LT40_RS09595 d0524d360a7891ac9c79f43f8bd84572 471 PANTHER PTHR35369 1 471 2.0E-156 T 23-04-2016 LT40_RS09595 d0524d360a7891ac9c79f43f8bd84572 471 SUPERFAMILY SSF56672 1 227 1.33E-33 T 23-04-2016 LT40_RS02815 59d555890c5dd931eb63656d5bdf4ef6 214 Pfam PF04337 Protein of unknown function, DUF480 14 158 3.0E-53 T 23-04-2016 IPR007432 Protein of unknown function DUF480 LT40_RS02815 59d555890c5dd931eb63656d5bdf4ef6 214 Gene3D G3DSA:1.10.10.10 5 96 4.4E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02815 59d555890c5dd931eb63656d5bdf4ef6 214 Gene3D G3DSA:1.10.10.10 99 173 1.1E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02815 59d555890c5dd931eb63656d5bdf4ef6 214 SUPERFAMILY SSF46785 12 91 2.61E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02815 59d555890c5dd931eb63656d5bdf4ef6 214 Hamap MF_01584 UPF0502 protein YceH [yceH]. 14 212 27.103 T 23-04-2016 IPR007432 Protein of unknown function DUF480 LT40_RS02815 59d555890c5dd931eb63656d5bdf4ef6 214 SUPERFAMILY SSF46785 94 171 7.62E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02815 59d555890c5dd931eb63656d5bdf4ef6 214 PANTHER PTHR38768:SF1 2 214 8.3E-70 T 23-04-2016 LT40_RS02815 59d555890c5dd931eb63656d5bdf4ef6 214 PANTHER PTHR38768 2 214 8.3E-70 T 23-04-2016 LT40_RS05125 97fa95bca16565066753bf4f9092461f 264 SUPERFAMILY SSF53639 22 223 1.88E-58 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS05125 97fa95bca16565066753bf4f9092461f 264 Gene3D G3DSA:3.40.225.10 21 234 3.9E-60 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS05125 97fa95bca16565066753bf4f9092461f 264 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 28 208 1.3E-43 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS05125 97fa95bca16565066753bf4f9092461f 264 PANTHER PTHR10672 22 258 1.5E-97 T 23-04-2016 LT40_RS05125 97fa95bca16565066753bf4f9092461f 264 SMART SM01007 27 208 1.2E-58 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal LT40_RS01105 9738bdefab47d3f64708fc1bea0117c6 447 PANTHER PTHR30420:SF2 5 447 6.2E-296 T 23-04-2016 LT40_RS01105 9738bdefab47d3f64708fc1bea0117c6 447 Gene3D G3DSA:3.75.10.20 1 446 1.6E-223 T 23-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 LT40_RS01105 9738bdefab47d3f64708fc1bea0117c6 447 PANTHER PTHR30420 5 447 6.2E-296 T 23-04-2016 LT40_RS01105 9738bdefab47d3f64708fc1bea0117c6 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 447 60.277 T 23-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 LT40_RS01105 9738bdefab47d3f64708fc1bea0117c6 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 5 446 2.5E-241 T 23-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 LT40_RS01105 9738bdefab47d3f64708fc1bea0117c6 447 SUPERFAMILY SSF55909 4 446 5.89E-203 T 23-04-2016 LT40_RS01105 9738bdefab47d3f64708fc1bea0117c6 447 Pfam PF04996 Succinylarginine dihydrolase 4 446 2.7E-220 T 23-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 LT40_RS00540 021164c14ea2aa73e57e55c2b5f80f94 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00540 021164c14ea2aa73e57e55c2b5f80f94 157 Gene3D G3DSA:3.30.1330.50 1 156 1.3E-73 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00540 021164c14ea2aa73e57e55c2b5f80f94 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 155 1.5E-72 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00540 021164c14ea2aa73e57e55c2b5f80f94 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 37.362 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00540 021164c14ea2aa73e57e55c2b5f80f94 157 SUPERFAMILY SSF69765 1 156 5.63E-68 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00540 021164c14ea2aa73e57e55c2b5f80f94 157 Pfam PF02542 YgbB family 1 154 8.4E-69 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 LT40_RS00540 021164c14ea2aa73e57e55c2b5f80f94 157 PANTHER PTHR32125 1 157 7.9E-62 T 23-04-2016 LT40_RS00035 dcc1cb6ff9855ad49114c87398784e90 179 SUPERFAMILY SSF52499 3 154 8.11E-43 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS00035 dcc1cb6ff9855ad49114c87398784e90 179 Pfam PF00857 Isochorismatase family 3 149 1.3E-34 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS00035 dcc1cb6ff9855ad49114c87398784e90 179 PANTHER PTHR11080 3 167 3.0E-34 T 23-04-2016 LT40_RS00035 dcc1cb6ff9855ad49114c87398784e90 179 Gene3D G3DSA:3.40.50.850 2 167 9.0E-44 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS00065 f58079cf622ba51651cd83e5d4a53d67 415 Pfam PF00268 Ribonucleotide reductase, small chain 95 382 2.1E-82 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 LT40_RS00065 f58079cf622ba51651cd83e5d4a53d67 415 PANTHER PTHR23409 19 410 5.3E-186 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 LT40_RS00065 f58079cf622ba51651cd83e5d4a53d67 415 PANTHER PTHR23409:SF18 19 410 5.3E-186 T 23-04-2016 LT40_RS00065 f58079cf622ba51651cd83e5d4a53d67 415 PIRSF PIRSF000355 64 415 8.6E-143 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 LT40_RS00065 f58079cf622ba51651cd83e5d4a53d67 415 Gene3D G3DSA:1.10.620.20 79 386 2.5E-108 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 LT40_RS00065 f58079cf622ba51651cd83e5d4a53d67 415 SUPERFAMILY SSF47240 59 388 1.41E-96 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS01115 a25e1ef41c6b82108f24f9392390a545 332 PANTHER PTHR15162 1 327 5.4E-71 T 23-04-2016 LT40_RS01115 a25e1ef41c6b82108f24f9392390a545 332 Gene3D G3DSA:3.40.630.10 47 239 6.3E-13 T 23-04-2016 LT40_RS01115 a25e1ef41c6b82108f24f9392390a545 332 PIRSF PIRSF017020 1 332 1.2E-117 T 23-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 LT40_RS01115 a25e1ef41c6b82108f24f9392390a545 332 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 6 327 1.9E-117 T 23-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 LT40_RS01115 a25e1ef41c6b82108f24f9392390a545 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 49 329 1.2E-72 T 23-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 LT40_RS01115 a25e1ef41c6b82108f24f9392390a545 332 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 332 150.574 T 23-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 LT40_RS01115 a25e1ef41c6b82108f24f9392390a545 332 SUPERFAMILY SSF53187 6 328 1.26E-75 T 23-04-2016 LT40_RS09265 3c865e829b456c3376eb4387a2fcad9e 332 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 317 4.8E-101 T 23-04-2016 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130|UniPathway: UPA00081 LT40_RS11580 e0a3ec092411a155a9ffa8059809f58a 198 PANTHER PTHR18968:SF81 13 172 5.2E-19 T 23-04-2016 LT40_RS11580 e0a3ec092411a155a9ffa8059809f58a 198 PANTHER PTHR18968 13 172 5.2E-19 T 23-04-2016 LT40_RS11580 e0a3ec092411a155a9ffa8059809f58a 198 SUPERFAMILY SSF52518 23 176 9.58E-24 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS11580 e0a3ec092411a155a9ffa8059809f58a 198 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 48 123 1.0E-15 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LT40_RS11580 e0a3ec092411a155a9ffa8059809f58a 198 Gene3D G3DSA:3.40.50.970 17 175 5.4E-19 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS07410 1a9a9b034387b8cac24b324f2fe75363 91 Pfam PF11625 Protein of unknown function (DUF3253) 6 84 1.4E-21 T 23-04-2016 IPR021660 Protein of unknown function DUF3253 LT40_RS07410 1a9a9b034387b8cac24b324f2fe75363 91 SUPERFAMILY SSF46785 3 85 1.66E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07410 1a9a9b034387b8cac24b324f2fe75363 91 Gene3D G3DSA:1.10.10.10 5 85 9.4E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS20115 800bcd91574d0aeb40be2b95cd4b9bfa 790 Pfam PF00593 TonB dependent receptor 541 787 3.7E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS20115 800bcd91574d0aeb40be2b95cd4b9bfa 790 SMART SM00965 59 110 2.7E-13 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 LT40_RS20115 800bcd91574d0aeb40be2b95cd4b9bfa 790 Gene3D G3DSA:2.170.130.10 147 262 1.7E-31 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS20115 800bcd91574d0aeb40be2b95cd4b9bfa 790 SUPERFAMILY SSF56935 133 790 1.63E-117 T 23-04-2016 LT40_RS20115 800bcd91574d0aeb40be2b95cd4b9bfa 790 Gene3D G3DSA:2.40.170.20 263 790 7.0E-115 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS20115 800bcd91574d0aeb40be2b95cd4b9bfa 790 Pfam PF07715 TonB-dependent Receptor Plug Domain 148 260 3.0E-20 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS20115 800bcd91574d0aeb40be2b95cd4b9bfa 790 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 773 790 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site LT40_RS20115 800bcd91574d0aeb40be2b95cd4b9bfa 790 Pfam PF07660 Secretin and TonB N terminus short domain 60 108 6.2E-9 T 23-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 LT40_RS20115 800bcd91574d0aeb40be2b95cd4b9bfa 790 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 148 790 6.0E-122 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS20115 800bcd91574d0aeb40be2b95cd4b9bfa 790 PANTHER PTHR30442 1 787 4.1E-136 T 23-04-2016 LT40_RS08500 be8093f2d3a0e7cf1de7571bef140704 136 Pfam PF03479 Domain of unknown function (DUF296) 24 132 8.9E-16 T 23-04-2016 IPR005175 PPC domain LT40_RS08500 be8093f2d3a0e7cf1de7571bef140704 136 SUPERFAMILY SSF117856 16 132 1.83E-19 T 23-04-2016 LT40_RS08500 be8093f2d3a0e7cf1de7571bef140704 136 Gene3D G3DSA:3.30.1330.80 16 133 3.3E-21 T 23-04-2016 LT40_RS16860 70cee278a529f80f20c68df88731e7ad 260 PANTHER PTHR18966:SF191 11 251 2.8E-34 T 23-04-2016 LT40_RS16860 70cee278a529f80f20c68df88731e7ad 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 253 1.5E-43 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS16860 70cee278a529f80f20c68df88731e7ad 260 PANTHER PTHR18966 11 251 2.8E-34 T 23-04-2016 LT40_RS16860 70cee278a529f80f20c68df88731e7ad 260 Gene3D G3DSA:3.40.190.10 16 140 3.6E-36 T 23-04-2016 LT40_RS16860 70cee278a529f80f20c68df88731e7ad 260 SUPERFAMILY SSF53850 27 257 9.95E-51 T 23-04-2016 LT40_RS16860 70cee278a529f80f20c68df88731e7ad 260 SMART SM00062 35 255 4.4E-32 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS16860 70cee278a529f80f20c68df88731e7ad 260 Gene3D G3DSA:3.40.190.10 141 204 2.9E-10 T 23-04-2016 LT40_RS16465 cf09fd6e4f8e7fbb6d41cb3228ed7b3b 283 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 205 1.1E-9 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LT40_RS16465 cf09fd6e4f8e7fbb6d41cb3228ed7b3b 283 PANTHER PTHR10366 5 280 3.0E-42 T 23-04-2016 LT40_RS16465 cf09fd6e4f8e7fbb6d41cb3228ed7b3b 283 Gene3D G3DSA:3.40.50.720 2 207 2.5E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS16465 cf09fd6e4f8e7fbb6d41cb3228ed7b3b 283 SUPERFAMILY SSF51735 2 281 2.37E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS16465 cf09fd6e4f8e7fbb6d41cb3228ed7b3b 283 PANTHER PTHR10366:SF430 5 280 3.0E-42 T 23-04-2016 LT40_RS10990 bd130487141db25d9accc277e3dbfc98 142 Pfam PF13778 Domain of unknown function (DUF4174) 25 140 2.8E-25 T 23-04-2016 IPR025232 Domain of unknown function DUF4174 LT40_RS09220 17efc77746ea216e5b52985929caf52c 666 Pfam PF13727 CoA-binding domain 70 255 2.0E-6 T 23-04-2016 LT40_RS09220 17efc77746ea216e5b52985929caf52c 666 SUPERFAMILY SSF51735 297 585 1.94E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09220 17efc77746ea216e5b52985929caf52c 666 Pfam PF02719 Polysaccharide biosynthesis protein 300 607 9.3E-127 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain LT40_RS09220 17efc77746ea216e5b52985929caf52c 666 PANTHER PTHR10366 470 591 5.1E-127 T 23-04-2016 LT40_RS09220 17efc77746ea216e5b52985929caf52c 666 PANTHER PTHR10366 299 454 5.1E-127 T 23-04-2016 LT40_RS09220 17efc77746ea216e5b52985929caf52c 666 PANTHER PTHR10366:SF256 470 591 5.1E-127 T 23-04-2016 LT40_RS09220 17efc77746ea216e5b52985929caf52c 666 PANTHER PTHR10366:SF256 299 454 5.1E-127 T 23-04-2016 LT40_RS09220 17efc77746ea216e5b52985929caf52c 666 SUPERFAMILY SSF51735 159 284 3.23E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09220 17efc77746ea216e5b52985929caf52c 666 Gene3D G3DSA:3.40.50.720 299 559 1.4E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09220 17efc77746ea216e5b52985929caf52c 666 Gene3D G3DSA:3.40.50.720 156 242 3.9E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02420 0c1f62c86558540236ea65e4a5c09157 452 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS02420 0c1f62c86558540236ea65e4a5c09157 452 SUPERFAMILY SSF52540 103 372 4.39E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02420 0c1f62c86558540236ea65e4a5c09157 452 Gene3D G3DSA:3.40.50.300 130 400 3.5E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02420 0c1f62c86558540236ea65e4a5c09157 452 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 27 446 1.8E-173 T 23-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS02420 0c1f62c86558540236ea65e4a5c09157 452 SMART SM00382 167 350 6.6E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02420 0c1f62c86558540236ea65e4a5c09157 452 PANTHER PTHR15184:SF9 5 446 7.7E-231 T 23-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS02420 0c1f62c86558540236ea65e4a5c09157 452 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 155 366 1.9E-73 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS02420 0c1f62c86558540236ea65e4a5c09157 452 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 444 4.9E-195 T 23-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LT40_RS02420 0c1f62c86558540236ea65e4a5c09157 452 PANTHER PTHR15184 5 446 7.7E-231 T 23-04-2016 LT40_RS01140 7425dbfc11f2bf8b7fa7f25c9547e568 62 SUPERFAMILY SSF117130 1 55 8.76E-18 T 23-04-2016 LT40_RS01140 7425dbfc11f2bf8b7fa7f25c9547e568 62 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 1.3E-25 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS01140 7425dbfc11f2bf8b7fa7f25c9547e568 62 PANTHER PTHR34984 1 62 4.0E-28 T 23-04-2016 LT40_RS01140 7425dbfc11f2bf8b7fa7f25c9547e568 62 Pfam PF02599 Global regulator protein family 1 53 1.7E-24 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS01140 7425dbfc11f2bf8b7fa7f25c9547e568 62 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.012 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS01140 7425dbfc11f2bf8b7fa7f25c9547e568 62 PANTHER PTHR34984:SF1 1 62 4.0E-28 T 23-04-2016 LT40_RS01140 7425dbfc11f2bf8b7fa7f25c9547e568 62 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 4.0E-20 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 LT40_RS04775 21520f10c7b761169240ba299e5665d7 164 Pfam PF10263 SprT-like family 10 156 7.0E-28 T 23-04-2016 IPR006640 SprT-like LT40_RS04775 21520f10c7b761169240ba299e5665d7 164 SMART SM00731 7 158 1.4E-43 T 23-04-2016 IPR006640 SprT-like LT40_RS04775 21520f10c7b761169240ba299e5665d7 164 PANTHER PTHR38773 1 164 2.5E-73 T 23-04-2016 LT40_RS04775 21520f10c7b761169240ba299e5665d7 164 Hamap MF_00746 Protein SprT [sprT]. 3 158 36.655 T 23-04-2016 IPR023483 Uncharacterised protein family SprT LT40_RS17380 38edbc38d3cd21b8ed57c5227e30e16e 156 SUPERFAMILY SSF55729 4 151 1.36E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS17380 38edbc38d3cd21b8ed57c5227e30e16e 156 Pfam PF13673 Acetyltransferase (GNAT) domain 46 150 4.4E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS17380 38edbc38d3cd21b8ed57c5227e30e16e 156 PANTHER PTHR23091 1 150 1.1E-42 T 23-04-2016 LT40_RS17380 38edbc38d3cd21b8ed57c5227e30e16e 156 Gene3D G3DSA:3.40.630.30 3 149 4.0E-50 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS17380 38edbc38d3cd21b8ed57c5227e30e16e 156 PANTHER PTHR23091:SF275 1 150 1.1E-42 T 23-04-2016 LT40_RS17115 391ddb301b146f24819b3ea460822fda 309 Gene3D G3DSA:2.160.10.10 193 299 1.3E-25 T 23-04-2016 LT40_RS17115 391ddb301b146f24819b3ea460822fda 309 PANTHER PTHR23416:SF65 56 300 2.4E-89 T 23-04-2016 LT40_RS17115 391ddb301b146f24819b3ea460822fda 309 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 198 234 0.0011 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS17115 391ddb301b146f24819b3ea460822fda 309 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 253 287 4.5E-6 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS17115 391ddb301b146f24819b3ea460822fda 309 Gene3D G3DSA:1.10.3130.10 40 192 1.7E-41 T 23-04-2016 LT40_RS17115 391ddb301b146f24819b3ea460822fda 309 SUPERFAMILY SSF51161 125 294 4.02E-43 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS17115 391ddb301b146f24819b3ea460822fda 309 PANTHER PTHR23416 56 300 2.4E-89 T 23-04-2016 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 Gene3D G3DSA:3.90.380.10 158 384 4.3E-35 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 SUPERFAMILY SSF55961 167 389 2.2E-47 T 23-04-2016 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 200 385 5.1E-33 T 23-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 PANTHER PTHR21266:SF2 17 384 3.7E-61 T 23-04-2016 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 SUPERFAMILY SSF50022 14 165 8.9E-40 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 PANTHER PTHR21266 17 384 3.7E-61 T 23-04-2016 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 104 124 1.5E-18 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 83 103 1.5E-18 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 150 176 1.5E-18 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 194 216 1.5E-18 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 32 57 1.5E-18 T 23-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 Pfam PF00355 Rieske [2Fe-2S] domain 47 131 1.2E-17 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS07065 9c0e58ad2310b6d5bf1307c01a323188 393 Gene3D G3DSA:2.102.10.10 47 157 1.7E-22 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 Pfam PF12840 Helix-turn-helix domain 20 75 3.5E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 SUPERFAMILY SSF53335 126 309 4.55E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 PANTHER PTHR10108 39 302 5.4E-34 T 23-04-2016 LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 SUPERFAMILY SSF46785 6 85 7.4E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 Gene3D G3DSA:3.40.50.150 151 301 1.1E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 SMART SM00418 18 99 1.3E-9 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 Gene3D G3DSA:1.10.10.10 5 93 1.3E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 Pfam PF13489 Methyltransferase domain 152 277 7.3E-19 T 23-04-2016 LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 PANTHER PTHR10108:SF820 39 302 5.4E-34 T 23-04-2016 LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 5.5E-8 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 5.5E-8 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS17325 6f2a19e1edd36ab2ca29795cad0c6ea7 333 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 5.5E-8 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 47.366 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 SUPERFAMILY SSF52317 153 376 3.06E-61 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 SMART SM01097 3 133 9.7E-93 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 Pfam PF00117 Glutamine amidotransferase class-I 197 372 3.6E-45 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 1.2E-144 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 PANTHER PTHR11405 187 378 1.6E-243 T 23-04-2016 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 PANTHER PTHR11405 3 170 1.6E-243 T 23-04-2016 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 Gene3D G3DSA:3.50.30.20 3 143 2.5E-61 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 Gene3D G3DSA:3.40.50.880 154 376 2.1E-80 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 6.0E-39 T 23-04-2016 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 6.0E-39 T 23-04-2016 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 6.0E-39 T 23-04-2016 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 6.0E-39 T 23-04-2016 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 6.0E-39 T 23-04-2016 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 7.2E-11 T 23-04-2016 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 7.2E-11 T 23-04-2016 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 7.2E-11 T 23-04-2016 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.7E-52 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS12960 6af64f6de2e58286220628416ff005f9 378 SUPERFAMILY SSF52021 4 143 3.01E-57 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 Pfam PF08448 PAS fold 19 137 1.6E-8 T 23-04-2016 IPR013656 PAS fold-4 LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 Gene3D G3DSA:3.30.70.270 157 318 9.7E-54 T 23-04-2016 LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 143 5.2E-7 T 23-04-2016 IPR000014 PAS domain LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 PANTHER PTHR10799 188 313 9.1E-34 T 23-04-2016 LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 PANTHER PTHR10799 1 149 9.1E-34 T 23-04-2016 LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 151 315 6.1E-54 T 23-04-2016 IPR000160 GGDEF domain LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 SUPERFAMILY SSF55073 160 317 7.85E-51 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 SMART SM00267 144 316 1.9E-64 T 23-04-2016 IPR000160 GGDEF domain LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 SMART SM00091 11 77 1.5E-5 T 23-04-2016 IPR000014 PAS domain LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 SUPERFAMILY SSF55785 12 130 6.11E-13 T 23-04-2016 IPR000014 PAS domain LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 312 1.8E-46 T 23-04-2016 IPR000160 GGDEF domain LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 Gene3D G3DSA:3.30.450.20 13 131 1.4E-14 T 23-04-2016 LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 PANTHER PTHR10799:SF750 188 313 9.1E-34 T 23-04-2016 LT40_RS13135 0bb23d34995daa1929d5b62847f54b80 319 PANTHER PTHR10799:SF750 1 149 9.1E-34 T 23-04-2016 LT40_RS11325 6c8551052cb0e8f615110c8efc3ab6cc 206 Pfam PF04356 Protein of unknown function (DUF489) 6 197 4.1E-68 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 LT40_RS11325 6c8551052cb0e8f615110c8efc3ab6cc 206 PANTHER PTHR38100 1 206 7.8E-80 T 23-04-2016 LT40_RS11325 6c8551052cb0e8f615110c8efc3ab6cc 206 PANTHER PTHR38100:SF1 1 206 7.8E-80 T 23-04-2016 LT40_RS11325 6c8551052cb0e8f615110c8efc3ab6cc 206 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 196 1.0E-77 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 LT40_RS11325 6c8551052cb0e8f615110c8efc3ab6cc 206 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 205 32.413 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 LT40_RS11325 6c8551052cb0e8f615110c8efc3ab6cc 206 SUPERFAMILY SSF101322 1 205 2.09E-70 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 LT40_RS11325 6c8551052cb0e8f615110c8efc3ab6cc 206 Gene3D G3DSA:1.10.3890.10 1 204 1.6E-76 T 23-04-2016 IPR007451 Uncharacterised protein family UPF0274 LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 Gene3D G3DSA:3.30.70.920 54 137 6.2E-28 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 SUPERFAMILY SSF54909 63 149 2.82E-21 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 PANTHER PTHR30154:SF17 1 150 2.8E-64 T 23-04-2016 LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 Pfam PF01037 Lrp/AsnC ligand binding domain 69 140 2.2E-20 T 23-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 SUPERFAMILY SSF46785 2 91 2.09E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.4E-10 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.4E-10 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.4E-10 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 PANTHER PTHR30154 1 150 2.8E-64 T 23-04-2016 LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 SMART SM00344 1 110 5.7E-38 T 23-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 9.0E-16 T 23-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LT40_RS10360 d31c01c3f40a124af06d68454d7962e7 155 Gene3D G3DSA:1.10.10.10 2 53 1.3E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS06705 f07abb5c88bd46fb9f9f590e5d72619a 488 SUPERFAMILY SSF52540 1 237 2.98E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06705 f07abb5c88bd46fb9f9f590e5d72619a 488 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 484 210.486 T 23-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 LT40_RS06705 f07abb5c88bd46fb9f9f590e5d72619a 488 PANTHER PTHR21343:SF1 1 481 1.1E-224 T 23-04-2016 LT40_RS06705 f07abb5c88bd46fb9f9f590e5d72619a 488 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 250 433 3.5E-58 T 23-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 LT40_RS06705 f07abb5c88bd46fb9f9f590e5d72619a 488 PANTHER PTHR21343 1 481 1.1E-224 T 23-04-2016 LT40_RS06705 f07abb5c88bd46fb9f9f590e5d72619a 488 Gene3D G3DSA:3.40.50.300 1 235 7.5E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06705 f07abb5c88bd46fb9f9f590e5d72619a 488 Gene3D G3DSA:3.40.50.880 250 442 9.1E-30 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS06705 f07abb5c88bd46fb9f9f590e5d72619a 488 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 474 2.3E-145 T 23-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 LT40_RS06705 f07abb5c88bd46fb9f9f590e5d72619a 488 SUPERFAMILY SSF52317 250 442 3.3E-39 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS06705 f07abb5c88bd46fb9f9f590e5d72619a 488 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 231 2.0E-26 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LT40_RS15010 4d96cd74bd5ca7ad0a72ed3d50e3f467 186 Pfam PF13412 Winged helix-turn-helix DNA-binding 120 163 7.9E-7 T 23-04-2016 LT40_RS15010 4d96cd74bd5ca7ad0a72ed3d50e3f467 186 Gene3D G3DSA:1.10.10.10 118 181 8.8E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15010 4d96cd74bd5ca7ad0a72ed3d50e3f467 186 SUPERFAMILY SSF46785 119 181 6.15E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10485 fb083870250c506e072817c9eba6aad9 389 Pfam PF01757 Acyltransferase family 39 354 2.5E-24 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LT40_RS19095 a2d7c618a4d3b07306a1d935be69c058 217 Pfam PF06790 Uncharacterised protein family (UPF0259) 88 212 4.9E-7 T 23-04-2016 IPR009627 Uncharacterised protein family UPF0259 LT40_RS04560 f0e34de32783a11c303970ebf4376088 152 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 6 143 1.3E-19 T 23-04-2016 IPR009936 Protein of unknown function DUF1468 LT40_RS09720 39c08d4d6b4b3f29fe596392413df779 133 Pfam PF00576 HIUase/Transthyretin family 24 132 1.9E-37 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily LT40_RS09720 39c08d4d6b4b3f29fe596392413df779 133 PRINTS PR00189 Transthyretin signature 23 43 2.6E-11 T 23-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase LT40_RS09720 39c08d4d6b4b3f29fe596392413df779 133 PRINTS PR00189 Transthyretin signature 111 133 2.6E-11 T 23-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase LT40_RS09720 39c08d4d6b4b3f29fe596392413df779 133 PRINTS PR00189 Transthyretin signature 55 80 2.6E-11 T 23-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase LT40_RS09720 39c08d4d6b4b3f29fe596392413df779 133 SMART SM00095 19 132 2.3E-6 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily LT40_RS09720 39c08d4d6b4b3f29fe596392413df779 133 Gene3D G3DSA:2.60.40.180 20 133 8.2E-42 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily LT40_RS09720 39c08d4d6b4b3f29fe596392413df779 133 ProSitePatterns PS00769 Transthyretin signature 2. 116 128 - T 23-04-2016 IPR023419 Transthyretin, conserved site LT40_RS09720 39c08d4d6b4b3f29fe596392413df779 133 PANTHER PTHR10395 10 133 4.1E-44 T 23-04-2016 LT40_RS09720 39c08d4d6b4b3f29fe596392413df779 133 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 22 133 2.8E-43 T 23-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 LT40_RS09720 39c08d4d6b4b3f29fe596392413df779 133 PANTHER PTHR10395:SF7 10 133 4.1E-44 T 23-04-2016 LT40_RS09720 39c08d4d6b4b3f29fe596392413df779 133 SUPERFAMILY SSF49472 18 133 1.96E-42 T 23-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily LT40_RS05090 0d8955751dfb86c91dffa327ff0b5149 325 PANTHER PTHR30024:SF3 11 310 5.8E-102 T 23-04-2016 LT40_RS05090 0d8955751dfb86c91dffa327ff0b5149 325 PANTHER PTHR30024 11 310 5.8E-102 T 23-04-2016 LT40_RS05090 0d8955751dfb86c91dffa327ff0b5149 325 Gene3D G3DSA:3.40.190.10 110 215 5.1E-26 T 23-04-2016 LT40_RS05090 0d8955751dfb86c91dffa327ff0b5149 325 SUPERFAMILY SSF53850 45 251 4.19E-44 T 23-04-2016 LT40_RS05090 0d8955751dfb86c91dffa327ff0b5149 325 SMART SM00062 29 242 5.3E-5 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS05090 0d8955751dfb86c91dffa327ff0b5149 325 Pfam PF09084 NMT1/THI5 like 69 244 1.3E-16 T 23-04-2016 IPR015168 SsuA/THI5-like LT40_RS05090 0d8955751dfb86c91dffa327ff0b5149 325 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 30 310 7.2E-65 T 23-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 LT40_RS04885 b2d4f607a49d2bc5146487732d03b973 354 Hamap MF_01113 DNA polymerase IV [dinB]. 3 350 36.699 T 23-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS04885 b2d4f607a49d2bc5146487732d03b973 354 Pfam PF00817 impB/mucB/samB family 9 156 3.4E-52 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS04885 b2d4f607a49d2bc5146487732d03b973 354 Pfam PF11798 IMS family HHH motif 171 199 2.6E-7 T 23-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS04885 b2d4f607a49d2bc5146487732d03b973 354 PANTHER PTHR11076:SF32 4 340 5.4E-182 T 23-04-2016 LT40_RS04885 b2d4f607a49d2bc5146487732d03b973 354 PANTHER PTHR11076 4 340 5.4E-182 T 23-04-2016 LT40_RS04885 b2d4f607a49d2bc5146487732d03b973 354 SUPERFAMILY SSF56672 3 236 2.4E-92 T 23-04-2016 LT40_RS04885 b2d4f607a49d2bc5146487732d03b973 354 Gene3D G3DSA:1.10.150.20 167 237 3.0E-25 T 23-04-2016 LT40_RS04885 b2d4f607a49d2bc5146487732d03b973 354 Gene3D G3DSA:3.30.70.270 68 166 6.1E-35 T 23-04-2016 LT40_RS04885 b2d4f607a49d2bc5146487732d03b973 354 Gene3D G3DSA:3.30.1490.100 240 351 1.0E-32 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS04885 b2d4f607a49d2bc5146487732d03b973 354 SUPERFAMILY SSF100879 244 350 5.89E-21 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS00950 565cc23163d163039905cade333434a6 497 PANTHER PTHR34383 4 488 9.3E-259 T 23-04-2016 LT40_RS00950 565cc23163d163039905cade333434a6 497 TIGRFAM TIGR03708 poly_P_AMP_trns: polyphosphate:AMP phosphotransferase 2 490 2.4E-221 T 23-04-2016 IPR022489 Polyphosphate:AMP phosphotransferase GO:0006797|GO:0043751 LT40_RS00950 565cc23163d163039905cade333434a6 497 SUPERFAMILY SSF52540 301 489 1.59E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00950 565cc23163d163039905cade333434a6 497 Gene3D G3DSA:3.40.50.300 1 246 2.4E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00950 565cc23163d163039905cade333434a6 497 Gene3D G3DSA:3.40.50.300 254 495 2.0E-101 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00950 565cc23163d163039905cade333434a6 497 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 268 493 1.9E-92 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related LT40_RS00950 565cc23163d163039905cade333434a6 497 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 11 233 1.7E-50 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related LT40_RS00950 565cc23163d163039905cade333434a6 497 PANTHER PTHR34383:SF3 4 488 9.3E-259 T 23-04-2016 LT40_RS00950 565cc23163d163039905cade333434a6 497 SUPERFAMILY SSF52540 41 218 1.35E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14020 fec813d8014a0075001098585a7f0fb7 249 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 113 178 8.8E-19 T 23-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 LT40_RS14020 fec813d8014a0075001098585a7f0fb7 249 Gene3D G3DSA:1.10.10.10 12 111 3.1E-38 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS14020 fec813d8014a0075001098585a7f0fb7 249 Gene3D G3DSA:2.40.50.100 112 175 2.0E-24 T 23-04-2016 LT40_RS14020 fec813d8014a0075001098585a7f0fb7 249 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 79 2.7E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS14020 fec813d8014a0075001098585a7f0fb7 249 PIRSF PIRSF005763 1 249 1.2E-72 T 23-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 LT40_RS14020 fec813d8014a0075001098585a7f0fb7 249 SUPERFAMILY SSF50331 113 179 5.95E-17 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS14020 fec813d8014a0075001098585a7f0fb7 249 PANTHER PTHR30432 15 249 1.4E-41 T 23-04-2016 LT40_RS14020 fec813d8014a0075001098585a7f0fb7 249 SUPERFAMILY SSF46785 10 99 4.99E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS14020 fec813d8014a0075001098585a7f0fb7 249 Pfam PF03459 TOBE domain 115 177 1.0E-15 T 23-04-2016 IPR005116 Transport-associated OB, type 1 LT40_RS14020 fec813d8014a0075001098585a7f0fb7 249 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 15 103 1.8E-29 T 23-04-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal LT40_RS17220 99e73f96621939511628345b91de5738 157 Pfam PF13488 Glycine zipper 76 117 5.6E-5 T 23-04-2016 LT40_RS08380 0e0735e0e35829e085733ce96ff4c989 256 PANTHER PTHR19372 27 256 5.6E-121 T 23-04-2016 LT40_RS08380 0e0735e0e35829e085733ce96ff4c989 256 PANTHER PTHR19372:SF9 27 256 5.6E-121 T 23-04-2016 LT40_RS08380 0e0735e0e35829e085733ce96ff4c989 256 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 25 46 5.4E-6 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LT40_RS08380 0e0735e0e35829e085733ce96ff4c989 256 SUPERFAMILY SSF56524 50 255 1.03E-62 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LT40_RS08380 0e0735e0e35829e085733ce96ff4c989 256 Gene3D G3DSA:3.90.420.10 95 253 2.8E-50 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LT40_RS08380 0e0735e0e35829e085733ce96ff4c989 256 Pfam PF00174 Oxidoreductase molybdopterin binding domain 101 245 9.6E-30 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 LT40_RS07010 593eee4b32ec210c46322ac69ebd7fc1 299 PANTHER PTHR30537 1 296 3.3E-79 T 23-04-2016 LT40_RS07010 593eee4b32ec210c46322ac69ebd7fc1 299 Pfam PF03466 LysR substrate binding domain 94 277 2.2E-27 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS07010 593eee4b32ec210c46322ac69ebd7fc1 299 Gene3D G3DSA:1.10.10.10 4 87 1.5E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07010 593eee4b32ec210c46322ac69ebd7fc1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 1.2E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07010 593eee4b32ec210c46322ac69ebd7fc1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 1.2E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07010 593eee4b32ec210c46322ac69ebd7fc1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 1.2E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07010 593eee4b32ec210c46322ac69ebd7fc1 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 8.6E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07010 593eee4b32ec210c46322ac69ebd7fc1 299 SUPERFAMILY SSF53850 94 297 3.08E-30 T 23-04-2016 LT40_RS07010 593eee4b32ec210c46322ac69ebd7fc1 299 Gene3D G3DSA:3.40.190.10 96 192 5.0E-22 T 23-04-2016 LT40_RS07010 593eee4b32ec210c46322ac69ebd7fc1 299 PANTHER PTHR30537:SF26 1 296 3.3E-79 T 23-04-2016 LT40_RS07010 593eee4b32ec210c46322ac69ebd7fc1 299 SUPERFAMILY SSF46785 6 87 2.97E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03330 b8bb3c56a7f3cb4cbb97f162aca459a4 110 PANTHER PTHR36835 1 108 1.1E-35 T 23-04-2016 LT40_RS03330 b8bb3c56a7f3cb4cbb97f162aca459a4 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 2.3E-36 T 23-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 LT40_RS03330 b8bb3c56a7f3cb4cbb97f162aca459a4 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 93 8.1E-18 T 23-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 LT40_RS01035 e8e0fa01643816849f728cfdb3bc95a7 137 PANTHER PTHR11075 8 137 3.1E-41 T 23-04-2016 LT40_RS01035 e8e0fa01643816849f728cfdb3bc95a7 137 Pfam PF00472 RF-1 domain 6 132 8.4E-26 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LT40_RS01035 e8e0fa01643816849f728cfdb3bc95a7 137 Gene3D G3DSA:3.30.160.200 2 107 3.1E-34 T 23-04-2016 LT40_RS01035 e8e0fa01643816849f728cfdb3bc95a7 137 SUPERFAMILY SSF75620 7 105 2.59E-12 T 23-04-2016 LT40_RS06995 e87bbe64d9744e1c598beafe61e3f16c 223 Gene3D G3DSA:3.90.550.10 2 189 9.6E-21 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS06995 e87bbe64d9744e1c598beafe61e3f16c 223 Pfam PF00535 Glycosyl transferase family 2 4 131 6.5E-13 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS06995 e87bbe64d9744e1c598beafe61e3f16c 223 SUPERFAMILY SSF53448 2 199 3.28E-28 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS06995 e87bbe64d9744e1c598beafe61e3f16c 223 PANTHER PTHR22916 1 187 2.0E-15 T 23-04-2016 LT40_RS01790 84e58c9f459a41380519fe037c56530e 264 Gene3D G3DSA:3.10.129.10 183 258 3.5E-5 T 23-04-2016 IPR029069 HotDog domain LT40_RS01790 84e58c9f459a41380519fe037c56530e 264 Pfam PF13622 Thioesterase-like superfamily 20 262 4.4E-48 T 23-04-2016 LT40_RS01790 84e58c9f459a41380519fe037c56530e 264 SUPERFAMILY SSF54637 1 108 1.44E-24 T 23-04-2016 IPR029069 HotDog domain LT40_RS01790 84e58c9f459a41380519fe037c56530e 264 SUPERFAMILY SSF54637 128 262 1.16E-22 T 23-04-2016 IPR029069 HotDog domain LT40_RS01790 84e58c9f459a41380519fe037c56530e 264 Gene3D G3DSA:3.10.129.10 2 108 2.2E-19 T 23-04-2016 IPR029069 HotDog domain LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 Gene3D G3DSA:2.60.260.20 109 141 1.1E-21 T 23-04-2016 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 Gene3D G3DSA:2.60.260.20 211 254 1.1E-21 T 23-04-2016 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 PANTHER PTHR24078:SF231 1 370 8.6E-167 T 23-04-2016 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 SUPERFAMILY SSF46565 1 111 2.88E-36 T 23-04-2016 IPR001623 DnaJ domain LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 SUPERFAMILY SSF49493 114 169 2.22E-21 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 Pfam PF00684 DnaJ central domain 147 207 6.2E-15 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 Gene3D G3DSA:2.10.230.10 142 210 9.5E-25 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 Gene3D G3DSA:2.60.260.20 256 333 9.4E-24 T 23-04-2016 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 4.4E-139 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 Gene3D G3DSA:1.10.287.110 1 102 1.2E-36 T 23-04-2016 IPR001623 DnaJ domain LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 Pfam PF01556 DnaJ C terminal domain 121 333 1.0E-42 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 PRINTS PR00625 DnaJ domain signature 42 62 3.5E-31 T 23-04-2016 IPR001623 DnaJ domain LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 PRINTS PR00625 DnaJ domain signature 7 25 3.5E-31 T 23-04-2016 IPR001623 DnaJ domain LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 PRINTS PR00625 DnaJ domain signature 25 40 3.5E-31 T 23-04-2016 IPR001623 DnaJ domain LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 PRINTS PR00625 DnaJ domain signature 62 81 3.5E-31 T 23-04-2016 IPR001623 DnaJ domain LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 23-04-2016 IPR018253 DnaJ domain, conserved site LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 SUPERFAMILY SSF49493 213 267 2.22E-21 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 PANTHER PTHR24078 1 370 8.6E-167 T 23-04-2016 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 Pfam PF00226 DnaJ domain 5 67 9.7E-27 T 23-04-2016 IPR001623 DnaJ domain LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 SUPERFAMILY SSF49493 259 344 2.88E-23 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 SUPERFAMILY SSF57938 134 211 8.89E-23 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 SMART SM00271 4 62 2.2E-31 T 23-04-2016 IPR001623 DnaJ domain LT40_RS12970 601cb96c9b32eb0d3c264504e6f0fab2 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 42.348 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 LT40_RS12335 47fb1e5ea82fe84829c31501920adb14 204 PANTHER PTHR30462 9 202 1.4E-52 T 23-04-2016 LT40_RS12335 47fb1e5ea82fe84829c31501920adb14 204 Pfam PF04403 Paraquat-inducible protein A 45 198 9.7E-54 T 23-04-2016 IPR007498 Paraquat-inducible protein A LT40_RS12335 47fb1e5ea82fe84829c31501920adb14 204 PANTHER PTHR30462:SF3 9 202 1.4E-52 T 23-04-2016 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 Gene3D G3DSA:3.90.190.20 323 469 4.1E-53 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 Gene3D G3DSA:3.40.50.720 17 103 4.5E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 16 473 43.654 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 Pfam PF08245 Mur ligase middle domain 121 301 2.4E-28 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 SUPERFAMILY SSF53244 320 469 3.11E-46 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 SUPERFAMILY SSF51984 17 103 1.18E-28 T 23-04-2016 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 411 5.9E-21 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 SUPERFAMILY SSF53623 102 319 8.9E-74 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 PANTHER PTHR23135 11 461 1.0E-220 T 23-04-2016 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 Gene3D G3DSA:3.40.1190.10 105 322 8.3E-83 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 467 3.4E-168 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 Pfam PF01225 Mur ligase family, catalytic domain 18 116 1.2E-25 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 LT40_RS04060 3e6f96c9f532407be47b7257ddfdea74 481 PANTHER PTHR23135:SF5 11 461 1.0E-220 T 23-04-2016 LT40_RS13405 1bb4b0ba376f505173c381f195eaf55f 445 PANTHER PTHR11206 7 443 4.8E-128 T 23-04-2016 LT40_RS13405 1bb4b0ba376f505173c381f195eaf55f 445 Pfam PF01554 MatE 248 406 3.9E-14 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LT40_RS13405 1bb4b0ba376f505173c381f195eaf55f 445 Pfam PF01554 MatE 23 183 8.2E-25 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LT40_RS13405 1bb4b0ba376f505173c381f195eaf55f 445 PANTHER PTHR11206:SF94 7 443 4.8E-128 T 23-04-2016 LT40_RS13405 1bb4b0ba376f505173c381f195eaf55f 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 416 8.2E-77 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 LT40_RS05465 02dd8e7a3aac719e450c32c782764afd 381 Gene3D G3DSA:1.20.1250.20 193 369 1.8E-14 T 23-04-2016 LT40_RS05465 02dd8e7a3aac719e450c32c782764afd 381 Pfam PF07690 Major Facilitator Superfamily 4 331 3.7E-31 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS05465 02dd8e7a3aac719e450c32c782764afd 381 PANTHER PTHR23501:SF89 1 365 1.1E-200 T 23-04-2016 LT40_RS05465 02dd8e7a3aac719e450c32c782764afd 381 Gene3D G3DSA:1.20.1250.20 1 178 6.8E-23 T 23-04-2016 LT40_RS05465 02dd8e7a3aac719e450c32c782764afd 381 PANTHER PTHR23501 1 365 1.1E-200 T 23-04-2016 LT40_RS05465 02dd8e7a3aac719e450c32c782764afd 381 SUPERFAMILY SSF103473 1 372 1.01E-49 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS19290 d1f1fc818a95c91c4de89314f7b00ff1 335 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 212 3.7E-46 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LT40_RS19290 d1f1fc818a95c91c4de89314f7b00ff1 335 PANTHER PTHR30365:SF4 1 335 5.1E-181 T 23-04-2016 LT40_RS19290 d1f1fc818a95c91c4de89314f7b00ff1 335 PIRSF PIRSF000267 2 335 6.4E-93 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LT40_RS19290 d1f1fc818a95c91c4de89314f7b00ff1 335 PANTHER PTHR30365 1 335 5.1E-181 T 23-04-2016 LT40_RS19290 d1f1fc818a95c91c4de89314f7b00ff1 335 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 324 1.2E-102 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 Pfam PF00575 S1 RNA binding domain 647 718 1.1E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 SMART SM00732 323 422 3.6E-39 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 PANTHER PTHR10724 1 725 0.0 T 23-04-2016 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 PANTHER PTHR10724:SF1 1 725 0.0 T 23-04-2016 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 Gene3D G3DSA:2.40.50.140 637 718 2.2E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 Pfam PF09371 Tex-like protein N-terminal domain 8 191 8.9E-68 T 23-04-2016 IPR018974 Tex-like protein, N-terminal LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 Gene3D G3DSA:3.30.420.140 324 448 2.4E-54 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 SUPERFAMILY SSF158832 1 318 3.4E-120 T 23-04-2016 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 Gene3D G3DSA:1.10.3500.10 449 496 8.9E-100 T 23-04-2016 IPR023323 Tex-like domain LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 Gene3D G3DSA:1.10.3500.10 109 319 8.9E-100 T 23-04-2016 IPR023323 Tex-like domain LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 SMART SM00316 647 718 1.2E-23 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 Gene3D G3DSA:1.10.10.650 3 108 2.0E-47 T 23-04-2016 IPR023319 Tex-like protein, HTH domain LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 SUPERFAMILY SSF50249 636 721 1.72E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 SUPERFAMILY SSF47781 468 554 1.45E-26 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 SUPERFAMILY SSF53098 319 467 1.9E-54 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 Pfam PF16921 Tex protein YqgF-like domain 324 449 3.7E-54 T 23-04-2016 IPR032639 Tex protein, YqgF-like domain LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 SUPERFAMILY SSF47781 558 629 1.51E-18 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 Pfam PF12836 Helix-hairpin-helix motif 489 553 5.7E-28 T 23-04-2016 LT40_RS17170 44ce540d6ec83a63cece3d5b30dc747a 773 Gene3D G3DSA:1.10.150.310 497 628 5.5E-44 T 23-04-2016 IPR023097 Tex RuvX-like domain LT40_RS01625 314863596540123e791fcf735f6279b0 289 PANTHER PTHR11795:SF349 18 280 7.8E-71 T 23-04-2016 LT40_RS01625 314863596540123e791fcf735f6279b0 289 PANTHER PTHR11795 18 280 7.8E-71 T 23-04-2016 LT40_RS01625 314863596540123e791fcf735f6279b0 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 275 1.9E-32 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS08320 12b7e5687c6c0879260a7b57e07fce67 391 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 119 387 2.1E-91 T 23-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 LT40_RS08320 12b7e5687c6c0879260a7b57e07fce67 391 PANTHER PTHR11236:SF21 117 390 1.5E-119 T 23-04-2016 LT40_RS08320 12b7e5687c6c0879260a7b57e07fce67 391 SUPERFAMILY SSF56322 49 388 1.57E-86 T 23-04-2016 IPR005801 ADC synthase GO:0009058 LT40_RS08320 12b7e5687c6c0879260a7b57e07fce67 391 Pfam PF00425 chorismate binding enzyme 124 379 2.2E-68 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal LT40_RS08320 12b7e5687c6c0879260a7b57e07fce67 391 Gene3D G3DSA:3.60.120.10 94 388 3.5E-82 T 23-04-2016 IPR005801 ADC synthase GO:0009058 LT40_RS08320 12b7e5687c6c0879260a7b57e07fce67 391 PANTHER PTHR11236 117 390 1.5E-119 T 23-04-2016 LT40_RS09260 66055ed008e7d7a751c85322dab5e900 431 PANTHER PTHR23508:SF5 12 396 1.2E-156 T 23-04-2016 LT40_RS09260 66055ed008e7d7a751c85322dab5e900 431 SUPERFAMILY SSF103473 4 425 4.71E-56 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS09260 66055ed008e7d7a751c85322dab5e900 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS09260 66055ed008e7d7a751c85322dab5e900 431 Pfam PF07690 Major Facilitator Superfamily 62 386 6.6E-29 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS09260 66055ed008e7d7a751c85322dab5e900 431 Gene3D G3DSA:1.20.1250.20 35 220 3.7E-22 T 23-04-2016 LT40_RS09260 66055ed008e7d7a751c85322dab5e900 431 Gene3D G3DSA:1.20.1250.20 246 424 1.0E-7 T 23-04-2016 LT40_RS09260 66055ed008e7d7a751c85322dab5e900 431 PANTHER PTHR23508 12 396 1.2E-156 T 23-04-2016 LT40_RS00160 c9e8c16eb7cd948f0a402ee6ac2b7371 186 SUPERFAMILY SSF55021 94 181 8.7E-14 T 23-04-2016 LT40_RS00160 c9e8c16eb7cd948f0a402ee6ac2b7371 186 PANTHER PTHR34875:SF3 1 183 1.7E-47 T 23-04-2016 LT40_RS00160 c9e8c16eb7cd948f0a402ee6ac2b7371 186 SUPERFAMILY SSF55021 8 87 1.83E-10 T 23-04-2016 LT40_RS00160 c9e8c16eb7cd948f0a402ee6ac2b7371 186 PIRSF PIRSF028103 7 182 6.9E-57 T 23-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 LT40_RS00160 c9e8c16eb7cd948f0a402ee6ac2b7371 186 Gene3D G3DSA:3.30.70.260 8 86 9.4E-14 T 23-04-2016 LT40_RS00160 c9e8c16eb7cd948f0a402ee6ac2b7371 186 Gene3D G3DSA:3.30.70.260 98 183 1.9E-13 T 23-04-2016 LT40_RS00160 c9e8c16eb7cd948f0a402ee6ac2b7371 186 Pfam PF13740 ACT domain 9 82 4.3E-17 T 23-04-2016 LT40_RS00160 c9e8c16eb7cd948f0a402ee6ac2b7371 186 PANTHER PTHR34875 1 183 1.7E-47 T 23-04-2016 LT40_RS06730 bf9d8c1e01c2ad1f7ea079c0f72350ee 402 Pfam PF07690 Major Facilitator Superfamily 17 316 1.2E-29 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS06730 bf9d8c1e01c2ad1f7ea079c0f72350ee 402 Gene3D G3DSA:1.20.1250.20 211 393 4.4E-19 T 23-04-2016 LT40_RS06730 bf9d8c1e01c2ad1f7ea079c0f72350ee 402 Gene3D G3DSA:1.20.1250.20 10 187 2.2E-19 T 23-04-2016 LT40_RS06730 bf9d8c1e01c2ad1f7ea079c0f72350ee 402 PANTHER PTHR11360 4 396 2.9E-154 T 23-04-2016 LT40_RS06730 bf9d8c1e01c2ad1f7ea079c0f72350ee 402 PANTHER PTHR11360:SF115 4 396 2.9E-154 T 23-04-2016 LT40_RS06730 bf9d8c1e01c2ad1f7ea079c0f72350ee 402 SUPERFAMILY SSF103473 5 391 1.83E-55 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS15900 ac7141bba3c4dcdb6066f053e455ceb8 408 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 88 102 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LT40_RS15900 ac7141bba3c4dcdb6066f053e455ceb8 408 SUPERFAMILY SSF53686 10 396 8.25E-149 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS15900 ac7141bba3c4dcdb6066f053e455ceb8 408 PIRSF PIRSF001413 3 404 1.7E-159 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LT40_RS15900 ac7141bba3c4dcdb6066f053e455ceb8 408 PANTHER PTHR10314:SF3 14 398 2.8E-236 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LT40_RS15900 ac7141bba3c4dcdb6066f053e455ceb8 408 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 398 51.786 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LT40_RS15900 ac7141bba3c4dcdb6066f053e455ceb8 408 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 397 2.8E-191 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 LT40_RS15900 ac7141bba3c4dcdb6066f053e455ceb8 408 Gene3D G3DSA:3.40.50.1100 185 399 9.0E-97 T 23-04-2016 LT40_RS15900 ac7141bba3c4dcdb6066f053e455ceb8 408 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 385 1.2E-46 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LT40_RS15900 ac7141bba3c4dcdb6066f053e455ceb8 408 Gene3D G3DSA:3.40.50.1100 106 184 7.3E-21 T 23-04-2016 LT40_RS15900 ac7141bba3c4dcdb6066f053e455ceb8 408 PANTHER PTHR10314 14 398 2.8E-236 T 23-04-2016 LT40_RS03695 2bdc6769a222654646fb65216fe6b3e5 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.5E-16 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LT40_RS03695 2bdc6769a222654646fb65216fe6b3e5 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 22.44 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LT40_RS03695 2bdc6769a222654646fb65216fe6b3e5 95 PANTHER PTHR15004:SF0 7 95 1.8E-27 T 23-04-2016 LT40_RS03695 2bdc6769a222654646fb65216fe6b3e5 95 PANTHER PTHR15004 7 95 1.8E-27 T 23-04-2016 LT40_RS03695 2bdc6769a222654646fb65216fe6b3e5 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 3.2E-28 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LT40_RS03695 2bdc6769a222654646fb65216fe6b3e5 95 SUPERFAMILY SSF141000 4 93 7.19E-27 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PANTHER PTHR24322:SF392 7 136 1.4E-61 T 23-04-2016 LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PANTHER PTHR24322:SF392 152 184 1.4E-61 T 23-04-2016 LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 Gene3D G3DSA:3.40.50.720 4 233 5.4E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PANTHER PTHR24322 7 136 1.4E-61 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PANTHER PTHR24322 152 184 1.4E-61 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 5.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 5.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.2E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 187 2.0E-4 T 23-04-2016 LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 Pfam PF00106 short chain dehydrogenase 4 190 3.3E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 SUPERFAMILY SSF51735 3 233 5.75E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.2E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.2E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS19040 59d29314b43c0368342118acbeb08efe 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.2E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10300 ad91d13c90409aebc12c02b0359345a4 63 Pfam PF09489 Probable cobalt transporter subunit (CbtB) 17 63 3.0E-20 T 23-04-2016 IPR012667 Cobalt transporter subunit CbtB, putative LT40_RS10300 ad91d13c90409aebc12c02b0359345a4 63 TIGRFAM TIGR02459 CbtB: cobalt transporter subunit CbtB (proposed) 14 63 2.6E-24 T 23-04-2016 IPR012667 Cobalt transporter subunit CbtB, putative LT40_RS19840 72a885206cf6c83b1056953e0261a4a0 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 274 45.47 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 LT40_RS19840 72a885206cf6c83b1056953e0261a4a0 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 18 274 2.8E-76 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 LT40_RS19840 72a885206cf6c83b1056953e0261a4a0 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 179 185 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LT40_RS19840 72a885206cf6c83b1056953e0261a4a0 276 PANTHER PTHR18895 1 273 6.2E-106 T 23-04-2016 LT40_RS19840 72a885206cf6c83b1056953e0261a4a0 276 Gene3D G3DSA:1.10.8.10 13 83 1.1E-24 T 23-04-2016 LT40_RS19840 72a885206cf6c83b1056953e0261a4a0 276 Gene3D G3DSA:3.40.50.150 86 273 3.0E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS19840 72a885206cf6c83b1056953e0261a4a0 276 SUPERFAMILY SSF53335 12 272 1.4E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS19840 72a885206cf6c83b1056953e0261a4a0 276 PANTHER PTHR18895:SF64 1 273 6.2E-106 T 23-04-2016 LT40_RS19840 72a885206cf6c83b1056953e0261a4a0 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 22 270 8.0E-91 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 LT40_RS19840 72a885206cf6c83b1056953e0261a4a0 276 Pfam PF13847 Methyltransferase domain 109 244 1.8E-17 T 23-04-2016 IPR025714 Methyltransferase domain LT40_RS17745 1262de3d6b3131eaf0523f3b28ee2c23 737 SUPERFAMILY SSF50985 443 687 6.02E-30 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II LT40_RS17745 1262de3d6b3131eaf0523f3b28ee2c23 737 Gene3D G3DSA:2.130.10.30 562 722 4.2E-18 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II LT40_RS17745 1262de3d6b3131eaf0523f3b28ee2c23 737 Gene3D G3DSA:2.130.10.30 402 561 1.7E-16 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II LT40_RS18435 9f8f983512a0a4635e1b3ead1e404dcd 116 SUPERFAMILY SSF53137 4 114 9.81E-50 T 23-04-2016 LT40_RS18435 9f8f983512a0a4635e1b3ead1e404dcd 116 PANTHER PTHR12899 3 116 6.0E-39 T 23-04-2016 LT40_RS18435 9f8f983512a0a4635e1b3ead1e404dcd 116 Gene3D G3DSA:3.30.420.100 24 116 7.2E-39 T 23-04-2016 LT40_RS18435 9f8f983512a0a4635e1b3ead1e404dcd 116 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 116 4.7E-41 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18435 9f8f983512a0a4635e1b3ead1e404dcd 116 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 116 26.452 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18435 9f8f983512a0a4635e1b3ead1e404dcd 116 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 4 116 5.0E-41 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 SUPERFAMILY SSF103473 18 472 6.93E-75 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 Pfam PF00083 Sugar (and other) transporter 32 472 3.5E-117 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 PANTHER PTHR23500 32 474 1.5E-168 T 23-04-2016 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 PANTHER PTHR23500:SF141 32 474 1.5E-168 T 23-04-2016 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 PRINTS PR00171 Sugar transporter signature 40 50 9.4E-20 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 PRINTS PR00171 Sugar transporter signature 128 147 9.4E-20 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 PRINTS PR00171 Sugar transporter signature 399 411 9.4E-20 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 PRINTS PR00171 Sugar transporter signature 287 297 9.4E-20 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 PRINTS PR00171 Sugar transporter signature 376 397 9.4E-20 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 28 470 7.9E-112 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 Gene3D G3DSA:1.20.1250.20 34 231 6.9E-23 T 23-04-2016 LT40_RS07415 24e123c1a047c87f715df705ccb9eb1c 486 Gene3D G3DSA:1.20.1250.20 277 472 1.3E-22 T 23-04-2016 LT40_RS06665 89362937ef740a5ea3b5f5032f80cc83 211 SUPERFAMILY SSF54001 72 200 1.63E-36 T 23-04-2016 LT40_RS06665 89362937ef740a5ea3b5f5032f80cc83 211 Pfam PF00877 NlpC/P60 family 88 197 1.3E-27 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS06665 89362937ef740a5ea3b5f5032f80cc83 211 PANTHER PTHR21666 77 198 9.8E-33 T 23-04-2016 LT40_RS06665 89362937ef740a5ea3b5f5032f80cc83 211 Gene3D G3DSA:3.90.1720.10 77 202 2.7E-40 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS05470 9cf7df2ec068ca29622115d7e8bf7aa0 170 Gene3D G3DSA:1.10.10.10 109 164 7.0E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05470 9cf7df2ec068ca29622115d7e8bf7aa0 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 164 5.2E-22 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS05470 9cf7df2ec068ca29622115d7e8bf7aa0 170 Gene3D G3DSA:1.10.1740.10 8 81 1.2E-12 T 23-04-2016 LT40_RS05470 9cf7df2ec068ca29622115d7e8bf7aa0 170 PANTHER PTHR30173 8 164 1.3E-37 T 23-04-2016 LT40_RS05470 9cf7df2ec068ca29622115d7e8bf7aa0 170 SUPERFAMILY SSF88659 107 164 1.24E-13 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS05470 9cf7df2ec068ca29622115d7e8bf7aa0 170 Pfam PF08281 Sigma-70, region 4 112 164 1.8E-16 T 23-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS05470 9cf7df2ec068ca29622115d7e8bf7aa0 170 PANTHER PTHR30173:SF9 8 164 1.3E-37 T 23-04-2016 LT40_RS05470 9cf7df2ec068ca29622115d7e8bf7aa0 170 SUPERFAMILY SSF88946 7 99 5.89E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS05470 9cf7df2ec068ca29622115d7e8bf7aa0 170 Pfam PF04542 Sigma-70 region 2 15 81 3.8E-11 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LT40_RS12245 730102619ccc830e02f35d93a41543c9 365 Gene3D G3DSA:3.20.20.70 27 360 8.8E-131 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS12245 730102619ccc830e02f35d93a41543c9 365 Pfam PF00793 DAHP synthetase I family 59 352 1.2E-81 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LT40_RS12245 730102619ccc830e02f35d93a41543c9 365 PANTHER PTHR21225:SF5 30 359 3.9E-183 T 23-04-2016 LT40_RS12245 730102619ccc830e02f35d93a41543c9 365 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 23 356 5.6E-130 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LT40_RS12245 730102619ccc830e02f35d93a41543c9 365 PANTHER PTHR21225 30 359 3.9E-183 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LT40_RS12245 730102619ccc830e02f35d93a41543c9 365 PIRSF PIRSF001361 10 365 6.4E-142 T 23-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 LT40_RS12245 730102619ccc830e02f35d93a41543c9 365 SUPERFAMILY SSF51569 27 357 3.56E-119 T 23-04-2016 LT40_RS12215 c53b87d5be0427991c0977e79ec96d6d 186 PANTHER PTHR14269 1 179 8.1E-92 T 23-04-2016 LT40_RS12215 c53b87d5be0427991c0977e79ec96d6d 186 PIRSF PIRSF000847 1 186 8.5E-52 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LT40_RS12215 c53b87d5be0427991c0977e79ec96d6d 186 PANTHER PTHR14269:SF13 1 179 8.1E-92 T 23-04-2016 LT40_RS12215 c53b87d5be0427991c0977e79ec96d6d 186 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 179 8.9E-59 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LT40_RS12215 c53b87d5be0427991c0977e79ec96d6d 186 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 9.3E-19 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LT40_RS12215 c53b87d5be0427991c0977e79ec96d6d 186 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LT40_RS00255 1eb5668beb2b4b2594de4460d806d83c 388 PANTHER PTHR10009 84 384 1.8E-29 T 23-04-2016 IPR017996 Major royal jelly protein/Protein yellow LT40_RS00255 1eb5668beb2b4b2594de4460d806d83c 388 Pfam PF03022 Major royal jelly protein 108 347 3.0E-22 T 23-04-2016 IPR017996 Major royal jelly protein/Protein yellow LT40_RS00255 1eb5668beb2b4b2594de4460d806d83c 388 SUPERFAMILY SSF63829 107 212 1.11E-21 T 23-04-2016 LT40_RS00255 1eb5668beb2b4b2594de4460d806d83c 388 SUPERFAMILY SSF63829 242 357 1.11E-21 T 23-04-2016 LT40_RS00255 1eb5668beb2b4b2594de4460d806d83c 388 Gene3D G3DSA:2.120.10.30 38 382 1.3E-95 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 PANTHER PTHR24221 41 81 1.4E-225 T 23-04-2016 LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 PANTHER PTHR24221 139 707 1.4E-225 T 23-04-2016 LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 SUPERFAMILY SSF52540 474 707 6.35E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 SUPERFAMILY SSF90123 156 466 4.71E-51 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 Pfam PF00005 ABC transporter 500 649 1.5E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 Gene3D G3DSA:3.40.50.300 482 708 1.4E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 20 713 1.1E-292 T 23-04-2016 IPR017750 ATPase, type I secretion system LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 PANTHER PTHR24221:SF248 139 707 1.4E-225 T 23-04-2016 LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 SMART SM00382 509 695 2.1E-20 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 Gene3D G3DSA:3.90.70.10 17 140 5.2E-37 T 23-04-2016 LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 Gene3D G3DSA:1.20.1560.10 156 466 1.5E-50 T 23-04-2016 LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 Pfam PF00664 ABC transporter transmembrane region 172 430 5.1E-20 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS15485 c2326ae907c3f7574435e9a83f84d366 717 PANTHER PTHR24221:SF248 41 81 1.4E-225 T 23-04-2016 LT40_RS18130 ed71cbf5ad1993619008883d9a7d83af 371 Gene3D G3DSA:3.40.50.300 4 249 2.1E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18130 ed71cbf5ad1993619008883d9a7d83af 371 SUPERFAMILY SSF52540 12 251 1.5E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18130 ed71cbf5ad1993619008883d9a7d83af 371 Pfam PF08402 TOBE domain 288 365 5.2E-18 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LT40_RS18130 ed71cbf5ad1993619008883d9a7d83af 371 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS18130 ed71cbf5ad1993619008883d9a7d83af 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 44 357 1.7E-114 T 23-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 LT40_RS18130 ed71cbf5ad1993619008883d9a7d83af 371 SMART SM00382 38 221 3.8E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS18130 ed71cbf5ad1993619008883d9a7d83af 371 Pfam PF00005 ABC transporter 30 171 4.6E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS18130 ed71cbf5ad1993619008883d9a7d83af 371 PANTHER PTHR24220 14 363 6.5E-216 T 23-04-2016 LT40_RS18130 ed71cbf5ad1993619008883d9a7d83af 371 SUPERFAMILY SSF50331 246 365 4.19E-19 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS18130 ed71cbf5ad1993619008883d9a7d83af 371 PANTHER PTHR24220:SF402 14 363 6.5E-216 T 23-04-2016 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 SUPERFAMILY SSF100920 385 540 3.27E-58 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 Gene3D G3DSA:3.90.640.10 231 316 8.5E-31 T 23-04-2016 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 SUPERFAMILY SSF100934 508 604 4.19E-24 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 SUPERFAMILY SSF53067 1 184 4.66E-64 T 23-04-2016 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 Gene3D G3DSA:3.30.420.40 320 361 1.3E-32 T 23-04-2016 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 Gene3D G3DSA:3.30.420.40 194 230 1.3E-32 T 23-04-2016 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 Gene3D G3DSA:2.60.34.10 391 532 1.8E-68 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 PRINTS PR00301 70kDa heat shock protein signature 389 408 1.4E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 PRINTS PR00301 70kDa heat shock protein signature 470 486 1.4E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 PRINTS PR00301 70kDa heat shock protein signature 335 351 1.4E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 PRINTS PR00301 70kDa heat shock protein signature 139 159 1.4E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.4E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.4E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.4E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 PRINTS PR00301 70kDa heat shock protein signature 366 386 1.4E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 PRINTS PR00301 70kDa heat shock protein signature 199 209 1.4E-79 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 SUPERFAMILY SSF53067 188 383 5.25E-68 T 23-04-2016 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 PANTHER PTHR19375 2 640 0.0 T 23-04-2016 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 PANTHER PTHR19375:SF173 2 640 0.0 T 23-04-2016 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 Gene3D G3DSA:3.30.30.30 53 109 1.8E-26 T 23-04-2016 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 636 36.241 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 Gene3D G3DSA:1.20.1270.10 533 604 1.3E-27 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 Gene3D G3DSA:3.30.420.40 4 52 9.4E-64 T 23-04-2016 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 Gene3D G3DSA:3.30.420.40 120 193 9.4E-64 T 23-04-2016 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 Pfam PF00012 Hsp70 protein 4 604 6.2E-256 T 23-04-2016 IPR013126 Heat shock protein 70 family LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 604 2.9E-284 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 LT40_RS12975 8c5214e7b1ab00d158c7efaefd0fdf28 640 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site LT40_RS06735 3089f8a3400892ee61a39ff7b43bee13 420 PANTHER PTHR35093:SF2 1 420 5.1E-130 T 23-04-2016 LT40_RS06735 3089f8a3400892ee61a39ff7b43bee13 420 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 15 420 4.7E-113 T 23-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) LT40_RS06735 3089f8a3400892ee61a39ff7b43bee13 420 PANTHER PTHR35093 1 420 5.1E-130 T 23-04-2016 LT40_RS06735 3089f8a3400892ee61a39ff7b43bee13 420 SUPERFAMILY SSF56935 24 420 7.94E-96 T 23-04-2016 LT40_RS06735 3089f8a3400892ee61a39ff7b43bee13 420 Gene3D G3DSA:2.40.160.60 24 420 2.5E-123 T 23-04-2016 LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 Gene3D G3DSA:3.40.228.10 192 403 3.9E-56 T 23-04-2016 LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 PANTHER PTHR11615:SF114 280 778 7.6E-302 T 23-04-2016 LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 PANTHER PTHR11615 280 778 7.6E-302 T 23-04-2016 LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 PANTHER PTHR11615 1 261 7.6E-302 T 23-04-2016 LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 PANTHER PTHR11615:SF114 1 261 7.6E-302 T 23-04-2016 LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 SUPERFAMILY SSF53706 56 639 1.01E-147 T 23-04-2016 LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 22 770 8.4E-290 T 23-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 SUPERFAMILY SSF50692 656 771 2.34E-10 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 PIRSF PIRSF000144 3 775 0.0 T 23-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 Gene3D G3DSA:3.40.50.740 404 634 2.0E-56 T 23-04-2016 LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 Gene3D G3DSA:3.40.50.740 118 191 2.0E-56 T 23-04-2016 LT40_RS17225 06092e07a9cc0b5e32e4e23c86564627 778 Pfam PF00384 Molybdopterin oxidoreductase 118 500 2.8E-29 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 PANTHER PTHR11732 1 277 7.8E-134 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 PIRSF PIRSF000097 1 273 5.7E-84 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 125 142 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 230 245 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 SUPERFAMILY SSF51430 7 265 6.81E-92 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 Gene3D G3DSA:3.20.20.100 6 273 2.2E-101 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 Pfam PF00248 Aldo/keto reductase family 18 260 1.2E-49 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 PRINTS PR00069 Aldo-keto reductase signature 159 188 3.1E-46 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 PRINTS PR00069 Aldo-keto reductase signature 93 111 3.1E-46 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 PRINTS PR00069 Aldo-keto reductase signature 197 221 3.1E-46 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 PRINTS PR00069 Aldo-keto reductase signature 125 142 3.1E-46 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS10740 a90dceabe20b81b67aa1508df4903d11 278 PRINTS PR00069 Aldo-keto reductase signature 37 61 3.1E-46 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS07760 765a20c581c86277bba95f4bfb7070d5 347 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 275 344 4.8E-13 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) LT40_RS07760 765a20c581c86277bba95f4bfb7070d5 347 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 188 241 7.3E-6 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) LT40_RS07760 765a20c581c86277bba95f4bfb7070d5 347 PRINTS PR00956 Flagellar motor switch protein FliN signature 291 307 3.4E-5 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LT40_RS07760 765a20c581c86277bba95f4bfb7070d5 347 PRINTS PR00956 Flagellar motor switch protein FliN signature 320 335 3.4E-5 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LT40_RS07760 765a20c581c86277bba95f4bfb7070d5 347 PRINTS PR00956 Flagellar motor switch protein FliN signature 274 290 3.4E-5 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 LT40_RS07760 765a20c581c86277bba95f4bfb7070d5 347 SUPERFAMILY SSF101801 274 344 8.63E-14 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) LT40_RS07760 765a20c581c86277bba95f4bfb7070d5 347 SUPERFAMILY SSF101801 186 242 1.57E-6 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) LT40_RS07760 765a20c581c86277bba95f4bfb7070d5 347 Gene3D G3DSA:2.30.330.10 187 236 6.8E-5 T 23-04-2016 LT40_RS07760 765a20c581c86277bba95f4bfb7070d5 347 Gene3D G3DSA:2.30.330.10 273 345 1.1E-14 T 23-04-2016 LT40_RS14630 b4e3d5d2f2f7f31e493b6cd0d7275ce3 395 PANTHER PTHR13932:SF7 17 394 5.2E-199 T 23-04-2016 LT40_RS14630 b4e3d5d2f2f7f31e493b6cd0d7275ce3 395 PANTHER PTHR13932 17 394 5.2E-199 T 23-04-2016 LT40_RS14630 b4e3d5d2f2f7f31e493b6cd0d7275ce3 395 Pfam PF06969 HemN C-terminal domain 320 383 3.4E-13 T 23-04-2016 IPR010723 HemN, C-terminal LT40_RS14630 b4e3d5d2f2f7f31e493b6cd0d7275ce3 395 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 24 365 7.7E-120 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- LT40_RS14630 b4e3d5d2f2f7f31e493b6cd0d7275ce3 395 SMART SM00729 22 238 1.1E-57 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LT40_RS14630 b4e3d5d2f2f7f31e493b6cd0d7275ce3 395 SUPERFAMILY SSF102114 21 394 1.09E-109 T 23-04-2016 LT40_RS14630 b4e3d5d2f2f7f31e493b6cd0d7275ce3 395 Gene3D G3DSA:3.80.30.20 24 253 3.8E-32 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe LT40_RS14630 b4e3d5d2f2f7f31e493b6cd0d7275ce3 395 Pfam PF04055 Radical SAM superfamily 27 194 1.6E-20 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS11975 59da8d3212df9c87cb5efbff77cb163c 253 Gene3D G3DSA:3.40.50.300 4 238 1.6E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11975 59da8d3212df9c87cb5efbff77cb163c 253 SUPERFAMILY SSF52540 4 237 1.34E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11975 59da8d3212df9c87cb5efbff77cb163c 253 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS11975 59da8d3212df9c87cb5efbff77cb163c 253 SMART SM00382 29 215 1.3E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS11975 59da8d3212df9c87cb5efbff77cb163c 253 PANTHER PTHR24220:SF327 6 241 8.5E-122 T 23-04-2016 LT40_RS11975 59da8d3212df9c87cb5efbff77cb163c 253 Pfam PF00005 ABC transporter 20 167 4.6E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS11975 59da8d3212df9c87cb5efbff77cb163c 253 PIRSF PIRSF039085 1 243 3.0E-103 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS11975 59da8d3212df9c87cb5efbff77cb163c 253 PANTHER PTHR24220 6 241 8.5E-122 T 23-04-2016 LT40_RS09030 b36d951c728c3d181c18d74c4dafdfe3 344 PANTHER PTHR11695 26 343 8.1E-168 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS09030 b36d951c728c3d181c18d74c4dafdfe3 344 SMART SM00829 21 339 1.6E-6 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LT40_RS09030 b36d951c728c3d181c18d74c4dafdfe3 344 SUPERFAMILY SSF50129 6 146 4.5E-45 T 23-04-2016 IPR011032 GroES-like LT40_RS09030 b36d951c728c3d181c18d74c4dafdfe3 344 PANTHER PTHR11695:SF557 26 343 8.1E-168 T 23-04-2016 LT40_RS09030 b36d951c728c3d181c18d74c4dafdfe3 344 Pfam PF16884 N-terminal domain of oxidoreductase 10 115 1.3E-43 T 23-04-2016 LT40_RS09030 b36d951c728c3d181c18d74c4dafdfe3 344 Gene3D G3DSA:3.40.50.720 143 309 5.5E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09030 b36d951c728c3d181c18d74c4dafdfe3 344 Pfam PF00107 Zinc-binding dehydrogenase 161 286 8.4E-18 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LT40_RS09030 b36d951c728c3d181c18d74c4dafdfe3 344 Gene3D G3DSA:3.90.180.10 7 142 3.6E-57 T 23-04-2016 IPR011032 GroES-like LT40_RS09030 b36d951c728c3d181c18d74c4dafdfe3 344 SUPERFAMILY SSF50129 294 340 4.71E-6 T 23-04-2016 IPR011032 GroES-like LT40_RS09030 b36d951c728c3d181c18d74c4dafdfe3 344 SUPERFAMILY SSF51735 126 307 5.85E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06125 ca0d8c2ae95b6465041e3d12f6191f24 232 Gene3D G3DSA:3.40.50.150 19 215 5.5E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS06125 ca0d8c2ae95b6465041e3d12f6191f24 232 PANTHER PTHR10108 2 228 1.9E-145 T 23-04-2016 LT40_RS06125 ca0d8c2ae95b6465041e3d12f6191f24 232 PANTHER PTHR10108:SF910 2 228 1.9E-145 T 23-04-2016 LT40_RS06125 ca0d8c2ae95b6465041e3d12f6191f24 232 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 225 5.4E-88 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 LT40_RS06125 ca0d8c2ae95b6465041e3d12f6191f24 232 Pfam PF13489 Methyltransferase domain 45 199 3.5E-24 T 23-04-2016 LT40_RS06125 ca0d8c2ae95b6465041e3d12f6191f24 232 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 6 231 38.515 T 23-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 LT40_RS06125 ca0d8c2ae95b6465041e3d12f6191f24 232 SUPERFAMILY SSF53335 12 226 9.28E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 Pfam PF03466 LysR substrate binding domain 88 295 6.7E-44 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 SUPERFAMILY SSF46785 1 85 1.43E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 Gene3D G3DSA:1.10.10.10 1 83 9.0E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.6E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 SUPERFAMILY SSF53850 88 295 7.93E-38 T 23-04-2016 LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 PANTHER PTHR30346 1 295 4.5E-109 T 23-04-2016 LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 PANTHER PTHR30346:SF15 1 295 4.5E-109 T 23-04-2016 LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 Gene3D G3DSA:3.40.190.10 93 173 2.4E-14 T 23-04-2016 LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 Gene3D G3DSA:3.40.190.10 174 272 8.0E-29 T 23-04-2016 LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16445 1b9b1c939735a66beb12f58ac39743d3 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS18070 8db9fc0e7def3b23a7f7877f8b000d19 293 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 260 1.2E-93 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 LT40_RS18070 8db9fc0e7def3b23a7f7877f8b000d19 293 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 272 47.962 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 LT40_RS18070 8db9fc0e7def3b23a7f7877f8b000d19 293 Gene3D G3DSA:3.60.21.10 1 132 1.0E-54 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS18070 8db9fc0e7def3b23a7f7877f8b000d19 293 Gene3D G3DSA:3.60.21.10 170 269 1.0E-54 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS18070 8db9fc0e7def3b23a7f7877f8b000d19 293 PANTHER PTHR24032:SF27 1 266 2.6E-134 T 23-04-2016 LT40_RS18070 8db9fc0e7def3b23a7f7877f8b000d19 293 PIRSF PIRSF000903 1 275 5.0E-117 T 23-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 LT40_RS18070 8db9fc0e7def3b23a7f7877f8b000d19 293 SUPERFAMILY SSF56300 1 257 5.84E-57 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS18070 8db9fc0e7def3b23a7f7877f8b000d19 293 Pfam PF00149 Calcineurin-like phosphoesterase 2 149 7.5E-12 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LT40_RS18070 8db9fc0e7def3b23a7f7877f8b000d19 293 PANTHER PTHR24032 1 266 2.6E-134 T 23-04-2016 LT40_RS18745 a934c68c06d3e6718a849c2eebaf300e 209 SUPERFAMILY SSF52507 6 202 7.59E-60 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 LT40_RS18745 a934c68c06d3e6718a849c2eebaf300e 209 PANTHER PTHR30108 77 208 4.5E-87 T 23-04-2016 LT40_RS18745 a934c68c06d3e6718a849c2eebaf300e 209 PANTHER PTHR30108 1 60 4.5E-87 T 23-04-2016 LT40_RS18745 a934c68c06d3e6718a849c2eebaf300e 209 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 36.38 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 LT40_RS18745 a934c68c06d3e6718a849c2eebaf300e 209 PANTHER PTHR30108:SF2 77 208 4.5E-87 T 23-04-2016 LT40_RS18745 a934c68c06d3e6718a849c2eebaf300e 209 PANTHER PTHR30108:SF2 1 60 4.5E-87 T 23-04-2016 LT40_RS18745 a934c68c06d3e6718a849c2eebaf300e 209 Gene3D G3DSA:3.40.50.1950 6 204 1.3E-75 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 LT40_RS18745 a934c68c06d3e6718a849c2eebaf300e 209 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 6 200 1.7E-61 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 LT40_RS18745 a934c68c06d3e6718a849c2eebaf300e 209 Pfam PF02441 Flavoprotein 6 144 2.9E-26 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 LT40_RS05965 5519839a66267baa5cfdf4393990a3c8 284 PANTHER PTHR10992:SF909 6 283 9.3E-47 T 23-04-2016 LT40_RS05965 5519839a66267baa5cfdf4393990a3c8 284 SUPERFAMILY SSF53474 8 266 2.59E-47 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS05965 5519839a66267baa5cfdf4393990a3c8 284 Pfam PF00561 alpha/beta hydrolase fold 29 264 9.4E-20 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS05965 5519839a66267baa5cfdf4393990a3c8 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 1.9E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS05965 5519839a66267baa5cfdf4393990a3c8 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 1.9E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS05965 5519839a66267baa5cfdf4393990a3c8 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 1.9E-8 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS05965 5519839a66267baa5cfdf4393990a3c8 284 Gene3D G3DSA:3.40.50.1820 6 277 1.4E-48 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS05965 5519839a66267baa5cfdf4393990a3c8 284 PANTHER PTHR10992 6 283 9.3E-47 T 23-04-2016 LT40_RS09855 15cf68aba2aaa11a7859352a400bf956 348 Gene3D G3DSA:3.40.50.2000 183 313 1.5E-17 T 23-04-2016 LT40_RS09855 15cf68aba2aaa11a7859352a400bf956 348 Pfam PF00534 Glycosyl transferases group 1 182 312 3.6E-17 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS09855 15cf68aba2aaa11a7859352a400bf956 348 Pfam PF13439 Glycosyltransferase Family 4 18 169 8.7E-17 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LT40_RS09855 15cf68aba2aaa11a7859352a400bf956 348 PANTHER PTHR12526 16 347 1.1E-34 T 23-04-2016 LT40_RS09855 15cf68aba2aaa11a7859352a400bf956 348 SUPERFAMILY SSF53756 14 344 3.64E-56 T 23-04-2016 LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 Gene3D G3DSA:2.40.30.110 279 357 4.9E-26 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 PANTHER PTHR13847 5 353 7.6E-55 T 23-04-2016 LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 350 3.2E-19 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 355 42.722 T 23-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 Gene3D G3DSA:3.30.70.1400 51 135 2.7E-32 T 23-04-2016 LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 PIRSF PIRSF006487 1 358 1.2E-77 T 23-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 SUPERFAMILY SSF103025 3 276 6.17E-87 T 23-04-2016 LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 354 3.0E-119 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 SUPERFAMILY SSF101790 273 357 2.29E-23 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 PANTHER PTHR13847:SF5 5 353 7.6E-55 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 250 7.3E-81 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal LT40_RS16955 26befc8dd49243ade5602419e70b8264 360 Gene3D G3DSA:3.30.1360.120 139 230 4.9E-23 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LT40_RS03515 6c2afd1b2c5e7aac8c8d97e3ce6e29ec 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 91 1.3E-12 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS03515 6c2afd1b2c5e7aac8c8d97e3ce6e29ec 113 PANTHER PTHR23426 7 110 1.1E-36 T 23-04-2016 LT40_RS03515 6c2afd1b2c5e7aac8c8d97e3ce6e29ec 113 Gene3D G3DSA:3.10.20.30 1 101 2.1E-33 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS03515 6c2afd1b2c5e7aac8c8d97e3ce6e29ec 113 SUPERFAMILY SSF54292 5 107 3.38E-30 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS03515 6c2afd1b2c5e7aac8c8d97e3ce6e29ec 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 7.6E-56 T 23-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 LT40_RS03515 6c2afd1b2c5e7aac8c8d97e3ce6e29ec 113 PRINTS PR00355 Adrenodoxin signature 83 91 4.2E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 LT40_RS03515 6c2afd1b2c5e7aac8c8d97e3ce6e29ec 113 PRINTS PR00355 Adrenodoxin signature 42 52 4.2E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 LT40_RS03515 6c2afd1b2c5e7aac8c8d97e3ce6e29ec 113 PRINTS PR00355 Adrenodoxin signature 60 74 4.2E-8 T 23-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 LT40_RS11655 6909e7ab76ffdb5f54dc334176237ade 465 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 18 437 1.6E-43 T 23-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 LT40_RS11655 6909e7ab76ffdb5f54dc334176237ade 465 PANTHER PTHR31806 11 463 1.4E-86 T 23-04-2016 LT40_RS11655 6909e7ab76ffdb5f54dc334176237ade 465 PIRSF PIRSF002744 1 462 5.5E-97 T 23-04-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 LT40_RS10030 d8fa3e76b48f5967552267accd85e532 229 SUPERFAMILY SSF54060 22 222 7.06E-83 T 23-04-2016 LT40_RS10030 d8fa3e76b48f5967552267accd85e532 229 Pfam PF04231 Endonuclease I 15 220 3.3E-37 T 23-04-2016 IPR007346 Endonuclease I GO:0004518 LT40_RS10030 d8fa3e76b48f5967552267accd85e532 229 PANTHER PTHR33607 11 225 5.3E-39 T 23-04-2016 LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 PANTHER PTHR22942:SF38 7 303 5.0E-58 T 23-04-2016 LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 PRINTS PR01874 DNA repair protein radA signature 398 426 8.2E-6 T 23-04-2016 LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 PRINTS PR01874 DNA repair protein radA signature 257 285 8.2E-6 T 23-04-2016 LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 Pfam PF06745 KaiC 7 233 7.9E-40 T 23-04-2016 IPR014774 KaiC-like domain LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 Pfam PF06745 KaiC 249 464 2.6E-28 T 23-04-2016 IPR014774 KaiC-like domain LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 PIRSF PIRSF039117 1 488 1.8E-130 T 23-04-2016 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 SMART SM00382 23 215 0.0075 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 SMART SM00382 265 429 0.39 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 PANTHER PTHR22942 7 303 5.0E-58 T 23-04-2016 LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 SUPERFAMILY SSF52540 246 479 4.75E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 SUPERFAMILY SSF52540 7 238 8.3E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 Gene3D G3DSA:3.40.50.300 239 481 9.1E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10155 78a452383192d817d3a02641c0e01fb1 494 Gene3D G3DSA:3.40.50.300 4 238 7.1E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09340 1bf086731beb85ad51d7d3bc5dc445ea 1093 Pfam PF13855 Leucine rich repeat 558 616 1.5E-7 T 23-04-2016 IPR001611 Leucine-rich repeat GO:0005515 LT40_RS09340 1bf086731beb85ad51d7d3bc5dc445ea 1093 Gene3D G3DSA:3.80.10.10 539 800 2.5E-29 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LT40_RS09340 1bf086731beb85ad51d7d3bc5dc445ea 1093 PANTHER PTHR24365 1086 1093 1.6E-18 T 23-04-2016 LT40_RS09340 1bf086731beb85ad51d7d3bc5dc445ea 1093 PANTHER PTHR24365 539 782 1.6E-18 T 23-04-2016 LT40_RS09340 1bf086731beb85ad51d7d3bc5dc445ea 1093 Gene3D G3DSA:1.20.58.360 892 1036 3.5E-34 T 23-04-2016 LT40_RS09340 1bf086731beb85ad51d7d3bc5dc445ea 1093 SUPERFAMILY SSF52058 532 799 5.17E-28 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LT40_RS09340 1bf086731beb85ad51d7d3bc5dc445ea 1093 Gene3D G3DSA:1.20.1270.130 822 890 1.1E-8 T 23-04-2016 LT40_RS09340 1bf086731beb85ad51d7d3bc5dc445ea 1093 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 821 1040 2.0E-53 T 23-04-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- LT40_RS05750 47223a3178c28b4bd807759cded3460b 145 SUPERFAMILY SSF46785 10 142 1.32E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05750 47223a3178c28b4bd807759cded3460b 145 Gene3D G3DSA:1.10.10.10 2 143 1.7E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05750 47223a3178c28b4bd807759cded3460b 145 Pfam PF12802 MarR family 31 91 2.6E-13 T 23-04-2016 LT40_RS05750 47223a3178c28b4bd807759cded3460b 145 PANTHER PTHR33164 4 142 1.3E-27 T 23-04-2016 LT40_RS05750 47223a3178c28b4bd807759cded3460b 145 PANTHER PTHR33164:SF16 4 142 1.3E-27 T 23-04-2016 LT40_RS05750 47223a3178c28b4bd807759cded3460b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 2.5E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS05750 47223a3178c28b4bd807759cded3460b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 2.5E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS05750 47223a3178c28b4bd807759cded3460b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 2.5E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS05750 47223a3178c28b4bd807759cded3460b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 2.5E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS05750 47223a3178c28b4bd807759cded3460b 145 SMART SM00347 26 127 2.5E-22 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS04570 be0c52810cf9329004fa10910fee6553 223 SMART SM00448 1 112 3.1E-35 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS04570 be0c52810cf9329004fa10910fee6553 223 Gene3D G3DSA:1.10.10.10 125 220 9.5E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04570 be0c52810cf9329004fa10910fee6553 223 Gene3D G3DSA:3.40.50.2300 1 119 3.5E-36 T 23-04-2016 LT40_RS04570 be0c52810cf9329004fa10910fee6553 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 218 1.8E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS04570 be0c52810cf9329004fa10910fee6553 223 SMART SM00862 144 218 1.9E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS04570 be0c52810cf9329004fa10910fee6553 223 PANTHER PTHR26402 1 219 8.8E-82 T 23-04-2016 LT40_RS04570 be0c52810cf9329004fa10910fee6553 223 SUPERFAMILY SSF52172 1 173 4.27E-37 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS04570 be0c52810cf9329004fa10910fee6553 223 PANTHER PTHR26402:SF316 1 219 8.8E-82 T 23-04-2016 LT40_RS04570 be0c52810cf9329004fa10910fee6553 223 Pfam PF00072 Response regulator receiver domain 3 112 2.9E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS19475 78f8245d0324d7fdb239e9519ba6371c 157 Pfam PF12019 Type II transport protein GspH 44 147 3.3E-8 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 LT40_RS19475 78f8245d0324d7fdb239e9519ba6371c 157 Pfam PF13633 Prokaryotic N-terminal methylation site 6 30 2.7E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site LT40_RS19475 78f8245d0324d7fdb239e9519ba6371c 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 2.9E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site LT40_RS19475 78f8245d0324d7fdb239e9519ba6371c 157 Gene3D G3DSA:3.30.700.10 8 100 1.0E-5 T 23-04-2016 LT40_RS19475 78f8245d0324d7fdb239e9519ba6371c 157 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site LT40_RS19475 78f8245d0324d7fdb239e9519ba6371c 157 SUPERFAMILY SSF54523 8 96 4.0E-15 T 23-04-2016 LT40_RS11560 5585757b73529df40dfb782466f3e441 447 Gene3D G3DSA:1.20.1250.20 15 207 3.6E-44 T 23-04-2016 LT40_RS11560 5585757b73529df40dfb782466f3e441 447 SUPERFAMILY SSF103473 12 435 1.31E-88 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS11560 5585757b73529df40dfb782466f3e441 447 Gene3D G3DSA:1.20.1250.20 250 438 1.5E-36 T 23-04-2016 LT40_RS11560 5585757b73529df40dfb782466f3e441 447 PANTHER PTHR11662 12 444 4.6E-87 T 23-04-2016 LT40_RS11560 5585757b73529df40dfb782466f3e441 447 Pfam PF07690 Major Facilitator Superfamily 27 361 4.4E-54 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS11560 5585757b73529df40dfb782466f3e441 447 PIRSF PIRSF002808 3 445 1.7E-52 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LT40_RS19435 bf704b28e9cbb879ba43b6826e128fee 92 SUPERFAMILY SSF46992 3 86 1.7E-31 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19435 bf704b28e9cbb879ba43b6826e128fee 92 Pfam PF01649 Ribosomal protein S20 2 84 2.0E-28 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19435 bf704b28e9cbb879ba43b6826e128fee 92 Gene3D G3DSA:1.20.58.110 3 86 1.4E-30 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19435 bf704b28e9cbb879ba43b6826e128fee 92 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.199 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19435 bf704b28e9cbb879ba43b6826e128fee 92 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 8.4E-28 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19435 bf704b28e9cbb879ba43b6826e128fee 92 PANTHER PTHR33398 2 92 1.0E-35 T 23-04-2016 LT40_RS19435 bf704b28e9cbb879ba43b6826e128fee 92 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 19 92 2.0E-34 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS10320 a8d6f9c5f7c4876f189225bbaacc7526 180 Pfam PF16304 Domain of unknown function (DUF4946) 26 176 2.2E-49 T 23-04-2016 IPR032543 Protein of unknown function DUF4946 LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 284 391 2.0E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 SUPERFAMILY SSF55874 249 392 4.45E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 Gene3D G3DSA:3.30.450.40 19 162 3.9E-12 T 23-04-2016 IPR029016 GAF domain-like LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 SMART SM00388 173 238 1.8E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 SUPERFAMILY SSF47384 162 235 4.9E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 Pfam PF00512 His Kinase A (phospho-acceptor) domain 174 235 2.6E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 Gene3D G3DSA:3.30.565.10 250 393 6.2E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 SUPERFAMILY SSF55781 18 160 2.32E-16 T 23-04-2016 IPR029016 GAF domain-like LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 Gene3D G3DSA:1.10.287.130 167 234 1.6E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 334 4.5E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 390 4.5E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 371 4.5E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 348 4.5E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 SMART SM00387 283 393 1.8E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 PANTHER PTHR24423 135 394 3.8E-46 T 23-04-2016 LT40_RS20775 ae82053994b4b9d49ba374e3aa438d16 396 SMART SM00065 13 165 8.8E-4 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS07345 a1ede6a5b41e5e8c3e33a7b593ffeb58 363 SUPERFAMILY SSF52096 270 346 5.15E-69 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS07345 a1ede6a5b41e5e8c3e33a7b593ffeb58 363 SUPERFAMILY SSF52096 18 201 5.15E-69 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS07345 a1ede6a5b41e5e8c3e33a7b593ffeb58 363 PANTHER PTHR11941 5 201 5.2E-107 T 23-04-2016 LT40_RS07345 a1ede6a5b41e5e8c3e33a7b593ffeb58 363 PANTHER PTHR11941 262 343 5.2E-107 T 23-04-2016 LT40_RS07345 a1ede6a5b41e5e8c3e33a7b593ffeb58 363 Pfam PF16113 Enoyl-CoA hydratase/isomerase 28 360 5.3E-120 T 23-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 LT40_RS07345 a1ede6a5b41e5e8c3e33a7b593ffeb58 363 Gene3D G3DSA:1.10.12.10 287 334 1.4E-6 T 23-04-2016 IPR014748 Crontonase, C-terminal LT40_RS07345 a1ede6a5b41e5e8c3e33a7b593ffeb58 363 Gene3D G3DSA:3.90.226.10 18 206 1.2E-55 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS07345 a1ede6a5b41e5e8c3e33a7b593ffeb58 363 PANTHER PTHR11941:SF53 5 201 5.2E-107 T 23-04-2016 LT40_RS07345 a1ede6a5b41e5e8c3e33a7b593ffeb58 363 PANTHER PTHR11941:SF53 262 343 5.2E-107 T 23-04-2016 LT40_RS10355 19f4c64f7a6e12368076fcd19c39dff7 380 Gene3D G3DSA:3.40.640.10 18 249 2.8E-84 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS10355 19f4c64f7a6e12368076fcd19c39dff7 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 194 213 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LT40_RS10355 19f4c64f7a6e12368076fcd19c39dff7 380 Pfam PF00266 Aminotransferase class-V 7 363 7.3E-76 T 23-04-2016 IPR000192 Aminotransferase class V domain LT40_RS10355 19f4c64f7a6e12368076fcd19c39dff7 380 Gene3D G3DSA:3.90.1150.10 250 371 2.8E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS10355 19f4c64f7a6e12368076fcd19c39dff7 380 PIRSF PIRSF005572 4 378 3.3E-108 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LT40_RS10355 19f4c64f7a6e12368076fcd19c39dff7 380 PANTHER PTHR11601:SF45 5 374 3.8E-156 T 23-04-2016 LT40_RS10355 19f4c64f7a6e12368076fcd19c39dff7 380 PANTHER PTHR11601 5 374 3.8E-156 T 23-04-2016 LT40_RS10355 19f4c64f7a6e12368076fcd19c39dff7 380 SUPERFAMILY SSF53383 6 374 9.58E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS01410 b63552392f7fbabd8e1a92f55e684cb5 521 SUPERFAMILY SSF55073 345 502 6.12E-42 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS01410 b63552392f7fbabd8e1a92f55e684cb5 521 Gene3D G3DSA:3.30.70.270 342 503 6.1E-49 T 23-04-2016 LT40_RS01410 b63552392f7fbabd8e1a92f55e684cb5 521 SUPERFAMILY SSF103190 71 199 1.49E-5 T 23-04-2016 IPR029151 Periplasmic sensor domain-like LT40_RS01410 b63552392f7fbabd8e1a92f55e684cb5 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 336 504 1.8E-52 T 23-04-2016 IPR000160 GGDEF domain LT40_RS01410 b63552392f7fbabd8e1a92f55e684cb5 521 Pfam PF02743 Cache domain 56 275 2.0E-15 T 23-04-2016 IPR033479 Double Cache domain 1 LT40_RS01410 b63552392f7fbabd8e1a92f55e684cb5 521 Gene3D G3DSA:3.30.450.20 178 289 7.7E-9 T 23-04-2016 LT40_RS01410 b63552392f7fbabd8e1a92f55e684cb5 521 PANTHER PTHR10799 23 501 1.2E-22 T 23-04-2016 LT40_RS01410 b63552392f7fbabd8e1a92f55e684cb5 521 SMART SM00267 329 504 2.8E-53 T 23-04-2016 IPR000160 GGDEF domain LT40_RS01410 b63552392f7fbabd8e1a92f55e684cb5 521 Gene3D G3DSA:3.30.450.20 97 177 3.7E-14 T 23-04-2016 LT40_RS01410 b63552392f7fbabd8e1a92f55e684cb5 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 500 1.1E-45 T 23-04-2016 IPR000160 GGDEF domain LT40_RS01410 b63552392f7fbabd8e1a92f55e684cb5 521 PANTHER PTHR10799:SF750 23 501 1.2E-22 T 23-04-2016 LT40_RS06470 3ae7445d5a3f599913ef880e8531123f 131 PANTHER PTHR22769:SF5 5 125 4.9E-35 T 23-04-2016 LT40_RS06470 3ae7445d5a3f599913ef880e8531123f 131 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LT40_RS06470 3ae7445d5a3f599913ef880e8531123f 131 PANTHER PTHR22769 5 125 4.9E-35 T 23-04-2016 LT40_RS06470 3ae7445d5a3f599913ef880e8531123f 131 Gene3D G3DSA:3.90.79.10 5 124 6.4E-23 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS06470 3ae7445d5a3f599913ef880e8531123f 131 SUPERFAMILY SSF55811 5 125 4.2E-24 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS06470 3ae7445d5a3f599913ef880e8531123f 131 PRINTS PR00502 NUDIX hydrolase family signature 44 59 1.1E-5 T 23-04-2016 IPR020476 NUDIX hydrolase LT40_RS06470 3ae7445d5a3f599913ef880e8531123f 131 PRINTS PR00502 NUDIX hydrolase family signature 30 44 1.1E-5 T 23-04-2016 IPR020476 NUDIX hydrolase LT40_RS06470 3ae7445d5a3f599913ef880e8531123f 131 Pfam PF00293 NUDIX domain 8 118 2.6E-16 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 SUPERFAMILY SSF51306 79 201 1.41E-37 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 SUPERFAMILY SSF46785 3 69 1.67E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 Gene3D G3DSA:1.10.10.10 1 69 1.3E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 PANTHER PTHR33516:SF2 1 202 2.2E-96 T 23-04-2016 LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 PANTHER PTHR33516 1 202 2.2E-96 T 23-04-2016 LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 Pfam PF00717 Peptidase S24-like 118 184 4.9E-15 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 202 1.1E-74 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 Gene3D G3DSA:2.10.109.10 80 202 6.4E-45 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 Hamap MF_00015 LexA repressor [lexA]. 3 202 31.252 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.2E-12 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.2E-12 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.2E-12 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LT40_RS07310 b0f75b9a6e9e4ed123e3657094356a2d 202 Pfam PF01726 LexA DNA binding domain 1 65 2.2E-30 T 23-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 LT40_RS20540 7011d34fe87d50bfd0d68704f43198c2 226 Gene3D G3DSA:3.30.420.40 4 131 8.9E-42 T 23-04-2016 LT40_RS20540 7011d34fe87d50bfd0d68704f43198c2 226 Pfam PF00814 Glycoprotease family 31 149 8.2E-27 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LT40_RS20540 7011d34fe87d50bfd0d68704f43198c2 226 PANTHER PTHR11735 1 138 4.2E-55 T 23-04-2016 LT40_RS20540 7011d34fe87d50bfd0d68704f43198c2 226 SUPERFAMILY SSF53067 4 107 1.34E-28 T 23-04-2016 LT40_RS20540 7011d34fe87d50bfd0d68704f43198c2 226 PANTHER PTHR11735:SF11 1 138 4.2E-55 T 23-04-2016 LT40_RS20540 7011d34fe87d50bfd0d68704f43198c2 226 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 215 6.9E-64 T 23-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 LT40_RS20540 7011d34fe87d50bfd0d68704f43198c2 226 SUPERFAMILY SSF53067 110 213 1.42E-23 T 23-04-2016 LT40_RS16905 5c680ccfd7752454b0bddfe8657782cd 149 PANTHER PTHR14087 1 148 1.5E-70 T 23-04-2016 LT40_RS16905 5c680ccfd7752454b0bddfe8657782cd 149 Pfam PF01878 EVE domain 2 148 2.1E-50 T 23-04-2016 IPR002740 EVE domain LT40_RS16905 5c680ccfd7752454b0bddfe8657782cd 149 Gene3D G3DSA:3.10.590.10 1 147 7.2E-26 T 23-04-2016 IPR002740 EVE domain LT40_RS16905 5c680ccfd7752454b0bddfe8657782cd 149 SUPERFAMILY SSF88697 1 148 5.88E-57 T 23-04-2016 IPR015947 PUA-like domain LT40_RS13830 eadf3bdfc20ba03aee8c3d9e909fcf08 156 SUPERFAMILY SSF52540 26 127 1.65E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13830 eadf3bdfc20ba03aee8c3d9e909fcf08 156 Gene3D G3DSA:3.40.50.300 4 151 2.7E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13830 eadf3bdfc20ba03aee8c3d9e909fcf08 156 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 138 1.6E-46 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 LT40_RS13830 eadf3bdfc20ba03aee8c3d9e909fcf08 156 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 11 130 5.6E-39 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 LT40_RS13830 eadf3bdfc20ba03aee8c3d9e909fcf08 156 PANTHER PTHR33540 3 153 8.0E-46 T 23-04-2016 LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 SUPERFAMILY SSF51735 2 173 7.92E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 161 315 2.6E-16 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 PANTHER PTHR32338:SF8 1 344 2.5E-180 T 23-04-2016 LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 SUPERFAMILY SSF55347 150 312 1.57E-50 T 23-04-2016 LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 Gene3D G3DSA:3.40.50.720 1 158 4.1E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 PANTHER PTHR32338 1 344 2.5E-180 T 23-04-2016 LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 SMART SM00859 3 142 2.9E-65 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 Gene3D G3DSA:3.30.360.10 159 312 2.5E-60 T 23-04-2016 LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 145 161 - T 23-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 344 4.6E-132 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 338 42.967 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 LT40_RS18215 1962459870c24351739e3cfa28ccd39f 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 142 2.9E-38 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LT40_RS19890 0c76708e7f4fefb4238ae61927f8756e 341 Gene3D G3DSA:3.40.50.1400 199 336 5.3E-31 T 23-04-2016 LT40_RS19890 0c76708e7f4fefb4238ae61927f8756e 341 TIGRFAM TIGR00109 hemH: ferrochelatase 3 210 4.5E-39 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LT40_RS19890 0c76708e7f4fefb4238ae61927f8756e 341 PANTHER PTHR11108 5 201 5.2E-88 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LT40_RS19890 0c76708e7f4fefb4238ae61927f8756e 341 PANTHER PTHR11108 225 330 5.2E-88 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LT40_RS19890 0c76708e7f4fefb4238ae61927f8756e 341 SUPERFAMILY SSF53800 2 336 7.85E-86 T 23-04-2016 LT40_RS19890 0c76708e7f4fefb4238ae61927f8756e 341 Gene3D G3DSA:3.40.50.1400 4 198 5.0E-52 T 23-04-2016 LT40_RS19890 0c76708e7f4fefb4238ae61927f8756e 341 Hamap MF_00323 Ferrochelatase [hemH]. 2 338 33.622 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LT40_RS19890 0c76708e7f4fefb4238ae61927f8756e 341 Pfam PF00762 Ferrochelatase 4 335 2.4E-96 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 LT40_RS10100 b2e0e5410f889402aecafc82191c3ee6 338 PANTHER PTHR35801 1 338 3.3E-64 T 23-04-2016 LT40_RS10100 b2e0e5410f889402aecafc82191c3ee6 338 Gene3D G3DSA:3.30.565.10 21 110 9.3E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10100 b2e0e5410f889402aecafc82191c3ee6 338 SUPERFAMILY SSF81606 157 334 6.41E-14 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LT40_RS10100 b2e0e5410f889402aecafc82191c3ee6 338 PANTHER PTHR35801:SF1 1 338 3.3E-64 T 23-04-2016 LT40_RS10100 b2e0e5410f889402aecafc82191c3ee6 338 Pfam PF13581 Histidine kinase-like ATPase domain 17 131 1.1E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10100 b2e0e5410f889402aecafc82191c3ee6 338 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 171 332 3.6E-9 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LT40_RS10100 b2e0e5410f889402aecafc82191c3ee6 338 SUPERFAMILY SSF55874 31 111 2.26E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10100 b2e0e5410f889402aecafc82191c3ee6 338 SMART SM00331 143 333 9.9E-4 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 SUPERFAMILY SSF46785 1 106 3.96E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 Pfam PF03466 LysR substrate binding domain 91 291 4.0E-55 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 PANTHER PTHR30126 3 306 8.8E-104 T 23-04-2016 LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 Gene3D G3DSA:3.40.190.10 91 174 4.5E-16 T 23-04-2016 LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 SUPERFAMILY SSF53850 91 296 3.26E-50 T 23-04-2016 LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 Gene3D G3DSA:1.10.10.10 3 85 5.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.4E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 Gene3D G3DSA:3.40.190.10 175 258 9.8E-24 T 23-04-2016 LT40_RS00615 a0e75791e45b9b7cc3a3394221538775 308 PANTHER PTHR30126:SF11 3 306 8.8E-104 T 23-04-2016 LT40_RS03335 1db787dcff293294ed31396847867552 295 PANTHER PTHR11048:SF20 1 286 1.2E-131 T 23-04-2016 LT40_RS03335 1db787dcff293294ed31396847867552 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 23-04-2016 IPR030470 UbiA prenyltransferase conserved site LT40_RS03335 1db787dcff293294ed31396847867552 295 Pfam PF01040 UbiA prenyltransferase family 20 267 6.7E-58 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 LT40_RS03335 1db787dcff293294ed31396847867552 295 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 5.1E-92 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 LT40_RS03335 1db787dcff293294ed31396847867552 295 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 17.697 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 LT40_RS03335 1db787dcff293294ed31396847867552 295 PANTHER PTHR11048 1 286 1.2E-131 T 23-04-2016 LT40_RS09985 32f4f08e389f499a8d7d6028640e832e 251 PANTHER PTHR30060:SF1 4 250 2.2E-93 T 23-04-2016 LT40_RS09985 32f4f08e389f499a8d7d6028640e832e 251 PANTHER PTHR30060 4 250 2.2E-93 T 23-04-2016 LT40_RS09985 32f4f08e389f499a8d7d6028640e832e 251 Pfam PF03741 Integral membrane protein TerC family 18 209 1.5E-51 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 LT40_RS20700 95916f4c0f4f6a97d76c9ae631f23720 406 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS20700 95916f4c0f4f6a97d76c9ae631f23720 406 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS20700 95916f4c0f4f6a97d76c9ae631f23720 406 PANTHER PTHR32479:SF2 14 404 4.0E-130 T 23-04-2016 LT40_RS20700 95916f4c0f4f6a97d76c9ae631f23720 406 SUPERFAMILY SSF54862 14 118 4.6E-20 T 23-04-2016 LT40_RS20700 95916f4c0f4f6a97d76c9ae631f23720 406 Gene3D G3DSA:1.10.1060.10 15 101 5.6E-21 T 23-04-2016 LT40_RS20700 95916f4c0f4f6a97d76c9ae631f23720 406 Pfam PF02754 Cysteine-rich domain 303 386 7.2E-13 T 23-04-2016 IPR004017 Cysteine-rich domain LT40_RS20700 95916f4c0f4f6a97d76c9ae631f23720 406 Pfam PF02754 Cysteine-rich domain 170 255 4.8E-12 T 23-04-2016 IPR004017 Cysteine-rich domain LT40_RS20700 95916f4c0f4f6a97d76c9ae631f23720 406 PIRSF PIRSF000139 6 406 7.8E-122 T 23-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit LT40_RS20700 95916f4c0f4f6a97d76c9ae631f23720 406 PANTHER PTHR32479 14 404 4.0E-130 T 23-04-2016 LT40_RS20700 95916f4c0f4f6a97d76c9ae631f23720 406 Pfam PF12838 4Fe-4S dicluster domain 24 89 7.2E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain LT40_RS02375 59bc77183ee99b4c2c6b69f35cc0a7bc 135 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 126 8.3E-21 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 LT40_RS02375 59bc77183ee99b4c2c6b69f35cc0a7bc 135 SUPERFAMILY SSF101116 9 129 1.12E-30 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 LT40_RS02375 59bc77183ee99b4c2c6b69f35cc0a7bc 135 PANTHER PTHR34773 1 128 1.1E-28 T 23-04-2016 LT40_RS02375 59bc77183ee99b4c2c6b69f35cc0a7bc 135 PIRSF PIRSF039090 1 134 1.5E-40 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 LT40_RS02375 59bc77183ee99b4c2c6b69f35cc0a7bc 135 Gene3D G3DSA:1.20.120.340 8 129 7.4E-32 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 LT40_RS02375 59bc77183ee99b4c2c6b69f35cc0a7bc 135 Pfam PF02561 Flagellar protein FliS 8 126 3.7E-32 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 2.3E-131 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 Gene3D G3DSA:1.10.275.10 1 119 3.2E-46 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 PANTHER PTHR11444:SF17 4 452 0.0 T 23-04-2016 LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 Pfam PF00206 Lyase 14 313 1.4E-64 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 Gene3D G3DSA:1.10.40.30 391 446 9.8E-33 T 23-04-2016 LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 7.0E-19 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 7.0E-19 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 7.0E-19 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 7.0E-19 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 Gene3D G3DSA:1.20.200.10 120 390 3.2E-89 T 23-04-2016 LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 PANTHER PTHR11444 4 452 0.0 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 SUPERFAMILY SSF48557 10 456 6.28E-106 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 LT40_RS11330 f52817889ae698ae5b41872ed3f1e1bf 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 5.9E-52 T 23-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 LT40_RS04770 508a999cc0f6f90482349ddc0fe6b4ff 235 PANTHER PTHR38096 1 234 8.2E-56 T 23-04-2016 LT40_RS04770 508a999cc0f6f90482349ddc0fe6b4ff 235 PRINTS PR01399 Enterobactin synthetase component D signature 163 179 1.4E-17 T 23-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 LT40_RS04770 508a999cc0f6f90482349ddc0fe6b4ff 235 PRINTS PR01399 Enterobactin synthetase component D signature 58 78 1.4E-17 T 23-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 LT40_RS04770 508a999cc0f6f90482349ddc0fe6b4ff 235 PRINTS PR01399 Enterobactin synthetase component D signature 88 106 1.4E-17 T 23-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 LT40_RS04770 508a999cc0f6f90482349ddc0fe6b4ff 235 Gene3D G3DSA:3.90.470.20 122 205 4.8E-10 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LT40_RS04770 508a999cc0f6f90482349ddc0fe6b4ff 235 SUPERFAMILY SSF56214 121 232 4.88E-15 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LT40_RS04770 508a999cc0f6f90482349ddc0fe6b4ff 235 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 122 196 1.3E-10 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 Pfam PF00682 HMGL-like 33 313 2.0E-76 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 40 56 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 8 549 54.866 T 23-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 SUPERFAMILY SSF110921 444 546 1.96E-31 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 PANTHER PTHR10277 1 556 6.6E-288 T 23-04-2016 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 Gene3D G3DSA:3.20.20.70 11 394 5.2E-148 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 243 256 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 SMART SM00917 422 548 9.7E-31 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 Pfam PF08502 LeuA allosteric (dimerisation) domain 422 547 1.3E-29 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 7 547 4.2E-241 T 23-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 SUPERFAMILY SSF51569 22 330 2.75E-99 T 23-04-2016 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 SUPERFAMILY SSF89000 388 438 6.28E-14 T 23-04-2016 LT40_RS03580 f65b62a5afae11ffee4cf40ad91bcb27 556 PANTHER PTHR10277:SF28 1 556 6.6E-288 T 23-04-2016 LT40_RS10720 487a8ad775ac9bc9dd795e4b7bcce37b 397 PANTHER PTHR37850 48 379 1.5E-95 T 23-04-2016 LT40_RS10720 487a8ad775ac9bc9dd795e4b7bcce37b 397 SUPERFAMILY SSF51735 2 93 6.13E-5 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10720 487a8ad775ac9bc9dd795e4b7bcce37b 397 PANTHER PTHR37850:SF2 48 379 1.5E-95 T 23-04-2016 LT40_RS13500 527f02302f3c2fec1a9b8ac95306601b 208 SUPERFAMILY SSF63965 1 205 9.16E-76 T 23-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 LT40_RS13500 527f02302f3c2fec1a9b8ac95306601b 208 Gene3D G3DSA:3.40.50.10230 1 204 3.4E-83 T 23-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 LT40_RS13500 527f02302f3c2fec1a9b8ac95306601b 208 PANTHER PTHR32439 2 203 1.1E-73 T 23-04-2016 LT40_RS13500 527f02302f3c2fec1a9b8ac95306601b 208 Pfam PF02570 Precorrin-8X methylmutase 10 205 1.5E-74 T 23-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 PRINTS PR00094 Adenylate kinase signature 81 97 3.9E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 PRINTS PR00094 Adenylate kinase signature 4 17 3.9E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 PRINTS PR00094 Adenylate kinase signature 156 171 3.9E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 PRINTS PR00094 Adenylate kinase signature 173 187 3.9E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 PRINTS PR00094 Adenylate kinase signature 32 46 3.9E-34 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 PANTHER PTHR23359 1 215 6.0E-108 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.3E-14 T 23-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 Pfam PF00406 Adenylate kinase 5 184 4.0E-55 T 23-04-2016 LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 214 2.2E-73 T 23-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 Gene3D G3DSA:3.40.50.300 1 213 7.6E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 SUPERFAMILY SSF52540 1 188 5.11E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20535 960c46962b3a9afa40f55673c3a8eccb 215 Hamap MF_00235 Adenylate kinase [adk]. 1 215 51.593 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 LT40_RS07135 d7f8855ce0dedfcf99c7cc0c3ddef1a8 300 SMART SM01130 2 290 2.7E-86 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS07135 d7f8855ce0dedfcf99c7cc0c3ddef1a8 300 SUPERFAMILY SSF51569 1 289 2.3E-81 T 23-04-2016 LT40_RS07135 d7f8855ce0dedfcf99c7cc0c3ddef1a8 300 Pfam PF00701 Dihydrodipicolinate synthetase family 3 287 6.9E-56 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS07135 d7f8855ce0dedfcf99c7cc0c3ddef1a8 300 PANTHER PTHR12128:SF34 1 300 3.2E-87 T 23-04-2016 LT40_RS07135 d7f8855ce0dedfcf99c7cc0c3ddef1a8 300 Gene3D G3DSA:3.20.20.70 1 289 7.0E-86 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS07135 d7f8855ce0dedfcf99c7cc0c3ddef1a8 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 1.0E-15 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS07135 d7f8855ce0dedfcf99c7cc0c3ddef1a8 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.0E-15 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS07135 d7f8855ce0dedfcf99c7cc0c3ddef1a8 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.0E-15 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS07135 d7f8855ce0dedfcf99c7cc0c3ddef1a8 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.0E-15 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS07135 d7f8855ce0dedfcf99c7cc0c3ddef1a8 300 PANTHER PTHR12128 1 300 3.2E-87 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS07135 d7f8855ce0dedfcf99c7cc0c3ddef1a8 300 PIRSF PIRSF001365 1 299 1.4E-78 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS12025 3b988db83949422e2f61d00c5dd66f31 477 PANTHER PTHR11699 1 477 5.2E-195 T 23-04-2016 LT40_RS12025 3b988db83949422e2f61d00c5dd66f31 477 Pfam PF00171 Aldehyde dehydrogenase family 11 472 2.3E-157 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS12025 3b988db83949422e2f61d00c5dd66f31 477 SUPERFAMILY SSF53720 2 475 1.44E-153 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS12025 3b988db83949422e2f61d00c5dd66f31 477 Gene3D G3DSA:3.40.605.10 2 262 4.4E-88 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS12025 3b988db83949422e2f61d00c5dd66f31 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS12025 3b988db83949422e2f61d00c5dd66f31 477 Gene3D G3DSA:3.40.309.10 263 442 2.7E-60 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS02770 367a2c7760cf0157e10bfc1148cf8791 367 Pfam PF07759 Protein of unknown function (DUF1615) 51 365 1.9E-145 T 23-04-2016 IPR011673 Protein of unknown function DUF1615 LT40_RS02770 367a2c7760cf0157e10bfc1148cf8791 367 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 17 365 1.0E-141 T 23-04-2016 IPR011673 Protein of unknown function DUF1615 LT40_RS12250 f429a78f7b9f82ab23a99fe464a39f13 511 SUPERFAMILY SSF141868 263 509 1.29E-76 T 23-04-2016 IPR001633 EAL domain LT40_RS12250 f429a78f7b9f82ab23a99fe464a39f13 511 SMART SM00052 257 503 2.4E-100 T 23-04-2016 IPR001633 EAL domain LT40_RS12250 f429a78f7b9f82ab23a99fe464a39f13 511 Pfam PF12792 CSS motif domain associated with EAL 46 227 8.9E-43 T 23-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain LT40_RS12250 f429a78f7b9f82ab23a99fe464a39f13 511 PANTHER PTHR33121 226 504 2.0E-102 T 23-04-2016 LT40_RS12250 f429a78f7b9f82ab23a99fe464a39f13 511 Gene3D G3DSA:3.20.20.450 263 508 6.0E-79 T 23-04-2016 IPR001633 EAL domain LT40_RS12250 f429a78f7b9f82ab23a99fe464a39f13 511 Pfam PF00563 EAL domain 263 498 1.9E-64 T 23-04-2016 IPR001633 EAL domain LT40_RS12250 f429a78f7b9f82ab23a99fe464a39f13 511 PANTHER PTHR33121:SF1 226 504 2.0E-102 T 23-04-2016 LT40_RS00025 569882d48fead00b9f6c8f84052eb470 258 Pfam PF14518 Iron-containing redox enzyme 42 225 1.8E-9 T 23-04-2016 IPR028201 PqqC-like protein LT40_RS00025 569882d48fead00b9f6c8f84052eb470 258 SUPERFAMILY SSF48613 11 239 1.53E-12 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LT40_RS00025 569882d48fead00b9f6c8f84052eb470 258 Gene3D G3DSA:1.20.910.10 10 245 6.9E-19 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LT40_RS04270 83261d48e983907756f64c2f1281eb1b 359 Pfam PF00144 Beta-lactamase 49 345 4.4E-32 T 23-04-2016 IPR001466 Beta-lactamase-related LT40_RS04270 83261d48e983907756f64c2f1281eb1b 359 PANTHER PTHR22935:SF10 1 355 2.7E-57 T 23-04-2016 LT40_RS04270 83261d48e983907756f64c2f1281eb1b 359 SUPERFAMILY SSF56601 3 353 9.47E-72 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS04270 83261d48e983907756f64c2f1281eb1b 359 PANTHER PTHR22935 1 355 2.7E-57 T 23-04-2016 LT40_RS04270 83261d48e983907756f64c2f1281eb1b 359 Gene3D G3DSA:3.40.710.10 32 354 2.1E-40 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS03655 e956ca078d474aef9cdcc7c7be4df0f3 249 Gene3D G3DSA:1.20.120.530 98 243 7.2E-35 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS03655 e956ca078d474aef9cdcc7c7be4df0f3 249 PANTHER PTHR11751 19 120 3.2E-24 T 23-04-2016 LT40_RS03655 e956ca078d474aef9cdcc7c7be4df0f3 249 SUPERFAMILY SSF46785 12 84 1.75E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03655 e956ca078d474aef9cdcc7c7be4df0f3 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 4.4E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS03655 e956ca078d474aef9cdcc7c7be4df0f3 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 4.4E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS03655 e956ca078d474aef9cdcc7c7be4df0f3 249 SMART SM00345 21 80 2.3E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS03655 e956ca078d474aef9cdcc7c7be4df0f3 249 Pfam PF07729 FCD domain 105 231 5.7E-23 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS03655 e956ca078d474aef9cdcc7c7be4df0f3 249 SUPERFAMILY SSF48008 100 240 7.59E-28 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS03655 e956ca078d474aef9cdcc7c7be4df0f3 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 1.6E-20 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS03655 e956ca078d474aef9cdcc7c7be4df0f3 249 SMART SM00895 104 232 2.3E-23 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS03655 e956ca078d474aef9cdcc7c7be4df0f3 249 Gene3D G3DSA:1.10.10.10 12 84 4.7E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03590 cbb37897d27c015af2e67d863d8ef0a5 459 Pfam PF13742 OB-fold nucleic acid binding domain 16 108 3.8E-28 T 23-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 LT40_RS03590 cbb37897d27c015af2e67d863d8ef0a5 459 PANTHER PTHR30008:SF0 8 458 6.3E-173 T 23-04-2016 LT40_RS03590 cbb37897d27c015af2e67d863d8ef0a5 459 Pfam PF02601 Exonuclease VII, large subunit 132 443 9.3E-98 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 LT40_RS03590 cbb37897d27c015af2e67d863d8ef0a5 459 Gene3D G3DSA:2.40.50.140 38 113 4.1E-4 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS03590 cbb37897d27c015af2e67d863d8ef0a5 459 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 13 446 30.89 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 LT40_RS03590 cbb37897d27c015af2e67d863d8ef0a5 459 PANTHER PTHR30008 8 458 6.3E-173 T 23-04-2016 LT40_RS03590 cbb37897d27c015af2e67d863d8ef0a5 459 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 17 361 2.3E-130 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 LT40_RS12360 66d1ae6188eb9fd36e4e71a76ab4c0a7 431 PANTHER PTHR11662:SF283 10 424 8.9E-124 T 23-04-2016 LT40_RS12360 66d1ae6188eb9fd36e4e71a76ab4c0a7 431 PANTHER PTHR11662 10 424 8.9E-124 T 23-04-2016 LT40_RS12360 66d1ae6188eb9fd36e4e71a76ab4c0a7 431 Gene3D G3DSA:1.20.1250.20 17 219 3.6E-40 T 23-04-2016 LT40_RS12360 66d1ae6188eb9fd36e4e71a76ab4c0a7 431 SUPERFAMILY SSF103473 9 430 9.81E-77 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS12360 66d1ae6188eb9fd36e4e71a76ab4c0a7 431 Pfam PF07690 Major Facilitator Superfamily 27 376 1.0E-38 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS12360 66d1ae6188eb9fd36e4e71a76ab4c0a7 431 Gene3D G3DSA:1.20.1250.20 247 428 2.4E-16 T 23-04-2016 LT40_RS17285 7dbaa9c3f3bb790e2fec16c290e7baef 368 TIGRFAM TIGR03380 agmatine_aguA: agmatine deiminase 6 364 2.3E-173 T 23-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 LT40_RS17285 7dbaa9c3f3bb790e2fec16c290e7baef 368 PANTHER PTHR31377 1 368 9.8E-186 T 23-04-2016 LT40_RS17285 7dbaa9c3f3bb790e2fec16c290e7baef 368 Hamap MF_01841 Agmatine deiminase [aguA]. 6 364 61.45 T 23-04-2016 IPR017754 Agmatine deiminase GO:0009446|GO:0047632 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 LT40_RS17285 7dbaa9c3f3bb790e2fec16c290e7baef 368 Gene3D G3DSA:3.75.10.10 3 364 5.7E-150 T 23-04-2016 LT40_RS17285 7dbaa9c3f3bb790e2fec16c290e7baef 368 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 14 363 1.2E-123 T 23-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 LT40_RS17285 7dbaa9c3f3bb790e2fec16c290e7baef 368 SUPERFAMILY SSF55909 2 364 1.78E-142 T 23-04-2016 LT40_RS17285 7dbaa9c3f3bb790e2fec16c290e7baef 368 PANTHER PTHR31377:SF2 1 368 9.8E-186 T 23-04-2016 LT40_RS08855 4568c52d1c92b7fc36dc69282d588083 141 Pfam PF15970 HicB_like antitoxin of bacterial toxin-antitoxin system 18 81 2.3E-9 T 23-04-2016 IPR032753 HicB-like antitoxin LT40_RS08855 4568c52d1c92b7fc36dc69282d588083 141 SUPERFAMILY SSF143100 2 62 9.94E-8 T 23-04-2016 LT40_RS09585 882e3a46f100a5e1c588475853458e93 447 Gene3D G3DSA:3.20.20.450 186 430 6.9E-84 T 23-04-2016 IPR001633 EAL domain LT40_RS09585 882e3a46f100a5e1c588475853458e93 447 PANTHER PTHR33121 146 430 1.2E-88 T 23-04-2016 LT40_RS09585 882e3a46f100a5e1c588475853458e93 447 Pfam PF00563 EAL domain 189 421 6.0E-67 T 23-04-2016 IPR001633 EAL domain LT40_RS09585 882e3a46f100a5e1c588475853458e93 447 SUPERFAMILY SSF141868 188 430 6.41E-79 T 23-04-2016 IPR001633 EAL domain LT40_RS09585 882e3a46f100a5e1c588475853458e93 447 SUPERFAMILY SSF55073 18 160 2.59E-9 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS09585 882e3a46f100a5e1c588475853458e93 447 SMART SM00052 182 426 1.1E-88 T 23-04-2016 IPR001633 EAL domain LT40_RS09585 882e3a46f100a5e1c588475853458e93 447 Gene3D G3DSA:3.30.70.270 16 160 8.3E-10 T 23-04-2016 LT40_RS09585 882e3a46f100a5e1c588475853458e93 447 PANTHER PTHR33121:SF13 146 430 1.2E-88 T 23-04-2016 LT40_RS09585 882e3a46f100a5e1c588475853458e93 447 SMART SM00267 6 172 0.0045 T 23-04-2016 IPR000160 GGDEF domain LT40_RS09585 882e3a46f100a5e1c588475853458e93 447 Pfam PF00990 Diguanylate cyclase, GGDEF domain 15 158 5.1E-6 T 23-04-2016 IPR000160 GGDEF domain LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PANTHER PTHR30222:SF11 1 365 3.8E-198 T 23-04-2016 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PANTHER PTHR30222 1 365 3.8E-198 T 23-04-2016 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 6.5E-66 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 90 103 6.5E-66 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 74 88 6.5E-66 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 309 335 6.5E-66 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 264 283 6.5E-66 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 6.5E-66 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 177 196 6.5E-66 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 214 233 6.5E-66 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 6.5E-66 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 154 168 6.5E-66 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 Pfam PF13416 Bacterial extracellular solute-binding protein 41 329 1.4E-31 T 23-04-2016 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 Gene3D G3DSA:3.40.190.10 146 313 1.6E-64 T 23-04-2016 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 SUPERFAMILY SSF53850 25 364 2.61E-99 T 23-04-2016 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 Gene3D G3DSA:3.40.190.10 39 145 1.2E-11 T 23-04-2016 LT40_RS17035 6ce8b71f4da2eb3f97bf27d1209e3e6b 365 PIRSF PIRSF019574 1 365 6.7E-139 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS15250 1037d13ca069e6f1b54b8d9bac85b933 308 SUPERFAMILY SSF51735 95 274 1.61E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15250 1037d13ca069e6f1b54b8d9bac85b933 308 Gene3D G3DSA:3.40.50.720 109 274 4.2E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15250 1037d13ca069e6f1b54b8d9bac85b933 308 SUPERFAMILY SSF52283 30 122 2.04E-6 T 23-04-2016 LT40_RS15250 1037d13ca069e6f1b54b8d9bac85b933 308 PANTHER PTHR10996:SF114 24 303 1.2E-95 T 23-04-2016 LT40_RS15250 1037d13ca069e6f1b54b8d9bac85b933 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 273 2.1E-45 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LT40_RS15250 1037d13ca069e6f1b54b8d9bac85b933 308 Gene3D G3DSA:3.40.50.720 49 108 4.5E-5 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS15250 1037d13ca069e6f1b54b8d9bac85b933 308 PANTHER PTHR10996 24 303 1.2E-95 T 23-04-2016 LT40_RS02140 26f2385f9f70486c837f6a8d3aaf1057 357 SUPERFAMILY SSF161098 120 334 8.5E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02140 26f2385f9f70486c837f6a8d3aaf1057 357 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 143 350 1.1E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02140 26f2385f9f70486c837f6a8d3aaf1057 357 Gene3D G3DSA:1.10.3720.10 120 342 1.9E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02140 26f2385f9f70486c837f6a8d3aaf1057 357 PANTHER PTHR30465 61 352 1.6E-208 T 23-04-2016 LT40_RS02140 26f2385f9f70486c837f6a8d3aaf1057 357 PANTHER PTHR30465 1 45 1.6E-208 T 23-04-2016 LT40_RS02140 26f2385f9f70486c837f6a8d3aaf1057 357 PANTHER PTHR30465:SF66 61 352 1.6E-208 T 23-04-2016 LT40_RS02140 26f2385f9f70486c837f6a8d3aaf1057 357 PANTHER PTHR30465:SF66 1 45 1.6E-208 T 23-04-2016 LT40_RS16425 fda8331071e4f0a446dcbd04521159ff 93 SMART SM00411 1 90 2.0E-39 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS16425 fda8331071e4f0a446dcbd04521159ff 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LT40_RS16425 fda8331071e4f0a446dcbd04521159ff 93 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.0E-33 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS16425 fda8331071e4f0a446dcbd04521159ff 93 PANTHER PTHR33175 1 90 1.4E-39 T 23-04-2016 LT40_RS16425 fda8331071e4f0a446dcbd04521159ff 93 Gene3D G3DSA:4.10.520.10 1 91 1.2E-35 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LT40_RS16425 fda8331071e4f0a446dcbd04521159ff 93 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.7E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS16425 fda8331071e4f0a446dcbd04521159ff 93 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.7E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS16425 fda8331071e4f0a446dcbd04521159ff 93 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.7E-16 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 LT40_RS16425 fda8331071e4f0a446dcbd04521159ff 93 SUPERFAMILY SSF47729 1 91 2.94E-32 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LT40_RS06340 f1070d8d3cc02f2d659eb99b43eb5be7 449 Pfam PF03972 MmgE/PrpD family 4 439 1.1E-133 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 LT40_RS06340 f1070d8d3cc02f2d659eb99b43eb5be7 449 SUPERFAMILY SSF103378 2 444 1.96E-118 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 LT40_RS06340 f1070d8d3cc02f2d659eb99b43eb5be7 449 Gene3D G3DSA:3.30.1330.120 265 400 1.5E-25 T 23-04-2016 LT40_RS06340 f1070d8d3cc02f2d659eb99b43eb5be7 449 PANTHER PTHR16943:SF8 1 449 2.0E-158 T 23-04-2016 LT40_RS06340 f1070d8d3cc02f2d659eb99b43eb5be7 449 PANTHER PTHR16943 1 449 2.0E-158 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 LT40_RS07925 1fe622cbbc765958d79c75a7a6b144ab 216 Pfam PF01799 [2Fe-2S] binding domain 120 207 3.0E-28 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS07925 1fe622cbbc765958d79c75a7a6b144ab 216 Gene3D G3DSA:1.10.150.120 122 212 1.9E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS07925 1fe622cbbc765958d79c75a7a6b144ab 216 PANTHER PTHR11908 46 207 1.3E-40 T 23-04-2016 LT40_RS07925 1fe622cbbc765958d79c75a7a6b144ab 216 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 52 101 3.0E-10 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS07925 1fe622cbbc765958d79c75a7a6b144ab 216 SUPERFAMILY SSF54292 48 134 2.88E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS07925 1fe622cbbc765958d79c75a7a6b144ab 216 PANTHER PTHR11908:SF66 46 207 1.3E-40 T 23-04-2016 LT40_RS07925 1fe622cbbc765958d79c75a7a6b144ab 216 Gene3D G3DSA:3.10.20.30 48 121 6.2E-33 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS07925 1fe622cbbc765958d79c75a7a6b144ab 216 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 86 94 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LT40_RS07925 1fe622cbbc765958d79c75a7a6b144ab 216 SUPERFAMILY SSF47741 131 212 7.46E-26 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS18355 5bb15444278820a5fcf0f21fc15dcea5 211 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 207 39.728 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18355 5bb15444278820a5fcf0f21fc15dcea5 211 SUPERFAMILY SSF50447 1 208 2.12E-80 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain LT40_RS18355 5bb15444278820a5fcf0f21fc15dcea5 211 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 23-04-2016 IPR019926 Ribosomal protein L3, conserved site LT40_RS18355 5bb15444278820a5fcf0f21fc15dcea5 211 Gene3D G3DSA:4.10.960.10 78 157 1.3E-33 T 23-04-2016 LT40_RS18355 5bb15444278820a5fcf0f21fc15dcea5 211 PANTHER PTHR11229 1 208 1.7E-118 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18355 5bb15444278820a5fcf0f21fc15dcea5 211 Pfam PF00297 Ribosomal protein L3 47 182 3.3E-16 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18355 5bb15444278820a5fcf0f21fc15dcea5 211 Gene3D G3DSA:2.40.30.10 4 33 4.9E-9 T 23-04-2016 LT40_RS18355 5bb15444278820a5fcf0f21fc15dcea5 211 Gene3D G3DSA:2.40.30.10 158 207 4.9E-9 T 23-04-2016 LT40_RS18355 5bb15444278820a5fcf0f21fc15dcea5 211 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 204 1.0E-90 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS00455 63e86e7457b4d5a45c1f8947b2931c05 171 SUPERFAMILY SSF111384 25 168 1.44E-28 T 23-04-2016 IPR024930 Skp domain LT40_RS00455 63e86e7457b4d5a45c1f8947b2931c05 171 Gene3D G3DSA:3.30.910.20 100 168 7.1E-16 T 23-04-2016 LT40_RS00455 63e86e7457b4d5a45c1f8947b2931c05 171 Gene3D G3DSA:3.30.910.20 16 62 7.1E-16 T 23-04-2016 LT40_RS00455 63e86e7457b4d5a45c1f8947b2931c05 171 PANTHER PTHR35089 6 171 4.6E-41 T 23-04-2016 LT40_RS00455 63e86e7457b4d5a45c1f8947b2931c05 171 PANTHER PTHR35089:SF1 6 171 4.6E-41 T 23-04-2016 LT40_RS00455 63e86e7457b4d5a45c1f8947b2931c05 171 SMART SM00935 14 168 2.9E-35 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 LT40_RS00455 63e86e7457b4d5a45c1f8947b2931c05 171 Pfam PF03938 Outer membrane protein (OmpH-like) 11 167 4.4E-22 T 23-04-2016 IPR005632 Chaperone protein Skp GO:0051082 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 Gene3D G3DSA:1.10.287.610 100 152 1.7E-25 T 23-04-2016 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 1.3E-104 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.665 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.1E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 SUPERFAMILY SSF52313 6 231 6.67E-96 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 Gene3D G3DSA:3.40.50.10490 23 99 6.5E-65 T 23-04-2016 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 Gene3D G3DSA:3.40.50.10490 158 233 6.5E-65 T 23-04-2016 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 Pfam PF00318 Ribosomal protein S2 9 224 8.3E-95 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 LT40_RS00410 c7bc6f96997601c92ef05ac0312dac8b 246 PANTHER PTHR12534 1 225 6.6E-117 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LT40_RS01460 d83d27e18663b7cb2ffb0080ae509d8c 127 Gene3D G3DSA:3.30.429.20 64 121 1.2E-6 T 23-04-2016 LT40_RS01460 d83d27e18663b7cb2ffb0080ae509d8c 127 Gene3D G3DSA:3.30.429.20 1 55 1.6E-9 T 23-04-2016 LT40_RS01460 d83d27e18663b7cb2ffb0080ae509d8c 127 Pfam PF01361 Tautomerase enzyme 13 57 1.1E-6 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 LT40_RS01460 d83d27e18663b7cb2ffb0080ae509d8c 127 SUPERFAMILY SSF55331 2 121 1.32E-14 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 Pfam PF00732 GMC oxidoreductase 3 297 3.1E-61 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 Gene3D G3DSA:3.50.50.60 188 315 4.7E-92 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 Gene3D G3DSA:3.50.50.60 491 556 4.7E-92 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 Gene3D G3DSA:3.50.50.60 2 124 4.7E-92 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 SUPERFAMILY SSF54373 468 498 7.22E-12 T 23-04-2016 LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 SUPERFAMILY SSF54373 347 427 7.22E-12 T 23-04-2016 LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 PANTHER PTHR11552 3 441 1.0E-131 T 23-04-2016 LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 PANTHER PTHR11552 479 556 1.0E-131 T 23-04-2016 LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 SUPERFAMILY SSF51905 497 556 3.15E-63 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 SUPERFAMILY SSF51905 3 290 3.15E-63 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15230 1dc0d590cae25ad04dbe0a6f2cc1f301 557 Pfam PF05199 GMC oxidoreductase 365 550 4.8E-36 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Gene3D G3DSA:3.30.1490.20 200 241 4.6E-28 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Gene3D G3DSA:3.30.1490.20 130 153 4.6E-28 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 PANTHER PTHR32282 2 944 0.0 T 23-04-2016 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 PANTHER PTHR32282:SF2 2 944 0.0 T 23-04-2016 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.75 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Gene3D G3DSA:1.20.1580.10 693 819 6.4E-53 T 23-04-2016 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Gene3D G3DSA:1.20.1580.10 406 476 8.9E-53 T 23-04-2016 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Gene3D G3DSA:1.20.1580.10 91 129 8.9E-53 T 23-04-2016 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Gene3D G3DSA:1.20.1580.10 251 284 8.9E-53 T 23-04-2016 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 SUPERFAMILY SSF52540 456 568 5.24E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 SUPERFAMILY SSF52540 8 204 5.24E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 SUPERFAMILY SSF52540 614 909 9.35E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Gene3D G3DSA:1.10.8.280 286 405 6.0E-40 T 23-04-2016 LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Gene3D G3DSA:3.40.50.300 477 596 6.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Gene3D G3DSA:3.40.50.300 603 673 1.2E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Gene3D G3DSA:3.40.50.300 3 89 6.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18495 ffd1a2644c70f47c618085f4d6e2dac4 944 Gene3D G3DSA:3.40.50.300 820 941 1.2E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09830 949f3d297e8bce838f4c834943be85fa 450 PANTHER PTHR30354:SF1 5 450 1.0E-238 T 23-04-2016 LT40_RS09830 949f3d297e8bce838f4c834943be85fa 450 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 15 450 7.9E-163 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LT40_RS09830 949f3d297e8bce838f4c834943be85fa 450 PANTHER PTHR30354 5 450 1.0E-238 T 23-04-2016 LT40_RS09830 949f3d297e8bce838f4c834943be85fa 450 Pfam PF02447 GntP family permease 10 449 2.3E-180 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LT40_RS09830 949f3d297e8bce838f4c834943be85fa 450 PIRSF PIRSF002746 5 450 9.1E-164 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 LT40_RS06605 36129bc865cb03257c7d78db6737d157 463 PANTHER PTHR11061 16 454 3.0E-113 T 23-04-2016 LT40_RS06605 36129bc865cb03257c7d78db6737d157 463 SUPERFAMILY SSF50249 14 75 1.54E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06605 36129bc865cb03257c7d78db6737d157 463 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 28 450 62.665 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LT40_RS06605 36129bc865cb03257c7d78db6737d157 463 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 272 442 9.3E-58 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LT40_RS06605 36129bc865cb03257c7d78db6737d157 463 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 432 442 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site LT40_RS06605 36129bc865cb03257c7d78db6737d157 463 PANTHER PTHR11061:SF30 16 454 3.0E-113 T 23-04-2016 LT40_RS06605 36129bc865cb03257c7d78db6737d157 463 SUPERFAMILY SSF53335 86 448 2.29E-76 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS06605 36129bc865cb03257c7d78db6737d157 463 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 272 446 9.8E-25 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LT40_RS06605 36129bc865cb03257c7d78db6737d157 463 Gene3D G3DSA:2.40.50.140 19 97 8.8E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS06605 36129bc865cb03257c7d78db6737d157 463 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 411 - T 23-04-2016 IPR030390 RNA methyltransferase TrmA, active site LT40_RS06605 36129bc865cb03257c7d78db6737d157 463 Gene3D G3DSA:3.40.50.150 271 448 1.7E-57 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS06505 09f11118bfdb2e326dc65912895db639 541 Pfam PF00672 HAMP domain 192 256 6.6E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS06505 09f11118bfdb2e326dc65912895db639 541 PANTHER PTHR32089:SF64 176 540 3.0E-121 T 23-04-2016 LT40_RS06505 09f11118bfdb2e326dc65912895db639 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 536 2.8E-49 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS06505 09f11118bfdb2e326dc65912895db639 541 SMART SM00304 211 263 1.0E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS06505 09f11118bfdb2e326dc65912895db639 541 SUPERFAMILY SSF58104 235 539 4.32E-72 T 23-04-2016 LT40_RS06505 09f11118bfdb2e326dc65912895db639 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 1.5E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS06505 09f11118bfdb2e326dc65912895db639 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 1.5E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS06505 09f11118bfdb2e326dc65912895db639 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 1.5E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS06505 09f11118bfdb2e326dc65912895db639 541 PANTHER PTHR32089 176 540 3.0E-121 T 23-04-2016 LT40_RS06505 09f11118bfdb2e326dc65912895db639 541 Gene3D G3DSA:1.10.287.950 293 510 2.1E-58 T 23-04-2016 LT40_RS06505 09f11118bfdb2e326dc65912895db639 541 SMART SM00283 278 539 5.5E-76 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS00790 084c538e6ffb455b175ee43c98280e52 158 Pfam PF02810 SEC-C motif 136 153 6.0E-8 T 23-04-2016 IPR004027 SEC-C motif LT40_RS00790 084c538e6ffb455b175ee43c98280e52 158 PANTHER PTHR33747 1 154 9.8E-22 T 23-04-2016 LT40_RS00790 084c538e6ffb455b175ee43c98280e52 158 SUPERFAMILY SSF54427 25 130 2.45E-31 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS00790 084c538e6ffb455b175ee43c98280e52 158 Gene3D G3DSA:3.10.450.50 4 154 6.7E-51 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS00790 084c538e6ffb455b175ee43c98280e52 158 SUPERFAMILY SSF103642 133 155 4.71E-7 T 23-04-2016 LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 Pfam PF01835 MG2 domain 379 471 7.0E-20 T 23-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 PIRSF PIRSF038980 5 1634 0.0 T 23-04-2016 IPR026284 Alpha-2-macroglobulin domain protein, bacteria LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 PANTHER PTHR11412 243 629 4.7E-192 T 23-04-2016 LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 PANTHER PTHR11412 645 940 4.7E-192 T 23-04-2016 LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 SUPERFAMILY SSF48239 1154 1411 1.31E-41 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 280 372 9.5E-21 T 23-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1162 1179 1.2E-4 T 23-04-2016 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 PANTHER PTHR11412:SF104 1615 1622 4.7E-192 T 23-04-2016 LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 PANTHER PTHR11412:SF104 645 940 4.7E-192 T 23-04-2016 LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 SMART SM01359 736 884 1.7E-36 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 PANTHER PTHR11412 1615 1622 4.7E-192 T 23-04-2016 LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 Gene3D G3DSA:1.50.10.20 1154 1411 5.2E-37 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 PANTHER PTHR11412:SF104 243 629 4.7E-192 T 23-04-2016 LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 737 884 8.0E-12 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 Pfam PF00207 Alpha-2-macroglobulin family 955 1036 2.4E-10 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 LT40_RS13400 2c79ff24ecaaeb0ad6294f519fc96331 1634 SMART SM01360 947 1036 1.6E-27 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 LT40_RS08335 c9a06bdc5f404f3028a75621a02d178e 105 SMART SM00830 17 96 1.7E-20 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS08335 c9a06bdc5f404f3028a75621a02d178e 105 PANTHER PTHR38041 7 104 5.7E-17 T 23-04-2016 LT40_RS08335 c9a06bdc5f404f3028a75621a02d178e 105 PIRSF PIRSF029775 1 103 3.6E-38 T 23-04-2016 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00025 LT40_RS08335 c9a06bdc5f404f3028a75621a02d178e 105 SUPERFAMILY SSF48600 6 97 1.53E-22 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS08335 c9a06bdc5f404f3028a75621a02d178e 105 Gene3D G3DSA:1.20.59.10 8 93 1.6E-12 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS08335 c9a06bdc5f404f3028a75621a02d178e 105 Pfam PF01817 Chorismate mutase type II 17 93 1.1E-12 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS08335 c9a06bdc5f404f3028a75621a02d178e 105 TIGRFAM TIGR01803 CM-like: chorismate mutase related enzymes 13 93 8.6E-24 T 23-04-2016 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00025 LT40_RS11645 3e36d40f1ff428b41ffa26aa45bccfb7 269 SUPERFAMILY SSF161098 10 264 2.99E-57 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11645 3e36d40f1ff428b41ffa26aa45bccfb7 269 PANTHER PTHR30193:SF20 7 265 3.2E-70 T 23-04-2016 LT40_RS11645 3e36d40f1ff428b41ffa26aa45bccfb7 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 264 2.1E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11645 3e36d40f1ff428b41ffa26aa45bccfb7 269 PANTHER PTHR30193 7 265 3.2E-70 T 23-04-2016 LT40_RS11645 3e36d40f1ff428b41ffa26aa45bccfb7 269 Gene3D G3DSA:1.10.3720.10 18 265 3.2E-52 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 PANTHER PTHR12815:SF11 679 790 2.2E-255 T 23-04-2016 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 PANTHER PTHR12815:SF11 3 663 2.2E-255 T 23-04-2016 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 Pfam PF01103 Surface antigen 447 790 1.7E-95 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 PIRSF PIRSF006076 1 790 4.2E-265 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 PANTHER PTHR12815 679 790 2.2E-255 T 23-04-2016 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 PANTHER PTHR12815 3 663 2.2E-255 T 23-04-2016 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 23 790 1.4E-264 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 Pfam PF07244 Surface antigen variable number repeat 92 171 8.2E-14 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 Pfam PF07244 Surface antigen variable number repeat 175 262 3.3E-18 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 Pfam PF07244 Surface antigen variable number repeat 265 343 2.0E-13 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 Pfam PF07244 Surface antigen variable number repeat 347 420 1.7E-13 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 Gene3D G3DSA:2.40.160.50 404 790 6.2E-26 T 23-04-2016 LT40_RS00450 e85f51ba1fbca0eff1814747d88f652a 790 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 790 25.829 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 LT40_RS19445 bbd1a96d7a8b3dafd76f11e507e812a9 311 Pfam PF06574 FAD synthetase 12 166 2.2E-54 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 LT40_RS19445 bbd1a96d7a8b3dafd76f11e507e812a9 311 PANTHER PTHR22749:SF0 1 306 1.1E-132 T 23-04-2016 LT40_RS19445 bbd1a96d7a8b3dafd76f11e507e812a9 311 Gene3D G3DSA:3.40.50.620 1 179 5.7E-67 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS19445 bbd1a96d7a8b3dafd76f11e507e812a9 311 SMART SM00904 183 307 9.6E-61 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 LT40_RS19445 bbd1a96d7a8b3dafd76f11e507e812a9 311 PIRSF PIRSF004491 1 311 6.4E-105 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 LT40_RS19445 bbd1a96d7a8b3dafd76f11e507e812a9 311 Pfam PF01687 Riboflavin kinase 184 304 1.1E-36 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 LT40_RS19445 bbd1a96d7a8b3dafd76f11e507e812a9 311 SUPERFAMILY SSF52374 15 175 9.01E-33 T 23-04-2016 LT40_RS19445 bbd1a96d7a8b3dafd76f11e507e812a9 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 304 4.4E-96 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 LT40_RS19445 bbd1a96d7a8b3dafd76f11e507e812a9 311 Gene3D G3DSA:2.40.30.30 180 309 3.3E-39 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 LT40_RS19445 bbd1a96d7a8b3dafd76f11e507e812a9 311 PANTHER PTHR22749 1 306 1.1E-132 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 LT40_RS19445 bbd1a96d7a8b3dafd76f11e507e812a9 311 SUPERFAMILY SSF82114 175 308 1.16E-43 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 LT40_RS11725 78a8f34a1683065144ce2179bef93dee 349 SUPERFAMILY SSF55347 144 306 1.6E-16 T 23-04-2016 LT40_RS11725 78a8f34a1683065144ce2179bef93dee 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 147 233 2.6E-5 T 23-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 LT40_RS11725 78a8f34a1683065144ce2179bef93dee 349 PANTHER PTHR22604 15 344 4.0E-35 T 23-04-2016 LT40_RS11725 78a8f34a1683065144ce2179bef93dee 349 SUPERFAMILY SSF51735 1 143 2.44E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11725 78a8f34a1683065144ce2179bef93dee 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 23 117 7.2E-10 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 LT40_RS11725 78a8f34a1683065144ce2179bef93dee 349 Gene3D G3DSA:3.30.360.10 157 329 2.1E-25 T 23-04-2016 LT40_RS11725 78a8f34a1683065144ce2179bef93dee 349 Gene3D G3DSA:3.40.50.720 19 133 1.5E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19595 008e5f03e6ada281dbce27967076974e 566 Gene3D G3DSA:3.30.450.90 167 290 2.3E-50 T 23-04-2016 LT40_RS19595 008e5f03e6ada281dbce27967076974e 566 SUPERFAMILY SSF52540 177 564 9.59E-97 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19595 008e5f03e6ada281dbce27967076974e 566 PANTHER PTHR30258:SF1 1 565 1.9E-256 T 23-04-2016 LT40_RS19595 008e5f03e6ada281dbce27967076974e 566 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 8 566 1.5E-254 T 23-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 LT40_RS19595 008e5f03e6ada281dbce27967076974e 566 Pfam PF00437 Type II/IV secretion system protein 190 457 3.5E-88 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LT40_RS19595 008e5f03e6ada281dbce27967076974e 566 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 146 1.3E-16 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 LT40_RS19595 008e5f03e6ada281dbce27967076974e 566 PANTHER PTHR30258 1 565 1.9E-256 T 23-04-2016 LT40_RS19595 008e5f03e6ada281dbce27967076974e 566 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 385 399 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LT40_RS19595 008e5f03e6ada281dbce27967076974e 566 SUPERFAMILY SSF160246 4 143 3.66E-35 T 23-04-2016 LT40_RS19595 008e5f03e6ada281dbce27967076974e 566 Gene3D G3DSA:3.40.50.300 298 565 3.0E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18775 3e24738ecac18b9eb88840e29b10c3e5 439 PANTHER PTHR30353:SF5 1 415 9.8E-167 T 23-04-2016 LT40_RS18775 3e24738ecac18b9eb88840e29b10c3e5 439 Pfam PF01569 PAP2 superfamily 284 398 1.2E-21 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LT40_RS18775 3e24738ecac18b9eb88840e29b10c3e5 439 Gene3D G3DSA:1.20.144.10 232 403 4.7E-30 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LT40_RS18775 3e24738ecac18b9eb88840e29b10c3e5 439 PANTHER PTHR30353 1 415 9.8E-167 T 23-04-2016 IPR032818 DedA family LT40_RS18775 3e24738ecac18b9eb88840e29b10c3e5 439 Pfam PF09335 SNARE associated Golgi protein 39 162 1.2E-17 T 23-04-2016 IPR032816 SNARE associated Golgi protein LT40_RS18775 3e24738ecac18b9eb88840e29b10c3e5 439 SUPERFAMILY SSF48317 207 405 4.06E-37 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LT40_RS18775 3e24738ecac18b9eb88840e29b10c3e5 439 SMART SM00014 283 393 7.2E-23 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LT40_RS14875 0fe56fb8e32612165bf7748084f4daf5 245 Gene3D G3DSA:3.20.20.70 1 240 2.9E-88 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS14875 0fe56fb8e32612165bf7748084f4daf5 245 Pfam PF00977 Histidine biosynthesis protein 3 231 2.0E-78 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 LT40_RS14875 0fe56fb8e32612165bf7748084f4daf5 245 PANTHER PTHR21235:SF15 1 239 3.2E-105 T 23-04-2016 LT40_RS14875 0fe56fb8e32612165bf7748084f4daf5 245 SUPERFAMILY SSF51366 1 240 1.1E-75 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LT40_RS14875 0fe56fb8e32612165bf7748084f4daf5 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 1.2E-77 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 LT40_RS14875 0fe56fb8e32612165bf7748084f4daf5 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 35.678 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 LT40_RS14875 0fe56fb8e32612165bf7748084f4daf5 245 PANTHER PTHR21235 1 239 3.2E-105 T 23-04-2016 LT40_RS16510 370cd30e788e20a7b5c156c739cadfba 213 SUPERFAMILY SSF53271 1 211 1.23E-49 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS16510 370cd30e788e20a7b5c156c739cadfba 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 186 6.0E-63 T 23-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS16510 370cd30e788e20a7b5c156c739cadfba 213 PANTHER PTHR19278 1 213 4.1E-130 T 23-04-2016 LT40_RS16510 370cd30e788e20a7b5c156c739cadfba 213 Pfam PF00156 Phosphoribosyl transferase domain 42 158 8.4E-14 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LT40_RS16510 370cd30e788e20a7b5c156c739cadfba 213 Gene3D G3DSA:3.40.50.2020 7 212 1.2E-81 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS16510 370cd30e788e20a7b5c156c739cadfba 213 PANTHER PTHR19278:SF36 1 213 4.1E-130 T 23-04-2016 LT40_RS16510 370cd30e788e20a7b5c156c739cadfba 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.498 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS12095 608985d3c288bfc21c4321fcc08c9c20 416 PANTHER PTHR30489 1 416 4.6E-122 T 23-04-2016 LT40_RS12095 608985d3c288bfc21c4321fcc08c9c20 416 PANTHER PTHR30489:SF8 1 416 4.6E-122 T 23-04-2016 LT40_RS12095 608985d3c288bfc21c4321fcc08c9c20 416 Pfam PF12704 MacB-like periplasmic core domain 27 192 8.8E-16 T 23-04-2016 IPR025857 MacB-like periplasmic core domain LT40_RS12095 608985d3c288bfc21c4321fcc08c9c20 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 416 5.3E-167 T 23-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 LT40_RS12095 608985d3c288bfc21c4321fcc08c9c20 416 Pfam PF02687 FtsX-like permease family 276 409 2.2E-21 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LT40_RS10270 d7cb2b3e07f4cb11b48b983c3050b3db 340 Pfam PF01757 Acyltransferase family 4 310 2.7E-26 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LT40_RS10270 d7cb2b3e07f4cb11b48b983c3050b3db 340 PANTHER PTHR23028 1 326 5.6E-22 T 23-04-2016 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 PANTHER PTHR11735:SF6 1 340 1.3E-164 T 23-04-2016 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 Pfam PF00814 Glycoprotease family 24 311 2.3E-102 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 1.9E-120 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 SUPERFAMILY SSF53067 3 122 3.67E-32 T 23-04-2016 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 4.4E-134 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 61.814 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.1E-52 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.1E-52 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.1E-52 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.1E-52 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.1E-52 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.1E-52 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 Gene3D G3DSA:3.30.420.40 1 159 1.1E-50 T 23-04-2016 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 PANTHER PTHR11735 1 340 1.3E-164 T 23-04-2016 LT40_RS18025 8e180cf04ce7143b3032290db43a8c4b 341 SUPERFAMILY SSF53067 101 313 5.88E-44 T 23-04-2016 LT40_RS16150 d0f206731b0c19473ba61f0c94b47f43 176 PANTHER PTHR41386:SF1 38 161 2.6E-32 T 23-04-2016 LT40_RS16150 d0f206731b0c19473ba61f0c94b47f43 176 PANTHER PTHR41386 38 161 2.6E-32 T 23-04-2016 LT40_RS16150 d0f206731b0c19473ba61f0c94b47f43 176 Pfam PF06210 Protein of unknown function (DUF1003) 65 157 1.1E-35 T 23-04-2016 IPR010406 Protein of unknown function DUF1003 LT40_RS20085 7187f91124c440b88373016009e0ee19 155 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 128 2.5E-20 T 23-04-2016 IPR000014 PAS domain LT40_RS20085 7187f91124c440b88373016009e0ee19 155 SUPERFAMILY SSF55785 10 120 6.63E-26 T 23-04-2016 IPR000014 PAS domain LT40_RS20085 7187f91124c440b88373016009e0ee19 155 SMART SM00086 80 122 1.6E-9 T 23-04-2016 IPR001610 PAC motif LT40_RS20085 7187f91124c440b88373016009e0ee19 155 Pfam PF13426 PAS domain 16 120 1.2E-19 T 23-04-2016 IPR000014 PAS domain LT40_RS20085 7187f91124c440b88373016009e0ee19 155 SMART SM00091 5 74 3.5E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS20085 7187f91124c440b88373016009e0ee19 155 PANTHER PTHR24351 27 141 2.0E-24 T 23-04-2016 LT40_RS20085 7187f91124c440b88373016009e0ee19 155 Gene3D G3DSA:3.30.450.20 16 120 4.7E-31 T 23-04-2016 LT40_RS02120 90fd085fb87cafd8382f71cdfe01fedc 624 PANTHER PTHR10657 1 166 1.0E-131 T 23-04-2016 LT40_RS02120 90fd085fb87cafd8382f71cdfe01fedc 624 PANTHER PTHR10657 199 515 1.0E-131 T 23-04-2016 LT40_RS02120 90fd085fb87cafd8382f71cdfe01fedc 624 PANTHER PTHR10657:SF11 1 166 1.0E-131 T 23-04-2016 LT40_RS02120 90fd085fb87cafd8382f71cdfe01fedc 624 PANTHER PTHR10657:SF11 199 515 1.0E-131 T 23-04-2016 LT40_RS02120 90fd085fb87cafd8382f71cdfe01fedc 624 Gene3D G3DSA:3.10.50.40 261 385 1.1E-40 T 23-04-2016 LT40_RS02120 90fd085fb87cafd8382f71cdfe01fedc 624 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 300 321 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LT40_RS02120 90fd085fb87cafd8382f71cdfe01fedc 624 Pfam PF13624 SurA N-terminal domain 1 163 2.8E-43 T 23-04-2016 LT40_RS02120 90fd085fb87cafd8382f71cdfe01fedc 624 SUPERFAMILY SSF54534 262 363 1.05E-32 T 23-04-2016 LT40_RS02120 90fd085fb87cafd8382f71cdfe01fedc 624 Pfam PF00639 PPIC-type PPIASE domain 269 361 1.9E-28 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 LT40_RS02120 90fd085fb87cafd8382f71cdfe01fedc 624 SUPERFAMILY SSF109998 199 235 8.63E-30 T 23-04-2016 IPR027304 Trigger factor/SurA domain LT40_RS02120 90fd085fb87cafd8382f71cdfe01fedc 624 SUPERFAMILY SSF109998 41 167 8.63E-30 T 23-04-2016 IPR027304 Trigger factor/SurA domain LT40_RS08155 e7b6a61b552ba1bebc20a413c389190f 305 SMART SM01130 6 294 3.5E-85 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08155 e7b6a61b552ba1bebc20a413c389190f 305 PANTHER PTHR12128 3 293 8.2E-94 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08155 e7b6a61b552ba1bebc20a413c389190f 305 Gene3D G3DSA:3.20.20.70 5 293 1.3E-84 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS08155 e7b6a61b552ba1bebc20a413c389190f 305 SUPERFAMILY SSF51569 3 292 4.92E-79 T 23-04-2016 LT40_RS08155 e7b6a61b552ba1bebc20a413c389190f 305 PANTHER PTHR12128:SF15 3 293 8.2E-94 T 23-04-2016 LT40_RS08155 e7b6a61b552ba1bebc20a413c389190f 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 2.9E-8 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08155 e7b6a61b552ba1bebc20a413c389190f 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 2.9E-8 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08155 e7b6a61b552ba1bebc20a413c389190f 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 2.9E-8 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08155 e7b6a61b552ba1bebc20a413c389190f 305 PIRSF PIRSF001365 2 301 2.5E-73 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS08155 e7b6a61b552ba1bebc20a413c389190f 305 Pfam PF00701 Dihydrodipicolinate synthetase family 8 291 2.5E-57 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 LT40_RS06245 dc49a1719dabc7a54f8c59cb1aa12f66 365 PANTHER PTHR11482:SF38 2 365 2.1E-132 T 23-04-2016 LT40_RS06245 dc49a1719dabc7a54f8c59cb1aa12f66 365 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 270 341 8.1E-8 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS06245 dc49a1719dabc7a54f8c59cb1aa12f66 365 SUPERFAMILY SSF51419 10 239 2.45E-44 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS06245 dc49a1719dabc7a54f8c59cb1aa12f66 365 SUPERFAMILY SSF50621 207 354 5.65E-28 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS06245 dc49a1719dabc7a54f8c59cb1aa12f66 365 Gene3D G3DSA:3.20.20.10 29 231 2.8E-18 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS06245 dc49a1719dabc7a54f8c59cb1aa12f66 365 PANTHER PTHR11482 2 365 2.1E-132 T 23-04-2016 LT40_RS06245 dc49a1719dabc7a54f8c59cb1aa12f66 365 PIRSF PIRSF038941 1 365 1.4E-140 T 23-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 LT40_RS06245 dc49a1719dabc7a54f8c59cb1aa12f66 365 Gene3D G3DSA:2.40.37.10 232 342 1.3E-17 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS10445 c82a6ae524c55c43b5d24861e348c476 315 PANTHER PTHR30465:SF0 5 314 6.5E-107 T 23-04-2016 LT40_RS10445 c82a6ae524c55c43b5d24861e348c476 315 SUPERFAMILY SSF161098 91 296 2.62E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10445 c82a6ae524c55c43b5d24861e348c476 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 313 9.8E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10445 c82a6ae524c55c43b5d24861e348c476 315 Gene3D G3DSA:1.10.3720.10 90 311 2.7E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10445 c82a6ae524c55c43b5d24861e348c476 315 PANTHER PTHR30465 5 314 6.5E-107 T 23-04-2016 LT40_RS07555 90296c94bd86e4c7a416735734e2693f 287 SUPERFAMILY SSF56281 10 249 2.03E-44 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS07555 90296c94bd86e4c7a416735734e2693f 287 SMART SM00849 15 205 2.1E-18 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS07555 90296c94bd86e4c7a416735734e2693f 287 Pfam PF00753 Metallo-beta-lactamase superfamily 13 205 2.1E-19 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS07555 90296c94bd86e4c7a416735734e2693f 287 PANTHER PTHR11935 1 274 1.2E-104 T 23-04-2016 LT40_RS07555 90296c94bd86e4c7a416735734e2693f 287 Gene3D G3DSA:3.60.15.10 8 247 6.8E-48 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS07555 90296c94bd86e4c7a416735734e2693f 287 PANTHER PTHR11935:SF110 1 274 1.2E-104 T 23-04-2016 LT40_RS17290 de4e1751de7449794f6f7485d883b24d 429 Pfam PF03573 outer membrane porin, OprD family 28 428 6.6E-132 T 23-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 LT40_RS17290 de4e1751de7449794f6f7485d883b24d 429 PANTHER PTHR34596 1 429 2.3E-132 T 23-04-2016 LT40_RS17290 de4e1751de7449794f6f7485d883b24d 429 Gene3D G3DSA:2.40.160.10 33 429 1.6E-127 T 23-04-2016 IPR023614 Porin domain LT40_RS16010 d8a58c5f47ad3e766e9a226c9a86a871 539 PANTHER PTHR23508 17 340 5.5E-231 T 23-04-2016 LT40_RS16010 d8a58c5f47ad3e766e9a226c9a86a871 539 PANTHER PTHR23508 439 539 5.5E-231 T 23-04-2016 LT40_RS16010 d8a58c5f47ad3e766e9a226c9a86a871 539 PANTHER PTHR23508:SF7 17 340 5.5E-231 T 23-04-2016 LT40_RS16010 d8a58c5f47ad3e766e9a226c9a86a871 539 PANTHER PTHR23508:SF7 439 539 5.5E-231 T 23-04-2016 LT40_RS16010 d8a58c5f47ad3e766e9a226c9a86a871 539 SUPERFAMILY SSF103473 18 339 3.01E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS16010 d8a58c5f47ad3e766e9a226c9a86a871 539 SUPERFAMILY SSF103473 441 537 3.01E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS16010 d8a58c5f47ad3e766e9a226c9a86a871 539 ProSitePatterns PS00217 Sugar transport proteins signature 2. 132 157 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS16010 d8a58c5f47ad3e766e9a226c9a86a871 539 Pfam PF00083 Sugar (and other) transporter 25 233 3.3E-29 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS16010 d8a58c5f47ad3e766e9a226c9a86a871 539 Gene3D G3DSA:1.20.1250.20 437 535 5.4E-24 T 23-04-2016 LT40_RS16010 d8a58c5f47ad3e766e9a226c9a86a871 539 Gene3D G3DSA:1.20.1250.20 250 338 5.4E-24 T 23-04-2016 LT40_RS16010 d8a58c5f47ad3e766e9a226c9a86a871 539 Gene3D G3DSA:1.20.1250.20 20 226 1.3E-22 T 23-04-2016 LT40_RS04695 9eb2650ca81fde9e42bf14fbc55b94da 156 PANTHER PTHR11717 1 149 1.4E-29 T 23-04-2016 LT40_RS04695 9eb2650ca81fde9e42bf14fbc55b94da 156 Gene3D G3DSA:3.40.50.270 1 134 7.3E-33 T 23-04-2016 LT40_RS04695 9eb2650ca81fde9e42bf14fbc55b94da 156 SMART SM00226 1 136 4.5E-32 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily LT40_RS04695 9eb2650ca81fde9e42bf14fbc55b94da 156 SUPERFAMILY SSF52788 1 135 3.01E-32 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily LT40_RS04695 9eb2650ca81fde9e42bf14fbc55b94da 156 PANTHER PTHR11717:SF18 1 149 1.4E-29 T 23-04-2016 LT40_RS04695 9eb2650ca81fde9e42bf14fbc55b94da 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 134 6.5E-19 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily LT40_RS06205 63aa5ce60ad84a9f0bc68d6485cdd127 371 Pfam PF00795 Carbon-nitrogen hydrolase 164 278 6.3E-7 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS06205 63aa5ce60ad84a9f0bc68d6485cdd127 371 SUPERFAMILY SSF56317 73 110 5.36E-21 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS06205 63aa5ce60ad84a9f0bc68d6485cdd127 371 SUPERFAMILY SSF56317 150 284 5.36E-21 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS06205 63aa5ce60ad84a9f0bc68d6485cdd127 371 PANTHER PTHR23088:SF15 39 110 3.5E-43 T 23-04-2016 LT40_RS06205 63aa5ce60ad84a9f0bc68d6485cdd127 371 PANTHER PTHR23088:SF15 146 371 3.5E-43 T 23-04-2016 LT40_RS06205 63aa5ce60ad84a9f0bc68d6485cdd127 371 Gene3D G3DSA:3.60.110.10 74 108 9.7E-22 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS06205 63aa5ce60ad84a9f0bc68d6485cdd127 371 Gene3D G3DSA:3.60.110.10 151 290 9.7E-22 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 LT40_RS06205 63aa5ce60ad84a9f0bc68d6485cdd127 371 PANTHER PTHR23088 39 110 3.5E-43 T 23-04-2016 LT40_RS06205 63aa5ce60ad84a9f0bc68d6485cdd127 371 PANTHER PTHR23088 146 371 3.5E-43 T 23-04-2016 LT40_RS18450 3b7e42a959ccab6d13a372f5c3b69563 144 PANTHER PTHR12934 1 144 1.5E-69 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 LT40_RS18450 3b7e42a959ccab6d13a372f5c3b69563 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 23-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18450 3b7e42a959ccab6d13a372f5c3b69563 144 SUPERFAMILY SSF52080 4 142 5.1E-45 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P LT40_RS18450 3b7e42a959ccab6d13a372f5c3b69563 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 1.2E-45 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 LT40_RS18450 3b7e42a959ccab6d13a372f5c3b69563 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 1.9E-29 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P LT40_RS18450 3b7e42a959ccab6d13a372f5c3b69563 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.449 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 LT40_RS18450 3b7e42a959ccab6d13a372f5c3b69563 144 Gene3D G3DSA:3.100.10.10 32 143 2.7E-25 T 23-04-2016 LT40_RS11730 8fb4a1d46ce8f9b18af44e7cfbe6e54a 170 PIRSF PIRSF029681 1 170 2.0E-48 T 23-04-2016 IPR018550 Lipid A 3-O-deacylase-related LT40_RS11730 8fb4a1d46ce8f9b18af44e7cfbe6e54a 170 SUPERFAMILY SSF56925 31 152 3.92E-5 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LT40_RS11730 8fb4a1d46ce8f9b18af44e7cfbe6e54a 170 Gene3D G3DSA:2.40.160.20 23 169 3.0E-47 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LT40_RS11730 8fb4a1d46ce8f9b18af44e7cfbe6e54a 170 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 33 168 8.3E-26 T 23-04-2016 IPR018550 Lipid A 3-O-deacylase-related LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 Gene3D G3DSA:3.30.420.10 3 156 6.2E-60 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 SUPERFAMILY SSF53098 3 156 3.19E-49 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 154 3.1E-59 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 23-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 PANTHER PTHR30194 1 169 5.5E-67 T 23-04-2016 LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 45.836 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 3.8E-39 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 3.8E-39 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 3.8E-39 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 3.8E-39 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 3.8E-39 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LT40_RS04945 05a9f77a1a48c5f6a8d331b005075ba3 174 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 5.4E-63 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 LT40_RS08520 671a6858cd95fdd4dd406de562cef945 343 PANTHER PTHR33376:SF4 3 343 6.0E-125 T 23-04-2016 LT40_RS08520 671a6858cd95fdd4dd406de562cef945 343 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 41 316 2.7E-75 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 LT40_RS08520 671a6858cd95fdd4dd406de562cef945 343 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 34 9.1E-5 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal LT40_RS08520 671a6858cd95fdd4dd406de562cef945 343 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 41 290 9.6E-71 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 LT40_RS08520 671a6858cd95fdd4dd406de562cef945 343 PIRSF PIRSF006470 7 339 6.4E-77 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 LT40_RS08520 671a6858cd95fdd4dd406de562cef945 343 PANTHER PTHR33376 3 343 6.0E-125 T 23-04-2016 LT40_RS15830 de1ab5cf087cdeacf111d0c312fcbdac 85 Pfam PF09526 Probable metal-binding protein (DUF2387) 3 77 1.8E-33 T 23-04-2016 IPR012658 Conserved hypothetical protein CHP02443 LT40_RS15830 de1ab5cf087cdeacf111d0c312fcbdac 85 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 51 1.5E-24 T 23-04-2016 IPR012658 Conserved hypothetical protein CHP02443 LT40_RS07325 11a638eb36110856a1e82774a41146b5 318 Gene3D G3DSA:3.40.50.720 3 114 4.4E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07325 11a638eb36110856a1e82774a41146b5 318 PANTHER PTHR10996:SF127 1 314 8.7E-117 T 23-04-2016 LT40_RS07325 11a638eb36110856a1e82774a41146b5 318 Gene3D G3DSA:3.40.50.720 115 287 1.8E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07325 11a638eb36110856a1e82774a41146b5 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LT40_RS07325 11a638eb36110856a1e82774a41146b5 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 312 7.2E-9 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LT40_RS07325 11a638eb36110856a1e82774a41146b5 318 PANTHER PTHR10996 1 314 8.7E-117 T 23-04-2016 LT40_RS07325 11a638eb36110856a1e82774a41146b5 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 286 5.9E-57 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LT40_RS07325 11a638eb36110856a1e82774a41146b5 318 SUPERFAMILY SSF51735 108 286 2.01E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS07325 11a638eb36110856a1e82774a41146b5 318 SUPERFAMILY SSF52283 3 127 1.59E-21 T 23-04-2016 LT40_RS07740 5b61bf10d8697111fe9fcf07f31bf401 348 Gene3D G3DSA:3.40.1690.10 217 343 4.0E-26 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal LT40_RS07740 5b61bf10d8697111fe9fcf07f31bf401 348 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 343 6.4E-82 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS07740 5b61bf10d8697111fe9fcf07f31bf401 348 PANTHER PTHR30531:SF7 6 342 4.9E-69 T 23-04-2016 LT40_RS07740 5b61bf10d8697111fe9fcf07f31bf401 348 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.4E-21 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS07740 5b61bf10d8697111fe9fcf07f31bf401 348 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 207 225 1.4E-21 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS07740 5b61bf10d8697111fe9fcf07f31bf401 348 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 271 286 1.4E-21 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS07740 5b61bf10d8697111fe9fcf07f31bf401 348 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 244 1.4E-21 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS07740 5b61bf10d8697111fe9fcf07f31bf401 348 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 1.4E-21 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS07740 5b61bf10d8697111fe9fcf07f31bf401 348 SUPERFAMILY SSF160544 245 343 1.7E-13 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal LT40_RS07740 5b61bf10d8697111fe9fcf07f31bf401 348 PANTHER PTHR30531 6 342 4.9E-69 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS19880 b40b56c48f9f88acf3bde485fc4a8171 324 Gene3D G3DSA:3.90.660.10 183 281 6.1E-58 T 23-04-2016 LT40_RS19880 b40b56c48f9f88acf3bde485fc4a8171 324 Gene3D G3DSA:3.90.660.10 40 106 6.1E-58 T 23-04-2016 LT40_RS19880 b40b56c48f9f88acf3bde485fc4a8171 324 SUPERFAMILY SSF51905 283 323 2.59E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19880 b40b56c48f9f88acf3bde485fc4a8171 324 SUPERFAMILY SSF51905 1 192 2.59E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19880 b40b56c48f9f88acf3bde485fc4a8171 324 Gene3D G3DSA:3.50.50.60 107 182 1.6E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19880 b40b56c48f9f88acf3bde485fc4a8171 324 Gene3D G3DSA:3.50.50.60 283 324 1.6E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19880 b40b56c48f9f88acf3bde485fc4a8171 324 Gene3D G3DSA:3.50.50.60 1 37 1.6E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19880 b40b56c48f9f88acf3bde485fc4a8171 324 Pfam PF01593 Flavin containing amine oxidoreductase 140 320 2.3E-9 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 LT40_RS19880 b40b56c48f9f88acf3bde485fc4a8171 324 Pfam PF13450 NAD(P)-binding Rossmann-like domain 3 56 1.5E-15 T 23-04-2016 LT40_RS19880 b40b56c48f9f88acf3bde485fc4a8171 324 PANTHER PTHR16128 1 324 4.8E-83 T 23-04-2016 LT40_RS15635 508a426eff1e3e648c045bc81c11ab5d 156 Gene3D G3DSA:3.40.1420.10 27 156 1.6E-40 T 23-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 LT40_RS15635 508a426eff1e3e648c045bc81c11ab5d 156 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 38 154 3.1E-39 T 23-04-2016 LT40_RS15635 508a426eff1e3e648c045bc81c11ab5d 156 PIRSF PIRSF009103 1 156 6.0E-54 T 23-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 LT40_RS15635 508a426eff1e3e648c045bc81c11ab5d 156 SUPERFAMILY SSF89872 26 156 3.27E-40 T 23-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 LT40_RS19590 2b8aad898d4d64299fddb6320252a4fc 404 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 1.9E-33 T 23-04-2016 IPR018076 Type II secretion system F domain LT40_RS19590 2b8aad898d4d64299fddb6320252a4fc 404 Pfam PF00482 Type II secretion system (T2SS), protein F 275 396 3.5E-30 T 23-04-2016 IPR018076 Type II secretion system F domain LT40_RS19590 2b8aad898d4d64299fddb6320252a4fc 404 PANTHER PTHR30012:SF0 8 404 3.1E-158 T 23-04-2016 LT40_RS19590 2b8aad898d4d64299fddb6320252a4fc 404 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 23-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 LT40_RS19590 2b8aad898d4d64299fddb6320252a4fc 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.9E-19 T 23-04-2016 IPR003004 GspF/PilC family LT40_RS19590 2b8aad898d4d64299fddb6320252a4fc 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 1.9E-19 T 23-04-2016 IPR003004 GspF/PilC family LT40_RS19590 2b8aad898d4d64299fddb6320252a4fc 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.9E-19 T 23-04-2016 IPR003004 GspF/PilC family LT40_RS19590 2b8aad898d4d64299fddb6320252a4fc 404 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 1.9E-19 T 23-04-2016 IPR003004 GspF/PilC family LT40_RS19590 2b8aad898d4d64299fddb6320252a4fc 404 PANTHER PTHR30012 8 404 3.1E-158 T 23-04-2016 LT40_RS09880 e06f3668bb440f70c259fec7576be715 260 Gene3D G3DSA:3.20.20.150 4 255 5.8E-75 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS09880 e06f3668bb440f70c259fec7576be715 260 SUPERFAMILY SSF51658 5 249 3.51E-58 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS09880 e06f3668bb440f70c259fec7576be715 260 Pfam PF01261 Xylose isomerase-like TIM barrel 30 201 3.5E-7 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS03935 6ef2f98019ec6056a6e8b899158b73ab 130 Gene3D G3DSA:3.30.230.10 5 130 1.2E-51 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LT40_RS03935 6ef2f98019ec6056a6e8b899158b73ab 130 SUPERFAMILY SSF54211 6 130 2.77E-48 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold LT40_RS03935 6ef2f98019ec6056a6e8b899158b73ab 130 PANTHER PTHR21569 1 130 2.5E-72 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 LT40_RS03935 6ef2f98019ec6056a6e8b899158b73ab 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 LT40_RS03935 6ef2f98019ec6056a6e8b899158b73ab 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.443 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid LT40_RS03935 6ef2f98019ec6056a6e8b899158b73ab 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 8.3E-48 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 LT40_RS07400 c708ef22cb14101e834346d10fb00633 416 SUPERFAMILY SSF48208 11 410 1.29E-102 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 LT40_RS07400 c708ef22cb14101e834346d10fb00633 416 Gene3D G3DSA:1.50.10.10 10 402 2.3E-84 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 LT40_RS07400 c708ef22cb14101e834346d10fb00633 416 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 40 393 5.2E-112 T 23-04-2016 LT40_RS07400 c708ef22cb14101e834346d10fb00633 416 PANTHER PTHR15108 41 412 1.8E-44 T 23-04-2016 LT40_RS02445 437becb9af7258fc95fd689db7418a50 447 Pfam PF02120 Flagellar hook-length control protein FliK 316 398 1.4E-17 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal LT40_RS02445 437becb9af7258fc95fd689db7418a50 447 PANTHER PTHR37533:SF2 272 447 2.4E-35 T 23-04-2016 LT40_RS02445 437becb9af7258fc95fd689db7418a50 447 PANTHER PTHR37533 272 447 2.4E-35 T 23-04-2016 LT40_RS17850 d4f897e748fb24ca981abc582861ef9d 250 PANTHER PTHR40279 1 249 6.5E-147 T 23-04-2016 LT40_RS17850 d4f897e748fb24ca981abc582861ef9d 250 SUPERFAMILY SSF48613 1 248 9.89E-80 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LT40_RS17850 d4f897e748fb24ca981abc582861ef9d 250 PANTHER PTHR40279:SF2 1 249 6.5E-147 T 23-04-2016 LT40_RS17850 d4f897e748fb24ca981abc582861ef9d 250 Pfam PF03070 TENA/THI-4/PQQC family 13 222 1.9E-61 T 23-04-2016 IPR004305 Thiaminase-2/PQQC LT40_RS17850 d4f897e748fb24ca981abc582861ef9d 250 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 250 139.684 T 23-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 LT40_RS17850 d4f897e748fb24ca981abc582861ef9d 250 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 6 240 7.9E-126 T 23-04-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420|UniPathway: UPA00539 LT40_RS17850 d4f897e748fb24ca981abc582861ef9d 250 Gene3D G3DSA:1.20.910.10 4 248 5.2E-123 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 1.3E-43 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 453 547 2.1E-12 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 Gene3D G3DSA:3.90.480.10 321 403 3.8E-36 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 Gene3D G3DSA:3.90.480.10 51 117 3.8E-36 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 329 398 1.5E-15 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 53 109 1.2E-14 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 SUPERFAMILY SSF55124 252 276 1.8E-23 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 PANTHER PTHR11493:SF47 327 551 7.0E-167 T 23-04-2016 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 PANTHER PTHR11493:SF47 1 294 7.0E-167 T 23-04-2016 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 PANTHER PTHR11493 327 551 7.0E-167 T 23-04-2016 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 PANTHER PTHR11493 1 294 7.0E-167 T 23-04-2016 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 SUPERFAMILY SSF56014 409 548 3.66E-40 T 23-04-2016 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 Gene3D G3DSA:3.30.413.10 120 273 1.3E-41 T 23-04-2016 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 SUPERFAMILY SSF55124 1 126 5.89E-28 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 SUPERFAMILY SSF55124 315 421 1.8E-23 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 SUPERFAMILY SSF56014 120 284 6.41E-47 T 23-04-2016 LT40_RS09355 2bfe31686d664226f575cd6b5cb36d40 552 Gene3D G3DSA:3.30.413.10 408 548 8.5E-37 T 23-04-2016 LT40_RS02440 f19ad07a14c2356fd1835612bea73622 103 Pfam PF01627 Hpt domain 14 85 2.1E-13 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS02440 f19ad07a14c2356fd1835612bea73622 103 SUPERFAMILY SSF47226 7 98 2.22E-22 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS02440 f19ad07a14c2356fd1835612bea73622 103 Gene3D G3DSA:1.20.120.160 3 96 2.8E-23 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 LT40_RS20035 439405bb72c979503957bdb55bdea7c0 242 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 227 6.3E-35 T 23-04-2016 LT40_RS20035 439405bb72c979503957bdb55bdea7c0 242 PANTHER PTHR37468 1 242 7.0E-81 T 23-04-2016 LT40_RS20035 439405bb72c979503957bdb55bdea7c0 242 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 5 242 25.796 T 23-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 LT40_RS10345 b090f02ec4b8ae0d8107b9ce15d0c3cd 150 Gene3D G3DSA:3.40.50.9100 3 144 5.3E-66 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LT40_RS10345 b090f02ec4b8ae0d8107b9ce15d0c3cd 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 8 25 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LT40_RS10345 b090f02ec4b8ae0d8107b9ce15d0c3cd 150 Pfam PF01220 Dehydroquinase class II 5 140 3.5E-60 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LT40_RS10345 b090f02ec4b8ae0d8107b9ce15d0c3cd 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 70.042 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LT40_RS10345 b090f02ec4b8ae0d8107b9ce15d0c3cd 150 SUPERFAMILY SSF52304 5 146 7.85E-62 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LT40_RS10345 b090f02ec4b8ae0d8107b9ce15d0c3cd 150 PIRSF PIRSF001399 1 147 5.4E-64 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LT40_RS10345 b090f02ec4b8ae0d8107b9ce15d0c3cd 150 PANTHER PTHR21272 1 150 9.5E-90 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LT40_RS10345 b090f02ec4b8ae0d8107b9ce15d0c3cd 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 5 142 3.0E-60 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LT40_RS10345 b090f02ec4b8ae0d8107b9ce15d0c3cd 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 5 137 2.0E-53 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 LT40_RS03970 5a6eb512e5172142b2bb0b0dd9327769 845 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 309 319 - T 23-04-2016 IPR018030 Fimbrial membrane usher, conserved site LT40_RS03970 5a6eb512e5172142b2bb0b0dd9327769 845 SUPERFAMILY SSF141729 68 173 9.02E-24 T 23-04-2016 LT40_RS03970 5a6eb512e5172142b2bb0b0dd9327769 845 PANTHER PTHR30451:SF2 33 827 4.2E-241 T 23-04-2016 LT40_RS03970 5a6eb512e5172142b2bb0b0dd9327769 845 PANTHER PTHR30451 33 827 4.2E-241 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LT40_RS03970 5a6eb512e5172142b2bb0b0dd9327769 845 Pfam PF13954 PapC N-terminal domain 40 181 4.4E-34 T 23-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 LT40_RS03970 5a6eb512e5172142b2bb0b0dd9327769 845 Pfam PF13953 PapC C-terminal domain 747 807 4.8E-15 T 23-04-2016 IPR025949 PapC-like, C-terminal domain LT40_RS03970 5a6eb512e5172142b2bb0b0dd9327769 845 Pfam PF00577 Outer membrane usher protein 198 735 2.1E-160 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LT40_RS19075 b8b8810cc61cffe809a85f3f56ac545a 246 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 22 241 6.0E-128 T 23-04-2016 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 LT40_RS19075 b8b8810cc61cffe809a85f3f56ac545a 246 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 19 246 63.642 T 23-04-2016 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 LT40_RS19075 b8b8810cc61cffe809a85f3f56ac545a 246 Gene3D G3DSA:3.40.50.850 16 240 1.2E-60 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS19075 b8b8810cc61cffe809a85f3f56ac545a 246 Pfam PF00857 Isochorismatase family 36 234 2.0E-38 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS19075 b8b8810cc61cffe809a85f3f56ac545a 246 SUPERFAMILY SSF52499 19 237 1.31E-52 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LT40_RS19075 b8b8810cc61cffe809a85f3f56ac545a 246 PANTHER PTHR11080:SF19 11 239 8.9E-74 T 23-04-2016 LT40_RS19075 b8b8810cc61cffe809a85f3f56ac545a 246 PANTHER PTHR11080 11 239 8.9E-74 T 23-04-2016 LT40_RS19715 3ba974b3531e90671d5cc2a7c86a93d1 262 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 193 209 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LT40_RS19715 3ba974b3531e90671d5cc2a7c86a93d1 262 Pfam PF01026 TatD related DNase 4 256 1.6E-64 T 23-04-2016 IPR001130 TatD family GO:0016788 LT40_RS19715 3ba974b3531e90671d5cc2a7c86a93d1 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LT40_RS19715 3ba974b3531e90671d5cc2a7c86a93d1 262 PIRSF PIRSF005902 1 261 2.2E-69 T 23-04-2016 IPR001130 TatD family GO:0016788 LT40_RS19715 3ba974b3531e90671d5cc2a7c86a93d1 262 Gene3D G3DSA:3.20.20.140 2 258 1.7E-79 T 23-04-2016 LT40_RS19715 3ba974b3531e90671d5cc2a7c86a93d1 262 SUPERFAMILY SSF51556 3 258 6.81E-79 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS19715 3ba974b3531e90671d5cc2a7c86a93d1 262 PANTHER PTHR10060 1 260 2.1E-89 T 23-04-2016 IPR001130 TatD family GO:0016788 LT40_RS19715 3ba974b3531e90671d5cc2a7c86a93d1 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 257 4.3E-62 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 LT40_RS19455 d4e7bf8f9e44393eb594052417c68355 173 TIGRFAM TIGR00077 lspA: signal peptidase II 14 167 2.1E-41 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LT40_RS19455 d4e7bf8f9e44393eb594052417c68355 173 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 11 168 17.502 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LT40_RS19455 d4e7bf8f9e44393eb594052417c68355 173 PANTHER PTHR33695 10 167 1.6E-61 T 23-04-2016 LT40_RS19455 d4e7bf8f9e44393eb594052417c68355 173 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LT40_RS19455 d4e7bf8f9e44393eb594052417c68355 173 PANTHER PTHR33695:SF1 10 167 1.6E-61 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LT40_RS19455 d4e7bf8f9e44393eb594052417c68355 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 9.0E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LT40_RS19455 d4e7bf8f9e44393eb594052417c68355 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 9.0E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LT40_RS19455 d4e7bf8f9e44393eb594052417c68355 173 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 143 159 9.0E-19 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LT40_RS19455 d4e7bf8f9e44393eb594052417c68355 173 Pfam PF01252 Signal peptidase (SPase) II 20 162 1.6E-37 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 LT40_RS19505 e65063f73903d2453bf46bf443f7301a 366 PANTHER PTHR13847:SF180 5 361 3.0E-98 T 23-04-2016 LT40_RS19505 e65063f73903d2453bf46bf443f7301a 366 SUPERFAMILY SSF51905 306 361 5.61E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19505 e65063f73903d2453bf46bf443f7301a 366 SUPERFAMILY SSF51905 4 219 5.61E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19505 e65063f73903d2453bf46bf443f7301a 366 PANTHER PTHR13847 5 361 3.0E-98 T 23-04-2016 LT40_RS19505 e65063f73903d2453bf46bf443f7301a 366 SUPERFAMILY SSF54373 219 306 5.49E-22 T 23-04-2016 LT40_RS19505 e65063f73903d2453bf46bf443f7301a 366 Gene3D G3DSA:3.50.50.60 306 361 2.6E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19505 e65063f73903d2453bf46bf443f7301a 366 Gene3D G3DSA:3.50.50.60 4 82 2.6E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19505 e65063f73903d2453bf46bf443f7301a 366 Gene3D G3DSA:3.50.50.60 136 205 2.6E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19505 e65063f73903d2453bf46bf443f7301a 366 Gene3D G3DSA:3.30.9.10 206 304 1.9E-17 T 23-04-2016 LT40_RS19505 e65063f73903d2453bf46bf443f7301a 366 Pfam PF01266 FAD dependent oxidoreductase 4 345 4.5E-67 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS19505 e65063f73903d2453bf46bf443f7301a 366 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 5 349 7.4E-84 T 23-04-2016 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 UniPathway: UPA00060 LT40_RS08515 18be43cc9d7e26f5a305e531d83637d1 389 PANTHER PTHR18919 1 389 3.0E-116 T 23-04-2016 LT40_RS08515 18be43cc9d7e26f5a305e531d83637d1 389 Pfam PF00108 Thiolase, N-terminal domain 11 183 4.0E-17 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LT40_RS08515 18be43cc9d7e26f5a305e531d83637d1 389 Gene3D G3DSA:3.40.47.10 146 183 5.0E-21 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS08515 18be43cc9d7e26f5a305e531d83637d1 389 Gene3D G3DSA:3.40.47.10 246 381 5.0E-21 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS08515 18be43cc9d7e26f5a305e531d83637d1 389 PANTHER PTHR18919:SF8 1 389 3.0E-116 T 23-04-2016 LT40_RS08515 18be43cc9d7e26f5a305e531d83637d1 389 PIRSF PIRSF000429 1 387 3.2E-61 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 LT40_RS08515 18be43cc9d7e26f5a305e531d83637d1 389 Gene3D G3DSA:3.40.47.10 14 122 3.6E-26 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS08515 18be43cc9d7e26f5a305e531d83637d1 389 Gene3D G3DSA:3.40.47.10 208 230 3.6E-26 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS08515 18be43cc9d7e26f5a305e531d83637d1 389 SUPERFAMILY SSF53901 20 120 1.17E-42 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS08515 18be43cc9d7e26f5a305e531d83637d1 389 SUPERFAMILY SSF53901 190 361 1.17E-42 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS08515 18be43cc9d7e26f5a305e531d83637d1 389 Pfam PF02803 Thiolase, C-terminal domain 246 365 1.3E-9 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LT40_RS09755 1fa178616b085cc20dd47bb4948062b5 317 SUPERFAMILY SSF56349 130 315 8.83E-37 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LT40_RS09755 1fa178616b085cc20dd47bb4948062b5 317 Gene3D G3DSA:1.10.443.10 135 312 4.9E-32 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS09755 1fa178616b085cc20dd47bb4948062b5 317 PANTHER PTHR30349:SF5 34 316 1.8E-29 T 23-04-2016 LT40_RS09755 1fa178616b085cc20dd47bb4948062b5 317 Pfam PF00589 Phage integrase family 132 301 1.3E-22 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS09755 1fa178616b085cc20dd47bb4948062b5 317 PANTHER PTHR30349 34 316 1.8E-29 T 23-04-2016 LT40_RS02320 27fb8104d4df59399914cfbeb385ff5e 245 SUPERFAMILY SSF117143 77 179 3.27E-13 T 23-04-2016 LT40_RS02320 27fb8104d4df59399914cfbeb385ff5e 245 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 239 3.1E-19 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LT40_RS02320 27fb8104d4df59399914cfbeb385ff5e 245 PANTHER PTHR30435:SF18 1 245 2.7E-91 T 23-04-2016 LT40_RS02320 27fb8104d4df59399914cfbeb385ff5e 245 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-8 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LT40_RS02320 27fb8104d4df59399914cfbeb385ff5e 245 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 3.8E-31 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G LT40_RS02320 27fb8104d4df59399914cfbeb385ff5e 245 PANTHER PTHR30435 1 245 2.7E-91 T 23-04-2016 LT40_RS01655 b61698f25ac8e84c97fb7145d8b25dba 324 SUPERFAMILY SSF51735 111 262 2.63E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS01655 b61698f25ac8e84c97fb7145d8b25dba 324 PANTHER PTHR11695:SF605 16 324 2.1E-100 T 23-04-2016 LT40_RS01655 b61698f25ac8e84c97fb7145d8b25dba 324 Gene3D G3DSA:3.90.180.10 5 147 2.4E-33 T 23-04-2016 IPR011032 GroES-like LT40_RS01655 b61698f25ac8e84c97fb7145d8b25dba 324 Pfam PF00107 Zinc-binding dehydrogenase 151 253 8.1E-22 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LT40_RS01655 b61698f25ac8e84c97fb7145d8b25dba 324 SMART SM00829 11 322 1.0E-13 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LT40_RS01655 b61698f25ac8e84c97fb7145d8b25dba 324 Gene3D G3DSA:3.40.50.720 148 255 5.6E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS01655 b61698f25ac8e84c97fb7145d8b25dba 324 SUPERFAMILY SSF50129 5 144 1.26E-31 T 23-04-2016 IPR011032 GroES-like LT40_RS01655 b61698f25ac8e84c97fb7145d8b25dba 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 4.0E-8 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LT40_RS01655 b61698f25ac8e84c97fb7145d8b25dba 324 PANTHER PTHR11695 16 324 2.1E-100 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS03665 9e405d79cfd1fd651367f16c378ff24b 313 PANTHER PTHR31752 27 38 5.2E-51 T 23-04-2016 LT40_RS03665 9e405d79cfd1fd651367f16c378ff24b 313 PANTHER PTHR31752 89 309 5.2E-51 T 23-04-2016 LT40_RS03665 9e405d79cfd1fd651367f16c378ff24b 313 Pfam PF03547 Membrane transport protein 165 301 3.3E-9 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 LT40_RS03665 9e405d79cfd1fd651367f16c378ff24b 313 Pfam PF03547 Membrane transport protein 13 142 4.0E-15 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 LT40_RS03665 9e405d79cfd1fd651367f16c378ff24b 313 PANTHER PTHR31752:SF13 27 38 5.2E-51 T 23-04-2016 LT40_RS03665 9e405d79cfd1fd651367f16c378ff24b 313 PANTHER PTHR31752:SF13 89 309 5.2E-51 T 23-04-2016 LT40_RS08330 cf5ff55d7b51ebaf20ed62bd9ab730db 408 PANTHER PTHR11999 25 354 2.2E-100 T 23-04-2016 LT40_RS08330 cf5ff55d7b51ebaf20ed62bd9ab730db 408 Gene3D G3DSA:3.40.640.10 38 281 9.1E-43 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS08330 cf5ff55d7b51ebaf20ed62bd9ab730db 408 Hamap MF_00609 Histidine decarboxylase [hdc]. 2 374 67.935 T 23-04-2016 IPR023523 Histidine decarboxylase, bacteria GO:0004398|GO:0030170 KEGG: 00340+4.1.1.22|MetaCyc: PWY-6173 LT40_RS08330 cf5ff55d7b51ebaf20ed62bd9ab730db 408 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 112 312 3.4E-21 T 23-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 LT40_RS08330 cf5ff55d7b51ebaf20ed62bd9ab730db 408 PANTHER PTHR11999:SF110 25 354 2.2E-100 T 23-04-2016 LT40_RS08330 cf5ff55d7b51ebaf20ed62bd9ab730db 408 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 226 247 - T 23-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 LT40_RS08330 cf5ff55d7b51ebaf20ed62bd9ab730db 408 SUPERFAMILY SSF53383 21 369 2.66E-75 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS05305 5463360dfc705f8a531b9ffec0fd38cf 314 SUPERFAMILY SSF51395 2 311 1.79E-69 T 23-04-2016 LT40_RS05305 5463360dfc705f8a531b9ffec0fd38cf 314 PIRSF PIRSF006621 1 313 9.1E-76 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS05305 5463360dfc705f8a531b9ffec0fd38cf 314 PANTHER PTHR11082:SF26 5 312 3.2E-142 T 23-04-2016 LT40_RS05305 5463360dfc705f8a531b9ffec0fd38cf 314 PANTHER PTHR11082 5 312 3.2E-142 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS05305 5463360dfc705f8a531b9ffec0fd38cf 314 Pfam PF01207 Dihydrouridine synthase (Dus) 5 262 3.6E-63 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS05305 5463360dfc705f8a531b9ffec0fd38cf 314 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 LT40_RS05305 5463360dfc705f8a531b9ffec0fd38cf 314 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 314 50.517 T 23-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 LT40_RS05305 5463360dfc705f8a531b9ffec0fd38cf 314 Gene3D G3DSA:3.20.20.70 2 242 8.1E-63 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS09560 dc3eb2c1dfb7585062c6bae0e7028535 156 Gene3D G3DSA:2.60.40.10 41 103 1.9E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold LT40_RS09560 dc3eb2c1dfb7585062c6bae0e7028535 156 SMART SM00769 31 151 2.0E-39 T 23-04-2016 IPR013990 Water stress and hypersensitive response domain GO:0009269 LT40_RS09560 dc3eb2c1dfb7585062c6bae0e7028535 156 SUPERFAMILY SSF117070 9 152 5.75E-28 T 23-04-2016 LT40_RS09560 dc3eb2c1dfb7585062c6bae0e7028535 156 Pfam PF03168 Late embryogenesis abundant protein 51 142 3.5E-18 T 23-04-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 LT40_RS07575 1928117cc5b0178fc1520d87734258c8 276 PANTHER PTHR30622:SF4 1 276 1.8E-120 T 23-04-2016 LT40_RS07575 1928117cc5b0178fc1520d87734258c8 276 Pfam PF02673 Bacitracin resistance protein BacA 7 262 1.5E-73 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LT40_RS07575 1928117cc5b0178fc1520d87734258c8 276 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 261 8.7E-81 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LT40_RS07575 1928117cc5b0178fc1520d87734258c8 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 268 17.341 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LT40_RS07575 1928117cc5b0178fc1520d87734258c8 276 PANTHER PTHR30622 1 276 1.8E-120 T 23-04-2016 LT40_RS04990 b3f7f909d2d2a56a826f30f43ff49d4e 278 Pfam PF13525 Outer membrane lipoprotein 158 241 4.3E-9 T 23-04-2016 LT40_RS04990 b3f7f909d2d2a56a826f30f43ff49d4e 278 PANTHER PTHR26312:SF74 48 65 6.5E-49 T 23-04-2016 LT40_RS04990 b3f7f909d2d2a56a826f30f43ff49d4e 278 PANTHER PTHR26312:SF74 169 276 6.5E-49 T 23-04-2016 LT40_RS04990 b3f7f909d2d2a56a826f30f43ff49d4e 278 Gene3D G3DSA:1.25.40.10 160 269 1.6E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS04990 b3f7f909d2d2a56a826f30f43ff49d4e 278 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 158 275 2.0E-40 T 23-04-2016 IPR014162 Tol-Pal system, YbgF LT40_RS04990 b3f7f909d2d2a56a826f30f43ff49d4e 278 SUPERFAMILY SSF48452 155 272 2.0E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS04990 b3f7f909d2d2a56a826f30f43ff49d4e 278 Pfam PF16331 TolA binding protein trimerisation 65 119 2.2E-12 T 23-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 LT40_RS04990 b3f7f909d2d2a56a826f30f43ff49d4e 278 PANTHER PTHR26312 48 65 6.5E-49 T 23-04-2016 LT40_RS04990 b3f7f909d2d2a56a826f30f43ff49d4e 278 PANTHER PTHR26312 169 276 6.5E-49 T 23-04-2016 LT40_RS01230 621a1a9adb02b7d0b7b0ec85857e2efc 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.4E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01230 621a1a9adb02b7d0b7b0ec85857e2efc 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.4E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01230 621a1a9adb02b7d0b7b0ec85857e2efc 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.4E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS01230 621a1a9adb02b7d0b7b0ec85857e2efc 303 Pfam PF03466 LysR substrate binding domain 89 293 4.4E-40 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS01230 621a1a9adb02b7d0b7b0ec85857e2efc 303 PANTHER PTHR30346 1 299 9.4E-83 T 23-04-2016 LT40_RS01230 621a1a9adb02b7d0b7b0ec85857e2efc 303 SUPERFAMILY SSF46785 3 87 5.81E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01230 621a1a9adb02b7d0b7b0ec85857e2efc 303 SUPERFAMILY SSF53850 91 296 5.79E-39 T 23-04-2016 LT40_RS01230 621a1a9adb02b7d0b7b0ec85857e2efc 303 Gene3D G3DSA:1.10.10.10 1 87 6.5E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01230 621a1a9adb02b7d0b7b0ec85857e2efc 303 Gene3D G3DSA:3.40.190.10 176 261 3.9E-24 T 23-04-2016 LT40_RS01230 621a1a9adb02b7d0b7b0ec85857e2efc 303 Gene3D G3DSA:3.40.190.10 89 175 1.2E-30 T 23-04-2016 LT40_RS01230 621a1a9adb02b7d0b7b0ec85857e2efc 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.4E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS18265 c6c41e59be1e0fa4b5604379ab9796d9 329 SUPERFAMILY SSF50037 267 313 2.33E-6 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal LT40_RS18265 c6c41e59be1e0fa4b5604379ab9796d9 329 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 3 313 32.19 T 23-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 LT40_RS18265 c6c41e59be1e0fa4b5604379ab9796d9 329 PANTHER PTHR12835 13 322 2.1E-73 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 LT40_RS18265 c6c41e59be1e0fa4b5604379ab9796d9 329 Pfam PF08279 HTH domain 7 54 1.0E-10 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 LT40_RS18265 c6c41e59be1e0fa4b5604379ab9796d9 329 Gene3D G3DSA:2.30.30.100 267 315 4.2E-12 T 23-04-2016 LT40_RS18265 c6c41e59be1e0fa4b5604379ab9796d9 329 SUPERFAMILY SSF46785 4 55 9.54E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18265 c6c41e59be1e0fa4b5604379ab9796d9 329 Gene3D G3DSA:1.10.10.10 4 58 6.2E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18265 c6c41e59be1e0fa4b5604379ab9796d9 329 SUPERFAMILY SSF55681 69 265 7.81E-57 T 23-04-2016 LT40_RS18265 c6c41e59be1e0fa4b5604379ab9796d9 329 Gene3D G3DSA:3.30.930.10 69 264 2.7E-60 T 23-04-2016 LT40_RS18265 c6c41e59be1e0fa4b5604379ab9796d9 329 Pfam PF03099 Biotin/lipoate A/B protein ligase family 95 205 1.5E-18 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LT40_RS18265 c6c41e59be1e0fa4b5604379ab9796d9 329 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 76 313 1.6E-57 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 LT40_RS17195 86a79fc302abf704bc6740305b10cd2b 134 PANTHER PTHR11079 6 49 2.9E-22 T 23-04-2016 LT40_RS17195 86a79fc302abf704bc6740305b10cd2b 134 Gene3D G3DSA:3.10.290.10 11 107 3.2E-34 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS17195 86a79fc302abf704bc6740305b10cd2b 134 SUPERFAMILY SSF55174 12 107 6.41E-27 T 23-04-2016 LT40_RS17195 86a79fc302abf704bc6740305b10cd2b 134 Pfam PF01479 S4 domain 13 59 5.5E-10 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS17195 86a79fc302abf704bc6740305b10cd2b 134 PIRSF PIRSF016821 10 134 8.9E-39 T 23-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 LT40_RS17195 86a79fc302abf704bc6740305b10cd2b 134 SMART SM00363 13 76 8.4E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 LT40_RS17195 86a79fc302abf704bc6740305b10cd2b 134 PANTHER PTHR11079:SF70 6 49 2.9E-22 T 23-04-2016 LT40_RS11280 fa931f3bc3e41aa5b45251643dad2ec5 226 PANTHER PTHR30098 1 220 4.3E-81 T 23-04-2016 LT40_RS11280 fa931f3bc3e41aa5b45251643dad2ec5 226 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 226 101.541 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 LT40_RS11280 fa931f3bc3e41aa5b45251643dad2ec5 226 PANTHER PTHR30098:SF2 1 220 4.3E-81 T 23-04-2016 LT40_RS11280 fa931f3bc3e41aa5b45251643dad2ec5 226 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 216 1.2E-65 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 LT40_RS11280 fa931f3bc3e41aa5b45251643dad2ec5 226 SUPERFAMILY SSF55729 2 222 1.27E-94 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS11280 fa931f3bc3e41aa5b45251643dad2ec5 226 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 34 203 1.0E-76 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 LT40_RS02000 21449c28d113a9f1c7704314a0a466e6 380 Gene3D G3DSA:3.50.50.60 2 83 5.7E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS02000 21449c28d113a9f1c7704314a0a466e6 380 Gene3D G3DSA:3.50.50.60 141 219 5.7E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS02000 21449c28d113a9f1c7704314a0a466e6 380 Gene3D G3DSA:3.50.50.60 311 369 5.7E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS02000 21449c28d113a9f1c7704314a0a466e6 380 SUPERFAMILY SSF54373 228 308 1.7E-5 T 23-04-2016 LT40_RS02000 21449c28d113a9f1c7704314a0a466e6 380 PANTHER PTHR13847 5 368 6.0E-58 T 23-04-2016 LT40_RS02000 21449c28d113a9f1c7704314a0a466e6 380 Gene3D G3DSA:3.30.9.10 88 140 1.1E-7 T 23-04-2016 LT40_RS02000 21449c28d113a9f1c7704314a0a466e6 380 Gene3D G3DSA:3.30.9.10 220 307 1.1E-7 T 23-04-2016 LT40_RS02000 21449c28d113a9f1c7704314a0a466e6 380 SUPERFAMILY SSF51905 7 220 8.63E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS02000 21449c28d113a9f1c7704314a0a466e6 380 SUPERFAMILY SSF51905 311 374 8.63E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS02000 21449c28d113a9f1c7704314a0a466e6 380 Pfam PF01266 FAD dependent oxidoreductase 8 350 6.2E-57 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS20050 05d952e5091e74cde94238df8c8964aa 113 Gene3D G3DSA:3.20.160.10 8 111 2.8E-42 T 23-04-2016 LT40_RS20050 05d952e5091e74cde94238df8c8964aa 113 Pfam PF08888 HopJ type III effector protein 8 109 2.6E-36 T 23-04-2016 IPR014984 HopJ type III effector protein LT40_RS07745 220c217a57788b9e8e6c5832c20b7778 272 PANTHER PTHR30065 9 266 5.0E-58 T 23-04-2016 LT40_RS07745 220c217a57788b9e8e6c5832c20b7778 272 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 16 261 2.5E-64 T 23-04-2016 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 LT40_RS07745 220c217a57788b9e8e6c5832c20b7778 272 PANTHER PTHR30065:SF2 9 266 5.0E-58 T 23-04-2016 LT40_RS07745 220c217a57788b9e8e6c5832c20b7778 272 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 189 211 7.5E-25 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LT40_RS07745 220c217a57788b9e8e6c5832c20b7778 272 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 87 106 7.5E-25 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LT40_RS07745 220c217a57788b9e8e6c5832c20b7778 272 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 211 230 7.5E-25 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LT40_RS07745 220c217a57788b9e8e6c5832c20b7778 272 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 26 47 7.5E-25 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LT40_RS07745 220c217a57788b9e8e6c5832c20b7778 272 Pfam PF01311 Bacterial export proteins, family 1 18 253 6.8E-52 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LT40_RS06670 c86f573262e6d7abdffc12f6c0d50187 181 PANTHER PTHR21666 33 172 3.9E-37 T 23-04-2016 LT40_RS06670 c86f573262e6d7abdffc12f6c0d50187 181 SUPERFAMILY SSF54001 48 173 2.35E-39 T 23-04-2016 LT40_RS06670 c86f573262e6d7abdffc12f6c0d50187 181 Pfam PF00877 NlpC/P60 family 61 169 9.7E-30 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS06670 c86f573262e6d7abdffc12f6c0d50187 181 Gene3D G3DSA:3.90.1720.10 47 173 4.7E-43 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 36.606 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.8E-51 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.8E-51 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.8E-51 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.8E-51 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.8E-51 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 Pfam PF01467 Cytidylyltransferase-like 5 133 1.0E-23 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 PANTHER PTHR21342:SF1 1 157 1.1E-81 T 23-04-2016 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 80 6.0E-4 T 23-04-2016 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 SUPERFAMILY SSF52374 1 153 4.02E-45 T 23-04-2016 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 PANTHER PTHR21342 1 157 1.1E-81 T 23-04-2016 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 Gene3D G3DSA:3.40.50.620 1 157 3.7E-55 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 63 3.0E-19 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LT40_RS14710 6308c8a072c8e23d6f1a03f78fb71a66 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 154 2.3E-59 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 LT40_RS13335 b16f7b51a2d69da685f174e9dbd82ece 297 Pfam PF01163 RIO1 family 31 222 4.1E-46 T 23-04-2016 LT40_RS13335 b16f7b51a2d69da685f174e9dbd82ece 297 Gene3D G3DSA:3.30.200.20 17 124 5.6E-14 T 23-04-2016 LT40_RS13335 b16f7b51a2d69da685f174e9dbd82ece 297 SUPERFAMILY SSF56112 18 223 1.9E-20 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS13335 b16f7b51a2d69da685f174e9dbd82ece 297 PANTHER PTHR10593:SF19 6 266 7.2E-134 T 23-04-2016 LT40_RS13335 b16f7b51a2d69da685f174e9dbd82ece 297 Gene3D G3DSA:1.10.510.10 139 225 2.7E-19 T 23-04-2016 LT40_RS13335 b16f7b51a2d69da685f174e9dbd82ece 297 SMART SM00090 2 234 1.8E-17 T 23-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LT40_RS13335 b16f7b51a2d69da685f174e9dbd82ece 297 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 23-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 LT40_RS13335 b16f7b51a2d69da685f174e9dbd82ece 297 PANTHER PTHR10593 6 266 7.2E-134 T 23-04-2016 LT40_RS20565 0896be72afec79788885df8a5167f87f 260 Pfam PF04445 Putative SAM-dependent methyltransferase 27 253 1.2E-93 T 23-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 LT40_RS20565 0896be72afec79788885df8a5167f87f 260 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 9 255 39.169 T 23-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 LT40_RS20565 0896be72afec79788885df8a5167f87f 260 PANTHER PTHR36112:SF1 37 260 1.0E-119 T 23-04-2016 LT40_RS20565 0896be72afec79788885df8a5167f87f 260 Gene3D G3DSA:3.40.50.150 64 256 7.0E-77 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS20565 0896be72afec79788885df8a5167f87f 260 SUPERFAMILY SSF53335 13 255 5.8E-73 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS20565 0896be72afec79788885df8a5167f87f 260 PANTHER PTHR36112 37 260 1.0E-119 T 23-04-2016 LT40_RS09230 a5f8523676d71c99776f756812502233 211 PANTHER PTHR23416 43 177 4.1E-43 T 23-04-2016 LT40_RS09230 a5f8523676d71c99776f756812502233 211 PANTHER PTHR23416:SF59 43 177 4.1E-43 T 23-04-2016 LT40_RS09230 a5f8523676d71c99776f756812502233 211 Gene3D G3DSA:2.160.10.10 51 203 1.0E-44 T 23-04-2016 LT40_RS09230 a5f8523676d71c99776f756812502233 211 SUPERFAMILY SSF51161 48 201 9.56E-41 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS09230 a5f8523676d71c99776f756812502233 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 141 3.7E-7 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 PANTHER PTHR30293 1 302 3.9E-68 T 23-04-2016 LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 SUPERFAMILY SSF46785 1 110 5.38E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.7E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 PANTHER PTHR30293:SF1 1 302 3.9E-68 T 23-04-2016 LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 Gene3D G3DSA:1.10.10.10 1 83 3.5E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 Gene3D G3DSA:3.40.190.10 177 266 2.4E-16 T 23-04-2016 LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 SUPERFAMILY SSF53850 90 298 1.9E-40 T 23-04-2016 LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 Pfam PF03466 LysR substrate binding domain 89 291 4.4E-38 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS11565 7fb27794fd688c42ecf2e6d6a2ac325c 307 Gene3D G3DSA:3.40.190.10 90 176 3.5E-10 T 23-04-2016 LT40_RS15265 05009242b9a0f0a97641838134113ae9 217 Gene3D G3DSA:1.20.1440.100 15 80 5.4E-32 T 23-04-2016 LT40_RS15265 05009242b9a0f0a97641838134113ae9 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 1.5E-44 T 23-04-2016 LT40_RS15265 05009242b9a0f0a97641838134113ae9 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 202 3.4E-49 T 23-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial LT40_RS15265 05009242b9a0f0a97641838134113ae9 217 PANTHER PTHR10000 1 217 4.1E-72 T 23-04-2016 LT40_RS15265 05009242b9a0f0a97641838134113ae9 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 189 1.8E-30 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 LT40_RS15265 05009242b9a0f0a97641838134113ae9 217 SUPERFAMILY SSF56784 1 211 1.87E-39 T 23-04-2016 IPR023214 HAD-like domain LT40_RS15265 05009242b9a0f0a97641838134113ae9 217 Gene3D G3DSA:3.40.50.1000 81 216 1.4E-54 T 23-04-2016 IPR023214 HAD-like domain LT40_RS15265 05009242b9a0f0a97641838134113ae9 217 PANTHER PTHR10000:SF10 1 217 4.1E-72 T 23-04-2016 LT40_RS08535 8ab2bb2c904eecfc251c28217c5bbc29 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.3E-24 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS08535 8ab2bb2c904eecfc251c28217c5bbc29 300 SUPERFAMILY SSF53850 89 293 2.64E-40 T 23-04-2016 LT40_RS08535 8ab2bb2c904eecfc251c28217c5bbc29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.5E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS08535 8ab2bb2c904eecfc251c28217c5bbc29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.5E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS08535 8ab2bb2c904eecfc251c28217c5bbc29 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.5E-11 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS08535 8ab2bb2c904eecfc251c28217c5bbc29 300 Gene3D G3DSA:3.40.190.10 89 175 1.8E-22 T 23-04-2016 LT40_RS08535 8ab2bb2c904eecfc251c28217c5bbc29 300 SUPERFAMILY SSF46785 3 83 2.12E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08535 8ab2bb2c904eecfc251c28217c5bbc29 300 Gene3D G3DSA:3.40.190.10 176 265 3.6E-29 T 23-04-2016 LT40_RS08535 8ab2bb2c904eecfc251c28217c5bbc29 300 Pfam PF03466 LysR substrate binding domain 88 290 2.8E-41 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS08535 8ab2bb2c904eecfc251c28217c5bbc29 300 PANTHER PTHR30346 1 295 1.1E-86 T 23-04-2016 LT40_RS08535 8ab2bb2c904eecfc251c28217c5bbc29 300 Gene3D G3DSA:1.10.10.10 1 81 1.8E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 139 150 - T 23-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 Gene3D G3DSA:1.20.1440.90 278 391 9.6E-30 T 23-04-2016 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 PANTHER PTHR30523 1 881 0.0 T 23-04-2016 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 138 151 3.7E-68 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 710 736 3.7E-68 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 537 557 3.7E-68 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 388 408 3.7E-68 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 191 207 3.7E-68 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 250 265 3.7E-68 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 579 608 3.7E-68 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 881 18.399 T 23-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 PANTHER PTHR30523:SF3 1 881 0.0 T 23-04-2016 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 539 551 - T 23-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 SUPERFAMILY SSF51621 9 881 1.07E-298 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS20530 a32ad5269b66aeae898745d79a31f3dd 881 Pfam PF00311 Phosphoenolpyruvate carboxylase 134 881 5.7E-274 T 23-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LT40_RS13285 4f8cdb05977efe98129b4a32c06dc93c 329 SUPERFAMILY SSF81345 8 327 1.14E-73 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS13285 4f8cdb05977efe98129b4a32c06dc93c 329 PANTHER PTHR30472 1 329 1.6E-95 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LT40_RS13285 4f8cdb05977efe98129b4a32c06dc93c 329 Gene3D G3DSA:1.10.3470.10 3 329 5.7E-91 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS13285 4f8cdb05977efe98129b4a32c06dc93c 329 Pfam PF01032 FecCD transport family 18 327 3.3E-85 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 LT40_RS05645 3fe248624d5c45603c974a0d74dd70b3 223 Gene3D G3DSA:1.10.340.30 40 135 1.6E-26 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS05645 3fe248624d5c45603c974a0d74dd70b3 223 PANTHER PTHR30037:SF3 174 206 1.2E-104 T 23-04-2016 LT40_RS05645 3fe248624d5c45603c974a0d74dd70b3 223 PANTHER PTHR30037:SF3 1 156 1.2E-104 T 23-04-2016 LT40_RS05645 3fe248624d5c45603c974a0d74dd70b3 223 SUPERFAMILY SSF48150 38 182 6.59E-37 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS05645 3fe248624d5c45603c974a0d74dd70b3 223 PANTHER PTHR30037 174 206 1.2E-104 T 23-04-2016 LT40_RS05645 3fe248624d5c45603c974a0d74dd70b3 223 PANTHER PTHR30037 1 156 1.2E-104 T 23-04-2016 LT40_RS05645 3fe248624d5c45603c974a0d74dd70b3 223 Pfam PF03352 Methyladenine glycosylase 43 131 6.1E-18 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 LT40_RS15065 b678fa731db4062511bd06d34cfac34d 279 PANTHER PTHR40841 38 261 4.6E-39 T 23-04-2016 LT40_RS15065 b678fa731db4062511bd06d34cfac34d 279 SUPERFAMILY SSF53474 22 262 3.6E-51 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS15065 b678fa731db4062511bd06d34cfac34d 279 Gene3D G3DSA:3.40.50.1820 30 269 2.3E-64 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS15065 b678fa731db4062511bd06d34cfac34d 279 PANTHER PTHR40841:SF2 38 261 4.6E-39 T 23-04-2016 LT40_RS15065 b678fa731db4062511bd06d34cfac34d 279 Pfam PF00756 Putative esterase 40 214 5.5E-25 T 23-04-2016 IPR000801 Putative esterase LT40_RS03095 e1c7613089d6f842cb192dad13264576 91 Pfam PF01541 GIY-YIG catalytic domain 10 80 1.0E-12 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily LT40_RS03095 e1c7613089d6f842cb192dad13264576 91 SMART SM00465 8 88 3.0E-4 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily LT40_RS03095 e1c7613089d6f842cb192dad13264576 91 SUPERFAMILY SSF82771 9 80 1.57E-12 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily LT40_RS03095 e1c7613089d6f842cb192dad13264576 91 PANTHER PTHR34477:SF1 3 85 2.8E-31 T 23-04-2016 LT40_RS03095 e1c7613089d6f842cb192dad13264576 91 PANTHER PTHR34477 3 85 2.8E-31 T 23-04-2016 LT40_RS03680 d741d210a38a69c9fa23ef1d7e13856f 120 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 28 119 5.3E-42 T 23-04-2016 IPR012997 Rare lipoprotein A LT40_RS03680 d741d210a38a69c9fa23ef1d7e13856f 120 Gene3D G3DSA:2.40.40.10 62 115 6.4E-5 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LT40_RS03680 d741d210a38a69c9fa23ef1d7e13856f 120 Pfam PF03330 Lytic transglycolase 27 115 5.4E-23 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LT40_RS03680 d741d210a38a69c9fa23ef1d7e13856f 120 PANTHER PTHR34183 22 119 1.4E-47 T 23-04-2016 LT40_RS03680 d741d210a38a69c9fa23ef1d7e13856f 120 SUPERFAMILY SSF50685 28 115 2.51E-11 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LT40_RS03680 d741d210a38a69c9fa23ef1d7e13856f 120 PANTHER PTHR34183:SF2 22 119 1.4E-47 T 23-04-2016 LT40_RS04785 a7e6f3a5a9b056c008814301661202b1 712 SUPERFAMILY SSF82861 451 535 1.7E-14 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LT40_RS04785 a7e6f3a5a9b056c008814301661202b1 712 SUPERFAMILY SSF82689 601 702 1.44E-13 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 LT40_RS04785 a7e6f3a5a9b056c008814301661202b1 712 Gene3D G3DSA:3.30.70.100 608 691 7.1E-4 T 23-04-2016 LT40_RS04785 a7e6f3a5a9b056c008814301661202b1 712 Gene3D G3DSA:2.30.30.60 555 599 1.4E-11 T 23-04-2016 LT40_RS04785 a7e6f3a5a9b056c008814301661202b1 712 Pfam PF00924 Mechanosensitive ion channel 494 693 1.2E-39 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LT40_RS04785 a7e6f3a5a9b056c008814301661202b1 712 PANTHER PTHR30460:SF0 43 707 1.2E-168 T 23-04-2016 LT40_RS04785 a7e6f3a5a9b056c008814301661202b1 712 SUPERFAMILY SSF50182 537 600 3.92E-12 T 23-04-2016 IPR010920 LSM domain LT40_RS04785 a7e6f3a5a9b056c008814301661202b1 712 PANTHER PTHR30460 43 707 1.2E-168 T 23-04-2016 LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 Gene3D G3DSA:1.10.540.10 12 118 1.6E-28 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 SUPERFAMILY SSF47203 231 395 4.51E-24 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 Gene3D G3DSA:1.20.140.10 219 397 2.3E-55 T 23-04-2016 LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 244 376 7.5E-21 T 23-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 PANTHER PTHR10909 12 394 4.1E-174 T 23-04-2016 LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 PIRSF PIRSF016578 7 396 3.5E-34 T 23-04-2016 LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 Gene3D G3DSA:2.40.110.10 142 218 6.0E-21 T 23-04-2016 LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 PANTHER PTHR10909:SF300 12 394 4.1E-174 T 23-04-2016 LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 25 123 1.9E-8 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 SUPERFAMILY SSF56645 23 225 7.33E-46 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 217 2.0E-9 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LT40_RS15290 9aac31dfaffd94f45519548df14443e1 401 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 12 400 8.3E-184 T 23-04-2016 IPR023922 Sulphate-starvation-induced SfnB LT40_RS06710 3ff771355fd7458614b5229a6e312cff 173 SUPERFAMILY SSF52540 3 169 9.96E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06710 3ff771355fd7458614b5229a6e312cff 173 PIRSF PIRSF006135 1 171 3.4E-54 T 23-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 LT40_RS06710 3ff771355fd7458614b5229a6e312cff 173 PANTHER PTHR34848 1 171 2.5E-73 T 23-04-2016 LT40_RS06710 3ff771355fd7458614b5229a6e312cff 173 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 167 2.2E-59 T 23-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 LT40_RS06710 3ff771355fd7458614b5229a6e312cff 173 Gene3D G3DSA:3.40.50.300 3 169 2.1E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18720 b6541112de7e17a09fdf933244100504 175 Pfam PF00719 Inorganic pyrophosphatase 18 174 4.5E-54 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LT40_RS18720 b6541112de7e17a09fdf933244100504 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LT40_RS18720 b6541112de7e17a09fdf933244100504 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.484 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LT40_RS18720 b6541112de7e17a09fdf933244100504 175 SUPERFAMILY SSF50324 3 174 1.31E-68 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LT40_RS18720 b6541112de7e17a09fdf933244100504 175 PANTHER PTHR10286 6 174 1.0E-71 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LT40_RS18720 b6541112de7e17a09fdf933244100504 175 Gene3D G3DSA:3.90.80.10 3 174 8.5E-62 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 PANTHER PTHR11908 553 743 9.0E-233 T 23-04-2016 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 PANTHER PTHR11908 3 534 9.0E-233 T 23-04-2016 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 Gene3D G3DSA:3.30.365.10 174 278 1.0E-34 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 Gene3D G3DSA:3.30.365.10 354 443 3.3E-53 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 Gene3D G3DSA:3.30.365.10 605 735 3.3E-53 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 Gene3D G3DSA:3.30.365.10 446 604 4.1E-28 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 SMART SM01008 20 139 3.9E-34 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 SUPERFAMILY SSF54665 5 137 1.23E-33 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 Gene3D G3DSA:3.30.365.10 281 343 1.1E-9 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 Gene3D G3DSA:3.30.365.10 127 173 1.1E-9 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 SUPERFAMILY SSF56003 131 737 5.23E-159 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 160 678 7.1E-119 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 20 137 1.7E-20 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 Gene3D G3DSA:3.90.1170.50 3 126 4.9E-33 T 23-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 PANTHER PTHR11908:SF71 553 743 9.0E-233 T 23-04-2016 LT40_RS12505 6ca8e9e794edea982ad41f87a6d81e34 743 PANTHER PTHR11908:SF71 3 534 9.0E-233 T 23-04-2016 LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 SUPERFAMILY SSF48008 91 222 1.7E-22 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.5E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.5E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 SUPERFAMILY SSF46785 24 93 3.27E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 84 7.3E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 Gene3D G3DSA:1.10.10.10 16 86 6.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 Pfam PF07729 FCD domain 94 215 7.2E-20 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 SMART SM00345 26 84 1.1E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 PANTHER PTHR11751:SF436 26 110 2.2E-24 T 23-04-2016 LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 PANTHER PTHR11751 26 110 2.2E-24 T 23-04-2016 LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 SMART SM00895 94 215 2.1E-14 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS15510 b4ac3f65f1690f0756320d0608d93e8f 230 Gene3D G3DSA:1.20.120.530 91 227 1.4E-35 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 PANTHER PTHR24322 162 193 2.4E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 PANTHER PTHR24322 16 144 2.4E-49 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 SUPERFAMILY SSF51735 11 253 2.4E-81 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 1.3E-68 T 23-04-2016 LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 Gene3D G3DSA:3.40.50.720 8 253 2.2E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 193 7.0E-4 T 23-04-2016 LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 7.2E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 7.2E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 7.2E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 7.6E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 7.6E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 7.6E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 7.6E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 7.6E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 7.6E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS08545 39c84d593c27bf28d630ae6ec7aaad4e 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS13125 21fc96dc43c8978553796aeedb9c5a2e 433 Gene3D G3DSA:3.50.50.60 10 94 2.2E-66 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS13125 21fc96dc43c8978553796aeedb9c5a2e 433 Gene3D G3DSA:3.50.50.60 374 431 2.2E-66 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS13125 21fc96dc43c8978553796aeedb9c5a2e 433 Gene3D G3DSA:3.50.50.60 153 231 2.2E-66 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS13125 21fc96dc43c8978553796aeedb9c5a2e 433 PANTHER PTHR13847 9 431 3.4E-60 T 23-04-2016 LT40_RS13125 21fc96dc43c8978553796aeedb9c5a2e 433 Pfam PF01266 FAD dependent oxidoreductase 19 413 6.4E-62 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS13125 21fc96dc43c8978553796aeedb9c5a2e 433 Gene3D G3DSA:3.30.9.10 285 373 3.2E-10 T 23-04-2016 LT40_RS13125 21fc96dc43c8978553796aeedb9c5a2e 433 Gene3D G3DSA:3.30.9.10 99 152 3.2E-10 T 23-04-2016 LT40_RS13125 21fc96dc43c8978553796aeedb9c5a2e 433 Gene3D G3DSA:3.30.9.10 232 252 3.2E-10 T 23-04-2016 LT40_RS13125 21fc96dc43c8978553796aeedb9c5a2e 433 SUPERFAMILY SSF51905 18 232 4.4E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS13125 21fc96dc43c8978553796aeedb9c5a2e 433 SUPERFAMILY SSF51905 374 431 4.4E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS13125 21fc96dc43c8978553796aeedb9c5a2e 433 PANTHER PTHR13847:SF44 9 431 3.4E-60 T 23-04-2016 LT40_RS17055 4961ca48d9d53a7dfbc2df3a6d29363b 294 Gene3D G3DSA:1.10.3720.10 1 267 1.8E-56 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17055 4961ca48d9d53a7dfbc2df3a6d29363b 294 PANTHER PTHR30222:SF1 10 272 2.2E-84 T 23-04-2016 LT40_RS17055 4961ca48d9d53a7dfbc2df3a6d29363b 294 PANTHER PTHR30222 10 272 2.2E-84 T 23-04-2016 LT40_RS17055 4961ca48d9d53a7dfbc2df3a6d29363b 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 266 9.2E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17055 4961ca48d9d53a7dfbc2df3a6d29363b 294 SUPERFAMILY SSF161098 5 261 1.59E-51 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS01065 aa89b1131c7d5d4e60de8ebf892c6560 229 SUPERFAMILY SSF161098 8 206 3.92E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS01065 aa89b1131c7d5d4e60de8ebf892c6560 229 PANTHER PTHR30133 1 229 5.2E-147 T 23-04-2016 LT40_RS01065 aa89b1131c7d5d4e60de8ebf892c6560 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 2.5E-19 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS01065 aa89b1131c7d5d4e60de8ebf892c6560 229 Gene3D G3DSA:1.10.3720.10 8 220 1.8E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS01065 aa89b1131c7d5d4e60de8ebf892c6560 229 PANTHER PTHR30133:SF3 1 229 5.2E-147 T 23-04-2016 LT40_RS01065 aa89b1131c7d5d4e60de8ebf892c6560 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 220 4.8E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 PANTHER PTHR30386 29 137 1.1E-133 T 23-04-2016 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 Pfam PF13437 HlyD family secretion protein 309 415 5.9E-17 T 23-04-2016 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 321 342 1.1E-43 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 94 114 1.1E-43 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 354 378 1.1E-43 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 378 401 1.1E-43 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 422 437 1.1E-43 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 437 457 1.1E-43 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 52 75 1.1E-43 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 42 458 1.3E-128 T 23-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 SUPERFAMILY SSF111369 86 145 3.92E-5 T 23-04-2016 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 ProSitePatterns PS00543 HlyD family secretion proteins signature. 422 444 - T 23-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 PANTHER PTHR30386 168 458 1.1E-133 T 23-04-2016 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 PANTHER PTHR30386:SF4 168 458 1.1E-133 T 23-04-2016 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 PANTHER PTHR30386:SF4 29 137 1.1E-133 T 23-04-2016 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 Pfam PF13533 Biotin-lipoyl like 91 128 7.5E-8 T 23-04-2016 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 Gene3D G3DSA:2.40.50.100 85 116 4.9E-16 T 23-04-2016 LT40_RS15480 2b6651c52bd40c3cba261a32506ffe5f 458 Gene3D G3DSA:2.40.50.100 306 340 4.9E-16 T 23-04-2016 LT40_RS18315 a3d9bd0706662308ecdb1969d0ea1475 122 SUPERFAMILY SSF54736 51 122 9.94E-23 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LT40_RS18315 a3d9bd0706662308ecdb1969d0ea1475 122 SUPERFAMILY SSF48300 4 58 1.96E-14 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18315 a3d9bd0706662308ecdb1969d0ea1475 122 Gene3D G3DSA:3.30.1390.10 52 122 2.6E-30 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LT40_RS18315 a3d9bd0706662308ecdb1969d0ea1475 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 5.2E-42 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18315 a3d9bd0706662308ecdb1969d0ea1475 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 4.5E-27 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 LT40_RS18315 a3d9bd0706662308ecdb1969d0ea1475 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 23.576 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18315 a3d9bd0706662308ecdb1969d0ea1475 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 1.1E-16 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18315 a3d9bd0706662308ecdb1969d0ea1475 122 Gene3D G3DSA:1.20.5.710 2 51 3.4E-21 T 23-04-2016 LT40_RS18315 a3d9bd0706662308ecdb1969d0ea1475 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 122 1.0E-13 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 LT40_RS03255 fa8aee49b68277d75ae76769c58c7e83 289 SUPERFAMILY SSF53697 94 281 5.5E-38 T 23-04-2016 LT40_RS03255 fa8aee49b68277d75ae76769c58c7e83 289 SUPERFAMILY SSF46689 5 81 4.66E-21 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS03255 fa8aee49b68277d75ae76769c58c7e83 289 Pfam PF01380 SIS domain 128 256 4.2E-20 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LT40_RS03255 fa8aee49b68277d75ae76769c58c7e83 289 Gene3D G3DSA:1.10.10.10 4 82 1.0E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03255 fa8aee49b68277d75ae76769c58c7e83 289 Gene3D G3DSA:3.40.50.10490 99 267 1.4E-35 T 23-04-2016 LT40_RS03255 fa8aee49b68277d75ae76769c58c7e83 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 80 3.8E-29 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LT40_RS03255 fa8aee49b68277d75ae76769c58c7e83 289 PANTHER PTHR30514 1 282 7.4E-162 T 23-04-2016 LT40_RS03255 fa8aee49b68277d75ae76769c58c7e83 289 PANTHER PTHR30514:SF7 1 282 7.4E-162 T 23-04-2016 LT40_RS07040 e86ba093b80e688def113e5aa9560cf9 121 Gene3D G3DSA:2.60.120.10 16 117 6.6E-19 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS07040 e86ba093b80e688def113e5aa9560cf9 121 SUPERFAMILY SSF51182 6 115 2.41E-14 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS07040 e86ba093b80e688def113e5aa9560cf9 121 Pfam PF06249 Ethanolamine utilisation protein EutQ 32 116 9.2E-16 T 23-04-2016 IPR010424 Ethanolamine utilisation EutQ UniPathway: UPA00560 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 PANTHER PTHR11938:SF93 28 472 1.3E-286 T 23-04-2016 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 Gene3D G3DSA:1.10.1060.10 10 152 2.0E-44 T 23-04-2016 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 Gene3D G3DSA:3.40.50.720 153 239 7.2E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 Gene3D G3DSA:3.40.50.720 401 471 7.2E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 27 137 1.0E-37 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 Gene3D G3DSA:3.50.50.60 240 400 9.3E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 SUPERFAMILY SSF51971 148 401 8.83E-70 T 23-04-2016 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 SUPERFAMILY SSF46548 11 160 5.75E-39 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 150 459 5.2E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 PANTHER PTHR11938 28 472 1.3E-286 T 23-04-2016 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 9 472 4.7E-240 T 23-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 PRINTS PR00419 Adrenodoxin reductase family signature 151 173 4.1E-35 T 23-04-2016 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 PRINTS PR00419 Adrenodoxin reductase family signature 326 339 4.1E-35 T 23-04-2016 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 PRINTS PR00419 Adrenodoxin reductase family signature 216 226 4.1E-35 T 23-04-2016 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 4.1E-35 T 23-04-2016 LT40_RS14190 1492a05c42e5e6a53accb33e690ac9df 472 PRINTS PR00419 Adrenodoxin reductase family signature 174 187 4.1E-35 T 23-04-2016 LT40_RS01940 5433c46f8581cba0c348def96a63e61f 342 PANTHER PTHR11938 41 330 1.7E-93 T 23-04-2016 LT40_RS01940 5433c46f8581cba0c348def96a63e61f 342 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 335 49.315 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS01940 5433c46f8581cba0c348def96a63e61f 342 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 337 4.0E-127 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 LT40_RS01940 5433c46f8581cba0c348def96a63e61f 342 PIRSF PIRSF000164 8 341 1.4E-93 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 LT40_RS01940 5433c46f8581cba0c348def96a63e61f 342 Pfam PF01180 Dihydroorotate dehydrogenase 44 332 4.1E-85 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 LT40_RS01940 5433c46f8581cba0c348def96a63e61f 342 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 LT40_RS01940 5433c46f8581cba0c348def96a63e61f 342 Gene3D G3DSA:3.20.20.70 1 338 4.1E-120 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS01940 5433c46f8581cba0c348def96a63e61f 342 SUPERFAMILY SSF51395 1 336 4.03E-102 T 23-04-2016 LT40_RS16635 8364c72564f42236e1fb6c5409d02699 556 Pfam PF00990 Diguanylate cyclase, GGDEF domain 124 275 2.4E-32 T 23-04-2016 IPR000160 GGDEF domain LT40_RS16635 8364c72564f42236e1fb6c5409d02699 556 Pfam PF00563 EAL domain 298 533 9.1E-74 T 23-04-2016 IPR001633 EAL domain LT40_RS16635 8364c72564f42236e1fb6c5409d02699 556 SUPERFAMILY SSF141868 297 544 3.4E-86 T 23-04-2016 IPR001633 EAL domain LT40_RS16635 8364c72564f42236e1fb6c5409d02699 556 SMART SM00267 113 282 5.4E-39 T 23-04-2016 IPR000160 GGDEF domain LT40_RS16635 8364c72564f42236e1fb6c5409d02699 556 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 120 274 9.7E-23 T 23-04-2016 IPR000160 GGDEF domain LT40_RS16635 8364c72564f42236e1fb6c5409d02699 556 PANTHER PTHR33121:SF13 282 556 8.3E-82 T 23-04-2016 LT40_RS16635 8364c72564f42236e1fb6c5409d02699 556 PANTHER PTHR33121 282 556 8.3E-82 T 23-04-2016 LT40_RS16635 8364c72564f42236e1fb6c5409d02699 556 SMART SM00052 292 538 3.9E-110 T 23-04-2016 IPR001633 EAL domain LT40_RS16635 8364c72564f42236e1fb6c5409d02699 556 Gene3D G3DSA:3.30.70.270 126 289 1.5E-42 T 23-04-2016 LT40_RS16635 8364c72564f42236e1fb6c5409d02699 556 SUPERFAMILY SSF55073 129 284 1.26E-35 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS16635 8364c72564f42236e1fb6c5409d02699 556 Gene3D G3DSA:3.20.20.450 296 544 1.0E-95 T 23-04-2016 IPR001633 EAL domain LT40_RS20345 c37c5e07f77df818d86286d7a6f3e021 83 Pfam PF00886 Ribosomal protein S16 8 68 3.8E-23 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20345 c37c5e07f77df818d86286d7a6f3e021 83 PANTHER PTHR12919 1 76 1.1E-34 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20345 c37c5e07f77df818d86286d7a6f3e021 83 SUPERFAMILY SSF54565 1 76 5.1E-27 T 23-04-2016 IPR023803 Ribosomal protein S16 domain LT40_RS20345 c37c5e07f77df818d86286d7a6f3e021 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.473 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20345 c37c5e07f77df818d86286d7a6f3e021 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 2.9E-27 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS20345 c37c5e07f77df818d86286d7a6f3e021 83 Gene3D G3DSA:3.30.1320.10 1 77 3.2E-30 T 23-04-2016 IPR023803 Ribosomal protein S16 domain LT40_RS14920 a2a29212818734e1ee0e464650b65b2d 695 Gene3D G3DSA:2.40.170.20 154 695 2.8E-142 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS14920 a2a29212818734e1ee0e464650b65b2d 695 Pfam PF00593 TonB dependent receptor 456 692 2.7E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS14920 a2a29212818734e1ee0e464650b65b2d 695 PANTHER PTHR32552 27 695 1.7E-163 T 23-04-2016 LT40_RS14920 a2a29212818734e1ee0e464650b65b2d 695 SUPERFAMILY SSF56935 27 695 1.88E-130 T 23-04-2016 LT40_RS14920 a2a29212818734e1ee0e464650b65b2d 695 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 36 692 3.8E-117 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 LT40_RS14920 a2a29212818734e1ee0e464650b65b2d 695 Gene3D G3DSA:2.170.130.10 15 147 1.1E-34 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS14920 a2a29212818734e1ee0e464650b65b2d 695 Pfam PF07715 TonB-dependent Receptor Plug Domain 34 139 8.0E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS14920 a2a29212818734e1ee0e464650b65b2d 695 PANTHER PTHR32552:SF17 27 695 1.7E-163 T 23-04-2016 LT40_RS08510 1ad46bd0637db2f8fd5f35088c481c14 518 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 23-04-2016 IPR020845 AMP-binding, conserved site LT40_RS08510 1ad46bd0637db2f8fd5f35088c481c14 518 Pfam PF00501 AMP-binding enzyme 9 417 4.8E-85 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LT40_RS08510 1ad46bd0637db2f8fd5f35088c481c14 518 Gene3D G3DSA:2.30.38.10 337 410 9.2E-29 T 23-04-2016 LT40_RS08510 1ad46bd0637db2f8fd5f35088c481c14 518 Gene3D G3DSA:3.40.50.980 171 325 7.4E-32 T 23-04-2016 LT40_RS08510 1ad46bd0637db2f8fd5f35088c481c14 518 PANTHER PTHR24096 1 508 8.3E-185 T 23-04-2016 LT40_RS08510 1ad46bd0637db2f8fd5f35088c481c14 518 PANTHER PTHR24096:SF240 1 508 8.3E-185 T 23-04-2016 LT40_RS08510 1ad46bd0637db2f8fd5f35088c481c14 518 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 501 2.6E-17 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LT40_RS08510 1ad46bd0637db2f8fd5f35088c481c14 518 Gene3D G3DSA:3.40.50.980 3 170 2.2E-27 T 23-04-2016 LT40_RS08510 1ad46bd0637db2f8fd5f35088c481c14 518 SUPERFAMILY SSF56801 2 513 4.84E-135 T 23-04-2016 LT40_RS08510 1ad46bd0637db2f8fd5f35088c481c14 518 Gene3D G3DSA:3.30.300.30 418 515 6.2E-27 T 23-04-2016 LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 PANTHER PTHR21087 2 168 4.6E-65 T 23-04-2016 LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 PANTHER PTHR21087:SF0 2 168 4.6E-65 T 23-04-2016 LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 ProSitePatterns PS01128 Shikimate kinase signature. 57 82 - T 23-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 Hamap MF_00109 Shikimate kinase [aroK]. 1 167 30.024 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 PRINTS PR01100 Shikimate kinase family signature 74 83 4.2E-24 T 23-04-2016 LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 PRINTS PR01100 Shikimate kinase family signature 56 64 4.2E-24 T 23-04-2016 LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 PRINTS PR01100 Shikimate kinase family signature 28 41 4.2E-24 T 23-04-2016 LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 PRINTS PR01100 Shikimate kinase family signature 4 19 4.2E-24 T 23-04-2016 LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 PRINTS PR01100 Shikimate kinase family signature 95 112 4.2E-24 T 23-04-2016 LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 Gene3D G3DSA:3.40.50.300 2 167 8.2E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 Pfam PF01202 Shikimate kinase 10 167 2.1E-55 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS14210 ee09549a2ec96ecd5580f0c88d331a3b 172 SUPERFAMILY SSF52540 3 166 7.09E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16970 1e04b6e7ce41db156dcef4264bff8505 276 PANTHER PTHR30151 22 274 8.5E-108 T 23-04-2016 LT40_RS16970 1e04b6e7ce41db156dcef4264bff8505 276 Gene3D G3DSA:1.10.3720.10 74 270 1.3E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16970 1e04b6e7ce41db156dcef4264bff8505 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 268 8.8E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16970 1e04b6e7ce41db156dcef4264bff8505 276 PANTHER PTHR30151:SF0 22 274 8.5E-108 T 23-04-2016 LT40_RS16970 1e04b6e7ce41db156dcef4264bff8505 276 SUPERFAMILY SSF161098 76 258 6.93E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13655 8dfdd116f2912b2d3f3deb25a52f8c79 362 Gene3D G3DSA:1.50.10.10 13 360 1.7E-48 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 LT40_RS13655 8dfdd116f2912b2d3f3deb25a52f8c79 362 SUPERFAMILY SSF48208 13 355 2.04E-74 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 LT40_RS13655 8dfdd116f2912b2d3f3deb25a52f8c79 362 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 38 354 5.1E-35 T 23-04-2016 LT40_RS12120 c5407acff6b2ef30fdf80baacdc388ea 457 Gene3D G3DSA:3.40.605.10 6 242 1.0E-66 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS12120 c5407acff6b2ef30fdf80baacdc388ea 457 PANTHER PTHR11699 6 457 1.6E-233 T 23-04-2016 LT40_RS12120 c5407acff6b2ef30fdf80baacdc388ea 457 SUPERFAMILY SSF53720 6 454 2.62E-135 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS12120 c5407acff6b2ef30fdf80baacdc388ea 457 PANTHER PTHR11699:SF28 6 457 1.6E-233 T 23-04-2016 LT40_RS12120 c5407acff6b2ef30fdf80baacdc388ea 457 Pfam PF00171 Aldehyde dehydrogenase family 6 452 8.6E-133 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS12120 c5407acff6b2ef30fdf80baacdc388ea 457 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 256 267 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS12120 c5407acff6b2ef30fdf80baacdc388ea 457 Gene3D G3DSA:3.40.309.10 243 417 6.0E-59 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS13275 e0b5957aea697bc51855265db1f693e2 457 PANTHER PTHR30182 1 455 1.4E-234 T 23-04-2016 LT40_RS13275 e0b5957aea697bc51855265db1f693e2 457 Pfam PF03315 Serine dehydratase beta chain 4 154 6.5E-54 T 23-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 LT40_RS13275 e0b5957aea697bc51855265db1f693e2 457 Gene3D G3DSA:3.30.1330.90 11 155 5.2E-49 T 23-04-2016 IPR029009 Allosteric substrate binding domain LT40_RS13275 e0b5957aea697bc51855265db1f693e2 457 PANTHER PTHR30182:SF1 1 455 1.4E-234 T 23-04-2016 LT40_RS13275 e0b5957aea697bc51855265db1f693e2 457 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 454 1.4E-207 T 23-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 LT40_RS13275 e0b5957aea697bc51855265db1f693e2 457 SUPERFAMILY SSF143548 17 154 5.23E-43 T 23-04-2016 IPR029009 Allosteric substrate binding domain LT40_RS13275 e0b5957aea697bc51855265db1f693e2 457 Pfam PF03313 Serine dehydratase alpha chain 185 451 1.5E-102 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 Pfam PF13416 Bacterial extracellular solute-binding protein 43 327 1.0E-29 T 23-04-2016 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 SUPERFAMILY SSF53850 26 363 1.18E-96 T 23-04-2016 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 Gene3D G3DSA:3.40.190.10 138 312 1.0E-74 T 23-04-2016 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PANTHER PTHR30222:SF11 10 364 7.4E-191 T 23-04-2016 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PANTHER PTHR30222 10 364 7.4E-191 T 23-04-2016 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PIRSF PIRSF019574 3 364 6.3E-138 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 3.1E-63 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 213 232 3.1E-63 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 153 167 3.1E-63 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 90 103 3.1E-63 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 3.1E-63 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 74 88 3.1E-63 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 263 282 3.1E-63 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 3.1E-63 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 176 195 3.1E-63 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 308 334 3.1E-63 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LT40_RS17040 a898db5213f883e8c5a947277ba3d541 364 Gene3D G3DSA:3.40.190.10 41 137 8.3E-12 T 23-04-2016 LT40_RS04975 ef8ee531a087e681ed5ca806c50e4931 369 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 291 353 7.2E-13 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 LT40_RS04975 ef8ee531a087e681ed5ca806c50e4931 369 SUPERFAMILY SSF74653 252 366 5.36E-21 T 23-04-2016 LT40_RS04975 ef8ee531a087e681ed5ca806c50e4931 369 TIGRFAM TIGR02794 tolA_full: protein TolA 15 364 5.8E-56 T 23-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 LT40_RS04975 ef8ee531a087e681ed5ca806c50e4931 369 Pfam PF13103 TonB C terminal 281 345 1.0E-10 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 LT40_RS04975 ef8ee531a087e681ed5ca806c50e4931 369 Gene3D G3DSA:3.30.1150.10 249 367 1.1E-32 T 23-04-2016 LT40_RS19360 66b24f4501468ff047565237e39ee2e9 165 Gene3D G3DSA:3.10.50.30 89 162 9.5E-23 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LT40_RS19360 66b24f4501468ff047565237e39ee2e9 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 91 162 4.2E-21 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LT40_RS19360 66b24f4501468ff047565237e39ee2e9 165 PANTHER PTHR30437 1 162 2.8E-20 T 23-04-2016 LT40_RS19360 66b24f4501468ff047565237e39ee2e9 165 SUPERFAMILY SSF54534 89 161 4.32E-19 T 23-04-2016 LT40_RS19360 66b24f4501468ff047565237e39ee2e9 165 PIRSF PIRSF006092 6 165 1.5E-33 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 LT40_RS19360 66b24f4501468ff047565237e39ee2e9 165 PANTHER PTHR30437:SF6 1 162 2.8E-20 T 23-04-2016 LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 Gene3D G3DSA:2.40.110.10 161 268 1.9E-27 T 23-04-2016 LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 SUPERFAMILY SSF47203 287 475 6.6E-48 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 6.7E-13 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 271 1.0E-17 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 7.5E-12 T 23-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 593 1.0E-34 T 23-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 PANTHER PTHR10909 4 478 2.2E-261 T 23-04-2016 LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 Gene3D G3DSA:1.20.140.10 269 465 4.5E-47 T 23-04-2016 LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 Gene3D G3DSA:1.10.540.10 39 160 2.1E-18 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 SUPERFAMILY SSF56645 38 279 3.01E-60 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 282 451 4.6E-20 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS14015 6a10e8e665cb00e9c9dd59b3429131aa 601 PANTHER PTHR10909:SF154 4 478 2.2E-261 T 23-04-2016 LT40_RS03185 70baad0724bd4c85ff9e4ec5698ecdc6 205 SUPERFAMILY SSF48613 14 196 1.72E-47 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LT40_RS03185 70baad0724bd4c85ff9e4ec5698ecdc6 205 Gene3D G3DSA:1.20.910.10 6 195 7.5E-65 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LT40_RS03185 70baad0724bd4c85ff9e4ec5698ecdc6 205 Pfam PF01126 Heme oxygenase 107 192 1.3E-10 T 23-04-2016 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: REACT_9431 LT40_RS18725 d48609f516e9446cbd70fffc20d9f00d 266 PANTHER PTHR30164 1 256 1.8E-95 T 23-04-2016 LT40_RS18725 d48609f516e9446cbd70fffc20d9f00d 266 Pfam PF06167 Glucose-regulated metallo-peptidase M90 5 249 8.1E-89 T 23-04-2016 IPR010384 MtfA family LT40_RS18725 d48609f516e9446cbd70fffc20d9f00d 266 Gene3D G3DSA:3.40.390.10 39 250 3.9E-32 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LT40_RS18725 d48609f516e9446cbd70fffc20d9f00d 266 SUPERFAMILY SSF55486 41 251 3.59E-38 T 23-04-2016 LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 Gene3D G3DSA:3.40.50.300 3 234 4.2E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 PANTHER PTHR24220:SF319 319 359 5.0E-173 T 23-04-2016 LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 PANTHER PTHR24220:SF319 5 240 5.0E-173 T 23-04-2016 LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 Gene3D G3DSA:2.40.50.100 239 285 2.0E-20 T 23-04-2016 LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 Gene3D G3DSA:2.40.50.100 346 359 2.0E-20 T 23-04-2016 LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 Pfam PF08402 TOBE domain 281 352 1.0E-7 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 SUPERFAMILY SSF50331 236 356 1.28E-27 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 PANTHER PTHR24220 319 359 5.0E-173 T 23-04-2016 LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 PANTHER PTHR24220 5 240 5.0E-173 T 23-04-2016 LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 SMART SM00382 28 211 1.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 SUPERFAMILY SSF52540 4 240 9.1E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 Pfam PF00005 ABC transporter 20 161 9.4E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS09415 02be1221c8b5afb259d022c63b0ffb04 367 Gene3D G3DSA:2.40.50.140 286 345 5.3E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS19855 3652aa6cae2cda9f59a75b9dad5efdc4 172 PIRSF PIRSF029681 1 171 1.2E-47 T 23-04-2016 IPR018550 Lipid A 3-O-deacylase-related LT40_RS19855 3652aa6cae2cda9f59a75b9dad5efdc4 172 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 44 170 1.1E-26 T 23-04-2016 IPR018550 Lipid A 3-O-deacylase-related LT40_RS19855 3652aa6cae2cda9f59a75b9dad5efdc4 172 SUPERFAMILY SSF56925 52 154 6.28E-6 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LT40_RS19855 3652aa6cae2cda9f59a75b9dad5efdc4 172 Gene3D G3DSA:2.40.160.20 25 171 6.2E-50 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 LT40_RS10205 60385077d4b84ddb6ad035ca5e269243 181 PANTHER PTHR35023 1 181 7.7E-30 T 23-04-2016 LT40_RS10205 60385077d4b84ddb6ad035ca5e269243 181 PANTHER PTHR35023:SF1 1 181 7.7E-30 T 23-04-2016 LT40_RS10205 60385077d4b84ddb6ad035ca5e269243 181 Pfam PF13519 von Willebrand factor type A domain 26 131 1.5E-8 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS10205 60385077d4b84ddb6ad035ca5e269243 181 SUPERFAMILY SSF53300 27 143 1.41E-12 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS10205 60385077d4b84ddb6ad035ca5e269243 181 Gene3D G3DSA:3.40.50.410 27 135 8.3E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS17685 afbebdf9af99c84e55ee5d94c7083323 268 PIRSF PIRSF037318 2 266 3.1E-121 T 23-04-2016 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.-|UniPathway: UPA00958 LT40_RS17685 afbebdf9af99c84e55ee5d94c7083323 268 Gene3D G3DSA:1.10.510.10 108 187 2.2E-4 T 23-04-2016 LT40_RS17685 afbebdf9af99c84e55ee5d94c7083323 268 SUPERFAMILY SSF56112 35 227 3.61E-11 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS17685 afbebdf9af99c84e55ee5d94c7083323 268 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 21 231 1.1E-61 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 LT40_RS09390 8e2bc167ee34d451b22b5af0286472cd 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 7.8E-104 T 23-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS09390 8e2bc167ee34d451b22b5af0286472cd 187 PANTHER PTHR10681:SF121 1 187 9.0E-93 T 23-04-2016 LT40_RS09390 8e2bc167ee34d451b22b5af0286472cd 187 PIRSF PIRSF000239 1 187 2.8E-55 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 LT40_RS09390 8e2bc167ee34d451b22b5af0286472cd 187 Pfam PF00578 AhpC/TSA family 5 132 1.5E-34 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS09390 8e2bc167ee34d451b22b5af0286472cd 187 PANTHER PTHR10681 1 187 9.0E-93 T 23-04-2016 LT40_RS09390 8e2bc167ee34d451b22b5af0286472cd 187 Gene3D G3DSA:3.40.30.10 4 183 1.3E-65 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS09390 8e2bc167ee34d451b22b5af0286472cd 187 SUPERFAMILY SSF52833 1 186 9.67E-60 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS09390 8e2bc167ee34d451b22b5af0286472cd 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 2.0E-6 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LT40_RS05115 327f5baeca0fccade39a5f56a28cf8a1 260 Pfam PF00005 ABC transporter 29 155 1.7E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS05115 327f5baeca0fccade39a5f56a28cf8a1 260 PANTHER PTHR24220 14 221 2.5E-82 T 23-04-2016 LT40_RS05115 327f5baeca0fccade39a5f56a28cf8a1 260 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS05115 327f5baeca0fccade39a5f56a28cf8a1 260 SMART SM00382 37 204 3.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS05115 327f5baeca0fccade39a5f56a28cf8a1 260 Gene3D G3DSA:3.40.50.300 11 209 1.5E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05115 327f5baeca0fccade39a5f56a28cf8a1 260 PANTHER PTHR24220:SF365 14 221 2.5E-82 T 23-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 LT40_RS05115 327f5baeca0fccade39a5f56a28cf8a1 260 SUPERFAMILY SSF52540 13 210 5.33E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 PANTHER PTHR24095 6 643 0.0 T 23-04-2016 LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 Pfam PF00501 AMP-binding enzyme 83 522 1.3E-86 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 1.6E-23 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 23-04-2016 IPR020845 AMP-binding, conserved site LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 Gene3D G3DSA:3.30.300.30 518 626 1.9E-26 T 23-04-2016 LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 Gene3D G3DSA:2.30.38.10 440 515 4.6E-6 T 23-04-2016 LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.447 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 Gene3D G3DSA:3.40.50.980 79 266 1.8E-41 T 23-04-2016 LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 PANTHER PTHR24095:SF178 6 643 0.0 T 23-04-2016 LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 SUPERFAMILY SSF56801 13 642 2.75E-181 T 23-04-2016 LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 Gene3D G3DSA:3.40.50.980 267 424 2.6E-28 T 23-04-2016 LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.6E-24 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LT40_RS01055 1c53f74903aa4dd66ec35fa85adfecca 653 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 23-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 LT40_RS02810 78ff7c84b0b3b0db0463c576bb4f8b8d 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 26 93 4.2E-16 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 LT40_RS02810 78ff7c84b0b3b0db0463c576bb4f8b8d 272 SUPERFAMILY SSF53223 9 105 4.66E-26 T 23-04-2016 LT40_RS02810 78ff7c84b0b3b0db0463c576bb4f8b8d 272 SUPERFAMILY SSF51735 106 264 3.94E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02810 78ff7c84b0b3b0db0463c576bb4f8b8d 272 Gene3D G3DSA:3.40.50.720 111 263 2.3E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02810 78ff7c84b0b3b0db0463c576bb4f8b8d 272 PANTHER PTHR21089:SF9 6 271 1.4E-137 T 23-04-2016 LT40_RS02810 78ff7c84b0b3b0db0463c576bb4f8b8d 272 Gene3D G3DSA:3.40.192.10 25 110 1.9E-27 T 23-04-2016 LT40_RS02810 78ff7c84b0b3b0db0463c576bb4f8b8d 272 PANTHER PTHR21089 6 271 1.4E-137 T 23-04-2016 LT40_RS17605 75a235c8c8ebac13e39b946057805947 240 SUPERFAMILY SSF53681 118 229 8.83E-26 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS17605 75a235c8c8ebac13e39b946057805947 240 SUPERFAMILY SSF53681 1 116 8.5E-33 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS17605 75a235c8c8ebac13e39b946057805947 240 Gene3D G3DSA:3.40.50.1860 2 113 5.1E-39 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS17605 75a235c8c8ebac13e39b946057805947 240 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 3.9E-53 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS17605 75a235c8c8ebac13e39b946057805947 240 PANTHER PTHR21198:SF7 1 228 1.6E-67 T 23-04-2016 LT40_RS17605 75a235c8c8ebac13e39b946057805947 240 Gene3D G3DSA:3.40.50.1860 114 216 8.4E-30 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 LT40_RS17605 75a235c8c8ebac13e39b946057805947 240 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 235 3.4E-58 T 23-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 LT40_RS17605 75a235c8c8ebac13e39b946057805947 240 PANTHER PTHR21198 1 228 1.6E-67 T 23-04-2016 LT40_RS15775 4df27fa8bb0fbc3fa8e23e8f1a181ebf 444 Gene3D G3DSA:3.30.390.10 9 116 8.8E-9 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LT40_RS15775 4df27fa8bb0fbc3fa8e23e8f1a181ebf 444 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 5 444 8.8E-268 T 23-04-2016 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499|UniPathway: UPA00564 LT40_RS15775 4df27fa8bb0fbc3fa8e23e8f1a181ebf 444 SMART SM00922 184 284 3.8E-17 T 23-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LT40_RS15775 4df27fa8bb0fbc3fa8e23e8f1a181ebf 444 Pfam PF13378 Enolase C-terminal domain-like 188 404 1.6E-36 T 23-04-2016 IPR029065 Enolase C-terminal domain-like LT40_RS15775 4df27fa8bb0fbc3fa8e23e8f1a181ebf 444 SUPERFAMILY SSF51604 138 413 5.3E-84 T 23-04-2016 IPR029065 Enolase C-terminal domain-like LT40_RS15775 4df27fa8bb0fbc3fa8e23e8f1a181ebf 444 Gene3D G3DSA:3.20.20.120 117 396 3.6E-103 T 23-04-2016 IPR029065 Enolase C-terminal domain-like LT40_RS15775 4df27fa8bb0fbc3fa8e23e8f1a181ebf 444 PANTHER PTHR13794 172 429 7.6E-290 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LT40_RS15775 4df27fa8bb0fbc3fa8e23e8f1a181ebf 444 PANTHER PTHR13794 6 151 7.6E-290 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 LT40_RS15775 4df27fa8bb0fbc3fa8e23e8f1a181ebf 444 SUPERFAMILY SSF54826 7 136 2.36E-32 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LT40_RS15775 4df27fa8bb0fbc3fa8e23e8f1a181ebf 444 PANTHER PTHR13794:SF47 172 429 7.6E-290 T 23-04-2016 LT40_RS15775 4df27fa8bb0fbc3fa8e23e8f1a181ebf 444 PANTHER PTHR13794:SF47 6 151 7.6E-290 T 23-04-2016 LT40_RS14030 dc0e94d7877ae03fbba4650a93fea6ed 352 PANTHER PTHR22976 13 352 5.4E-187 T 23-04-2016 LT40_RS14030 dc0e94d7877ae03fbba4650a93fea6ed 352 SMART SM00729 49 261 9.2E-38 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LT40_RS14030 dc0e94d7877ae03fbba4650a93fea6ed 352 SUPERFAMILY SSF102114 11 318 1.7E-89 T 23-04-2016 LT40_RS14030 dc0e94d7877ae03fbba4650a93fea6ed 352 TIGRFAM TIGR00433 bioB: biotin synthase 21 316 6.7E-123 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 LT40_RS14030 dc0e94d7877ae03fbba4650a93fea6ed 352 SMART SM00876 226 318 2.4E-47 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 LT40_RS14030 dc0e94d7877ae03fbba4650a93fea6ed 352 PIRSF PIRSF001619 1 325 7.0E-133 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 LT40_RS14030 dc0e94d7877ae03fbba4650a93fea6ed 352 Pfam PF04055 Radical SAM superfamily 56 207 2.2E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS14030 dc0e94d7877ae03fbba4650a93fea6ed 352 Hamap MF_01694 Biotin synthase [bioB]. 11 319 41.512 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 LT40_RS14030 dc0e94d7877ae03fbba4650a93fea6ed 352 PANTHER PTHR22976:SF1 13 352 5.4E-187 T 23-04-2016 LT40_RS14030 dc0e94d7877ae03fbba4650a93fea6ed 352 Gene3D G3DSA:3.20.20.70 11 319 1.8E-102 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS14030 dc0e94d7877ae03fbba4650a93fea6ed 352 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 226 316 1.6E-19 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 LT40_RS03610 e548164d907d5f87363dec3c28c20627 336 PANTHER PTHR30465 191 334 5.9E-144 T 23-04-2016 LT40_RS03610 e548164d907d5f87363dec3c28c20627 336 PANTHER PTHR30465 1 169 5.9E-144 T 23-04-2016 LT40_RS03610 e548164d907d5f87363dec3c28c20627 336 Gene3D G3DSA:1.10.3720.10 200 325 1.1E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03610 e548164d907d5f87363dec3c28c20627 336 Gene3D G3DSA:1.10.3720.10 89 163 1.1E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03610 e548164d907d5f87363dec3c28c20627 336 SUPERFAMILY SSF161098 91 160 1.64E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03610 e548164d907d5f87363dec3c28c20627 336 SUPERFAMILY SSF161098 197 319 1.64E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03610 e548164d907d5f87363dec3c28c20627 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 3.8E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03610 e548164d907d5f87363dec3c28c20627 336 PANTHER PTHR30465:SF0 191 334 5.9E-144 T 23-04-2016 LT40_RS03610 e548164d907d5f87363dec3c28c20627 336 PANTHER PTHR30465:SF0 1 169 5.9E-144 T 23-04-2016 LT40_RS03210 cf3af39f6f2c623d6837425df851e0ca 608 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS03210 cf3af39f6f2c623d6837425df851e0ca 608 SUPERFAMILY SSF143975 1 418 9.68E-147 T 23-04-2016 LT40_RS03210 cf3af39f6f2c623d6837425df851e0ca 608 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS03210 cf3af39f6f2c623d6837425df851e0ca 608 Pfam PF00920 Dehydratase family 67 597 7.3E-163 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS03210 cf3af39f6f2c623d6837425df851e0ca 608 PANTHER PTHR21000 1 597 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS03210 cf3af39f6f2c623d6837425df851e0ca 608 PANTHER PTHR21000:SF9 1 597 0.0 T 23-04-2016 LT40_RS03210 cf3af39f6f2c623d6837425df851e0ca 608 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 601 0.0 T 23-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 LT40_RS03210 cf3af39f6f2c623d6837425df851e0ca 608 SUPERFAMILY SSF52016 419 600 6.28E-57 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS02055 baad38be4c9d36ce4505a24ed7405e3c 266 SUPERFAMILY SSF161098 6 265 2.52E-60 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02055 baad38be4c9d36ce4505a24ed7405e3c 266 PANTHER PTHR32243 6 266 7.1E-85 T 23-04-2016 LT40_RS02055 baad38be4c9d36ce4505a24ed7405e3c 266 Gene3D G3DSA:1.10.3720.10 7 253 8.6E-52 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02055 baad38be4c9d36ce4505a24ed7405e3c 266 PANTHER PTHR32243:SF18 6 266 7.1E-85 T 23-04-2016 LT40_RS02055 baad38be4c9d36ce4505a24ed7405e3c 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 256 3.5E-11 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09870 52eab2352b173f4a47ddd205162478cf 434 Gene3D G3DSA:1.20.1250.20 12 207 8.8E-40 T 23-04-2016 LT40_RS09870 52eab2352b173f4a47ddd205162478cf 434 Gene3D G3DSA:1.20.1250.20 226 412 5.8E-34 T 23-04-2016 LT40_RS09870 52eab2352b173f4a47ddd205162478cf 434 PIRSF PIRSF002808 2 427 8.6E-34 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LT40_RS09870 52eab2352b173f4a47ddd205162478cf 434 SUPERFAMILY SSF103473 7 414 2.88E-86 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS09870 52eab2352b173f4a47ddd205162478cf 434 PANTHER PTHR11662:SF3 7 413 5.1E-127 T 23-04-2016 LT40_RS09870 52eab2352b173f4a47ddd205162478cf 434 PANTHER PTHR11662 7 413 5.1E-127 T 23-04-2016 LT40_RS09870 52eab2352b173f4a47ddd205162478cf 434 Pfam PF07690 Major Facilitator Superfamily 20 377 3.7E-55 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS00735 ba0cad2789277afd0ded4fe905df4f98 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 196 2.6E-52 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 LT40_RS00735 ba0cad2789277afd0ded4fe905df4f98 210 Hamap MF_00165 Thymidylate kinase [tmk]. 4 205 30.658 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 LT40_RS00735 ba0cad2789277afd0ded4fe905df4f98 210 SUPERFAMILY SSF52540 3 199 3.47E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00735 ba0cad2789277afd0ded4fe905df4f98 210 Gene3D G3DSA:3.40.50.300 3 201 1.3E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00735 ba0cad2789277afd0ded4fe905df4f98 210 PANTHER PTHR10344 3 204 2.6E-66 T 23-04-2016 LT40_RS00735 ba0cad2789277afd0ded4fe905df4f98 210 Pfam PF02223 Thymidylate kinase 8 196 3.7E-48 T 23-04-2016 LT40_RS01200 61dff7f4bf759db13061e2ffd98ef00b 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS01200 61dff7f4bf759db13061e2ffd98ef00b 244 PANTHER PTHR24220:SF317 3 244 4.3E-188 T 23-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 LT40_RS01200 61dff7f4bf759db13061e2ffd98ef00b 244 Pfam PF00005 ABC transporter 17 165 4.6E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS01200 61dff7f4bf759db13061e2ffd98ef00b 244 PIRSF PIRSF039085 1 243 1.4E-103 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS01200 61dff7f4bf759db13061e2ffd98ef00b 244 PANTHER PTHR24220 3 244 4.3E-188 T 23-04-2016 LT40_RS01200 61dff7f4bf759db13061e2ffd98ef00b 244 SMART SM00382 26 213 7.8E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS01200 61dff7f4bf759db13061e2ffd98ef00b 244 Gene3D G3DSA:3.40.50.300 1 226 5.2E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01200 61dff7f4bf759db13061e2ffd98ef00b 244 SUPERFAMILY SSF52540 1 226 1.33E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04445 1e531e7c546f75610abfa4d12020915e 398 Pfam PF13679 Methyltransferase domain 159 296 4.0E-26 T 23-04-2016 IPR025714 Methyltransferase domain LT40_RS04445 1e531e7c546f75610abfa4d12020915e 398 PANTHER PTHR13369 159 365 2.0E-26 T 23-04-2016 LT40_RS04445 1e531e7c546f75610abfa4d12020915e 398 SUPERFAMILY SSF53335 173 312 1.42E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS04445 1e531e7c546f75610abfa4d12020915e 398 Gene3D G3DSA:3.40.50.150 183 294 8.6E-11 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS02835 9fd1b924c791332d0920102a876274e9 338 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 315 4.2E-57 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LT40_RS02835 9fd1b924c791332d0920102a876274e9 338 Gene3D G3DSA:3.40.190.10 269 327 2.0E-19 T 23-04-2016 LT40_RS02835 9fd1b924c791332d0920102a876274e9 338 Gene3D G3DSA:3.40.190.10 27 111 2.0E-19 T 23-04-2016 LT40_RS02835 9fd1b924c791332d0920102a876274e9 338 Gene3D G3DSA:3.40.190.100 112 268 5.1E-42 T 23-04-2016 LT40_RS02835 9fd1b924c791332d0920102a876274e9 338 PANTHER PTHR30177:SF14 31 320 4.5E-117 T 23-04-2016 LT40_RS02835 9fd1b924c791332d0920102a876274e9 338 PANTHER PTHR30177 31 320 4.5E-117 T 23-04-2016 LT40_RS02835 9fd1b924c791332d0920102a876274e9 338 SUPERFAMILY SSF53850 21 332 2.71E-74 T 23-04-2016 LT40_RS06060 7357180382cb63e03f2a59906f128bbf 180 Pfam PF00929 Exonuclease 5 174 2.9E-18 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS06060 7357180382cb63e03f2a59906f128bbf 180 Gene3D G3DSA:3.30.420.10 3 177 1.7E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS06060 7357180382cb63e03f2a59906f128bbf 180 SUPERFAMILY SSF53098 2 176 2.0E-28 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS06060 7357180382cb63e03f2a59906f128bbf 180 PANTHER PTHR23044 3 178 1.3E-57 T 23-04-2016 LT40_RS06060 7357180382cb63e03f2a59906f128bbf 180 PANTHER PTHR23044:SF5 3 178 1.3E-57 T 23-04-2016 LT40_RS06060 7357180382cb63e03f2a59906f128bbf 180 SMART SM00479 3 179 1.0E-10 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS04390 3fc4125b833067da364356ddc575fd45 210 SUPERFAMILY SSF46689 2 80 1.08E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS04390 3fc4125b833067da364356ddc575fd45 210 PANTHER PTHR30328:SF26 1 209 1.9E-46 T 23-04-2016 LT40_RS04390 3fc4125b833067da364356ddc575fd45 210 SUPERFAMILY SSF48498 83 201 4.45E-16 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LT40_RS04390 3fc4125b833067da364356ddc575fd45 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LT40_RS04390 3fc4125b833067da364356ddc575fd45 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 9.1E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS04390 3fc4125b833067da364356ddc575fd45 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 9.1E-12 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS04390 3fc4125b833067da364356ddc575fd45 210 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 203 3.2E-37 T 23-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 LT40_RS04390 3fc4125b833067da364356ddc575fd45 210 Gene3D G3DSA:1.10.357.10 62 203 3.9E-20 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS04390 3fc4125b833067da364356ddc575fd45 210 PANTHER PTHR30328 1 209 1.9E-46 T 23-04-2016 LT40_RS04390 3fc4125b833067da364356ddc575fd45 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.4E-18 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS04390 3fc4125b833067da364356ddc575fd45 210 Gene3D G3DSA:1.10.10.60 2 61 2.7E-23 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS19490 78670e8721f444b430ea1407acd28c70 154 Pfam PF14341 PilX N-terminal 2 46 4.6E-10 T 23-04-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain LT40_RS04780 050707c66db0e6190c344fb69105b5d1 274 PANTHER PTHR11807 6 262 1.5E-116 T 23-04-2016 LT40_RS04780 050707c66db0e6190c344fb69105b5d1 274 Gene3D G3DSA:3.40.50.620 20 200 1.4E-22 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS04780 050707c66db0e6190c344fb69105b5d1 274 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 1 264 57.223 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 LT40_RS04780 050707c66db0e6190c344fb69105b5d1 274 SUPERFAMILY SSF52402 10 228 4.19E-55 T 23-04-2016 LT40_RS04780 050707c66db0e6190c344fb69105b5d1 274 Pfam PF01171 PP-loop family 34 196 1.2E-14 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal LT40_RS04780 050707c66db0e6190c344fb69105b5d1 274 PANTHER PTHR11807:SF16 6 262 1.5E-116 T 23-04-2016 LT40_RS04780 050707c66db0e6190c344fb69105b5d1 274 PIRSF PIRSF004976 3 268 3.5E-71 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 LT40_RS14700 8c8937dba324d0228a1c770c9298233d 343 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 234 275 - T 23-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- LT40_RS14700 8c8937dba324d0228a1c770c9298233d 343 PANTHER PTHR10794 3 327 1.6E-71 T 23-04-2016 LT40_RS14700 8c8937dba324d0228a1c770c9298233d 343 SUPERFAMILY SSF53474 26 307 2.44E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS14700 8c8937dba324d0228a1c770c9298233d 343 Pfam PF00561 alpha/beta hydrolase fold 61 308 2.4E-16 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS14700 8c8937dba324d0228a1c770c9298233d 343 Gene3D G3DSA:3.40.50.1820 44 327 6.8E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS14700 8c8937dba324d0228a1c770c9298233d 343 PIRSF PIRSF005211 2 342 1.6E-109 T 23-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- LT40_RS20610 a65a108e8f166fb4128b76dcaea0e5cb 790 Pfam PF00577 Outer membrane usher protein 168 696 5.5E-77 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LT40_RS20610 a65a108e8f166fb4128b76dcaea0e5cb 790 PANTHER PTHR30451:SF8 21 787 8.1E-154 T 23-04-2016 LT40_RS20610 a65a108e8f166fb4128b76dcaea0e5cb 790 PANTHER PTHR30451 21 787 8.1E-154 T 23-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 LT40_RS20610 a65a108e8f166fb4128b76dcaea0e5cb 790 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 275 285 - T 23-04-2016 IPR018030 Fimbrial membrane usher, conserved site LT40_RS13650 ae2c0ab3b289e5caf97ac1b29e36fad0 190 PIRSF PIRSF016919 1 190 3.3E-65 T 23-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein LT40_RS13650 ae2c0ab3b289e5caf97ac1b29e36fad0 190 Pfam PF04955 HupE / UreJ protein 11 187 1.5E-60 T 23-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein LT40_RS10765 ca625157b30dfdbad9202a9df8f79574 319 Gene3D G3DSA:3.40.50.720 10 120 4.9E-28 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10765 ca625157b30dfdbad9202a9df8f79574 319 SUPERFAMILY SSF52283 10 141 3.21E-30 T 23-04-2016 LT40_RS10765 ca625157b30dfdbad9202a9df8f79574 319 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 311 9.3E-21 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LT40_RS10765 ca625157b30dfdbad9202a9df8f79574 319 PANTHER PTHR10996:SF152 1 318 6.9E-122 T 23-04-2016 LT40_RS10765 ca625157b30dfdbad9202a9df8f79574 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 286 5.6E-54 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LT40_RS10765 ca625157b30dfdbad9202a9df8f79574 319 PANTHER PTHR10996 1 318 6.9E-122 T 23-04-2016 LT40_RS10765 ca625157b30dfdbad9202a9df8f79574 319 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 152 179 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LT40_RS10765 ca625157b30dfdbad9202a9df8f79574 319 Gene3D G3DSA:3.40.50.720 121 288 1.3E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10765 ca625157b30dfdbad9202a9df8f79574 319 SUPERFAMILY SSF51735 106 287 1.43E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS20105 917be41942bb5283e6a14b7755b090aa 111 Pfam PF12021 Protein of unknown function (DUF3509) 5 86 1.1E-29 T 23-04-2016 IPR021898 Protein of unknown function DUF3509 LT40_RS05170 90da82298a3512c3cb83cbe26f1b3681 259 PIRSF PIRSF006648 2 257 5.0E-25 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LT40_RS05170 90da82298a3512c3cb83cbe26f1b3681 259 PANTHER PTHR30413:SF2 1 259 1.1E-147 T 23-04-2016 LT40_RS05170 90da82298a3512c3cb83cbe26f1b3681 259 PANTHER PTHR30413 1 259 1.1E-147 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LT40_RS05170 90da82298a3512c3cb83cbe26f1b3681 259 Pfam PF01061 ABC-2 type transporter 12 221 4.3E-40 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 LT40_RS05170 90da82298a3512c3cb83cbe26f1b3681 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 179 198 5.6E-12 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LT40_RS05170 90da82298a3512c3cb83cbe26f1b3681 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 142 166 5.6E-12 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LT40_RS05170 90da82298a3512c3cb83cbe26f1b3681 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 61 83 5.6E-12 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LT40_RS05170 90da82298a3512c3cb83cbe26f1b3681 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 5.6E-12 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LT40_RS05170 90da82298a3512c3cb83cbe26f1b3681 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 105 130 5.6E-12 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 Gene3D G3DSA:1.20.1580.10 584 710 3.2E-46 T 23-04-2016 LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 SUPERFAMILY SSF52540 313 445 8.89E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 SUPERFAMILY SSF52540 147 281 8.89E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 SUPERFAMILY SSF52540 11 93 8.89E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 ProSitePatterns PS00211 ABC transporters family signature. 720 734 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 ProSitePatterns PS00211 ABC transporters family signature. 370 384 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 Gene3D G3DSA:1.10.8.280 154 281 1.8E-23 T 23-04-2016 LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 SUPERFAMILY SSF52540 501 541 6.98E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 SUPERFAMILY SSF52540 574 803 6.98E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 Gene3D G3DSA:1.20.1580.10 282 360 3.9E-31 T 23-04-2016 LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 Gene3D G3DSA:1.20.1580.10 99 152 3.9E-31 T 23-04-2016 LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 Gene3D G3DSA:3.40.50.300 711 829 6.4E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 Gene3D G3DSA:3.40.50.300 10 57 1.4E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 Gene3D G3DSA:3.40.50.300 485 551 6.4E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 Gene3D G3DSA:3.40.50.300 361 476 1.4E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 PANTHER PTHR32282:SF4 564 830 0.0 T 23-04-2016 LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 PANTHER PTHR32282:SF4 7 543 0.0 T 23-04-2016 LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 Pfam PF00005 ABC transporter 504 750 1.0E-6 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 PANTHER PTHR32282 564 830 0.0 T 23-04-2016 LT40_RS10855 fcdd4c46d553323e15cc43e1a258d90f 834 PANTHER PTHR32282 7 543 0.0 T 23-04-2016 LT40_RS03430 fb63f436f8b2b68040eedd1ed06182c2 506 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 115 1.6E-20 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS03430 fb63f436f8b2b68040eedd1ed06182c2 506 SMART SM00382 282 478 7.0E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS03430 fb63f436f8b2b68040eedd1ed06182c2 506 Gene3D G3DSA:1.10.3720.10 12 221 4.8E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03430 fb63f436f8b2b68040eedd1ed06182c2 506 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS03430 fb63f436f8b2b68040eedd1ed06182c2 506 Pfam PF00005 ABC transporter 275 430 1.6E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS03430 fb63f436f8b2b68040eedd1ed06182c2 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 218 5.6E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03430 fb63f436f8b2b68040eedd1ed06182c2 506 SUPERFAMILY SSF161098 15 215 1.44E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03430 fb63f436f8b2b68040eedd1ed06182c2 506 PANTHER PTHR24220:SF327 259 503 1.5E-111 T 23-04-2016 LT40_RS03430 fb63f436f8b2b68040eedd1ed06182c2 506 Gene3D G3DSA:3.40.50.300 257 490 7.2E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03430 fb63f436f8b2b68040eedd1ed06182c2 506 PANTHER PTHR24220 259 503 1.5E-111 T 23-04-2016 LT40_RS03430 fb63f436f8b2b68040eedd1ed06182c2 506 SUPERFAMILY SSF52540 258 490 1.62E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03085 185c24382d2c2f70800600843652ec1c 254 SUPERFAMILY SSF52540 14 248 4.18E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03085 185c24382d2c2f70800600843652ec1c 254 Pfam PF00005 ABC transporter 30 178 9.0E-38 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS03085 185c24382d2c2f70800600843652ec1c 254 Gene3D G3DSA:3.40.50.300 14 250 7.7E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03085 185c24382d2c2f70800600843652ec1c 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS03085 185c24382d2c2f70800600843652ec1c 254 PANTHER PTHR24220 16 254 2.8E-175 T 23-04-2016 LT40_RS03085 185c24382d2c2f70800600843652ec1c 254 PANTHER PTHR24220:SF490 16 254 2.8E-175 T 23-04-2016 LT40_RS03085 185c24382d2c2f70800600843652ec1c 254 PIRSF PIRSF039085 11 254 3.3E-108 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS03085 185c24382d2c2f70800600843652ec1c 254 SMART SM00382 39 226 2.8E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS11465 4b07aabbd9becd23b477268a50132756 495 Pfam PF04055 Radical SAM superfamily 103 249 6.6E-11 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS11465 4b07aabbd9becd23b477268a50132756 495 Gene3D G3DSA:3.20.20.70 98 429 2.1E-36 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS11465 4b07aabbd9becd23b477268a50132756 495 PANTHER PTHR11228 345 458 4.6E-34 T 23-04-2016 LT40_RS11465 4b07aabbd9becd23b477268a50132756 495 PANTHER PTHR11228 44 329 4.6E-34 T 23-04-2016 LT40_RS11465 4b07aabbd9becd23b477268a50132756 495 TIGRFAM TIGR03978 rSAM_paired_1: His-Xaa-Ser system radical SAM maturase HxsB 13 480 7.8E-172 T 23-04-2016 IPR024023 His-Xaa-Ser system radical SAM maturase HxsB LT40_RS11465 4b07aabbd9becd23b477268a50132756 495 SUPERFAMILY SSF102114 97 428 1.14E-36 T 23-04-2016 LT40_RS11465 4b07aabbd9becd23b477268a50132756 495 Pfam PF13353 4Fe-4S single cluster domain 95 231 1.5E-8 T 23-04-2016 LT40_RS20805 870ab6e3a67ade33d9bbdfdfe0eb19af 166 SUPERFAMILY SSF51905 56 163 4.75E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS20805 870ab6e3a67ade33d9bbdfdfe0eb19af 166 PANTHER PTHR10742 54 121 1.7E-12 T 23-04-2016 LT40_RS20805 870ab6e3a67ade33d9bbdfdfe0eb19af 166 Gene3D G3DSA:3.50.50.60 56 90 1.2E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS20805 870ab6e3a67ade33d9bbdfdfe0eb19af 166 Gene3D G3DSA:3.90.660.10 91 124 3.6E-5 T 23-04-2016 LT40_RS20805 870ab6e3a67ade33d9bbdfdfe0eb19af 166 Pfam PF13450 NAD(P)-binding Rossmann-like domain 61 117 4.9E-10 T 23-04-2016 LT40_RS20805 870ab6e3a67ade33d9bbdfdfe0eb19af 166 PRINTS PR00419 Adrenodoxin reductase family signature 82 95 9.3E-6 T 23-04-2016 LT40_RS20805 870ab6e3a67ade33d9bbdfdfe0eb19af 166 PRINTS PR00419 Adrenodoxin reductase family signature 58 80 9.3E-6 T 23-04-2016 LT40_RS11285 8d5a4077cf506ab2368b0c99ab9667f6 235 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 15 85 1.9E-19 T 23-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 LT40_RS11285 8d5a4077cf506ab2368b0c99ab9667f6 235 SUPERFAMILY SSF55729 79 233 6.28E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS11285 8d5a4077cf506ab2368b0c99ab9667f6 235 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 235 44.435 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic LT40_RS11285 8d5a4077cf506ab2368b0c99ab9667f6 235 PIRSF PIRSF037208 1 235 9.7E-95 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic LT40_RS11285 8d5a4077cf506ab2368b0c99ab9667f6 235 Gene3D G3DSA:3.40.630.30 99 212 4.2E-4 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS11285 8d5a4077cf506ab2368b0c99ab9667f6 235 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 226 3.2E-39 T 23-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 LT40_RS11285 8d5a4077cf506ab2368b0c99ab9667f6 235 PANTHER PTHR21367 12 232 2.6E-75 T 23-04-2016 IPR030700 Arginine-tRNA-protein transferase LT40_RS12685 a2b7c5c54249bb05253761147ba9550a 103 Pfam PF03413 Peptidase propeptide and YPEB domain 41 100 2.9E-10 T 23-04-2016 IPR025711 PepSY domain LT40_RS17875 4af9aaa7e7e59309625fdfafcd8061ee 357 Pfam PF01757 Acyltransferase family 5 316 4.1E-22 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LT40_RS17875 4af9aaa7e7e59309625fdfafcd8061ee 357 PANTHER PTHR23028 3 337 3.9E-21 T 23-04-2016 LT40_RS11400 df093444ad48e9ca3e4c5caed2f55eeb 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 102 19.128 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 LT40_RS11400 df093444ad48e9ca3e4c5caed2f55eeb 102 PANTHER PTHR11434:SF4 5 102 2.0E-60 T 23-04-2016 LT40_RS11400 df093444ad48e9ca3e4c5caed2f55eeb 102 PANTHER PTHR11434 5 102 2.0E-60 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 LT40_RS11400 df093444ad48e9ca3e4c5caed2f55eeb 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 10 96 6.1E-24 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 Gene3D G3DSA:3.40.50.620 175 335 3.4E-29 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 SUPERFAMILY SSF143437 1 175 3.49E-45 T 23-04-2016 LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 PANTHER PTHR14911:SF15 3 418 2.4E-217 T 23-04-2016 LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 SUPERFAMILY SSF52402 182 374 3.31E-36 T 23-04-2016 LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 179 370 5.5E-56 T 23-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 PANTHER PTHR14911 3 418 2.4E-217 T 23-04-2016 LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 SUPERFAMILY SSF52821 381 482 9.51E-8 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 Gene3D G3DSA:3.40.250.10 375 481 5.6E-6 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 484 196.411 T 23-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 Pfam PF02926 THUMP domain 61 164 6.5E-17 T 23-04-2016 IPR004114 THUMP domain GO:0003723 LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 SMART SM00981 77 167 8.9E-21 T 23-04-2016 IPR004114 THUMP domain GO:0003723 LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 385 483 8.4E-36 T 23-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 LT40_RS14440 7181461a7fcbd3d4852133e2ceacdad0 484 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 371 1.7E-95 T 23-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 LT40_RS13810 8bab51272a2edbffa0cd46c5ced1b2c2 86 Gene3D G3DSA:2.30.30.100 1 74 2.5E-35 T 23-04-2016 LT40_RS13810 8bab51272a2edbffa0cd46c5ced1b2c2 86 PANTHER PTHR34772:SF1 1 85 2.9E-39 T 23-04-2016 LT40_RS13810 8bab51272a2edbffa0cd46c5ced1b2c2 86 PANTHER PTHR34772 1 85 2.9E-39 T 23-04-2016 LT40_RS13810 8bab51272a2edbffa0cd46c5ced1b2c2 86 SUPERFAMILY SSF50182 7 69 1.72E-23 T 23-04-2016 IPR010920 LSM domain LT40_RS13810 8bab51272a2edbffa0cd46c5ced1b2c2 86 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 64 26.913 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 LT40_RS13810 8bab51272a2edbffa0cd46c5ced1b2c2 86 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 64 2.1E-29 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 LT40_RS10290 70fb97f415ba25663324c93706a3d15b 141 SUPERFAMILY SSF159664 4 130 4.05E-34 T 23-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 LT40_RS10290 70fb97f415ba25663324c93706a3d15b 141 PANTHER PTHR37477 4 132 3.5E-19 T 23-04-2016 LT40_RS10290 70fb97f415ba25663324c93706a3d15b 141 Gene3D G3DSA:3.30.420.180 3 129 1.4E-30 T 23-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 LT40_RS10290 70fb97f415ba25663324c93706a3d15b 141 PANTHER PTHR37477:SF1 4 132 3.5E-19 T 23-04-2016 LT40_RS10290 70fb97f415ba25663324c93706a3d15b 141 Pfam PF01890 Cobalamin synthesis G C-terminus 4 128 5.0E-29 T 23-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 LT40_RS11640 34f818d7b9d49477439e4f8746bf0ccd 312 PANTHER PTHR30193:SF8 46 312 6.0E-83 T 23-04-2016 LT40_RS11640 34f818d7b9d49477439e4f8746bf0ccd 312 PANTHER PTHR30193 46 312 6.0E-83 T 23-04-2016 LT40_RS11640 34f818d7b9d49477439e4f8746bf0ccd 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 298 7.1E-9 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11640 34f818d7b9d49477439e4f8746bf0ccd 312 Gene3D G3DSA:1.10.3720.10 38 297 2.5E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11640 34f818d7b9d49477439e4f8746bf0ccd 312 SUPERFAMILY SSF161098 38 300 3.66E-54 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 Gene3D G3DSA:1.10.275.10 5 103 1.9E-35 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 Pfam PF00206 Lyase 19 297 1.8E-48 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 SUPERFAMILY SSF48557 10 444 5.97E-121 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 3.5E-25 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 3.5E-25 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 PRINTS PR00149 Fumarate lyase superfamily signature 101 119 3.5E-25 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 3.5E-25 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 Gene3D G3DSA:1.10.40.30 371 442 2.3E-27 T 23-04-2016 LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 SMART SM00998 364 443 2.0E-25 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 PANTHER PTHR11444 1 446 6.9E-204 T 23-04-2016 IPR000362 Fumarate lyase family LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 PANTHER PTHR11444:SF21 1 446 6.9E-204 T 23-04-2016 LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 Pfam PF10397 Adenylosuccinate lyase C-terminus 365 440 1.2E-18 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 Gene3D G3DSA:1.20.200.10 104 370 7.1E-89 T 23-04-2016 LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 2.7E-10 T 23-04-2016 LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 2.7E-10 T 23-04-2016 LT40_RS07980 5cc60c8986fc6eb4272f9006c01b9816 451 PRINTS PR00145 Argininosuccinate lyase family signature 141 161 2.7E-10 T 23-04-2016 LT40_RS09590 6ccafce257191f481f812c66697f416a 205 PIRSF PIRSF037290 4 203 2.4E-75 T 23-04-2016 IPR017166 Uncharacterised conserved protein UCP037290 LT40_RS09590 6ccafce257191f481f812c66697f416a 205 PANTHER PTHR35369:SF1 1 204 3.9E-75 T 23-04-2016 LT40_RS09590 6ccafce257191f481f812c66697f416a 205 PANTHER PTHR35369 1 204 3.9E-75 T 23-04-2016 LT40_RS09590 6ccafce257191f481f812c66697f416a 205 Gene3D G3DSA:3.40.50.300 49 161 7.9E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09590 6ccafce257191f481f812c66697f416a 205 SUPERFAMILY SSF52540 49 160 2.23E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02955 dd02dc913f52ee1f8c5c553f8ed73d92 174 Gene3D G3DSA:2.60.40.200 24 174 1.3E-46 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS02955 dd02dc913f52ee1f8c5c553f8ed73d92 174 PANTHER PTHR10003 7 174 9.0E-55 T 23-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 LT40_RS02955 dd02dc913f52ee1f8c5c553f8ed73d92 174 PANTHER PTHR10003:SF40 7 174 9.0E-55 T 23-04-2016 LT40_RS02955 dd02dc913f52ee1f8c5c553f8ed73d92 174 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 35 174 3.2E-30 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS02955 dd02dc913f52ee1f8c5c553f8ed73d92 174 SUPERFAMILY SSF49329 27 174 2.88E-47 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS02955 dd02dc913f52ee1f8c5c553f8ed73d92 174 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 66 76 - T 23-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 LT40_RS19100 ca2d306dd9650df1db112893ec23628d 238 Pfam PF09849 Uncharacterized protein conserved in bacteria (DUF2076) 1 235 2.3E-66 T 23-04-2016 IPR018648 Protein of unknown function DUF2076 LT40_RS19960 0e6e52355ec25cddd188988aa95d959e 273 PANTHER PTHR22726 8 273 2.5E-67 T 23-04-2016 LT40_RS19960 0e6e52355ec25cddd188988aa95d959e 273 Pfam PF01435 Peptidase family M48 73 258 4.0E-34 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LT40_RS19960 0e6e52355ec25cddd188988aa95d959e 273 Gene3D G3DSA:3.30.2010.10 71 158 9.8E-16 T 23-04-2016 LT40_RS11425 37b1c5268655194402e69d6a4975a8b5 550 Pfam PF08774 VRR-NUC domain 434 545 4.1E-32 T 23-04-2016 IPR014883 VRR-NUC domain GO:0016788 LT40_RS11425 37b1c5268655194402e69d6a4975a8b5 550 PANTHER PTHR15749 6 545 2.6E-145 T 23-04-2016 IPR033315 Fanconi-associated nuclease 1-like GO:0004518|GO:0036297 LT40_RS11425 37b1c5268655194402e69d6a4975a8b5 550 PANTHER PTHR15749:SF3 6 545 2.6E-145 T 23-04-2016 LT40_RS11425 37b1c5268655194402e69d6a4975a8b5 550 SMART SM00990 431 545 2.8E-46 T 23-04-2016 IPR014883 VRR-NUC domain GO:0016788 LT40_RS11425 37b1c5268655194402e69d6a4975a8b5 550 Gene3D G3DSA:1.25.40.10 219 304 3.4E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS08635 bb618890ea75ae86d3d82bb2efbc9129 126 Gene3D G3DSA:1.10.10.10 16 77 2.8E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08635 bb618890ea75ae86d3d82bb2efbc9129 126 Pfam PF00196 Bacterial regulatory proteins, luxR family 17 70 5.6E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS08635 bb618890ea75ae86d3d82bb2efbc9129 126 SMART SM00421 14 71 4.8E-11 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS08635 bb618890ea75ae86d3d82bb2efbc9129 126 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 17 31 2.2E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS08635 bb618890ea75ae86d3d82bb2efbc9129 126 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 31 47 2.2E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS08635 bb618890ea75ae86d3d82bb2efbc9129 126 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 47 59 2.2E-5 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS08635 bb618890ea75ae86d3d82bb2efbc9129 126 SUPERFAMILY SSF46894 15 78 9.18E-15 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS00390 281ceaccb7e9843a26efd09b1fc0ded2 244 SMART SM00235 47 171 6.8E-4 T 23-04-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 LT40_RS00390 281ceaccb7e9843a26efd09b1fc0ded2 244 Pfam PF01400 Astacin (Peptidase family M12A) 138 211 2.5E-7 T 23-04-2016 IPR001506 Peptidase M12A, astacin GO:0004222|GO:0006508 LT40_RS00390 281ceaccb7e9843a26efd09b1fc0ded2 244 Gene3D G3DSA:3.40.390.10 42 240 9.9E-29 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LT40_RS00390 281ceaccb7e9843a26efd09b1fc0ded2 244 SUPERFAMILY SSF55486 47 240 8.99E-27 T 23-04-2016 LT40_RS20330 f97ecd2ddb027494e8017f7de25c3565 403 SUPERFAMILY SSF56176 318 398 9.54E-18 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS20330 f97ecd2ddb027494e8017f7de25c3565 403 SUPERFAMILY SSF54631 179 319 4.3E-22 T 23-04-2016 LT40_RS20330 f97ecd2ddb027494e8017f7de25c3565 403 Gene3D G3DSA:3.10.580.10 173 298 1.6E-13 T 23-04-2016 LT40_RS20330 f97ecd2ddb027494e8017f7de25c3565 403 Gene3D G3DSA:3.30.465.10 299 395 1.9E-22 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS20330 f97ecd2ddb027494e8017f7de25c3565 403 Pfam PF03471 Transporter associated domain 324 394 3.1E-14 T 23-04-2016 IPR005170 Transporter-associated domain LT40_RS20330 f97ecd2ddb027494e8017f7de25c3565 403 Pfam PF00571 CBS domain 261 305 9.3E-6 T 23-04-2016 IPR000644 CBS domain LT40_RS20330 f97ecd2ddb027494e8017f7de25c3565 403 SMART SM01091 320 398 3.5E-19 T 23-04-2016 IPR005170 Transporter-associated domain LT40_RS20330 f97ecd2ddb027494e8017f7de25c3565 403 PANTHER PTHR22777 84 402 8.7E-66 T 23-04-2016 LT40_RS20330 f97ecd2ddb027494e8017f7de25c3565 403 Pfam PF01595 Domain of unknown function DUF21 12 166 7.2E-8 T 23-04-2016 IPR002550 Domain of unknown function DUF21 LT40_RS10615 8a0e430d39d1fc78c5806556493f0695 241 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 11 210 1.6E-37 T 23-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 LT40_RS10615 8a0e430d39d1fc78c5806556493f0695 241 Gene3D G3DSA:3.40.50.1000 13 225 4.3E-24 T 23-04-2016 IPR023214 HAD-like domain LT40_RS10615 8a0e430d39d1fc78c5806556493f0695 241 SUPERFAMILY SSF56784 13 240 1.79E-33 T 23-04-2016 IPR023214 HAD-like domain LT40_RS10615 8a0e430d39d1fc78c5806556493f0695 241 PANTHER PTHR12725:SF66 13 239 4.5E-41 T 23-04-2016 LT40_RS10615 8a0e430d39d1fc78c5806556493f0695 241 Pfam PF13242 HAD-hyrolase-like 162 235 3.4E-5 T 23-04-2016 LT40_RS10615 8a0e430d39d1fc78c5806556493f0695 241 PANTHER PTHR12725 13 239 4.5E-41 T 23-04-2016 LT40_RS10615 8a0e430d39d1fc78c5806556493f0695 241 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 99 197 4.5E-12 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS11875 9af1e04231df39df3b5b650d6fe91d8c 311 PANTHER PTHR30465 8 310 1.1E-97 T 23-04-2016 LT40_RS11875 9af1e04231df39df3b5b650d6fe91d8c 311 SUPERFAMILY SSF161098 99 294 4.45E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11875 9af1e04231df39df3b5b650d6fe91d8c 311 Gene3D G3DSA:1.10.3720.10 96 306 3.5E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11875 9af1e04231df39df3b5b650d6fe91d8c 311 PANTHER PTHR30465:SF0 8 310 1.1E-97 T 23-04-2016 LT40_RS11875 9af1e04231df39df3b5b650d6fe91d8c 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 3.8E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS04835 9c4e7758221833a6c2ffe01f1419133f 743 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 111 714 1.8E-99 T 23-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 LT40_RS04835 9c4e7758221833a6c2ffe01f1419133f 743 Gene3D G3DSA:3.60.15.10 493 703 2.4E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS04835 9c4e7758221833a6c2ffe01f1419133f 743 Pfam PF13567 Domain of unknown function (DUF4131) 10 167 1.8E-27 T 23-04-2016 IPR025405 Domain of unknown function DUF4131 LT40_RS04835 9c4e7758221833a6c2ffe01f1419133f 743 Pfam PF03772 Competence protein 198 462 1.8E-57 T 23-04-2016 IPR004477 ComEC/Rec2-related protein LT40_RS04835 9c4e7758221833a6c2ffe01f1419133f 743 SUPERFAMILY SSF56281 491 718 2.17E-43 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS04835 9c4e7758221833a6c2ffe01f1419133f 743 SMART SM00849 501 685 7.8E-17 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS04835 9c4e7758221833a6c2ffe01f1419133f 743 PANTHER PTHR30619:SF2 1 737 9.0E-179 T 23-04-2016 LT40_RS04835 9c4e7758221833a6c2ffe01f1419133f 743 PANTHER PTHR30619 1 737 9.0E-179 T 23-04-2016 LT40_RS04835 9c4e7758221833a6c2ffe01f1419133f 743 Pfam PF00753 Metallo-beta-lactamase superfamily 500 685 2.1E-17 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS04835 9c4e7758221833a6c2ffe01f1419133f 743 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 219 397 2.2E-23 T 23-04-2016 IPR004477 ComEC/Rec2-related protein LT40_RS17770 d84ff42d0d4bda0898c1d4d2a5953d4d 376 Gene3D G3DSA:3.40.50.2000 161 331 2.6E-28 T 23-04-2016 LT40_RS17770 d84ff42d0d4bda0898c1d4d2a5953d4d 376 PANTHER PTHR12526 26 366 9.5E-43 T 23-04-2016 LT40_RS17770 d84ff42d0d4bda0898c1d4d2a5953d4d 376 PANTHER PTHR12526:SF397 26 366 9.5E-43 T 23-04-2016 LT40_RS17770 d84ff42d0d4bda0898c1d4d2a5953d4d 376 SUPERFAMILY SSF53756 15 364 3.84E-57 T 23-04-2016 LT40_RS17770 d84ff42d0d4bda0898c1d4d2a5953d4d 376 Pfam PF00534 Glycosyl transferases group 1 184 329 9.9E-31 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 Pfam PF02779 Transketolase, pyrimidine binding domain 328 488 2.4E-37 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 SUPERFAMILY SSF52922 500 623 8.9E-31 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 22 624 4.8E-264 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 Pfam PF02780 Transketolase, C-terminal domain 503 619 2.0E-26 T 23-04-2016 IPR033248 Transketolase, C-terminal domain LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 Gene3D G3DSA:3.40.50.920 502 623 3.3E-34 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 ProSitePatterns PS00802 Transketolase signature 2. 433 449 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 SMART SM00861 327 491 1.3E-63 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 Gene3D G3DSA:3.40.50.970 343 489 6.8E-32 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 PANTHER PTHR11624:SF20 248 623 5.5E-302 T 23-04-2016 LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 PANTHER PTHR11624:SF20 31 225 5.5E-302 T 23-04-2016 LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 Gene3D G3DSA:3.40.50.970 249 342 1.5E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 Gene3D G3DSA:3.40.50.970 33 208 1.5E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 17 628 45.504 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 SUPERFAMILY SSF52518 325 512 2.31E-57 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 PANTHER PTHR11624 248 623 5.5E-302 T 23-04-2016 IPR033247 Transketolase family LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 PANTHER PTHR11624 31 225 5.5E-302 T 23-04-2016 IPR033247 Transketolase family LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 SUPERFAMILY SSF52518 15 206 6.68E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 SUPERFAMILY SSF52518 250 389 6.68E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS18615 5821449b1fea0cdec27a03170e6a3b90 632 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 18 289 1.4E-119 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 LT40_RS10395 03cc50cbb2b01f34306776403c068735 350 PANTHER PTHR11019 148 343 8.5E-27 T 23-04-2016 LT40_RS10395 03cc50cbb2b01f34306776403c068735 350 Pfam PF12833 Helix-turn-helix domain 260 335 2.6E-15 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10395 03cc50cbb2b01f34306776403c068735 350 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 29 209 2.7E-43 T 23-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal LT40_RS10395 03cc50cbb2b01f34306776403c068735 350 Gene3D G3DSA:1.10.10.60 288 336 4.3E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10395 03cc50cbb2b01f34306776403c068735 350 SMART SM00342 253 335 9.7E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10395 03cc50cbb2b01f34306776403c068735 350 SUPERFAMILY SSF46689 288 336 1.21E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10395 03cc50cbb2b01f34306776403c068735 350 PANTHER PTHR11019:SF52 148 343 8.5E-27 T 23-04-2016 LT40_RS10395 03cc50cbb2b01f34306776403c068735 350 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 319 335 2.6E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS10395 03cc50cbb2b01f34306776403c068735 350 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 304 319 2.6E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LT40_RS13425 3c511d88ae977a68a1bd1b2dea44b895 180 PANTHER PTHR22769:SF25 16 170 1.1E-26 T 23-04-2016 LT40_RS13425 3c511d88ae977a68a1bd1b2dea44b895 180 PIRSF PIRSF017340 8 179 9.5E-75 T 23-04-2016 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 LT40_RS13425 3c511d88ae977a68a1bd1b2dea44b895 180 PANTHER PTHR22769 16 170 1.1E-26 T 23-04-2016 LT40_RS13425 3c511d88ae977a68a1bd1b2dea44b895 180 Pfam PF00293 NUDIX domain 45 156 1.5E-18 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LT40_RS13425 3c511d88ae977a68a1bd1b2dea44b895 180 SUPERFAMILY SSF55811 17 175 1.22E-33 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS13425 3c511d88ae977a68a1bd1b2dea44b895 180 Gene3D G3DSA:3.90.79.10 11 175 6.7E-49 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 Gene3D G3DSA:3.20.20.450 424 675 1.4E-100 T 23-04-2016 IPR001633 EAL domain LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 409 2.0E-30 T 23-04-2016 IPR000160 GGDEF domain LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 Pfam PF00563 EAL domain 427 662 2.0E-75 T 23-04-2016 IPR001633 EAL domain LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 SMART SM00267 239 411 3.6E-44 T 23-04-2016 IPR000160 GGDEF domain LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 Gene3D G3DSA:3.30.70.270 251 418 1.1E-44 T 23-04-2016 LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 SUPERFAMILY SSF55073 255 411 2.51E-38 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 PANTHER PTHR33121:SF13 371 679 8.1E-93 T 23-04-2016 LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 PANTHER PTHR33121:SF13 41 53 8.1E-93 T 23-04-2016 LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 250 407 1.6E-38 T 23-04-2016 IPR000160 GGDEF domain LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 SMART SM00052 421 667 4.0E-118 T 23-04-2016 IPR001633 EAL domain LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 PANTHER PTHR33121 371 679 8.1E-93 T 23-04-2016 LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 PANTHER PTHR33121 41 53 8.1E-93 T 23-04-2016 LT40_RS04210 f338b0450e000e7f410d4f5be8fcd305 689 SUPERFAMILY SSF141868 426 674 3.66E-92 T 23-04-2016 IPR001633 EAL domain LT40_RS14695 e5770d37c45f871e4ee49954fc5f2e87 195 PANTHER PTHR18895 16 194 2.5E-41 T 23-04-2016 LT40_RS14695 e5770d37c45f871e4ee49954fc5f2e87 195 Pfam PF03602 Conserved hypothetical protein 95 16 192 3.5E-59 T 23-04-2016 LT40_RS14695 e5770d37c45f871e4ee49954fc5f2e87 195 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 12 194 1.5E-54 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS14695 e5770d37c45f871e4ee49954fc5f2e87 195 PIRSF PIRSF004553 15 195 6.4E-52 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LT40_RS14695 e5770d37c45f871e4ee49954fc5f2e87 195 PANTHER PTHR18895:SF60 16 194 2.5E-41 T 23-04-2016 LT40_RS14695 e5770d37c45f871e4ee49954fc5f2e87 195 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 129 135 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LT40_RS14695 e5770d37c45f871e4ee49954fc5f2e87 195 Gene3D G3DSA:3.40.50.150 8 194 1.9E-61 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14695 e5770d37c45f871e4ee49954fc5f2e87 195 SUPERFAMILY SSF53335 16 193 6.4E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS03195 c4c0b6db90248f206398c24cee73cb2e 312 Pfam PF16344 Domain of unknown function (DUF4974) 229 295 3.2E-8 T 23-04-2016 IPR032508 Protein FecR, C-terminal LT40_RS03195 c4c0b6db90248f206398c24cee73cb2e 312 PIRSF PIRSF018266 7 311 7.6E-68 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component LT40_RS03195 c4c0b6db90248f206398c24cee73cb2e 312 PANTHER PTHR30273 9 311 1.1E-39 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component LT40_RS03195 c4c0b6db90248f206398c24cee73cb2e 312 Pfam PF16220 Domain of unknown function (DUF4880) 17 56 4.3E-9 T 23-04-2016 IPR032623 FecR, N-terminal LT40_RS03195 c4c0b6db90248f206398c24cee73cb2e 312 Pfam PF04773 FecR protein 111 201 6.2E-18 T 23-04-2016 IPR006860 FecR protein LT40_RS15690 a2fad178013c7f448917c479d7ad57f1 212 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 19 202 26.238 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 LT40_RS15690 a2fad178013c7f448917c479d7ad57f1 212 Gene3D G3DSA:3.40.50.300 13 202 3.3E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15690 a2fad178013c7f448917c479d7ad57f1 212 SUPERFAMILY SSF52540 23 203 1.71E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS15690 a2fad178013c7f448917c479d7ad57f1 212 Pfam PF01926 50S ribosome-binding GTPase 33 150 3.1E-17 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS15690 a2fad178013c7f448917c479d7ad57f1 212 PANTHER PTHR11649 13 203 8.2E-51 T 23-04-2016 LT40_RS15690 a2fad178013c7f448917c479d7ad57f1 212 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 14 198 1.4E-68 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 LT40_RS14315 692490aee87c838afdd1199488675479 133 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 53 104 7.0E-23 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 LT40_RS14315 692490aee87c838afdd1199488675479 133 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 104 1.3E-33 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 LT40_RS14315 692490aee87c838afdd1199488675479 133 PANTHER PTHR21256 1 126 1.2E-64 T 23-04-2016 LT40_RS14315 692490aee87c838afdd1199488675479 133 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 4 108 32.698 T 23-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 LT40_RS14315 692490aee87c838afdd1199488675479 133 SUPERFAMILY SSF141734 4 120 1.83E-48 T 23-04-2016 LT40_RS02220 2df96ea2fc8a1adf69055b79288bd71e 386 PANTHER PTHR12756 13 301 2.6E-122 T 23-04-2016 LT40_RS02220 2df96ea2fc8a1adf69055b79288bd71e 386 PANTHER PTHR12756:SF18 13 301 2.6E-122 T 23-04-2016 LT40_RS02220 2df96ea2fc8a1adf69055b79288bd71e 386 Gene3D G3DSA:3.40.630.10 112 354 1.4E-37 T 23-04-2016 LT40_RS02220 2df96ea2fc8a1adf69055b79288bd71e 386 Pfam PF00246 Zinc carboxypeptidase 144 261 8.7E-18 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 LT40_RS02220 2df96ea2fc8a1adf69055b79288bd71e 386 SUPERFAMILY SSF53187 116 362 1.16E-52 T 23-04-2016 LT40_RS02220 2df96ea2fc8a1adf69055b79288bd71e 386 SMART SM00631 124 337 6.0E-4 T 23-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 LT40_RS05725 e580668d0b0afb0bfcf861aeca42d34a 320 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 6 314 9.0E-122 T 23-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- LT40_RS05725 e580668d0b0afb0bfcf861aeca42d34a 320 PANTHER PTHR11695 11 317 4.7E-115 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS05725 e580668d0b0afb0bfcf861aeca42d34a 320 PANTHER PTHR11695:SF610 11 317 4.7E-115 T 23-04-2016 LT40_RS05725 e580668d0b0afb0bfcf861aeca42d34a 320 SUPERFAMILY SSF51735 106 278 4.93E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS05725 e580668d0b0afb0bfcf861aeca42d34a 320 Gene3D G3DSA:3.40.50.720 141 252 5.9E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS05725 e580668d0b0afb0bfcf861aeca42d34a 320 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 187 202 - T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 LT40_RS05725 e580668d0b0afb0bfcf861aeca42d34a 320 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 82 8.1E-7 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LT40_RS05725 e580668d0b0afb0bfcf861aeca42d34a 320 SUPERFAMILY SSF50129 10 136 2.99E-35 T 23-04-2016 IPR011032 GroES-like LT40_RS05725 e580668d0b0afb0bfcf861aeca42d34a 320 Gene3D G3DSA:3.90.180.10 11 140 3.4E-43 T 23-04-2016 IPR011032 GroES-like LT40_RS05725 e580668d0b0afb0bfcf861aeca42d34a 320 SMART SM00829 6 313 2.6E-38 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LT40_RS05725 e580668d0b0afb0bfcf861aeca42d34a 320 Pfam PF00107 Zinc-binding dehydrogenase 146 260 4.7E-20 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LT40_RS06460 d65330bff4387b2f059d120c1bea0693 232 PANTHER PTHR38451 2 232 9.4E-61 T 23-04-2016 LT40_RS06460 d65330bff4387b2f059d120c1bea0693 232 SUPERFAMILY SSF53335 7 153 1.91E-5 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS06460 d65330bff4387b2f059d120c1bea0693 232 Gene3D G3DSA:3.40.50.150 16 81 2.4E-4 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS06460 d65330bff4387b2f059d120c1bea0693 232 PIRSF PIRSF018637 4 231 6.6E-59 T 23-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 LT40_RS06460 d65330bff4387b2f059d120c1bea0693 232 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 23 227 6.5E-58 T 23-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 LT40_RS18940 20c26c853d08a294a19b7a2fe4092d7f 205 PANTHER PTHR21600 146 201 1.3E-87 T 23-04-2016 LT40_RS18940 20c26c853d08a294a19b7a2fe4092d7f 205 PANTHER PTHR21600 24 129 1.3E-87 T 23-04-2016 LT40_RS18940 20c26c853d08a294a19b7a2fe4092d7f 205 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 32 201 5.9E-60 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LT40_RS18940 20c26c853d08a294a19b7a2fe4092d7f 205 SUPERFAMILY SSF55120 26 204 4.32E-44 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS18940 20c26c853d08a294a19b7a2fe4092d7f 205 PANTHER PTHR21600:SF23 146 201 1.3E-87 T 23-04-2016 LT40_RS18940 20c26c853d08a294a19b7a2fe4092d7f 205 PANTHER PTHR21600:SF23 24 129 1.3E-87 T 23-04-2016 LT40_RS18940 20c26c853d08a294a19b7a2fe4092d7f 205 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 63 77 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LT40_RS18940 20c26c853d08a294a19b7a2fe4092d7f 205 Pfam PF00849 RNA pseudouridylate synthase 29 172 1.0E-14 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS05255 68498473f7a3edd06077160e42bd629c 336 PANTHER PTHR11203:SF35 8 314 1.9E-70 T 23-04-2016 LT40_RS05255 68498473f7a3edd06077160e42bd629c 336 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 4 328 2.8E-149 T 23-04-2016 IPR026360 Putative exonuclease, DNA ligase-associated LT40_RS05255 68498473f7a3edd06077160e42bd629c 336 Gene3D G3DSA:3.60.15.10 26 137 4.7E-13 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS05255 68498473f7a3edd06077160e42bd629c 336 PANTHER PTHR11203 8 314 1.9E-70 T 23-04-2016 LT40_RS05255 68498473f7a3edd06077160e42bd629c 336 SUPERFAMILY SSF56281 10 326 9.52E-60 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS18690 186ef11f03ad9e8f70ae8916b4f1d978 220 SUPERFAMILY SSF161098 13 201 6.93E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18690 186ef11f03ad9e8f70ae8916b4f1d978 220 Gene3D G3DSA:1.10.3720.10 11 208 1.6E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18690 186ef11f03ad9e8f70ae8916b4f1d978 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 107 2.4E-24 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS18690 186ef11f03ad9e8f70ae8916b4f1d978 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 201 7.2E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18690 186ef11f03ad9e8f70ae8916b4f1d978 220 PANTHER PTHR30614 1 218 4.6E-48 T 23-04-2016 LT40_RS02515 58d319805e80f9195f9f600e29a50ea1 262 SUPERFAMILY SSF75708 37 261 2.48E-59 T 23-04-2016 LT40_RS02515 58d319805e80f9195f9f600e29a50ea1 262 PANTHER PTHR22617 64 262 4.6E-61 T 23-04-2016 LT40_RS02515 58d319805e80f9195f9f600e29a50ea1 262 Gene3D G3DSA:1.10.287.500 76 201 1.6E-45 T 23-04-2016 LT40_RS02515 58d319805e80f9195f9f600e29a50ea1 262 PANTHER PTHR22617:SF35 64 262 4.6E-61 T 23-04-2016 LT40_RS02515 58d319805e80f9195f9f600e29a50ea1 262 PIRSF PIRSF002884 25 262 2.2E-91 T 23-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- LT40_RS02515 58d319805e80f9195f9f600e29a50ea1 262 Pfam PF04344 Chemotaxis phosphatase, CheZ 49 262 5.8E-73 T 23-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- LT40_RS07970 4cf96cd87de51881f44ecb81d8790f2a 353 PANTHER PTHR10799:SF710 92 341 2.7E-21 T 23-04-2016 LT40_RS07970 4cf96cd87de51881f44ecb81d8790f2a 353 Pfam PF00990 Diguanylate cyclase, GGDEF domain 187 341 2.8E-32 T 23-04-2016 IPR000160 GGDEF domain LT40_RS07970 4cf96cd87de51881f44ecb81d8790f2a 353 PANTHER PTHR10799 92 341 2.7E-21 T 23-04-2016 LT40_RS07970 4cf96cd87de51881f44ecb81d8790f2a 353 SMART SM00267 175 345 2.0E-39 T 23-04-2016 IPR000160 GGDEF domain LT40_RS07970 4cf96cd87de51881f44ecb81d8790f2a 353 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 186 345 6.3E-38 T 23-04-2016 IPR000160 GGDEF domain LT40_RS07970 4cf96cd87de51881f44ecb81d8790f2a 353 Gene3D G3DSA:3.30.70.270 189 345 6.2E-38 T 23-04-2016 LT40_RS07970 4cf96cd87de51881f44ecb81d8790f2a 353 Pfam PF05230 MASE2 domain 15 104 7.2E-22 T 23-04-2016 IPR007894 MASE2 LT40_RS07970 4cf96cd87de51881f44ecb81d8790f2a 353 SUPERFAMILY SSF55073 191 344 2.28E-37 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS07860 29ce6f828684413daf1db01ebf0789ce 317 PIRSF PIRSF017082 1 317 7.0E-94 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 LT40_RS07860 29ce6f828684413daf1db01ebf0789ce 317 PANTHER PTHR30349:SF16 1 275 6.3E-62 T 23-04-2016 LT40_RS07860 29ce6f828684413daf1db01ebf0789ce 317 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 47 309 1.8E-53 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 LT40_RS07860 29ce6f828684413daf1db01ebf0789ce 317 SUPERFAMILY SSF53850 55 276 6.67E-9 T 23-04-2016 LT40_RS07860 29ce6f828684413daf1db01ebf0789ce 317 PANTHER PTHR30349 1 275 6.3E-62 T 23-04-2016 LT40_RS11905 790c290b294d4096bda33ca28bd025e4 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 169 2.7E-13 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS11905 790c290b294d4096bda33ca28bd025e4 699 Gene3D G3DSA:2.40.170.20 173 699 4.0E-71 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS11905 790c290b294d4096bda33ca28bd025e4 699 PANTHER PTHR32552 34 699 6.6E-40 T 23-04-2016 LT40_RS11905 790c290b294d4096bda33ca28bd025e4 699 Pfam PF00593 TonB dependent receptor 445 696 7.9E-28 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS11905 790c290b294d4096bda33ca28bd025e4 699 SUPERFAMILY SSF56935 35 699 4.03E-90 T 23-04-2016 LT40_RS11905 790c290b294d4096bda33ca28bd025e4 699 Gene3D G3DSA:2.170.130.10 33 172 1.2E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS05955 4e4fd6286e2aa53c3560986a3e993409 151 SMART SM00855 2 110 7.1E-7 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LT40_RS05955 4e4fd6286e2aa53c3560986a3e993409 151 PANTHER PTHR20935 6 77 8.6E-13 T 23-04-2016 LT40_RS05955 4e4fd6286e2aa53c3560986a3e993409 151 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 66 1.6E-11 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 LT40_RS05955 4e4fd6286e2aa53c3560986a3e993409 151 SUPERFAMILY SSF53254 1 133 1.33E-21 T 23-04-2016 IPR029033 Histidine phosphatase superfamily LT40_RS05955 4e4fd6286e2aa53c3560986a3e993409 151 Gene3D G3DSA:3.40.50.1240 1 149 1.4E-30 T 23-04-2016 IPR029033 Histidine phosphatase superfamily LT40_RS05955 4e4fd6286e2aa53c3560986a3e993409 151 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 128 4.4E-25 T 23-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- LT40_RS01780 68877cf2b1a8909a1e6d622f9f9d1d7d 327 PANTHER PTHR34351:SF1 18 327 1.4E-65 T 23-04-2016 LT40_RS01780 68877cf2b1a8909a1e6d622f9f9d1d7d 327 Pfam PF01882 Protein of unknown function DUF58 223 295 2.2E-11 T 23-04-2016 IPR002881 Domain of unknown function DUF58 LT40_RS01780 68877cf2b1a8909a1e6d622f9f9d1d7d 327 PANTHER PTHR34351 18 327 1.4E-65 T 23-04-2016 LT40_RS08910 2f2d5f5e3ea75a004246cf6d6235c9ec 91 PANTHER PTHR10657 5 87 9.6E-30 T 23-04-2016 LT40_RS08910 2f2d5f5e3ea75a004246cf6d6235c9ec 91 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 29 49 - T 23-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site LT40_RS08910 2f2d5f5e3ea75a004246cf6d6235c9ec 91 SUPERFAMILY SSF54534 3 88 3.27E-25 T 23-04-2016 LT40_RS08910 2f2d5f5e3ea75a004246cf6d6235c9ec 91 Pfam PF00639 PPIC-type PPIASE domain 11 87 1.7E-17 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 LT40_RS08910 2f2d5f5e3ea75a004246cf6d6235c9ec 91 Gene3D G3DSA:3.10.50.40 2 90 1.6E-29 T 23-04-2016 LT40_RS19990 8e0fc9fc4ebb881aba104c4c3212b428 235 PRINTS PR01021 OMPA domain signature 151 166 4.0E-10 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS19990 8e0fc9fc4ebb881aba104c4c3212b428 235 PRINTS PR01021 OMPA domain signature 121 143 4.0E-10 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS19990 8e0fc9fc4ebb881aba104c4c3212b428 235 PRINTS PR01021 OMPA domain signature 166 182 4.0E-10 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 LT40_RS19990 8e0fc9fc4ebb881aba104c4c3212b428 235 Gene3D G3DSA:3.30.1330.60 99 221 1.3E-38 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS19990 8e0fc9fc4ebb881aba104c4c3212b428 235 Pfam PF00691 OmpA family 120 215 7.2E-23 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS19990 8e0fc9fc4ebb881aba104c4c3212b428 235 Pfam PF13488 Glycine zipper 47 90 4.9E-9 T 23-04-2016 LT40_RS19990 8e0fc9fc4ebb881aba104c4c3212b428 235 SUPERFAMILY SSF103088 108 223 2.49E-37 T 23-04-2016 IPR006665 OmpA-like domain LT40_RS19990 8e0fc9fc4ebb881aba104c4c3212b428 235 PANTHER PTHR30128 44 224 9.9E-55 T 23-04-2016 LT40_RS06405 74bfc842b9fab02ac0cafdef1d547dee 280 PANTHER PTHR10366:SF476 13 229 7.6E-49 T 23-04-2016 LT40_RS06405 74bfc842b9fab02ac0cafdef1d547dee 280 SUPERFAMILY SSF51735 13 251 1.41E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06405 74bfc842b9fab02ac0cafdef1d547dee 280 PANTHER PTHR10366 13 229 7.6E-49 T 23-04-2016 LT40_RS06405 74bfc842b9fab02ac0cafdef1d547dee 280 Gene3D G3DSA:3.40.50.720 13 205 7.3E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06405 74bfc842b9fab02ac0cafdef1d547dee 280 Pfam PF01370 NAD dependent epimerase/dehydratase family 15 179 1.1E-19 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 4.9E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 4.9E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 4.9E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 446 4.9E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 Pfam PF00672 HAMP domain 171 238 3.0E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 Gene3D G3DSA:3.30.565.10 331 495 1.6E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 328 2.5E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 SMART SM00304 190 242 3.2E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 SMART SM00388 264 329 3.0E-25 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 SUPERFAMILY SSF158472 190 238 1.29E-6 T 23-04-2016 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 Pfam PF00072 Response regulator receiver domain 518 629 1.4E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 36 98 5.1E-7 T 23-04-2016 IPR019247 Histidine kinase BarA, N-terminal LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 Gene3D G3DSA:3.40.50.2300 514 632 5.2E-40 T 23-04-2016 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 PANTHER PTHR24423 184 222 2.9E-146 T 23-04-2016 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 PANTHER PTHR24423 243 632 2.9E-146 T 23-04-2016 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 PANTHER PTHR24423 1 10 2.9E-146 T 23-04-2016 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 SMART SM00387 377 493 1.6E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 SUPERFAMILY SSF47384 249 328 1.55E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 SUPERFAMILY SSF55874 318 493 1.57E-43 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 492 1.3E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 SUPERFAMILY SSF52172 515 633 6.69E-38 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 SMART SM00448 516 629 4.9E-39 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS05940 7f2cbf0fffe95f579980f2a7ce29fd87 634 Gene3D G3DSA:1.10.287.130 256 325 1.2E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS05815 8d467bd80fffba868a599a18afb6abe0 251 Gene3D G3DSA:1.10.10.10 5 85 2.2E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05815 8d467bd80fffba868a599a18afb6abe0 251 Gene3D G3DSA:1.10.10.10 87 163 1.7E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05815 8d467bd80fffba868a599a18afb6abe0 251 PIRSF PIRSF019345 1 209 2.0E-75 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 LT40_RS05815 8d467bd80fffba868a599a18afb6abe0 251 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 10 174 2.9E-34 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 LT40_RS05815 8d467bd80fffba868a599a18afb6abe0 251 Pfam PF04079 Segregation and condensation complex subunit ScpB 13 172 6.9E-50 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 LT40_RS05815 8d467bd80fffba868a599a18afb6abe0 251 SUPERFAMILY SSF46785 87 163 1.2E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05815 8d467bd80fffba868a599a18afb6abe0 251 SUPERFAMILY SSF46785 5 86 6.8E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS05815 8d467bd80fffba868a599a18afb6abe0 251 PANTHER PTHR34298:SF2 1 210 2.2E-77 T 23-04-2016 LT40_RS05815 8d467bd80fffba868a599a18afb6abe0 251 PANTHER PTHR34298 1 210 2.2E-77 T 23-04-2016 LT40_RS17510 d6246494ec7cd4024b8c4231ed3a1233 176 Gene3D G3DSA:3.30.1380.20 6 144 4.7E-21 T 23-04-2016 LT40_RS17510 d6246494ec7cd4024b8c4231ed3a1233 176 SUPERFAMILY SSF111126 6 144 1.83E-16 T 23-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain LT40_RS17510 d6246494ec7cd4024b8c4231ed3a1233 176 SMART SM00989 107 175 2.2E-4 T 23-04-2016 IPR004096 4-vinyl reductase, 4VR LT40_RS12105 6d178cd5fbdfe249b6fde5696deff663 240 PANTHER PTHR23344 3 240 3.2E-63 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 LT40_RS12105 6d178cd5fbdfe249b6fde5696deff663 240 SUPERFAMILY SSF51695 2 237 2.09E-59 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LT40_RS12105 6d178cd5fbdfe249b6fde5696deff663 240 PANTHER PTHR23344:SF20 3 240 3.2E-63 T 23-04-2016 LT40_RS12105 6d178cd5fbdfe249b6fde5696deff663 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 231 4.4E-30 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 LT40_RS12105 6d178cd5fbdfe249b6fde5696deff663 240 Gene3D G3DSA:3.20.20.190 2 238 2.0E-58 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LT40_RS03720 59470396c4d08cc6ac1519c94cf1b1d4 485 Pfam PF10150 Ribonuclease E/G family 115 389 3.3E-104 T 23-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 LT40_RS03720 59470396c4d08cc6ac1519c94cf1b1d4 485 SMART SM00316 37 113 1.5E-8 T 23-04-2016 IPR022967 RNA-binding domain, S1 LT40_RS03720 59470396c4d08cc6ac1519c94cf1b1d4 485 Pfam PF00575 S1 RNA binding domain 38 100 2.5E-6 T 23-04-2016 IPR003029 S1 domain GO:0003676 LT40_RS03720 59470396c4d08cc6ac1519c94cf1b1d4 485 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 422 6.6E-157 T 23-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 LT40_RS03720 59470396c4d08cc6ac1519c94cf1b1d4 485 PANTHER PTHR30001 1 485 4.9E-209 T 23-04-2016 LT40_RS03720 59470396c4d08cc6ac1519c94cf1b1d4 485 Gene3D G3DSA:2.40.50.140 30 119 3.3E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS03720 59470396c4d08cc6ac1519c94cf1b1d4 485 SUPERFAMILY SSF50249 39 118 4.24E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS05400 6a900c2ab80c9dbe0dd6cecab56285e4 156 PRINTS PR01483 Fatty acid synthase signature 26 48 1.9E-6 T 23-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 LT40_RS05400 6a900c2ab80c9dbe0dd6cecab56285e4 156 PRINTS PR01483 Fatty acid synthase signature 48 69 1.9E-6 T 23-04-2016 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 LT40_RS05400 6a900c2ab80c9dbe0dd6cecab56285e4 156 Gene3D G3DSA:3.10.129.10 9 138 1.3E-45 T 23-04-2016 IPR029069 HotDog domain LT40_RS05400 6a900c2ab80c9dbe0dd6cecab56285e4 156 Pfam PF01575 MaoC like domain 17 115 7.3E-26 T 23-04-2016 IPR002539 MaoC-like domain LT40_RS05400 6a900c2ab80c9dbe0dd6cecab56285e4 156 SUPERFAMILY SSF54637 5 142 2.2E-41 T 23-04-2016 IPR029069 HotDog domain LT40_RS05400 6a900c2ab80c9dbe0dd6cecab56285e4 156 PANTHER PTHR13078 9 134 4.7E-39 T 23-04-2016 LT40_RS13750 4ba2dfca31c85723f60f55729610a826 253 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 245 42.964 T 23-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB LT40_RS13750 4ba2dfca31c85723f60f55729610a826 253 Pfam PF00588 SpoU rRNA Methylase family 98 238 3.0E-39 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LT40_RS13750 4ba2dfca31c85723f60f55729610a826 253 SUPERFAMILY SSF75217 70 245 2.35E-48 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases LT40_RS13750 4ba2dfca31c85723f60f55729610a826 253 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 80 8.8E-20 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LT40_RS13750 4ba2dfca31c85723f60f55729610a826 253 SMART SM00967 6 81 9.0E-20 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LT40_RS13750 4ba2dfca31c85723f60f55729610a826 253 Gene3D G3DSA:3.40.1280.10 93 247 3.9E-55 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LT40_RS13750 4ba2dfca31c85723f60f55729610a826 253 PANTHER PTHR12029 3 245 8.9E-77 T 23-04-2016 LT40_RS13750 4ba2dfca31c85723f60f55729610a826 253 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 244 5.3E-81 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 LT40_RS13750 4ba2dfca31c85723f60f55729610a826 253 Gene3D G3DSA:3.30.1330.30 1 77 1.4E-24 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like LT40_RS13750 4ba2dfca31c85723f60f55729610a826 253 SUPERFAMILY SSF55315 2 77 2.24E-17 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like LT40_RS09250 c947751b3cf660d7cac38b4a1668bab5 426 Gene3D G3DSA:3.40.50.2000 251 386 1.3E-17 T 23-04-2016 LT40_RS09250 c947751b3cf660d7cac38b4a1668bab5 426 SUPERFAMILY SSF53756 1 414 3.14E-59 T 23-04-2016 LT40_RS09250 c947751b3cf660d7cac38b4a1668bab5 426 Gene3D G3DSA:3.40.50.2000 4 250 8.0E-14 T 23-04-2016 LT40_RS09250 c947751b3cf660d7cac38b4a1668bab5 426 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 13 386 3.5E-13 T 23-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 LT40_RS00830 890d4500b6d9c34c751d6fa13c046822 381 PANTHER PTHR10566:SF94 91 239 1.1E-38 T 23-04-2016 LT40_RS00830 890d4500b6d9c34c751d6fa13c046822 381 Gene3D G3DSA:3.40.710.10 10 380 1.9E-84 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS00830 890d4500b6d9c34c751d6fa13c046822 381 SUPERFAMILY SSF56601 11 376 1.55E-76 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS00830 890d4500b6d9c34c751d6fa13c046822 381 PANTHER PTHR10566 91 239 1.1E-38 T 23-04-2016 LT40_RS00830 890d4500b6d9c34c751d6fa13c046822 381 Pfam PF00144 Beta-lactamase 18 362 9.6E-75 T 23-04-2016 IPR001466 Beta-lactamase-related LT40_RS19525 3d0d36e3e300a6324fcc3c5c9ee666bb 340 SUPERFAMILY SSF48452 33 120 1.14E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS19525 3d0d36e3e300a6324fcc3c5c9ee666bb 340 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 245 2.0E-83 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD LT40_RS19525 3d0d36e3e300a6324fcc3c5c9ee666bb 340 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 242 46.538 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD LT40_RS19525 3d0d36e3e300a6324fcc3c5c9ee666bb 340 Pfam PF13525 Outer membrane lipoprotein 30 233 1.7E-73 T 23-04-2016 LT40_RS19525 3d0d36e3e300a6324fcc3c5c9ee666bb 340 PANTHER PTHR37423 1 291 7.0E-106 T 23-04-2016 LT40_RS19195 6679fa451449f33b4e64cb15165131cd 274 PANTHER PTHR11732 1 274 4.5E-107 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS19195 6679fa451449f33b4e64cb15165131cd 274 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 38 55 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LT40_RS19195 6679fa451449f33b4e64cb15165131cd 274 Gene3D G3DSA:3.20.20.100 6 268 5.6E-80 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS19195 6679fa451449f33b4e64cb15165131cd 274 PIRSF PIRSF000097 1 273 6.4E-58 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS19195 6679fa451449f33b4e64cb15165131cd 274 SUPERFAMILY SSF51430 7 268 1.96E-76 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS19195 6679fa451449f33b4e64cb15165131cd 274 PRINTS PR00069 Aldo-keto reductase signature 122 139 1.2E-38 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS19195 6679fa451449f33b4e64cb15165131cd 274 PRINTS PR00069 Aldo-keto reductase signature 193 217 1.2E-38 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS19195 6679fa451449f33b4e64cb15165131cd 274 PRINTS PR00069 Aldo-keto reductase signature 34 58 1.2E-38 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS19195 6679fa451449f33b4e64cb15165131cd 274 PRINTS PR00069 Aldo-keto reductase signature 156 185 1.2E-38 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS19195 6679fa451449f33b4e64cb15165131cd 274 PRINTS PR00069 Aldo-keto reductase signature 90 108 1.2E-38 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS19195 6679fa451449f33b4e64cb15165131cd 274 Pfam PF00248 Aldo/keto reductase family 14 255 3.7E-40 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 PANTHER PTHR23501:SF1 12 470 1.5E-233 T 23-04-2016 LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 416 1.8E-73 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 Gene3D G3DSA:1.20.1250.20 262 464 1.6E-16 T 23-04-2016 LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 Gene3D G3DSA:1.20.1250.20 14 193 2.1E-29 T 23-04-2016 LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 Pfam PF07690 Major Facilitator Superfamily 19 410 3.2E-43 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 SUPERFAMILY SSF103473 7 201 4.58E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 SUPERFAMILY SSF103473 249 459 4.58E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 2.6E-9 T 23-04-2016 LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 401 420 2.6E-9 T 23-04-2016 LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 2.6E-9 T 23-04-2016 LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 2.6E-9 T 23-04-2016 LT40_RS17400 3d6813789f93015c07ec03fc6612c737 475 PANTHER PTHR23501 12 470 1.5E-233 T 23-04-2016 LT40_RS20615 76349abd250664b089caa36ac41e3537 241 PANTHER PTHR30251:SF3 27 238 1.3E-56 T 23-04-2016 LT40_RS20615 76349abd250664b089caa36ac41e3537 241 Gene3D G3DSA:2.60.40.1070 152 220 1.2E-6 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal LT40_RS20615 76349abd250664b089caa36ac41e3537 241 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 146 4.4E-20 T 23-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 LT40_RS20615 76349abd250664b089caa36ac41e3537 241 PANTHER PTHR30251 27 238 1.3E-56 T 23-04-2016 LT40_RS20615 76349abd250664b089caa36ac41e3537 241 SUPERFAMILY SSF49354 26 146 2.2E-21 T 23-04-2016 IPR008962 PapD-like LT40_RS20615 76349abd250664b089caa36ac41e3537 241 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 223 3.4E-5 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal LT40_RS20615 76349abd250664b089caa36ac41e3537 241 PRINTS PR00969 Pili chaperone signature 74 95 4.9E-9 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS20615 76349abd250664b089caa36ac41e3537 241 PRINTS PR00969 Pili chaperone signature 128 143 4.9E-9 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS20615 76349abd250664b089caa36ac41e3537 241 PRINTS PR00969 Pili chaperone signature 162 177 4.9E-9 T 23-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 LT40_RS20615 76349abd250664b089caa36ac41e3537 241 SUPERFAMILY SSF49584 150 230 1.44E-10 T 23-04-2016 IPR016148 Pili assembly chaperone, C-terminal LT40_RS20615 76349abd250664b089caa36ac41e3537 241 Gene3D G3DSA:2.60.40.360 30 147 1.7E-15 T 23-04-2016 IPR008962 PapD-like LT40_RS12050 ac5869a352a5099bd750ec43e10a24c0 309 Gene3D G3DSA:3.20.20.70 2 307 1.0E-120 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS12050 ac5869a352a5099bd750ec43e10a24c0 309 Pfam PF00923 Transaldolase 14 301 1.2E-96 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LT40_RS12050 ac5869a352a5099bd750ec43e10a24c0 309 SUPERFAMILY SSF51569 1 307 8.58E-107 T 23-04-2016 LT40_RS12050 ac5869a352a5099bd750ec43e10a24c0 309 TIGRFAM TIGR00874 talAB: transaldolase 4 308 4.6E-138 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LT40_RS12050 ac5869a352a5099bd750ec43e10a24c0 309 PANTHER PTHR10683 1 308 2.1E-163 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LT40_RS12050 ac5869a352a5099bd750ec43e10a24c0 309 PANTHER PTHR10683:SF18 1 308 2.1E-163 T 23-04-2016 LT40_RS12050 ac5869a352a5099bd750ec43e10a24c0 309 Hamap MF_00492 Transaldolase [tal]. 2 308 49.696 T 23-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LT40_RS12050 ac5869a352a5099bd750ec43e10a24c0 309 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LT40_RS12050 ac5869a352a5099bd750ec43e10a24c0 309 ProSitePatterns PS00958 Transaldolase active site. 122 139 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 LT40_RS20450 8b41948b3259a79139b8a4ac6fb9a9ad 225 SMART SM00260 73 217 3.9E-7 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS20450 8b41948b3259a79139b8a4ac6fb9a9ad 225 Pfam PF01584 CheW-like domain 78 217 8.8E-23 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS20450 8b41948b3259a79139b8a4ac6fb9a9ad 225 SUPERFAMILY SSF50341 75 217 2.88E-20 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS05875 2019d1fbee2739c62a4e8bf50273cd60 434 SUPERFAMILY SSF103473 35 427 4.84E-25 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS05875 2019d1fbee2739c62a4e8bf50273cd60 434 PANTHER PTHR10434 346 434 1.1E-42 T 23-04-2016 LT40_RS05875 2019d1fbee2739c62a4e8bf50273cd60 434 PANTHER PTHR10434:SF15 346 434 1.1E-42 T 23-04-2016 LT40_RS05875 2019d1fbee2739c62a4e8bf50273cd60 434 Gene3D G3DSA:1.20.1250.20 15 194 1.3E-5 T 23-04-2016 LT40_RS05875 2019d1fbee2739c62a4e8bf50273cd60 434 Gene3D G3DSA:1.20.1250.20 231 423 2.0E-10 T 23-04-2016 LT40_RS05875 2019d1fbee2739c62a4e8bf50273cd60 434 Pfam PF07690 Major Facilitator Superfamily 19 387 4.4E-15 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS09905 c618ad8b79f2b1b4fbc96b20faa8f666 120 Gene3D G3DSA:3.10.20.30 23 93 7.8E-6 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS09905 c618ad8b79f2b1b4fbc96b20faa8f666 120 SUPERFAMILY SSF54292 23 103 6.06E-19 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS09905 c618ad8b79f2b1b4fbc96b20faa8f666 120 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 21 101 2.4E-28 T 23-04-2016 LT40_RS19900 da31414efc764bcb3f277fd9e68baabe 212 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 2.2E-62 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS19900 da31414efc764bcb3f277fd9e68baabe 212 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 2.7E-88 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 LT40_RS19900 da31414efc764bcb3f277fd9e68baabe 212 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.183 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 LT40_RS19900 da31414efc764bcb3f277fd9e68baabe 212 PANTHER PTHR10285 8 197 6.0E-91 T 23-04-2016 LT40_RS19900 da31414efc764bcb3f277fd9e68baabe 212 SUPERFAMILY SSF53271 5 206 3.67E-65 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS19900 da31414efc764bcb3f277fd9e68baabe 212 Gene3D G3DSA:3.40.50.2020 7 208 1.1E-71 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS03865 2a0b9979d3b8b40ee392cc6a7dcbe627 347 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 LT40_RS03865 2a0b9979d3b8b40ee392cc6a7dcbe627 347 PANTHER PTHR11751 3 347 2.2E-117 T 23-04-2016 LT40_RS03865 2a0b9979d3b8b40ee392cc6a7dcbe627 347 Gene3D G3DSA:3.90.1150.10 254 347 6.0E-26 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS03865 2a0b9979d3b8b40ee392cc6a7dcbe627 347 Pfam PF00155 Aminotransferase class I and II 25 347 1.9E-56 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS03865 2a0b9979d3b8b40ee392cc6a7dcbe627 347 Gene3D G3DSA:3.40.640.10 38 253 5.8E-63 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS03865 2a0b9979d3b8b40ee392cc6a7dcbe627 347 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 347 55.739 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 LT40_RS03865 2a0b9979d3b8b40ee392cc6a7dcbe627 347 SUPERFAMILY SSF53383 5 347 3.09E-77 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS03865 2a0b9979d3b8b40ee392cc6a7dcbe627 347 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 347 1.7E-93 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 LT40_RS03865 2a0b9979d3b8b40ee392cc6a7dcbe627 347 PANTHER PTHR11751:SF398 3 347 2.2E-117 T 23-04-2016 LT40_RS12070 b47a5c5b1ac5d93da7562ed49ee8c1ed 233 PANTHER PTHR30035:SF3 29 232 4.6E-71 T 23-04-2016 LT40_RS12070 b47a5c5b1ac5d93da7562ed49ee8c1ed 233 Pfam PF04333 MlaA lipoprotein 33 222 7.9E-74 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS12070 b47a5c5b1ac5d93da7562ed49ee8c1ed 233 PRINTS PR01805 VacJ lipoprotein signature 102 119 2.6E-25 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS12070 b47a5c5b1ac5d93da7562ed49ee8c1ed 233 PRINTS PR01805 VacJ lipoprotein signature 51 67 2.6E-25 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS12070 b47a5c5b1ac5d93da7562ed49ee8c1ed 233 PRINTS PR01805 VacJ lipoprotein signature 138 155 2.6E-25 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS12070 b47a5c5b1ac5d93da7562ed49ee8c1ed 233 PRINTS PR01805 VacJ lipoprotein signature 34 47 2.6E-25 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS12070 b47a5c5b1ac5d93da7562ed49ee8c1ed 233 PANTHER PTHR30035 29 232 4.6E-71 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS10970 df5542fb92c0a7de056a91ceda20941f 433 SUPERFAMILY SSF103473 23 421 9.42E-28 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS10970 df5542fb92c0a7de056a91ceda20941f 433 PANTHER PTHR31187 5 415 1.0E-62 T 23-04-2016 IPR004667 ADP/ATP carrier protein GO:0005471|GO:0005524|GO:0006810|GO:0016021 LT40_RS10970 df5542fb92c0a7de056a91ceda20941f 433 Gene3D G3DSA:1.20.1250.20 26 193 5.1E-8 T 23-04-2016 LT40_RS10970 df5542fb92c0a7de056a91ceda20941f 433 Gene3D G3DSA:1.20.1250.20 239 417 3.9E-4 T 23-04-2016 LT40_RS10970 df5542fb92c0a7de056a91ceda20941f 433 Pfam PF07690 Major Facilitator Superfamily 27 255 3.5E-9 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 Gene3D G3DSA:1.10.287.950 293 511 4.2E-59 T 23-04-2016 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 SMART SM00283 279 540 3.5E-78 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 Pfam PF00672 HAMP domain 193 261 3.7E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 PANTHER PTHR32089:SF64 145 541 3.9E-127 T 23-04-2016 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 SMART SM00304 265 317 50.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 SMART SM00304 212 264 2.6E-10 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 67 82 8.2E-26 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 8.2E-26 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 188 208 8.2E-26 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 16 41 8.2E-26 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 8.2E-26 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 SUPERFAMILY SSF58104 232 541 5.49E-77 T 23-04-2016 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 185 2.5E-29 T 23-04-2016 IPR024478 4HB MCP domain LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 539 9.2E-49 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS17570 44a9fbbeb10202381757c2fe08b763aa 541 PANTHER PTHR32089 145 541 3.9E-127 T 23-04-2016 LT40_RS04265 a3c19ac84cc9178092f2528bbb6e2c02 251 SUPERFAMILY SSF55729 23 223 2.11E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS04265 a3c19ac84cc9178092f2528bbb6e2c02 251 Gene3D G3DSA:3.40.630.30 24 172 4.8E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS04265 a3c19ac84cc9178092f2528bbb6e2c02 251 PANTHER PTHR37323 1 251 5.6E-86 T 23-04-2016 LT40_RS04265 a3c19ac84cc9178092f2528bbb6e2c02 251 PANTHER PTHR37323:SF1 1 251 5.6E-86 T 23-04-2016 LT40_RS04265 a3c19ac84cc9178092f2528bbb6e2c02 251 Pfam PF13444 Acetyltransferase (GNAT) domain 33 133 1.4E-28 T 23-04-2016 LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 Gene3D G3DSA:1.10.10.10 5 84 1.5E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 Pfam PF03466 LysR substrate binding domain 87 284 4.5E-39 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 SUPERFAMILY SSF53850 87 286 2.06E-36 T 23-04-2016 LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 PANTHER PTHR30126:SF11 1 287 3.3E-65 T 23-04-2016 LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 SUPERFAMILY SSF46785 6 106 3.86E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 TIGRFAM TIGR03339 phn_lysR: aminoethylphosphonate catabolism associated LysR family transcriptional regulator 5 281 2.7E-119 T 23-04-2016 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 Gene3D G3DSA:3.40.190.10 172 255 3.2E-18 T 23-04-2016 LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 3.9E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 PANTHER PTHR30126 1 287 3.3E-65 T 23-04-2016 LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.2E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS18975 b1ce13e4186deaffd96e23dc008506b5 287 Gene3D G3DSA:3.40.190.10 89 171 1.8E-17 T 23-04-2016 LT40_RS13130 9f4ab36b22c1af23d03b92569b2a78b9 447 Gene3D G3DSA:1.20.1250.20 24 206 2.1E-18 T 23-04-2016 LT40_RS13130 9f4ab36b22c1af23d03b92569b2a78b9 447 Gene3D G3DSA:1.20.1250.20 233 417 8.1E-20 T 23-04-2016 LT40_RS13130 9f4ab36b22c1af23d03b92569b2a78b9 447 Pfam PF07690 Major Facilitator Superfamily 30 318 1.6E-18 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS13130 9f4ab36b22c1af23d03b92569b2a78b9 447 SUPERFAMILY SSF103473 21 418 2.62E-47 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS11935 4393d6197dd3b1126fce2f17fc6c9276 665 PANTHER PTHR30217 1 636 1.1E-225 T 23-04-2016 LT40_RS11935 4393d6197dd3b1126fce2f17fc6c9276 665 Pfam PF12392 Collagenase 399 512 1.5E-17 T 23-04-2016 IPR020988 Peptidase U32, collagenase KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS11935 4393d6197dd3b1126fce2f17fc6c9276 665 Pfam PF01136 Peptidase family U32 79 304 1.0E-67 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS11935 4393d6197dd3b1126fce2f17fc6c9276 665 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS11935 4393d6197dd3b1126fce2f17fc6c9276 665 PANTHER PTHR30217:SF10 1 636 1.1E-225 T 23-04-2016 LT40_RS07315 5e11dace4ce4e6deef6d3900596fba6d 235 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 2.0E-15 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS07315 5e11dace4ce4e6deef6d3900596fba6d 235 PANTHER PTHR30055 4 171 1.3E-44 T 23-04-2016 LT40_RS07315 5e11dace4ce4e6deef6d3900596fba6d 235 Gene3D G3DSA:1.10.357.10 3 208 1.1E-43 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LT40_RS07315 5e11dace4ce4e6deef6d3900596fba6d 235 PANTHER PTHR30055:SF73 4 171 1.3E-44 T 23-04-2016 LT40_RS07315 5e11dace4ce4e6deef6d3900596fba6d 235 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 23-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site LT40_RS07315 5e11dace4ce4e6deef6d3900596fba6d 235 SUPERFAMILY SSF46689 4 73 4.46E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS07315 5e11dace4ce4e6deef6d3900596fba6d 235 SUPERFAMILY SSF48498 82 208 5.04E-40 T 23-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LT40_RS07315 5e11dace4ce4e6deef6d3900596fba6d 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 3.5E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS07315 5e11dace4ce4e6deef6d3900596fba6d 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 3.5E-11 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LT40_RS13845 8df1e86304a04b2128156919e1c465dd 202 PANTHER PTHR30506 1 202 6.9E-116 T 23-04-2016 LT40_RS13845 8df1e86304a04b2128156919e1c465dd 202 PANTHER PTHR30506:SF2 1 202 6.9E-116 T 23-04-2016 LT40_RS13845 8df1e86304a04b2128156919e1c465dd 202 Pfam PF03458 UPF0126 domain 5 78 1.6E-20 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 LT40_RS13845 8df1e86304a04b2128156919e1c465dd 202 Pfam PF03458 UPF0126 domain 90 160 9.5E-22 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 PANTHER PTHR10742:SF255 24 480 2.5E-110 T 23-04-2016 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 Gene3D G3DSA:3.50.50.60 218 314 2.0E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 Gene3D G3DSA:3.50.50.60 28 100 2.0E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 Gene3D G3DSA:3.50.50.60 412 461 2.0E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 Pfam PF01593 Flavin containing amine oxidoreductase 37 452 5.0E-46 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 Gene3D G3DSA:1.10.405.10 126 200 2.2E-5 T 23-04-2016 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 PANTHER PTHR10742 24 480 2.5E-110 T 23-04-2016 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 SUPERFAMILY SSF54373 297 401 2.28E-16 T 23-04-2016 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 PRINTS PR00757 Flavin-containing amine oxidase signature 434 451 1.7E-8 T 23-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 PRINTS PR00757 Flavin-containing amine oxidase signature 403 425 1.7E-8 T 23-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 PRINTS PR00757 Flavin-containing amine oxidase signature 29 48 1.7E-8 T 23-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 SUPERFAMILY SSF51905 413 454 4.53E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS14850 f9dcc5206734e459d7ba9b6ee2da0f41 585 SUPERFAMILY SSF51905 26 316 4.53E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16365 c9e61ab9b492920c1786b0b30b9fd858 556 Gene3D G3DSA:1.10.3720.10 283 552 8.3E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16365 c9e61ab9b492920c1786b0b30b9fd858 556 Gene3D G3DSA:1.10.3720.10 29 48 8.3E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16365 c9e61ab9b492920c1786b0b30b9fd858 556 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 285 548 1.0E-74 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 LT40_RS16365 c9e61ab9b492920c1786b0b30b9fd858 556 PANTHER PTHR30425 196 554 1.3E-245 T 23-04-2016 LT40_RS16365 c9e61ab9b492920c1786b0b30b9fd858 556 PANTHER PTHR30425:SF7 196 554 1.3E-245 T 23-04-2016 LT40_RS16365 c9e61ab9b492920c1786b0b30b9fd858 556 SUPERFAMILY SSF161098 284 538 1.57E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16365 c9e61ab9b492920c1786b0b30b9fd858 556 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 324 550 1.3E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16415 ef54b62f48a2bb6e8dc025877600c414 168 PANTHER PTHR38683 6 166 1.4E-45 T 23-04-2016 LT40_RS16415 ef54b62f48a2bb6e8dc025877600c414 168 Pfam PF04345 Chorismate lyase 5 161 2.9E-50 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 LT40_RS16415 ef54b62f48a2bb6e8dc025877600c414 168 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 2 160 25.093 T 23-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 LT40_RS16415 ef54b62f48a2bb6e8dc025877600c414 168 Gene3D G3DSA:3.40.1410.10 5 158 1.5E-48 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LT40_RS16415 ef54b62f48a2bb6e8dc025877600c414 168 SUPERFAMILY SSF64288 5 158 7.85E-46 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LT40_RS06155 65ab46921d2d847160b3d9564619c15c 369 Pfam PF00155 Aminotransferase class I and II 38 361 1.3E-49 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS06155 65ab46921d2d847160b3d9564619c15c 369 PANTHER PTHR11751:SF347 23 369 9.1E-108 T 23-04-2016 LT40_RS06155 65ab46921d2d847160b3d9564619c15c 369 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 366 62.317 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 LT40_RS06155 65ab46921d2d847160b3d9564619c15c 369 SUPERFAMILY SSF53383 17 366 1.35E-78 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS06155 65ab46921d2d847160b3d9564619c15c 369 Gene3D G3DSA:3.90.1150.10 269 366 1.2E-20 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS06155 65ab46921d2d847160b3d9564619c15c 369 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 226 235 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 LT40_RS06155 65ab46921d2d847160b3d9564619c15c 369 PANTHER PTHR11751 23 369 9.1E-108 T 23-04-2016 LT40_RS06155 65ab46921d2d847160b3d9564619c15c 369 Gene3D G3DSA:3.40.640.10 51 268 2.4E-64 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS06155 65ab46921d2d847160b3d9564619c15c 369 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 365 1.8E-111 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 LT40_RS05650 961292a452652f1dd4fad56ce5d8f5b4 246 PANTHER PTHR10285 32 236 9.6E-65 T 23-04-2016 LT40_RS05650 961292a452652f1dd4fad56ce5d8f5b4 246 PANTHER PTHR10285:SF7 32 236 9.6E-65 T 23-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 LT40_RS05650 961292a452652f1dd4fad56ce5d8f5b4 246 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 39 166 1.3E-7 T 23-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 LT40_RS05650 961292a452652f1dd4fad56ce5d8f5b4 246 SUPERFAMILY SSF52540 24 235 3.36E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05650 961292a452652f1dd4fad56ce5d8f5b4 246 Gene3D G3DSA:3.40.50.300 31 235 9.0E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19330 d0022b11b99efe5f4855139a72286ac8 688 PANTHER PTHR30252 9 688 0.0 T 23-04-2016 LT40_RS19330 d0022b11b99efe5f4855139a72286ac8 688 PANTHER PTHR30252:SF3 9 688 0.0 T 23-04-2016 LT40_RS19330 d0022b11b99efe5f4855139a72286ac8 688 Pfam PF02554 Carbon starvation protein CstA 35 411 1.7E-168 T 23-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 LT40_RS19330 d0022b11b99efe5f4855139a72286ac8 688 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 466 594 1.1E-35 T 23-04-2016 IPR025299 CstA, C-terminal domain LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 Gene3D G3DSA:1.10.287.70 23 231 1.0E-50 T 23-04-2016 LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 PRINTS PR00169 Potassium channel signature 176 198 2.5E-30 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 PRINTS PR00169 Potassium channel signature 205 231 2.5E-30 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 PRINTS PR00169 Potassium channel signature 82 102 2.5E-30 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 PRINTS PR00169 Potassium channel signature 147 170 2.5E-30 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 PRINTS PR00169 Potassium channel signature 14 42 2.5E-30 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 PRINTS PR00169 Potassium channel signature 118 144 2.5E-30 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 PRINTS PR00169 Potassium channel signature 56 79 2.5E-30 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 Pfam PF00520 Ion transport protein 23 233 1.2E-26 T 23-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 SUPERFAMILY SSF81324 20 231 1.14E-50 T 23-04-2016 LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 PANTHER PTHR11537 3 265 6.5E-99 T 23-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 LT40_RS02635 e564d04a9c6da8e5b837839e4605939a 271 PANTHER PTHR11537:SF137 3 265 6.5E-99 T 23-04-2016 LT40_RS19060 ff206027a6398ca23741523ae25f84e7 363 PANTHER PTHR34296 9 356 3.7E-89 T 23-04-2016 LT40_RS19060 ff206027a6398ca23741523ae25f84e7 363 Pfam PF02608 Basic membrane protein 34 296 4.4E-43 T 23-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 LT40_RS19060 ff206027a6398ca23741523ae25f84e7 363 Gene3D G3DSA:3.40.50.2300 152 295 2.1E-35 T 23-04-2016 LT40_RS19060 ff206027a6398ca23741523ae25f84e7 363 Gene3D G3DSA:3.40.50.2300 32 151 2.7E-37 T 23-04-2016 LT40_RS19060 ff206027a6398ca23741523ae25f84e7 363 PANTHER PTHR34296:SF1 9 356 3.7E-89 T 23-04-2016 LT40_RS07090 9b8e1ad0785c22370d6bed9ee969f65e 417 SUPERFAMILY SSF52540 16 293 3.96E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07090 9b8e1ad0785c22370d6bed9ee969f65e 417 Gene3D G3DSA:3.40.50.300 15 214 1.5E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07090 9b8e1ad0785c22370d6bed9ee969f65e 417 Pfam PF13401 AAA domain 38 197 1.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 9.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 9.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 9.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 290 305 9.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 9.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 9.9E-25 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 Gene3D G3DSA:1.10.730.10 379 534 3.9E-39 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 Gene3D G3DSA:3.40.50.620 5 143 5.5E-86 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 Gene3D G3DSA:3.40.50.620 182 378 5.5E-86 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 Gene3D G3DSA:2.20.28.20 144 175 3.3E-18 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 SUPERFAMILY SSF52374 4 140 1.83E-100 T 23-04-2016 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 SUPERFAMILY SSF52374 175 386 1.83E-100 T 23-04-2016 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 Pfam PF09334 tRNA synthetases class I (M) 7 395 1.4E-155 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 Pfam PF01588 Putative tRNA binding domain 587 680 3.9E-23 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 545 39.143 T 23-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 SUPERFAMILY SSF47323 389 545 1.42E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 SUPERFAMILY SSF57770 141 175 8.11E-12 T 23-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 PANTHER PTHR11946:SF86 1 638 1.6E-236 T 23-04-2016 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 PANTHER PTHR11946 1 638 1.6E-236 T 23-04-2016 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 SUPERFAMILY SSF50249 576 682 7.83E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 534 1.0E-174 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 Gene3D G3DSA:2.40.50.140 574 683 6.7E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS05390 38dcdd03aa8170ae7ad088142c02cf0b 683 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 563 683 4.7E-42 T 23-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LT40_RS00725 176c452a6dc338e9fcf9f8bf4f3a1386 271 PANTHER PTHR11825 18 262 9.0E-66 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LT40_RS00725 176c452a6dc338e9fcf9f8bf4f3a1386 271 PANTHER PTHR11825:SF55 18 262 9.0E-66 T 23-04-2016 LT40_RS00725 176c452a6dc338e9fcf9f8bf4f3a1386 271 SUPERFAMILY SSF56752 3 262 1.11E-67 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LT40_RS00725 176c452a6dc338e9fcf9f8bf4f3a1386 271 Gene3D G3DSA:3.30.470.10 3 104 6.5E-25 T 23-04-2016 LT40_RS00725 176c452a6dc338e9fcf9f8bf4f3a1386 271 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 4 262 2.5E-84 T 23-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 LT40_RS00725 176c452a6dc338e9fcf9f8bf4f3a1386 271 Pfam PF01063 Amino-transferase class IV 25 246 4.9E-45 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LT40_RS00725 176c452a6dc338e9fcf9f8bf4f3a1386 271 Gene3D G3DSA:3.20.10.10 125 261 2.2E-41 T 23-04-2016 LT40_RS03905 d180e05a422a122a8aca43a5989804de 209 PANTHER PTHR12277 17 203 8.1E-58 T 23-04-2016 LT40_RS03905 d180e05a422a122a8aca43a5989804de 209 SUPERFAMILY SSF53474 5 200 1.58E-37 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS03905 d180e05a422a122a8aca43a5989804de 209 Gene3D G3DSA:3.40.50.1820 11 204 2.6E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS03905 d180e05a422a122a8aca43a5989804de 209 PANTHER PTHR12277:SF79 17 203 8.1E-58 T 23-04-2016 LT40_RS03905 d180e05a422a122a8aca43a5989804de 209 Pfam PF00975 Thioesterase domain 89 137 7.0E-10 T 23-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 LT40_RS09930 e84d2d0ac0f035f7563cab9c9c3690d6 350 Pfam PF13416 Bacterial extracellular solute-binding protein 49 313 3.8E-33 T 23-04-2016 LT40_RS09930 e84d2d0ac0f035f7563cab9c9c3690d6 350 Gene3D G3DSA:3.40.190.10 12 130 1.2E-22 T 23-04-2016 LT40_RS09930 e84d2d0ac0f035f7563cab9c9c3690d6 350 Gene3D G3DSA:3.40.190.10 277 341 1.2E-22 T 23-04-2016 LT40_RS09930 e84d2d0ac0f035f7563cab9c9c3690d6 350 SUPERFAMILY SSF53850 32 347 7.83E-62 T 23-04-2016 LT40_RS09930 e84d2d0ac0f035f7563cab9c9c3690d6 350 PANTHER PTHR30006:SF7 8 350 3.2E-90 T 23-04-2016 LT40_RS09930 e84d2d0ac0f035f7563cab9c9c3690d6 350 PANTHER PTHR30006 8 350 3.2E-90 T 23-04-2016 LT40_RS09930 e84d2d0ac0f035f7563cab9c9c3690d6 350 Gene3D G3DSA:3.40.190.10 133 276 4.2E-32 T 23-04-2016 LT40_RS06570 9d02fecf9ec532b23b32d0e90c2817c7 306 PANTHER PTHR38103 2 305 3.0E-149 T 23-04-2016 LT40_RS06570 9d02fecf9ec532b23b32d0e90c2817c7 306 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 302 42.445 T 23-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 LT40_RS06570 9d02fecf9ec532b23b32d0e90c2817c7 306 PANTHER PTHR38103:SF1 2 305 3.0E-149 T 23-04-2016 LT40_RS06570 9d02fecf9ec532b23b32d0e90c2817c7 306 Pfam PF04381 Putative exonuclease, RdgC 1 300 2.0E-114 T 23-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 LT40_RS20070 5c57ccafc72e8cd3c8574c1fc4abad6d 188 SUPERFAMILY SSF54909 3 102 1.43E-18 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS20070 5c57ccafc72e8cd3c8574c1fc4abad6d 188 PANTHER PTHR40057 1 180 1.5E-52 T 23-04-2016 LT40_RS20070 5c57ccafc72e8cd3c8574c1fc4abad6d 188 Gene3D G3DSA:3.30.70.900 6 95 9.7E-14 T 23-04-2016 LT40_RS20070 5c57ccafc72e8cd3c8574c1fc4abad6d 188 PANTHER PTHR40057:SF1 1 180 1.5E-52 T 23-04-2016 LT40_RS13490 b466c9a148a02d4525177ce6cf383e01 567 SUPERFAMILY SSF159672 4 214 7.06E-41 T 23-04-2016 LT40_RS13490 b466c9a148a02d4525177ce6cf383e01 567 PANTHER PTHR21091 283 498 1.7E-34 T 23-04-2016 LT40_RS13490 b466c9a148a02d4525177ce6cf383e01 567 Gene3D G3DSA:3.40.1010.10 315 430 1.0E-26 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LT40_RS13490 b466c9a148a02d4525177ce6cf383e01 567 PANTHER PTHR21091:SF9 1 19 1.7E-34 T 23-04-2016 LT40_RS13490 b466c9a148a02d4525177ce6cf383e01 567 PANTHER PTHR21091:SF9 283 498 1.7E-34 T 23-04-2016 LT40_RS13490 b466c9a148a02d4525177ce6cf383e01 567 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 317 563 4.6E-84 T 23-04-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 LT40_RS13490 b466c9a148a02d4525177ce6cf383e01 567 Gene3D G3DSA:3.30.950.10 431 544 5.3E-10 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 LT40_RS13490 b466c9a148a02d4525177ce6cf383e01 567 PANTHER PTHR21091 1 19 1.7E-34 T 23-04-2016 LT40_RS13490 b466c9a148a02d4525177ce6cf383e01 567 SUPERFAMILY SSF53790 314 564 5.5E-48 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS13490 b466c9a148a02d4525177ce6cf383e01 567 Pfam PF11760 Cobalamin synthesis G N-terminal 53 131 2.6E-21 T 23-04-2016 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 LT40_RS13490 b466c9a148a02d4525177ce6cf383e01 567 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 316 527 5.2E-31 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS03900 06b0faba4ce1eb3b0f0d4562b33ac1ff 145 Pfam PF06295 Protein of unknown function (DUF1043) 13 129 9.5E-21 T 23-04-2016 IPR009386 Protein of unknown function DUF1043 LT40_RS03900 06b0faba4ce1eb3b0f0d4562b33ac1ff 145 PANTHER PTHR39579 2 145 4.2E-39 T 23-04-2016 LT40_RS03900 06b0faba4ce1eb3b0f0d4562b33ac1ff 145 PIRSF PIRSF006318 2 144 1.4E-36 T 23-04-2016 IPR009386 Protein of unknown function DUF1043 LT40_RS12330 bc1e24afc03eaa3e6767b3f4d5c2327c 203 PANTHER PTHR30462:SF3 4 198 1.7E-20 T 23-04-2016 LT40_RS12330 bc1e24afc03eaa3e6767b3f4d5c2327c 203 Pfam PF04403 Paraquat-inducible protein A 46 198 8.7E-43 T 23-04-2016 IPR007498 Paraquat-inducible protein A LT40_RS12330 bc1e24afc03eaa3e6767b3f4d5c2327c 203 PANTHER PTHR30462 4 198 1.7E-20 T 23-04-2016 LT40_RS15465 06c4dc183cd71ced31505e9e0a6ae31f 69 Pfam PF07869 Protein of unknown function (DUF1656) 4 59 3.6E-21 T 23-04-2016 IPR012451 Protein of unknown function DUF1656 LT40_RS13180 4a86ff49975d1520af8427942dec9353 508 PANTHER PTHR11699:SF181 12 507 0.0 T 23-04-2016 LT40_RS13180 4a86ff49975d1520af8427942dec9353 508 Gene3D G3DSA:3.40.605.10 15 271 1.5E-100 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS13180 4a86ff49975d1520af8427942dec9353 508 SUPERFAMILY SSF53720 13 493 5.24E-150 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS13180 4a86ff49975d1520af8427942dec9353 508 Pfam PF00171 Aldehyde dehydrogenase family 23 487 3.6E-143 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS13180 4a86ff49975d1520af8427942dec9353 508 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS13180 4a86ff49975d1520af8427942dec9353 508 Gene3D G3DSA:3.40.309.10 272 452 2.0E-66 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS13180 4a86ff49975d1520af8427942dec9353 508 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 15 491 4.2E-226 T 23-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 LT40_RS13180 4a86ff49975d1520af8427942dec9353 508 PANTHER PTHR11699 12 507 0.0 T 23-04-2016 LT40_RS02480 3f14eb20302a897671caa75cea6f0da4 261 PANTHER PTHR30065:SF1 5 259 2.3E-83 T 23-04-2016 LT40_RS02480 3f14eb20302a897671caa75cea6f0da4 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 183 205 4.0E-27 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LT40_RS02480 3f14eb20302a897671caa75cea6f0da4 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 25 46 4.0E-27 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LT40_RS02480 3f14eb20302a897671caa75cea6f0da4 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 205 224 4.0E-27 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LT40_RS02480 3f14eb20302a897671caa75cea6f0da4 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 84 103 4.0E-27 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LT40_RS02480 3f14eb20302a897671caa75cea6f0da4 261 PANTHER PTHR30065 5 259 2.3E-83 T 23-04-2016 LT40_RS02480 3f14eb20302a897671caa75cea6f0da4 261 Pfam PF01311 Bacterial export proteins, family 1 17 246 4.4E-66 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 LT40_RS02480 3f14eb20302a897671caa75cea6f0da4 261 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 16 257 2.8E-73 T 23-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 LT40_RS15650 e1c4a95f0fbdb651f6dbd99084a929e1 281 PANTHER PTHR34606:SF3 22 276 2.1E-45 T 23-04-2016 LT40_RS15650 e1c4a95f0fbdb651f6dbd99084a929e1 281 SMART SM00749 126 187 4.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LT40_RS15650 e1c4a95f0fbdb651f6dbd99084a929e1 281 SMART SM00749 41 104 79.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LT40_RS15650 e1c4a95f0fbdb651f6dbd99084a929e1 281 SMART SM00749 214 277 1.7E-7 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LT40_RS15650 e1c4a95f0fbdb651f6dbd99084a929e1 281 PANTHER PTHR34606 22 276 2.1E-45 T 23-04-2016 LT40_RS15650 e1c4a95f0fbdb651f6dbd99084a929e1 281 Pfam PF04972 BON domain 209 276 4.0E-17 T 23-04-2016 IPR007055 BON domain LT40_RS15650 e1c4a95f0fbdb651f6dbd99084a929e1 281 Pfam PF04972 BON domain 42 104 4.5E-12 T 23-04-2016 IPR007055 BON domain LT40_RS15650 e1c4a95f0fbdb651f6dbd99084a929e1 281 Pfam PF04972 BON domain 122 187 6.2E-15 T 23-04-2016 IPR007055 BON domain LT40_RS02685 de9aef0de67306905e796f714872fd2a 182 SUPERFAMILY SSF53271 6 177 3.93E-47 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS02685 de9aef0de67306905e796f714872fd2a 182 Pfam PF00156 Phosphoribosyl transferase domain 47 158 2.9E-12 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 LT40_RS02685 de9aef0de67306905e796f714872fd2a 182 PANTHER PTHR11776 11 177 1.7E-62 T 23-04-2016 LT40_RS02685 de9aef0de67306905e796f714872fd2a 182 PANTHER PTHR11776:SF0 11 177 1.7E-62 T 23-04-2016 LT40_RS02685 de9aef0de67306905e796f714872fd2a 182 Gene3D G3DSA:3.40.50.2020 9 176 2.2E-56 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like LT40_RS02685 de9aef0de67306905e796f714872fd2a 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 8 177 33.498 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 LT40_RS02685 de9aef0de67306905e796f714872fd2a 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 175 2.0E-56 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 LT40_RS09205 337a0b75f97f30c2ee93be4def56d493 370 Pfam PF00534 Glycosyl transferases group 1 194 345 2.6E-32 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS09205 337a0b75f97f30c2ee93be4def56d493 370 Pfam PF13439 Glycosyltransferase Family 4 15 173 7.2E-19 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LT40_RS09205 337a0b75f97f30c2ee93be4def56d493 370 SUPERFAMILY SSF53756 2 368 2.41E-75 T 23-04-2016 LT40_RS09205 337a0b75f97f30c2ee93be4def56d493 370 Gene3D G3DSA:3.40.50.2000 161 345 6.6E-26 T 23-04-2016 LT40_RS09205 337a0b75f97f30c2ee93be4def56d493 370 PANTHER PTHR12526 1 370 1.2E-63 T 23-04-2016 LT40_RS20655 613347c4c743eef553bf4c9526913483 281 SUPERFAMILY SSF52540 9 250 5.12E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20655 613347c4c743eef553bf4c9526913483 281 Gene3D G3DSA:3.40.50.300 8 200 2.7E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20655 613347c4c743eef553bf4c9526913483 281 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 173 2.4E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS20655 613347c4c743eef553bf4c9526913483 281 PANTHER PTHR22908 1 235 1.1E-76 T 23-04-2016 LT40_RS20655 613347c4c743eef553bf4c9526913483 281 SMART SM00382 25 184 1.9E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS12405 c209ce19c7b4efe1cd6e216226795c7b 391 SUPERFAMILY SSF51905 1 177 1.8E-16 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12405 c209ce19c7b4efe1cd6e216226795c7b 391 TIGRFAM TIGR01790 carotene-cycl: lycopene cyclase family protein 4 371 2.5E-99 T 23-04-2016 IPR010108 Lycopene cyclase, beta/epsilon GO:0016117|GO:0016705 LT40_RS12405 c209ce19c7b4efe1cd6e216226795c7b 391 TIGRFAM TIGR01789 lycopene_cycl: lycopene cyclase 4 372 5.3E-151 T 23-04-2016 IPR008461 Lycopene cyclase GO:0016117|GO:0045436 LT40_RS12405 c209ce19c7b4efe1cd6e216226795c7b 391 Gene3D G3DSA:3.50.50.60 2 186 1.0E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12405 c209ce19c7b4efe1cd6e216226795c7b 391 Pfam PF05834 Lycopene cyclase protein 4 371 1.6E-89 T 23-04-2016 LT40_RS13980 8203bebecbdef91c2cbf76069239567f 150 Pfam PF06853 Protein of unknown function (DUF1249) 27 145 1.3E-42 T 23-04-2016 IPR009659 Protein of unknown function DUF1249 LT40_RS13980 8203bebecbdef91c2cbf76069239567f 150 PANTHER PTHR38774:SF1 2 150 3.1E-46 T 23-04-2016 LT40_RS13980 8203bebecbdef91c2cbf76069239567f 150 PANTHER PTHR38774 2 150 3.1E-46 T 23-04-2016 LT40_RS11570 bd55ed2fac6b67c4335ad894bf4f26f8 456 PANTHER PTHR23508 20 447 3.9E-202 T 23-04-2016 LT40_RS11570 bd55ed2fac6b67c4335ad894bf4f26f8 456 Gene3D G3DSA:1.20.1250.20 22 226 3.8E-21 T 23-04-2016 LT40_RS11570 bd55ed2fac6b67c4335ad894bf4f26f8 456 Gene3D G3DSA:1.20.1250.20 242 428 2.0E-14 T 23-04-2016 LT40_RS11570 bd55ed2fac6b67c4335ad894bf4f26f8 456 PANTHER PTHR23508:SF12 20 447 3.9E-202 T 23-04-2016 LT40_RS11570 bd55ed2fac6b67c4335ad894bf4f26f8 456 Pfam PF00083 Sugar (and other) transporter 27 221 5.0E-24 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS11570 bd55ed2fac6b67c4335ad894bf4f26f8 456 SUPERFAMILY SSF103473 18 425 3.53E-59 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS11570 bd55ed2fac6b67c4335ad894bf4f26f8 456 Pfam PF07690 Major Facilitator Superfamily 275 422 2.7E-8 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS11885 a99285af0c921e35d67e30ae54e175e6 717 Gene3D G3DSA:2.40.170.20 169 716 8.6E-71 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS11885 a99285af0c921e35d67e30ae54e175e6 717 Gene3D G3DSA:2.170.130.10 26 168 2.6E-22 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS11885 a99285af0c921e35d67e30ae54e175e6 717 SUPERFAMILY SSF56935 27 716 4.27E-90 T 23-04-2016 LT40_RS11885 a99285af0c921e35d67e30ae54e175e6 717 PANTHER PTHR32552 4 716 2.0E-34 T 23-04-2016 LT40_RS11885 a99285af0c921e35d67e30ae54e175e6 717 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 166 1.5E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 LT40_RS11885 a99285af0c921e35d67e30ae54e175e6 717 Pfam PF00593 TonB dependent receptor 452 714 1.3E-29 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 SMART SM00345 28 86 5.1E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 86 9.4E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 SUPERFAMILY SSF48008 93 225 2.88E-20 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 SMART SM00895 96 220 9.4E-18 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 PANTHER PTHR11751:SF384 18 112 2.5E-31 T 23-04-2016 LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 Pfam PF07729 FCD domain 96 219 3.5E-24 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 60 3.0E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 60 76 3.0E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 Gene3D G3DSA:1.20.120.530 90 228 4.7E-24 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 SUPERFAMILY SSF46785 18 90 2.81E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 Gene3D G3DSA:1.10.10.10 10 87 5.5E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09965 c6fc26910f11a82116acf892e8a43f69 235 PANTHER PTHR11751 18 112 2.5E-31 T 23-04-2016 LT40_RS17100 ea5eee2bc09b25ae3d01ed794f96a6b1 249 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS17100 ea5eee2bc09b25ae3d01ed794f96a6b1 249 SUPERFAMILY SSF52540 1 240 8.17E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17100 ea5eee2bc09b25ae3d01ed794f96a6b1 249 Pfam PF00005 ABC transporter 17 170 1.3E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS17100 ea5eee2bc09b25ae3d01ed794f96a6b1 249 PANTHER PTHR24220 3 245 1.4E-136 T 23-04-2016 LT40_RS17100 ea5eee2bc09b25ae3d01ed794f96a6b1 249 PIRSF PIRSF039085 1 246 5.2E-111 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS17100 ea5eee2bc09b25ae3d01ed794f96a6b1 249 SMART SM00382 26 218 2.0E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS17100 ea5eee2bc09b25ae3d01ed794f96a6b1 249 PANTHER PTHR24220:SF327 3 245 1.4E-136 T 23-04-2016 LT40_RS17100 ea5eee2bc09b25ae3d01ed794f96a6b1 249 Gene3D G3DSA:3.40.50.300 1 242 3.8E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09605 d54400287b39e654e68e6213a092d0fe 339 SUPERFAMILY SSF56752 4 336 1.57E-102 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LT40_RS09605 d54400287b39e654e68e6213a092d0fe 339 PIRSF PIRSF006468 1 339 2.0E-118 T 23-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 LT40_RS09605 d54400287b39e654e68e6213a092d0fe 339 PANTHER PTHR11825:SF2 4 338 1.8E-155 T 23-04-2016 LT40_RS09605 d54400287b39e654e68e6213a092d0fe 339 Gene3D G3DSA:3.30.470.10 4 161 8.0E-64 T 23-04-2016 LT40_RS09605 d54400287b39e654e68e6213a092d0fe 339 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 31 339 2.3E-138 T 23-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 LT40_RS09605 d54400287b39e654e68e6213a092d0fe 339 Pfam PF01063 Amino-transferase class IV 56 293 3.5E-38 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LT40_RS09605 d54400287b39e654e68e6213a092d0fe 339 Gene3D G3DSA:3.20.10.10 162 325 6.5E-57 T 23-04-2016 LT40_RS09605 d54400287b39e654e68e6213a092d0fe 339 ProSitePatterns PS00770 Aminotransferases class-IV signature. 220 249 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 LT40_RS09605 d54400287b39e654e68e6213a092d0fe 339 PANTHER PTHR11825 4 338 1.8E-155 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 LT40_RS17080 2b81d73fdba011b4c96268a880e8b71a 464 SUPERFAMILY SSF55103 190 462 1.32E-57 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LT40_RS17080 2b81d73fdba011b4c96268a880e8b71a 464 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 461 1.1E-58 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 LT40_RS17080 2b81d73fdba011b4c96268a880e8b71a 464 PANTHER PTHR11748:SF76 1 464 7.1E-227 T 23-04-2016 LT40_RS17080 2b81d73fdba011b4c96268a880e8b71a 464 SUPERFAMILY SSF56176 5 217 2.94E-67 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS17080 2b81d73fdba011b4c96268a880e8b71a 464 Gene3D G3DSA:1.10.45.10 422 461 2.3E-13 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 LT40_RS17080 2b81d73fdba011b4c96268a880e8b71a 464 Pfam PF01565 FAD binding domain 41 179 1.5E-37 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LT40_RS17080 2b81d73fdba011b4c96268a880e8b71a 464 Gene3D G3DSA:3.30.43.10 2 95 2.9E-30 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LT40_RS17080 2b81d73fdba011b4c96268a880e8b71a 464 Gene3D G3DSA:3.30.465.10 96 217 7.9E-39 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS17080 2b81d73fdba011b4c96268a880e8b71a 464 PANTHER PTHR11748 1 464 7.1E-227 T 23-04-2016 LT40_RS10000 95b24b68bd97c0ef3cc24e7769113f7f 427 SUPERFAMILY SSF51905 30 253 6.91E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10000 95b24b68bd97c0ef3cc24e7769113f7f 427 SUPERFAMILY SSF51905 345 407 6.91E-44 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10000 95b24b68bd97c0ef3cc24e7769113f7f 427 Pfam PF01266 FAD dependent oxidoreductase 31 381 8.7E-51 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS10000 95b24b68bd97c0ef3cc24e7769113f7f 427 PANTHER PTHR13847 1 424 1.7E-235 T 23-04-2016 LT40_RS10000 95b24b68bd97c0ef3cc24e7769113f7f 427 Gene3D G3DSA:3.50.50.60 345 401 3.1E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10000 95b24b68bd97c0ef3cc24e7769113f7f 427 Gene3D G3DSA:3.50.50.60 17 120 3.1E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10000 95b24b68bd97c0ef3cc24e7769113f7f 427 Gene3D G3DSA:3.50.50.60 173 252 3.1E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10000 95b24b68bd97c0ef3cc24e7769113f7f 427 PANTHER PTHR13847:SF210 1 424 1.7E-235 T 23-04-2016 LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 SUPERFAMILY SSF51126 45 299 2.35E-35 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 SMART SM00912 51 176 5.4E-22 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 69 155 3.7E-11 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 Pfam PF05594 Haemagluttinin repeat 233 329 4.3E-6 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 Pfam PF05594 Haemagluttinin repeat 764 802 55.0 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 Pfam PF05594 Haemagluttinin repeat 194 225 190.0 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 Pfam PF05594 Haemagluttinin repeat 694 731 60.0 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 Pfam PF05594 Haemagluttinin repeat 607 652 3.9 T 23-04-2016 IPR008619 Filamentous haemagglutinin repeat LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 PANTHER PTHR32093 19 155 1.3E-23 T 23-04-2016 LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 Pfam PF13332 Haemagluttinin repeat 509 574 6.4E-4 T 23-04-2016 IPR025157 Haemagluttinin repeat LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 Gene3D G3DSA:2.160.20.10 46 327 3.4E-50 T 23-04-2016 IPR012334 Pectin lyase fold LT40_RS09970 e32278de3beda6e9a7a63f84e640e0a0 885 Pfam PF05860 haemagglutination activity domain 50 172 1.3E-22 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal LT40_RS06410 1310b725c04367934cc88b97385a98b4 255 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 7 252 6.6E-73 T 23-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 LT40_RS06410 1310b725c04367934cc88b97385a98b4 255 PANTHER PTHR30043:SF1 2 255 1.9E-82 T 23-04-2016 LT40_RS06410 1310b725c04367934cc88b97385a98b4 255 SUPERFAMILY SSF161098 62 243 3.92E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS06410 1310b725c04367934cc88b97385a98b4 255 Gene3D G3DSA:1.10.3720.10 60 253 5.5E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS06410 1310b725c04367934cc88b97385a98b4 255 PANTHER PTHR30043 2 255 1.9E-82 T 23-04-2016 LT40_RS06410 1310b725c04367934cc88b97385a98b4 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 251 1.2E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS12925 573fb453d470c7bd8938a0e6a4032677 283 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 24 278 1.2E-95 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 LT40_RS12925 573fb453d470c7bd8938a0e6a4032677 283 PANTHER PTHR20941:SF1 1 283 1.4E-110 T 23-04-2016 LT40_RS12925 573fb453d470c7bd8938a0e6a4032677 283 Gene3D G3DSA:3.20.20.20 19 280 3.6E-103 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 LT40_RS12925 573fb453d470c7bd8938a0e6a4032677 283 Pfam PF00809 Pterin binding enzyme 25 264 4.7E-80 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 LT40_RS12925 573fb453d470c7bd8938a0e6a4032677 283 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 58 71 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 LT40_RS12925 573fb453d470c7bd8938a0e6a4032677 283 SUPERFAMILY SSF51717 11 279 1.03E-100 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 LT40_RS12925 573fb453d470c7bd8938a0e6a4032677 283 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 24 39 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 LT40_RS12925 573fb453d470c7bd8938a0e6a4032677 283 PANTHER PTHR20941 1 283 1.4E-110 T 23-04-2016 LT40_RS08655 2c6d18f50610a77f39c4726abe6c7ce3 219 Pfam PF03374 Phage antirepressor protein KilAC domain 111 213 4.8E-22 T 23-04-2016 IPR005039 Antirepressor protein, C-terminal GO:0003677 LT40_RS08655 2c6d18f50610a77f39c4726abe6c7ce3 219 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 1 80 1.7E-18 T 23-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family LT40_RS18180 579b52e49260fc39afc2457ae2d694ac 229 SUPERFAMILY SSF55681 5 223 9.94E-43 T 23-04-2016 LT40_RS18180 579b52e49260fc39afc2457ae2d694ac 229 Gene3D G3DSA:3.90.1550.10 7 217 1.6E-48 T 23-04-2016 LT40_RS20150 1b689861e51fc289b1b9a6b8d70b1715 311 SUPERFAMILY SSF103481 35 138 1.57E-11 T 23-04-2016 LT40_RS20150 1b689861e51fc289b1b9a6b8d70b1715 311 PANTHER PTHR32322 1 303 2.6E-86 T 23-04-2016 LT40_RS20150 1b689861e51fc289b1b9a6b8d70b1715 311 Pfam PF00892 EamA-like transporter family 5 134 2.4E-8 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS20150 1b689861e51fc289b1b9a6b8d70b1715 311 Pfam PF00892 EamA-like transporter family 149 285 8.2E-13 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS20150 1b689861e51fc289b1b9a6b8d70b1715 311 PANTHER PTHR32322:SF8 1 303 2.6E-86 T 23-04-2016 LT40_RS20150 1b689861e51fc289b1b9a6b8d70b1715 311 SUPERFAMILY SSF103481 191 289 7.85E-9 T 23-04-2016 LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 SUPERFAMILY SSF75138 213 337 1.22E-24 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 Gene3D G3DSA:3.40.1390.20 212 349 4.9E-30 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 Pfam PF07085 DRTGG domain 217 329 5.0E-30 T 23-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 PIRSF PIRSF006107 1 697 0.0 T 23-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 Gene3D G3DSA:3.40.50.10750 506 665 7.1E-61 T 23-04-2016 LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 SUPERFAMILY SSF53659 374 693 6.99E-85 T 23-04-2016 LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 PANTHER PTHR23406 161 697 5.6E-48 T 23-04-2016 LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 Pfam PF13500 AAA domain 2 214 8.8E-33 T 23-04-2016 LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 Pfam PF01515 Phosphate acetyl/butaryl transferase 374 689 2.8E-113 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 389 689 6.9E-115 T 23-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 Gene3D G3DSA:3.40.50.300 1 211 1.9E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 PANTHER PTHR23406:SF3 161 697 5.6E-48 T 23-04-2016 LT40_RS20000 a759e22c1cb645045a23fdeecb76ab18 698 SUPERFAMILY SSF52540 1 224 6.69E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS19030 ca5a95b60aa716b7171a4db8991160ba 258 PANTHER PTHR30632:SF5 8 254 7.7E-66 T 23-04-2016 LT40_RS19030 ca5a95b60aa716b7171a4db8991160ba 258 PANTHER PTHR30632 8 254 7.7E-66 T 23-04-2016 LT40_RS19030 ca5a95b60aa716b7171a4db8991160ba 258 Pfam PF13531 Bacterial extracellular solute-binding protein 27 252 4.0E-34 T 23-04-2016 LT40_RS19030 ca5a95b60aa716b7171a4db8991160ba 258 SUPERFAMILY SSF53850 25 252 1.12E-41 T 23-04-2016 LT40_RS19030 ca5a95b60aa716b7171a4db8991160ba 258 Gene3D G3DSA:3.40.190.10 24 130 8.1E-17 T 23-04-2016 LT40_RS19030 ca5a95b60aa716b7171a4db8991160ba 258 Gene3D G3DSA:3.40.190.10 214 250 8.1E-17 T 23-04-2016 LT40_RS06295 90ad36e073ce5ef920830c15e0301d2d 279 SUPERFAMILY SSF52833 38 131 1.38E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS06295 90ad36e073ce5ef920830c15e0301d2d 279 PANTHER PTHR11260:SF258 18 253 1.9E-125 T 23-04-2016 LT40_RS06295 90ad36e073ce5ef920830c15e0301d2d 279 Pfam PF13410 Glutathione S-transferase, C-terminal domain 177 244 5.3E-11 T 23-04-2016 LT40_RS06295 90ad36e073ce5ef920830c15e0301d2d 279 Gene3D G3DSA:3.40.30.10 33 130 3.7E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS06295 90ad36e073ce5ef920830c15e0301d2d 279 Pfam PF02798 Glutathione S-transferase, N-terminal domain 53 127 1.5E-8 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LT40_RS06295 90ad36e073ce5ef920830c15e0301d2d 279 PANTHER PTHR11260 18 253 1.9E-125 T 23-04-2016 LT40_RS06295 90ad36e073ce5ef920830c15e0301d2d 279 Gene3D G3DSA:1.20.1050.10 131 254 3.4E-44 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS06295 90ad36e073ce5ef920830c15e0301d2d 279 SUPERFAMILY SSF47616 133 277 5.15E-33 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS14555 945a452ea6bf1cbf0fa3c606ea70264c 301 PANTHER PTHR33446 17 282 9.2E-51 T 23-04-2016 LT40_RS14555 945a452ea6bf1cbf0fa3c606ea70264c 301 SUPERFAMILY SSF74653 110 123 3.66E-19 T 23-04-2016 LT40_RS14555 945a452ea6bf1cbf0fa3c606ea70264c 301 SUPERFAMILY SSF74653 189 295 3.66E-19 T 23-04-2016 LT40_RS14555 945a452ea6bf1cbf0fa3c606ea70264c 301 Gene3D G3DSA:3.30.1150.10 191 297 9.2E-21 T 23-04-2016 LT40_RS14555 945a452ea6bf1cbf0fa3c606ea70264c 301 PANTHER PTHR33446:SF2 17 282 9.2E-51 T 23-04-2016 LT40_RS14555 945a452ea6bf1cbf0fa3c606ea70264c 301 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 215 292 5.0E-15 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 LT40_RS14555 945a452ea6bf1cbf0fa3c606ea70264c 301 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 217 292 4.8E-13 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 Pfam PF12833 Helix-turn-helix domain 246 322 1.9E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 Gene3D G3DSA:1.10.10.60 280 334 6.4E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 SUPERFAMILY SSF46689 224 274 2.91E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 Gene3D G3DSA:3.40.50.880 17 230 4.8E-43 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 SUPERFAMILY SSF52317 15 205 1.08E-46 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 Pfam PF01965 DJ-1/PfpI family 20 183 2.6E-16 T 23-04-2016 IPR002818 DJ-1/PfpI LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 SUPERFAMILY SSF46689 276 324 5.82E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 PANTHER PTHR11019:SF90 16 39 9.6E-74 T 23-04-2016 LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 PANTHER PTHR11019:SF90 65 331 9.6E-74 T 23-04-2016 LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 277 319 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 PANTHER PTHR11019 16 39 9.6E-74 T 23-04-2016 LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 PANTHER PTHR11019 65 331 9.6E-74 T 23-04-2016 LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 SMART SM00342 240 323 3.4E-28 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS17445 69b6db7952a88609243a992a2dbf7959 364 Gene3D G3DSA:1.10.10.60 231 277 8.2E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS15785 49f54dad4867a02f06d900e4a2f5a43c 228 PANTHER PTHR11751 13 108 4.7E-24 T 23-04-2016 LT40_RS15785 49f54dad4867a02f06d900e4a2f5a43c 228 SMART SM00895 92 220 2.9E-24 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS15785 49f54dad4867a02f06d900e4a2f5a43c 228 SUPERFAMILY SSF48008 90 225 4.97E-29 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS15785 49f54dad4867a02f06d900e4a2f5a43c 228 SUPERFAMILY SSF46785 6 75 2.59E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15785 49f54dad4867a02f06d900e4a2f5a43c 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 3.4E-21 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS15785 49f54dad4867a02f06d900e4a2f5a43c 228 Gene3D G3DSA:1.20.120.530 89 226 5.0E-31 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS15785 49f54dad4867a02f06d900e4a2f5a43c 228 SMART SM00345 12 71 9.8E-22 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS15785 49f54dad4867a02f06d900e4a2f5a43c 228 Gene3D G3DSA:1.10.10.10 3 76 7.6E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15785 49f54dad4867a02f06d900e4a2f5a43c 228 Pfam PF07729 FCD domain 93 219 8.5E-25 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS15785 49f54dad4867a02f06d900e4a2f5a43c 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.8E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS15785 49f54dad4867a02f06d900e4a2f5a43c 228 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.8E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS03955 d29c26f4c347f210dcffddb5b8b299be 205 PANTHER PTHR11260 5 205 1.2E-103 T 23-04-2016 LT40_RS03955 d29c26f4c347f210dcffddb5b8b299be 205 SUPERFAMILY SSF52833 10 104 2.04E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS03955 d29c26f4c347f210dcffddb5b8b299be 205 Pfam PF13410 Glutathione S-transferase, C-terminal domain 122 186 3.2E-7 T 23-04-2016 LT40_RS03955 d29c26f4c347f210dcffddb5b8b299be 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 10 83 2.2E-18 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LT40_RS03955 d29c26f4c347f210dcffddb5b8b299be 205 Gene3D G3DSA:3.40.30.10 6 102 7.6E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS03955 d29c26f4c347f210dcffddb5b8b299be 205 PANTHER PTHR11260:SF44 5 205 1.2E-103 T 23-04-2016 LT40_RS03955 d29c26f4c347f210dcffddb5b8b299be 205 Gene3D G3DSA:1.20.1050.10 103 201 1.4E-12 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS03955 d29c26f4c347f210dcffddb5b8b299be 205 SUPERFAMILY SSF47616 78 204 1.85E-25 T 23-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like LT40_RS00730 29057b2250836691344d35590650ed14 368 PANTHER PTHR30518:SF2 3 341 1.1E-86 T 23-04-2016 LT40_RS00730 29057b2250836691344d35590650ed14 368 Gene3D G3DSA:3.30.160.60 303 336 4.1E-17 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 LT40_RS00730 29057b2250836691344d35590650ed14 368 Pfam PF02618 YceG-like family 45 328 6.5E-73 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like LT40_RS00730 29057b2250836691344d35590650ed14 368 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 2 330 6.8E-76 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like LT40_RS00730 29057b2250836691344d35590650ed14 368 PANTHER PTHR30518 3 341 1.1E-86 T 23-04-2016 LT40_RS13150 ad8eb4239224dec2e6cea44b5791319a 638 SUPERFAMILY SSF58104 329 638 4.19E-79 T 23-04-2016 LT40_RS13150 ad8eb4239224dec2e6cea44b5791319a 638 Pfam PF16591 Helical bimodular sensor domain 33 285 3.3E-80 T 23-04-2016 IPR032255 Helical bimodular sensor domain LT40_RS13150 ad8eb4239224dec2e6cea44b5791319a 638 SMART SM00283 376 637 1.4E-86 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS13150 ad8eb4239224dec2e6cea44b5791319a 638 PANTHER PTHR32089:SF64 273 638 1.3E-132 T 23-04-2016 LT40_RS13150 ad8eb4239224dec2e6cea44b5791319a 638 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 636 4.4E-51 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS13150 ad8eb4239224dec2e6cea44b5791319a 638 SMART SM01358 33 287 2.0E-57 T 23-04-2016 IPR032255 Helical bimodular sensor domain LT40_RS13150 ad8eb4239224dec2e6cea44b5791319a 638 Gene3D G3DSA:1.10.287.950 391 609 1.8E-60 T 23-04-2016 LT40_RS13150 ad8eb4239224dec2e6cea44b5791319a 638 PANTHER PTHR32089 273 638 1.3E-132 T 23-04-2016 LT40_RS13150 ad8eb4239224dec2e6cea44b5791319a 638 Pfam PF00672 HAMP domain 291 358 1.4E-15 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS13150 ad8eb4239224dec2e6cea44b5791319a 638 SMART SM00304 368 414 29.0 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS13150 ad8eb4239224dec2e6cea44b5791319a 638 SMART SM00304 309 361 1.8E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS17540 fec8f18ca2196bb1a7cecd18d5b37943 1004 PANTHER PTHR11219 77 674 1.9E-109 T 23-04-2016 LT40_RS17540 fec8f18ca2196bb1a7cecd18d5b37943 1004 PANTHER PTHR11219:SF45 77 674 1.9E-109 T 23-04-2016 LT40_RS17540 fec8f18ca2196bb1a7cecd18d5b37943 1004 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 594 673 1.0E-25 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 LT40_RS08705 11f847e2b1d11e3745207d110a93e2f5 112 PANTHER PTHR41286:SF1 36 106 4.9E-17 T 23-04-2016 LT40_RS08705 11f847e2b1d11e3745207d110a93e2f5 112 PANTHER PTHR41286 36 106 4.9E-17 T 23-04-2016 LT40_RS08705 11f847e2b1d11e3745207d110a93e2f5 112 Pfam PF01844 HNH endonuclease 56 100 4.6E-6 T 23-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 LT40_RS08705 11f847e2b1d11e3745207d110a93e2f5 112 SMART SM00507 45 99 3.7E-5 T 23-04-2016 IPR003615 HNH nuclease LT40_RS01905 3e2af7f1aa32d69d7e4e5075c6202208 328 PANTHER PTHR11005 52 151 6.0E-16 T 23-04-2016 LT40_RS01905 3e2af7f1aa32d69d7e4e5075c6202208 328 SUPERFAMILY SSF53474 50 313 2.7E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS01905 3e2af7f1aa32d69d7e4e5075c6202208 328 Gene3D G3DSA:3.40.50.1820 38 311 1.2E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS01905 3e2af7f1aa32d69d7e4e5075c6202208 328 Pfam PF12146 Serine aminopeptidase, S33 79 195 1.2E-8 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 LT40_RS10055 36c9c837f4c52fcd961797fa87dfe776 333 SUPERFAMILY SSF53850 34 271 2.25E-31 T 23-04-2016 LT40_RS10055 36c9c837f4c52fcd961797fa87dfe776 333 PANTHER PTHR30024 6 326 9.2E-112 T 23-04-2016 LT40_RS10055 36c9c837f4c52fcd961797fa87dfe776 333 Gene3D G3DSA:3.40.190.10 49 146 4.6E-4 T 23-04-2016 LT40_RS10055 36c9c837f4c52fcd961797fa87dfe776 333 PANTHER PTHR30024:SF2 6 326 9.2E-112 T 23-04-2016 LT40_RS10055 36c9c837f4c52fcd961797fa87dfe776 333 Pfam PF13379 NMT1-like family 22 266 4.6E-37 T 23-04-2016 LT40_RS06515 a3e3fb59b56861f3d8119e99f2904498 654 ProSitePatterns PS01303 BCCT family of transporters signature. 315 324 - T 23-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 LT40_RS06515 a3e3fb59b56861f3d8119e99f2904498 654 PANTHER PTHR30047:SF2 9 654 3.6E-279 T 23-04-2016 LT40_RS06515 a3e3fb59b56861f3d8119e99f2904498 654 PANTHER PTHR30047 9 654 3.6E-279 T 23-04-2016 LT40_RS06515 a3e3fb59b56861f3d8119e99f2904498 654 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 15 496 1.1E-194 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 LT40_RS06515 a3e3fb59b56861f3d8119e99f2904498 654 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 53 498 1.6E-160 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 LT40_RS06335 9cf1b479971acabcb4e4f8351f071b5e 399 Gene3D G3DSA:3.40.50.10540 311 399 5.8E-98 T 23-04-2016 IPR023606 CoA-transferase family III domain LT40_RS06335 9cf1b479971acabcb4e4f8351f071b5e 399 Gene3D G3DSA:3.40.50.10540 6 220 5.8E-98 T 23-04-2016 IPR023606 CoA-transferase family III domain LT40_RS06335 9cf1b479971acabcb4e4f8351f071b5e 399 SUPERFAMILY SSF89796 7 399 7.33E-120 T 23-04-2016 IPR023606 CoA-transferase family III domain LT40_RS06335 9cf1b479971acabcb4e4f8351f071b5e 399 PANTHER PTHR24023 248 386 6.0E-19 T 23-04-2016 LT40_RS06335 9cf1b479971acabcb4e4f8351f071b5e 399 PANTHER PTHR24023 84 217 6.0E-19 T 23-04-2016 LT40_RS06335 9cf1b479971acabcb4e4f8351f071b5e 399 PANTHER PTHR24023:SF593 248 386 6.0E-19 T 23-04-2016 LT40_RS06335 9cf1b479971acabcb4e4f8351f071b5e 399 PANTHER PTHR24023:SF593 84 217 6.0E-19 T 23-04-2016 LT40_RS06335 9cf1b479971acabcb4e4f8351f071b5e 399 Pfam PF02515 CoA-transferase family III 9 376 1.4E-107 T 23-04-2016 IPR003673 CoA-transferase family III GO:0003824 LT40_RS06335 9cf1b479971acabcb4e4f8351f071b5e 399 Gene3D G3DSA:3.30.1540.10 226 310 1.1E-20 T 23-04-2016 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 SUPERFAMILY SSF53738 257 363 5.1E-28 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 1.4E-14 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 1.4E-14 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 1.4E-14 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 PANTHER PTHR22573 2 445 9.8E-170 T 23-04-2016 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 SUPERFAMILY SSF53738 2 180 4.71E-48 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 442 6.3E-192 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 Gene3D G3DSA:3.40.120.10 3 152 6.6E-46 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 PANTHER PTHR22573:SF15 2 445 9.8E-170 T 23-04-2016 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 4.3E-44 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 Gene3D G3DSA:3.40.120.10 175 249 1.2E-25 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 Gene3D G3DSA:3.40.120.10 250 366 4.1E-29 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 156 253 2.0E-18 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 SUPERFAMILY SSF55957 359 445 6.02E-19 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 441 1.6E-11 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 444 46.984 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 362 1.3E-28 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 Gene3D G3DSA:3.30.310.50 368 445 1.8E-15 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS12920 69a2a13f62c20c07a22ec645b1562380 446 SUPERFAMILY SSF53738 155 255 5.49E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 PANTHER PTHR24423 177 433 6.3E-45 T 23-04-2016 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 PANTHER PTHR24423 1 9 6.3E-45 T 23-04-2016 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 SUPERFAMILY SSF47384 219 292 5.69E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 SUPERFAMILY SSF158472 183 233 3.53E-5 T 23-04-2016 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 SUPERFAMILY SSF55874 286 441 1.57E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 293 6.6E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 Pfam PF00672 HAMP domain 169 231 3.5E-11 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 Gene3D G3DSA:3.30.565.10 281 441 2.2E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 SMART SM00304 183 235 1.6E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 Gene3D G3DSA:1.10.287.130 226 280 2.8E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 SMART SM00387 333 442 6.9E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 429 6.3E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 1.5E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 1.5E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 1.5E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20680 f58efad869576fad7d7efec2e1b4209f 442 SMART SM00388 236 294 1.7E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS03810 5e912e4a7f038bf785d726262f146ead 178 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 16 168 1.8E-49 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LT40_RS03810 5e912e4a7f038bf785d726262f146ead 178 PIRSF PIRSF006118 3 178 8.8E-69 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 LT40_RS03810 5e912e4a7f038bf785d726262f146ead 178 SUPERFAMILY SSF56784 15 170 6.85E-42 T 23-04-2016 IPR023214 HAD-like domain LT40_RS03810 5e912e4a7f038bf785d726262f146ead 178 Gene3D G3DSA:3.40.50.1000 7 173 5.0E-47 T 23-04-2016 IPR023214 HAD-like domain LT40_RS03810 5e912e4a7f038bf785d726262f146ead 178 Pfam PF08282 haloacid dehalogenase-like hydrolase 91 150 5.8E-8 T 23-04-2016 IPR023214 HAD-like domain LT40_RS03810 5e912e4a7f038bf785d726262f146ead 178 PANTHER PTHR21485 8 174 7.6E-53 T 23-04-2016 LT40_RS20935 94ca1ed577f29a11f7c4be6f3dead519 552 PANTHER PTHR41244 370 551 3.7E-27 T 23-04-2016 LT40_RS20935 94ca1ed577f29a11f7c4be6f3dead519 552 Pfam PF14307 Glycosyltransferase WbsX 469 551 3.4E-36 T 23-04-2016 IPR032719 Glycosyltransferase WbsX LT40_RS20935 94ca1ed577f29a11f7c4be6f3dead519 552 PANTHER PTHR41244:SF1 370 551 3.7E-27 T 23-04-2016 LT40_RS20935 94ca1ed577f29a11f7c4be6f3dead519 552 Gene3D G3DSA:1.10.150.160 9 37 3.6E-4 T 23-04-2016 IPR023114 Elongated TPR repeat-containing domain LT40_RS20935 94ca1ed577f29a11f7c4be6f3dead519 552 Pfam PF05045 Rhamnan synthesis protein F 187 427 3.7E-45 T 23-04-2016 IPR007739 Rhamnan synthesis F LT40_RS04855 356120257fd7d64594d51f992ec80bfd 61 PANTHER PTHR33505 1 58 6.6E-27 T 23-04-2016 LT40_RS04855 356120257fd7d64594d51f992ec80bfd 61 Gene3D G3DSA:2.20.25.10 8 58 2.3E-25 T 23-04-2016 LT40_RS04855 356120257fd7d64594d51f992ec80bfd 61 SUPERFAMILY SSF158997 1 56 2.22E-20 T 23-04-2016 LT40_RS04855 356120257fd7d64594d51f992ec80bfd 61 Pfam PF03966 Trm112p-like protein 2 41 8.2E-10 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 LT40_RS04855 356120257fd7d64594d51f992ec80bfd 61 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.854 T 23-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 LT40_RS18730 fdce8c2515a3267866d098cb22c315b6 215 Pfam PF09335 SNARE associated Golgi protein 47 172 1.1E-22 T 23-04-2016 IPR032816 SNARE associated Golgi protein LT40_RS18730 fdce8c2515a3267866d098cb22c315b6 215 PANTHER PTHR30353:SF0 1 210 9.7E-86 T 23-04-2016 LT40_RS18730 fdce8c2515a3267866d098cb22c315b6 215 PANTHER PTHR30353 1 210 9.7E-86 T 23-04-2016 IPR032818 DedA family LT40_RS14755 09b1cde7e57fd8ab5f38b1d631acc000 452 Pfam PF01926 50S ribosome-binding GTPase 7 152 2.2E-17 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 LT40_RS14755 09b1cde7e57fd8ab5f38b1d631acc000 452 PANTHER PTHR11649 7 99 3.6E-16 T 23-04-2016 LT40_RS14755 09b1cde7e57fd8ab5f38b1d631acc000 452 PANTHER PTHR11649 116 152 3.6E-16 T 23-04-2016 LT40_RS14755 09b1cde7e57fd8ab5f38b1d631acc000 452 Gene3D G3DSA:3.40.50.300 109 155 6.6E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14755 09b1cde7e57fd8ab5f38b1d631acc000 452 Gene3D G3DSA:3.40.50.300 3 76 6.6E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14755 09b1cde7e57fd8ab5f38b1d631acc000 452 Pfam PF11981 Domain of unknown function (DUF3482) 165 449 2.1E-107 T 23-04-2016 IPR021871 Protein of unknown function DUF3482 LT40_RS14755 09b1cde7e57fd8ab5f38b1d631acc000 452 SUPERFAMILY SSF52540 3 72 8.89E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14755 09b1cde7e57fd8ab5f38b1d631acc000 452 SUPERFAMILY SSF52540 111 155 8.89E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13460 08345668c82dbaa9690f4cef92429c99 370 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 6 41 1.1E-16 T 23-04-2016 IPR011723 Zinc finger/thioredoxin putative LT40_RS13460 08345668c82dbaa9690f4cef92429c99 370 Pfam PF11906 Protein of unknown function (DUF3426) 221 366 2.1E-38 T 23-04-2016 IPR021834 Protein of unknown function DUF3426 LT40_RS13460 08345668c82dbaa9690f4cef92429c99 370 Pfam PF13719 zinc-ribbon domain 6 41 3.6E-10 T 23-04-2016 IPR011723 Zinc finger/thioredoxin putative LT40_RS05530 4eb4547a40cc03b265534cae31f8d761 308 Pfam PF00892 EamA-like transporter family 14 142 9.4E-15 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS05530 4eb4547a40cc03b265534cae31f8d761 308 Pfam PF00892 EamA-like transporter family 158 294 2.1E-19 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS05530 4eb4547a40cc03b265534cae31f8d761 308 PANTHER PTHR22911 11 304 1.8E-116 T 23-04-2016 LT40_RS05530 4eb4547a40cc03b265534cae31f8d761 308 SUPERFAMILY SSF103481 50 146 3.79E-11 T 23-04-2016 LT40_RS05530 4eb4547a40cc03b265534cae31f8d761 308 PANTHER PTHR22911:SF63 11 304 1.8E-116 T 23-04-2016 LT40_RS05530 4eb4547a40cc03b265534cae31f8d761 308 SUPERFAMILY SSF103481 195 297 1.29E-12 T 23-04-2016 LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 Gene3D G3DSA:3.30.43.10 1 51 2.6E-15 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 SUPERFAMILY SSF55447 225 324 4.32E-27 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 PANTHER PTHR11908:SF97 163 325 1.5E-106 T 23-04-2016 LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 PANTHER PTHR11908:SF97 1 119 1.5E-106 T 23-04-2016 LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 218 1.8E-42 T 23-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 PANTHER PTHR11908 163 325 1.5E-106 T 23-04-2016 LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 PANTHER PTHR11908 1 119 1.5E-106 T 23-04-2016 LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 Gene3D G3DSA:3.30.390.50 225 324 4.0E-35 T 23-04-2016 LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 SUPERFAMILY SSF56176 1 218 6.0E-54 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 SMART SM01092 227 325 1.2E-27 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 Gene3D G3DSA:3.30.465.10 57 113 2.1E-31 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 Gene3D G3DSA:3.30.465.10 158 218 2.1E-31 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS12510 47d4bf7a439ac079d2aa5f321f1b7348 331 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 227 320 4.5E-15 T 23-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 PANTHER PTHR22942 3 335 2.1E-202 T 23-04-2016 LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 SUPERFAMILY SSF52540 4 267 7.55E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 PANTHER PTHR22942:SF1 3 335 2.1E-202 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 SMART SM00382 57 228 1.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 Gene3D G3DSA:3.40.50.300 27 267 1.4E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 SUPERFAMILY SSF54752 270 325 1.83E-18 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 8.8E-169 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 ProSitePatterns PS00321 recA signature. 213 221 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 Gene3D G3DSA:3.30.250.10 271 326 9.1E-25 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 Pfam PF00154 recA bacterial DNA recombination protein 7 267 6.0E-144 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 PRINTS PR00142 RecA protein signature 210 238 2.8E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 PRINTS PR00142 RecA protein signature 127 156 2.8E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 PRINTS PR00142 RecA protein signature 243 272 2.8E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 PRINTS PR00142 RecA protein signature 297 314 2.8E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 PRINTS PR00142 RecA protein signature 93 122 2.8E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 PRINTS PR00142 RecA protein signature 165 194 2.8E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LT40_RS00585 7fef406e9cfe630a04331349ee99dc5a 356 Hamap MF_00268 Protein RecA [recA]. 5 329 50.466 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LT40_RS07565 5ff3e047d01c6149f1e6156b4e735a68 397 SUPERFAMILY SSF51905 108 251 2.81E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07565 5ff3e047d01c6149f1e6156b4e735a68 397 SUPERFAMILY SSF51905 2 139 2.5E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07565 5ff3e047d01c6149f1e6156b4e735a68 397 PANTHER PTHR10632:SF2 2 390 9.4E-168 T 23-04-2016 LT40_RS07565 5ff3e047d01c6149f1e6156b4e735a68 397 Gene3D G3DSA:3.50.50.60 252 321 2.1E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07565 5ff3e047d01c6149f1e6156b4e735a68 397 Gene3D G3DSA:3.50.50.60 2 109 2.1E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07565 5ff3e047d01c6149f1e6156b4e735a68 397 PANTHER PTHR10632 2 390 9.4E-168 T 23-04-2016 LT40_RS06875 5d0d2e0a4805a2a8a6489e7d1029d778 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 263 4.2E-50 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LT40_RS06875 5d0d2e0a4805a2a8a6489e7d1029d778 266 Gene3D G3DSA:1.10.12.10 207 262 5.5E-11 T 23-04-2016 IPR014748 Crontonase, C-terminal LT40_RS06875 5d0d2e0a4805a2a8a6489e7d1029d778 266 PANTHER PTHR11941:SF86 3 261 3.4E-101 T 23-04-2016 LT40_RS06875 5d0d2e0a4805a2a8a6489e7d1029d778 266 PANTHER PTHR11941 3 261 3.4E-101 T 23-04-2016 LT40_RS06875 5d0d2e0a4805a2a8a6489e7d1029d778 266 SUPERFAMILY SSF52096 2 262 1.1E-70 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS06875 5d0d2e0a4805a2a8a6489e7d1029d778 266 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 LT40_RS06875 5d0d2e0a4805a2a8a6489e7d1029d778 266 Gene3D G3DSA:3.90.226.10 3 204 9.7E-57 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS14375 3487bf75e8b808996c8a80f0e35b7d83 145 SUPERFAMILY SSF69500 1 144 1.57E-52 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain LT40_RS14375 3487bf75e8b808996c8a80f0e35b7d83 145 PANTHER PTHR10472 2 144 5.6E-60 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LT40_RS14375 3487bf75e8b808996c8a80f0e35b7d83 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 143 2.2E-48 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LT40_RS14375 3487bf75e8b808996c8a80f0e35b7d83 145 Gene3D G3DSA:3.50.80.10 1 144 1.9E-52 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain LT40_RS14375 3487bf75e8b808996c8a80f0e35b7d83 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 32.974 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LT40_RS14375 3487bf75e8b808996c8a80f0e35b7d83 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 1.5E-54 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LT40_RS08010 6a29c94440c2ca1fc2eaae3989bfce1b 443 PANTHER PTHR23514:SF11 7 181 4.0E-146 T 23-04-2016 LT40_RS08010 6a29c94440c2ca1fc2eaae3989bfce1b 443 PANTHER PTHR23514:SF11 199 425 4.0E-146 T 23-04-2016 LT40_RS08010 6a29c94440c2ca1fc2eaae3989bfce1b 443 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 22 425 1.2E-110 T 23-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 LT40_RS08010 6a29c94440c2ca1fc2eaae3989bfce1b 443 Gene3D G3DSA:1.20.1250.20 23 225 7.5E-13 T 23-04-2016 LT40_RS08010 6a29c94440c2ca1fc2eaae3989bfce1b 443 PANTHER PTHR23514 7 181 4.0E-146 T 23-04-2016 LT40_RS08010 6a29c94440c2ca1fc2eaae3989bfce1b 443 PANTHER PTHR23514 199 425 4.0E-146 T 23-04-2016 LT40_RS08010 6a29c94440c2ca1fc2eaae3989bfce1b 443 SUPERFAMILY SSF103473 202 431 1.31E-40 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS08010 6a29c94440c2ca1fc2eaae3989bfce1b 443 SUPERFAMILY SSF103473 13 172 1.31E-40 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS08010 6a29c94440c2ca1fc2eaae3989bfce1b 443 Pfam PF07690 Major Facilitator Superfamily 27 369 3.3E-17 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS08010 6a29c94440c2ca1fc2eaae3989bfce1b 443 Gene3D G3DSA:1.20.1250.20 247 428 2.5E-10 T 23-04-2016 LT40_RS05435 8f4c9a15596e2b910897f676c1e3fb65 609 Pfam PF00664 ABC transporter transmembrane region 43 299 1.7E-10 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS05435 8f4c9a15596e2b910897f676c1e3fb65 609 SUPERFAMILY SSF52540 352 601 1.26E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05435 8f4c9a15596e2b910897f676c1e3fb65 609 SMART SM00382 386 577 1.8E-20 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS05435 8f4c9a15596e2b910897f676c1e3fb65 609 PANTHER PTHR24221:SF203 2 609 0.0 T 23-04-2016 LT40_RS05435 8f4c9a15596e2b910897f676c1e3fb65 609 Pfam PF00005 ABC transporter 378 531 3.5E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS05435 8f4c9a15596e2b910897f676c1e3fb65 609 Gene3D G3DSA:1.20.1560.10 30 337 1.5E-31 T 23-04-2016 LT40_RS05435 8f4c9a15596e2b910897f676c1e3fb65 609 PANTHER PTHR24221 2 609 0.0 T 23-04-2016 LT40_RS05435 8f4c9a15596e2b910897f676c1e3fb65 609 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS05435 8f4c9a15596e2b910897f676c1e3fb65 609 SUPERFAMILY SSF90123 29 342 1.83E-48 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS05435 8f4c9a15596e2b910897f676c1e3fb65 609 Gene3D G3DSA:3.40.50.300 361 596 1.1E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01300 0f92ed992cab5e1380656390f0fb6e3f 181 SUPERFAMILY SSF51182 4 177 3.06E-21 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS01300 0f92ed992cab5e1380656390f0fb6e3f 181 Gene3D G3DSA:2.60.120.10 4 177 1.8E-24 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS01300 0f92ed992cab5e1380656390f0fb6e3f 181 Pfam PF03079 ARD/ARD' family 20 164 2.1E-10 T 23-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 LT40_RS17920 664a7209cf420d491d7aaaae5d7824a4 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.6E-16 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LT40_RS17920 664a7209cf420d491d7aaaae5d7824a4 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 1.6E-16 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LT40_RS17920 664a7209cf420d491d7aaaae5d7824a4 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 1.6E-16 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LT40_RS17920 664a7209cf420d491d7aaaae5d7824a4 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 1.6E-16 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LT40_RS17920 664a7209cf420d491d7aaaae5d7824a4 149 SUPERFAMILY SSF52788 2 142 6.41E-38 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily LT40_RS17920 664a7209cf420d491d7aaaae5d7824a4 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 139 5.1E-33 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily LT40_RS17920 664a7209cf420d491d7aaaae5d7824a4 149 PANTHER PTHR11717:SF14 1 139 1.9E-26 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LT40_RS17920 664a7209cf420d491d7aaaae5d7824a4 149 SMART SM00226 3 141 5.3E-36 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily LT40_RS17920 664a7209cf420d491d7aaaae5d7824a4 149 Gene3D G3DSA:3.40.50.270 3 145 5.3E-42 T 23-04-2016 LT40_RS17920 664a7209cf420d491d7aaaae5d7824a4 149 PANTHER PTHR11717 1 139 1.9E-26 T 23-04-2016 LT40_RS09210 59460697a34ee82eabaf6fd76b1829e4 323 PANTHER PTHR10366:SF329 5 323 1.3E-98 T 23-04-2016 LT40_RS09210 59460697a34ee82eabaf6fd76b1829e4 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 228 2.0E-32 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LT40_RS09210 59460697a34ee82eabaf6fd76b1829e4 323 PANTHER PTHR10366 5 323 1.3E-98 T 23-04-2016 LT40_RS09210 59460697a34ee82eabaf6fd76b1829e4 323 SUPERFAMILY SSF51735 4 319 9.82E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09210 59460697a34ee82eabaf6fd76b1829e4 323 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 178 0.0064 T 23-04-2016 LT40_RS09210 59460697a34ee82eabaf6fd76b1829e4 323 Gene3D G3DSA:3.40.50.720 6 313 3.9E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS03265 b873dba36927ca1fd79f4b2a07c120f9 237 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 23 230 3.7E-60 T 23-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 LT40_RS03265 b873dba36927ca1fd79f4b2a07c120f9 237 PANTHER PTHR11054 23 235 4.2E-43 T 23-04-2016 LT40_RS03265 b873dba36927ca1fd79f4b2a07c120f9 237 SUPERFAMILY SSF100950 18 231 1.14E-54 T 23-04-2016 LT40_RS03265 b873dba36927ca1fd79f4b2a07c120f9 237 Gene3D G3DSA:3.40.50.1360 25 236 1.0E-51 T 23-04-2016 LT40_RS03265 b873dba36927ca1fd79f4b2a07c120f9 237 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 22 235 1.9E-54 T 23-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 LT40_RS08560 c2a3fa84d8d4360cd5641d20710da331 520 Gene3D G3DSA:3.40.50.300 313 517 6.2E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08560 c2a3fa84d8d4360cd5641d20710da331 520 PANTHER PTHR19211 1 516 0.0 T 23-04-2016 LT40_RS08560 c2a3fa84d8d4360cd5641d20710da331 520 Pfam PF12848 ABC transporter 216 290 4.2E-21 T 23-04-2016 IPR032781 ABC-transporter extension domain LT40_RS08560 c2a3fa84d8d4360cd5641d20710da331 520 SUPERFAMILY SSF52540 3 229 2.34E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08560 c2a3fa84d8d4360cd5641d20710da331 520 PANTHER PTHR19211:SF38 1 516 0.0 T 23-04-2016 LT40_RS08560 c2a3fa84d8d4360cd5641d20710da331 520 SUPERFAMILY SSF52540 288 518 5.91E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08560 c2a3fa84d8d4360cd5641d20710da331 520 SMART SM00382 336 501 2.5E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS08560 c2a3fa84d8d4360cd5641d20710da331 520 SMART SM00382 18 237 7.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS08560 c2a3fa84d8d4360cd5641d20710da331 520 Gene3D G3DSA:3.40.50.300 2 262 5.2E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08560 c2a3fa84d8d4360cd5641d20710da331 520 Pfam PF00005 ABC transporter 328 456 7.7E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS08560 c2a3fa84d8d4360cd5641d20710da331 520 Pfam PF00005 ABC transporter 10 176 1.7E-18 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS19400 b0951bc8de58c7fd44347fb4ef519124 113 PANTHER PTHR30305 2 113 5.9E-79 T 23-04-2016 LT40_RS19400 b0951bc8de58c7fd44347fb4ef519124 113 SUPERFAMILY SSF57783 3 35 3.15E-14 T 23-04-2016 LT40_RS19400 b0951bc8de58c7fd44347fb4ef519124 113 SUPERFAMILY SSF82057 41 113 8.24E-29 T 23-04-2016 LT40_RS19400 b0951bc8de58c7fd44347fb4ef519124 113 Gene3D G3DSA:2.30.30.40 44 113 4.4E-37 T 23-04-2016 LT40_RS19400 b0951bc8de58c7fd44347fb4ef519124 113 Gene3D G3DSA:2.20.25.10 2 40 7.6E-22 T 23-04-2016 LT40_RS19400 b0951bc8de58c7fd44347fb4ef519124 113 Pfam PF03831 PhnA domain 46 113 4.3E-33 T 23-04-2016 IPR013988 PhnA protein, C-terminal LT40_RS19400 b0951bc8de58c7fd44347fb4ef519124 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 112 2.5E-50 T 23-04-2016 IPR004624 PhnA protein LT40_RS19400 b0951bc8de58c7fd44347fb4ef519124 113 Pfam PF08274 PhnA Zinc-Ribbon 3 32 4.4E-16 T 23-04-2016 IPR013987 PhnA protein, N-terminal LT40_RS07885 a98b521c67b983eefc2b7a165c800bab 318 Gene3D G3DSA:3.40.50.1010 7 194 5.7E-14 T 23-04-2016 IPR029060 PIN domain-like LT40_RS07885 a98b521c67b983eefc2b7a165c800bab 318 Pfam PF09722 Protein of unknown function (DUF2384) 263 301 7.4E-8 T 23-04-2016 IPR024467 Domain of unknown function DUF2384 LT40_RS07885 a98b521c67b983eefc2b7a165c800bab 318 Pfam PF01936 NYN domain 12 191 1.7E-7 T 23-04-2016 IPR021139 NYN domain, limkain-b1-type LT40_RS11680 e20b360612ac3cd0d1162dc2c0aaf982 297 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 73 277 4.7E-68 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS11680 e20b360612ac3cd0d1162dc2c0aaf982 297 PANTHER PTHR11820 1 290 4.5E-139 T 23-04-2016 LT40_RS11680 e20b360612ac3cd0d1162dc2c0aaf982 297 PANTHER PTHR11820:SF71 1 290 4.5E-139 T 23-04-2016 LT40_RS11680 e20b360612ac3cd0d1162dc2c0aaf982 297 SUPERFAMILY SSF56529 62 279 1.7E-79 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS11680 e20b360612ac3cd0d1162dc2c0aaf982 297 Gene3D G3DSA:3.90.850.10 66 278 8.8E-81 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS06235 af58cece538d2efc9cf3a90d75034f10 322 Pfam PF00149 Calcineurin-like phosphoesterase 10 148 5.3E-9 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LT40_RS06235 af58cece538d2efc9cf3a90d75034f10 322 SUPERFAMILY SSF56300 245 302 3.8E-30 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS06235 af58cece538d2efc9cf3a90d75034f10 322 SUPERFAMILY SSF56300 6 173 3.8E-30 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS06235 af58cece538d2efc9cf3a90d75034f10 322 PANTHER PTHR11668:SF281 1 85 9.3E-23 T 23-04-2016 LT40_RS06235 af58cece538d2efc9cf3a90d75034f10 322 Gene3D G3DSA:3.60.21.10 203 315 1.5E-38 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS06235 af58cece538d2efc9cf3a90d75034f10 322 Gene3D G3DSA:3.60.21.10 3 162 1.5E-38 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS06235 af58cece538d2efc9cf3a90d75034f10 322 PANTHER PTHR11668 1 85 9.3E-23 T 23-04-2016 LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 Gene3D G3DSA:3.40.50.720 3 229 2.2E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.3E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 Pfam PF00106 short chain dehydrogenase 4 197 3.5E-50 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 PANTHER PTHR24322 155 186 2.5E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 PANTHER PTHR24322 8 139 2.5E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.9E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.9E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.9E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 PANTHER PTHR24322:SF513 155 186 2.5E-46 T 23-04-2016 LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 PANTHER PTHR24322:SF513 8 139 2.5E-46 T 23-04-2016 LT40_RS02700 8522f5905c4c4f8188611c5cc4053cd8 250 SUPERFAMILY SSF51735 2 240 2.08E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 PANTHER PTHR30579:SF2 1 293 1.1E-112 T 23-04-2016 LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 SUPERFAMILY SSF53850 85 289 2.17E-19 T 23-04-2016 LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 Pfam PF03466 LysR substrate binding domain 92 276 2.1E-11 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 Gene3D G3DSA:1.10.10.10 2 84 8.6E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 SUPERFAMILY SSF46785 1 107 1.2E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 Gene3D G3DSA:3.40.190.10 92 197 7.1E-34 T 23-04-2016 LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 PANTHER PTHR30579 1 293 1.1E-112 T 23-04-2016 LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 4.4E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 4.4E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 4.4E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 292 5.3E-111 T 23-04-2016 IPR017685 HTH-type transcriptional regulator ArgP LT40_RS04225 32bcf1be815e94b9757b1a700430228d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.1E-16 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 Pfam PF00694 Aconitase C-terminal domain 657 787 1.2E-28 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 SUPERFAMILY SSF52016 598 857 1.53E-66 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 23-04-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|UniPathway: UPA00946 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 Gene3D G3DSA:3.30.499.10 22 226 1.0E-62 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PANTHER PTHR11670:SF43 1 677 0.0 T 23-04-2016 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PANTHER PTHR11670:SF43 720 861 0.0 T 23-04-2016 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 9.1E-147 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PRINTS PR00415 Aconitase family signature 191 204 7.2E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PRINTS PR00415 Aconitase family signature 402 413 7.2E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PRINTS PR00415 Aconitase family signature 138 151 7.2E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PRINTS PR00415 Aconitase family signature 267 280 7.2E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PRINTS PR00415 Aconitase family signature 205 220 7.2E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PRINTS PR00415 Aconitase family signature 162 170 7.2E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PRINTS PR00415 Aconitase family signature 360 374 7.2E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PRINTS PR00415 Aconitase family signature 281 294 7.2E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PRINTS PR00415 Aconitase family signature 464 477 7.2E-28 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 SUPERFAMILY SSF53732 24 587 1.07E-181 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 Gene3D G3DSA:3.30.499.10 361 545 5.5E-54 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 Gene3D G3DSA:3.40.1060.10 227 360 6.4E-34 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PANTHER PTHR11670 1 677 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 PANTHER PTHR11670 720 861 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 LT40_RS11205 13a378d909d920b40e1f27b079553d47 871 Gene3D G3DSA:3.20.19.10 606 857 6.1E-63 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel LT40_RS11785 02f16fa8b9c0ce837a548d34710b252b 377 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 23-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 LT40_RS11785 02f16fa8b9c0ce837a548d34710b252b 377 Gene3D G3DSA:3.20.20.70 7 375 7.0E-130 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS11785 02f16fa8b9c0ce837a548d34710b252b 377 PANTHER PTHR10578:SF65 7 377 1.3E-158 T 23-04-2016 LT40_RS11785 02f16fa8b9c0ce837a548d34710b252b 377 PANTHER PTHR10578 7 377 1.3E-158 T 23-04-2016 LT40_RS11785 02f16fa8b9c0ce837a548d34710b252b 377 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 377 72.115 T 23-04-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 LT40_RS11785 02f16fa8b9c0ce837a548d34710b252b 377 Pfam PF01070 FMN-dependent dehydrogenase 13 375 3.0E-122 T 23-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 LT40_RS11785 02f16fa8b9c0ce837a548d34710b252b 377 SUPERFAMILY SSF51395 223 375 7.33E-95 T 23-04-2016 LT40_RS11785 02f16fa8b9c0ce837a548d34710b252b 377 SUPERFAMILY SSF51395 7 193 7.33E-95 T 23-04-2016 LT40_RS11785 02f16fa8b9c0ce837a548d34710b252b 377 PIRSF PIRSF000138 2 377 3.1E-120 T 23-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 LT40_RS08125 6ec6f0f571f1ec18dad10643ef908f51 361 SUPERFAMILY SSF51412 5 74 2.9E-61 T 23-04-2016 LT40_RS08125 6ec6f0f571f1ec18dad10643ef908f51 361 SUPERFAMILY SSF51412 104 353 2.9E-61 T 23-04-2016 LT40_RS08125 6ec6f0f571f1ec18dad10643ef908f51 361 Gene3D G3DSA:3.20.20.70 5 341 2.7E-66 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS08125 6ec6f0f571f1ec18dad10643ef908f51 361 PANTHER PTHR32332:SF12 1 81 2.0E-123 T 23-04-2016 LT40_RS08125 6ec6f0f571f1ec18dad10643ef908f51 361 PANTHER PTHR32332:SF12 111 351 2.0E-123 T 23-04-2016 LT40_RS08125 6ec6f0f571f1ec18dad10643ef908f51 361 Pfam PF03060 Nitronate monooxygenase 7 348 1.4E-82 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 LT40_RS08125 6ec6f0f571f1ec18dad10643ef908f51 361 PANTHER PTHR32332 1 81 2.0E-123 T 23-04-2016 LT40_RS08125 6ec6f0f571f1ec18dad10643ef908f51 361 PANTHER PTHR32332 111 351 2.0E-123 T 23-04-2016 LT40_RS17050 ee52b6b30220ac01c0e369036c39868e 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 291 1.3E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17050 ee52b6b30220ac01c0e369036c39868e 306 PANTHER PTHR30193:SF5 5 306 4.5E-133 T 23-04-2016 LT40_RS17050 ee52b6b30220ac01c0e369036c39868e 306 PANTHER PTHR30193 5 306 4.5E-133 T 23-04-2016 LT40_RS17050 ee52b6b30220ac01c0e369036c39868e 306 SUPERFAMILY SSF161098 20 296 1.21E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17050 ee52b6b30220ac01c0e369036c39868e 306 Gene3D G3DSA:1.10.3720.10 18 296 4.5E-52 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11540 b3313a993267471dc9ed73ddd7fc4264 283 Gene3D G3DSA:3.40.190.10 92 179 4.5E-11 T 23-04-2016 LT40_RS11540 b3313a993267471dc9ed73ddd7fc4264 283 PANTHER PTHR30537:SF3 1 278 1.2E-51 T 23-04-2016 LT40_RS11540 b3313a993267471dc9ed73ddd7fc4264 283 Pfam PF03466 LysR substrate binding domain 90 275 1.6E-17 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS11540 b3313a993267471dc9ed73ddd7fc4264 283 SUPERFAMILY SSF46785 2 82 1.84E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11540 b3313a993267471dc9ed73ddd7fc4264 283 PANTHER PTHR30537 1 278 1.2E-51 T 23-04-2016 LT40_RS11540 b3313a993267471dc9ed73ddd7fc4264 283 SUPERFAMILY SSF53850 89 278 4.16E-24 T 23-04-2016 LT40_RS11540 b3313a993267471dc9ed73ddd7fc4264 283 Gene3D G3DSA:1.10.10.10 1 75 8.9E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS11540 b3313a993267471dc9ed73ddd7fc4264 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.2E-13 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS12035 072b562e21afb509e73474be1edec532 57 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 37 1.6E-5 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM LT40_RS12035 072b562e21afb509e73474be1edec532 57 SUPERFAMILY SSF143120 1 31 9.29E-6 T 23-04-2016 LT40_RS19885 cbfcaeb9b38e473c56a5b76f7ceb26aa 300 PANTHER PTHR11092 1 299 3.9E-131 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 LT40_RS19885 cbfcaeb9b38e473c56a5b76f7ceb26aa 300 Pfam PF08338 Domain of unknown function (DUF1731) 251 296 1.4E-14 T 23-04-2016 IPR013549 Domain of unknown function DUF1731 LT40_RS19885 cbfcaeb9b38e473c56a5b76f7ceb26aa 300 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 1.3E-105 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 LT40_RS19885 cbfcaeb9b38e473c56a5b76f7ceb26aa 300 Gene3D G3DSA:3.40.50.720 1 198 4.8E-18 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS19885 cbfcaeb9b38e473c56a5b76f7ceb26aa 300 Gene3D G3DSA:3.90.25.10 199 245 2.0E-5 T 23-04-2016 LT40_RS19885 cbfcaeb9b38e473c56a5b76f7ceb26aa 300 PANTHER PTHR11092:SF0 1 299 3.9E-131 T 23-04-2016 LT40_RS19885 cbfcaeb9b38e473c56a5b76f7ceb26aa 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 222 5.9E-22 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LT40_RS19885 cbfcaeb9b38e473c56a5b76f7ceb26aa 300 SUPERFAMILY SSF51735 1 262 1.33E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS20165 31946fa1416b857d08c5853c2d900353 500 PANTHER PTHR30203:SF3 19 475 6.3E-137 T 23-04-2016 LT40_RS20165 31946fa1416b857d08c5853c2d900353 500 Pfam PF02321 Outer membrane efflux protein 287 473 6.6E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS20165 31946fa1416b857d08c5853c2d900353 500 Pfam PF02321 Outer membrane efflux protein 71 263 5.2E-23 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS20165 31946fa1416b857d08c5853c2d900353 500 Gene3D G3DSA:1.20.1600.10 57 97 1.9E-86 T 23-04-2016 LT40_RS20165 31946fa1416b857d08c5853c2d900353 500 Gene3D G3DSA:1.20.1600.10 363 475 1.9E-86 T 23-04-2016 LT40_RS20165 31946fa1416b857d08c5853c2d900353 500 Gene3D G3DSA:1.20.1600.10 151 323 1.9E-86 T 23-04-2016 LT40_RS20165 31946fa1416b857d08c5853c2d900353 500 Gene3D G3DSA:2.20.200.10 324 361 4.1E-11 T 23-04-2016 LT40_RS20165 31946fa1416b857d08c5853c2d900353 500 Gene3D G3DSA:2.20.200.10 109 150 4.1E-11 T 23-04-2016 LT40_RS20165 31946fa1416b857d08c5853c2d900353 500 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 17 475 1.5E-105 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LT40_RS20165 31946fa1416b857d08c5853c2d900353 500 SUPERFAMILY SSF56954 12 477 1.44E-88 T 23-04-2016 LT40_RS20165 31946fa1416b857d08c5853c2d900353 500 PANTHER PTHR30203 19 475 6.3E-137 T 23-04-2016 LT40_RS10225 42b6c714eccaf9b4323b293d423d5268 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 264 18.042 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LT40_RS10225 42b6c714eccaf9b4323b293d423d5268 276 Pfam PF02673 Bacitracin resistance protein BacA 9 259 1.1E-79 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LT40_RS10225 42b6c714eccaf9b4323b293d423d5268 276 PANTHER PTHR30622 2 272 5.8E-138 T 23-04-2016 LT40_RS10225 42b6c714eccaf9b4323b293d423d5268 276 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 257 9.4E-80 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LT40_RS10225 42b6c714eccaf9b4323b293d423d5268 276 PANTHER PTHR30622:SF3 2 272 5.8E-138 T 23-04-2016 LT40_RS20695 9424d7da8dadbf4d5f58fa5c0573c001 133 PANTHER PTHR34309:SF4 1 132 2.3E-49 T 23-04-2016 LT40_RS20695 9424d7da8dadbf4d5f58fa5c0573c001 133 Pfam PF03928 Haem-degrading 9 129 1.9E-30 T 23-04-2016 IPR005624 Haem-degrading LT40_RS20695 9424d7da8dadbf4d5f58fa5c0573c001 133 PANTHER PTHR34309 1 132 2.3E-49 T 23-04-2016 LT40_RS20695 9424d7da8dadbf4d5f58fa5c0573c001 133 SUPERFAMILY SSF143744 3 132 4.84E-35 T 23-04-2016 LT40_RS02915 6e472b5c8b43261e9672b93fb9983f21 260 Gene3D G3DSA:3.40.50.360 1 234 5.5E-72 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS02915 6e472b5c8b43261e9672b93fb9983f21 260 PANTHER PTHR10204:SF46 1 238 1.8E-96 T 23-04-2016 LT40_RS02915 6e472b5c8b43261e9672b93fb9983f21 260 Pfam PF02525 Flavodoxin-like fold 1 213 3.6E-54 T 23-04-2016 IPR003680 Flavodoxin-like fold LT40_RS02915 6e472b5c8b43261e9672b93fb9983f21 260 PANTHER PTHR10204 1 238 1.8E-96 T 23-04-2016 LT40_RS02915 6e472b5c8b43261e9672b93fb9983f21 260 SUPERFAMILY SSF52218 1 256 1.37E-71 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 7.2E-23 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 7.2E-23 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 7.2E-23 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 7.2E-23 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 SUPERFAMILY SSF55920 4 254 7.07E-94 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 42.882 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 Pfam PF00557 Metallopeptidase family M24 12 241 6.1E-58 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 249 7.6E-102 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 PANTHER PTHR10804 1 258 9.6E-172 T 23-04-2016 LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 Gene3D G3DSA:3.90.230.10 4 256 2.0E-103 T 23-04-2016 IPR000994 Peptidase M24, structural domain LT40_RS00405 3d23b28e0221bca82158b0099d3e5c82 260 PANTHER PTHR10804:SF75 1 258 9.6E-172 T 23-04-2016 LT40_RS09450 4d220674eaae83f987b8888c6505769d 120 PANTHER PTHR24423 2 118 2.9E-29 T 23-04-2016 LT40_RS09450 4d220674eaae83f987b8888c6505769d 120 PANTHER PTHR24423:SF527 2 118 2.9E-29 T 23-04-2016 LT40_RS09450 4d220674eaae83f987b8888c6505769d 120 Pfam PF00072 Response regulator receiver domain 8 114 1.7E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09450 4d220674eaae83f987b8888c6505769d 120 SUPERFAMILY SSF52172 6 118 2.99E-27 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS09450 4d220674eaae83f987b8888c6505769d 120 SMART SM00448 6 114 2.0E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09450 4d220674eaae83f987b8888c6505769d 120 Gene3D G3DSA:3.40.50.2300 6 118 1.7E-28 T 23-04-2016 LT40_RS17410 ad9324f0d40c9a6ef6124e5ddb77a47b 480 PANTHER PTHR30624:SF10 13 480 4.7E-157 T 23-04-2016 LT40_RS17410 ad9324f0d40c9a6ef6124e5ddb77a47b 480 SUPERFAMILY SSF111283 5 475 1.12E-94 T 23-04-2016 LT40_RS17410 ad9324f0d40c9a6ef6124e5ddb77a47b 480 PANTHER PTHR30624 13 480 4.7E-157 T 23-04-2016 LT40_RS17410 ad9324f0d40c9a6ef6124e5ddb77a47b 480 Pfam PF01523 Putative modulator of DNA gyrase 23 325 5.7E-40 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS18520 cd317b7a7110edad2f99321671684c19 309 Gene3D G3DSA:3.40.50.720 4 171 6.0E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18520 cd317b7a7110edad2f99321671684c19 309 PANTHER PTHR10366 5 307 5.4E-94 T 23-04-2016 LT40_RS18520 cd317b7a7110edad2f99321671684c19 309 SUPERFAMILY SSF51735 4 307 1.7E-88 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18520 cd317b7a7110edad2f99321671684c19 309 PANTHER PTHR10366:SF466 5 307 5.4E-94 T 23-04-2016 LT40_RS18520 cd317b7a7110edad2f99321671684c19 309 Gene3D G3DSA:3.90.25.10 172 307 2.4E-28 T 23-04-2016 LT40_RS18520 cd317b7a7110edad2f99321671684c19 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 243 2.1E-63 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LT40_RS04820 953e671864de63fbcbced06c06b3ed67 259 PANTHER PTHR30035 2 259 3.5E-113 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS04820 953e671864de63fbcbced06c06b3ed67 259 PANTHER PTHR30035:SF2 2 259 3.5E-113 T 23-04-2016 LT40_RS04820 953e671864de63fbcbced06c06b3ed67 259 Pfam PF04333 MlaA lipoprotein 61 254 2.1E-66 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS04820 953e671864de63fbcbced06c06b3ed67 259 PRINTS PR01805 VacJ lipoprotein signature 79 95 5.3E-23 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS04820 953e671864de63fbcbced06c06b3ed67 259 PRINTS PR01805 VacJ lipoprotein signature 166 183 5.3E-23 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS04820 953e671864de63fbcbced06c06b3ed67 259 PRINTS PR01805 VacJ lipoprotein signature 62 75 5.3E-23 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS04820 953e671864de63fbcbced06c06b3ed67 259 PRINTS PR01805 VacJ lipoprotein signature 130 147 5.3E-23 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 LT40_RS00850 7d8b1e7e65a1fd61716156b1f2a78139 538 PIRSF PIRSF038984 1 536 8.5E-241 T 23-04-2016 IPR028348 FAD dependent protein LT40_RS00850 7d8b1e7e65a1fd61716156b1f2a78139 538 Gene3D G3DSA:3.50.50.60 101 289 6.3E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00850 7d8b1e7e65a1fd61716156b1f2a78139 538 Gene3D G3DSA:3.50.50.60 471 532 6.3E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00850 7d8b1e7e65a1fd61716156b1f2a78139 538 PANTHER PTHR10617:SF52 73 391 1.6E-165 T 23-04-2016 LT40_RS00850 7d8b1e7e65a1fd61716156b1f2a78139 538 PANTHER PTHR10617:SF52 471 533 1.6E-165 T 23-04-2016 LT40_RS00850 7d8b1e7e65a1fd61716156b1f2a78139 538 PANTHER PTHR10617 73 391 1.6E-165 T 23-04-2016 LT40_RS00850 7d8b1e7e65a1fd61716156b1f2a78139 538 PANTHER PTHR10617 471 533 1.6E-165 T 23-04-2016 LT40_RS00850 7d8b1e7e65a1fd61716156b1f2a78139 538 SUPERFAMILY SSF51905 101 287 3.89E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00850 7d8b1e7e65a1fd61716156b1f2a78139 538 SUPERFAMILY SSF51905 480 530 3.89E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS11300 556272a341e97145aba8ef7ef45e1414 120 SUPERFAMILY SSF54736 35 118 2.46E-31 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LT40_RS11300 556272a341e97145aba8ef7ef45e1414 120 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 37 115 9.5E-34 T 23-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 LT40_RS11300 556272a341e97145aba8ef7ef45e1414 120 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 14 114 28.716 T 23-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS LT40_RS11300 556272a341e97145aba8ef7ef45e1414 120 Gene3D G3DSA:3.30.1390.10 20 119 3.0E-42 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LT40_RS11300 556272a341e97145aba8ef7ef45e1414 120 PANTHER PTHR33473 8 120 1.1E-38 T 23-04-2016 LT40_RS13710 60ed38eb944836260ad6f48098148bfa 794 PANTHER PTHR33490 3 343 1.3E-153 T 23-04-2016 LT40_RS13710 60ed38eb944836260ad6f48098148bfa 794 Gene3D G3DSA:3.90.260.10 177 248 1.4E-10 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS13710 60ed38eb944836260ad6f48098148bfa 794 SMART SM00460 172 248 3.2E-19 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS13710 60ed38eb944836260ad6f48098148bfa 794 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 356 787 6.4E-172 T 23-04-2016 IPR018667 Domain of unknown function DUF2126 LT40_RS13710 60ed38eb944836260ad6f48098148bfa 794 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 343 3.2E-20 T 23-04-2016 IPR018667 Domain of unknown function DUF2126 LT40_RS13710 60ed38eb944836260ad6f48098148bfa 794 Pfam PF01841 Transglutaminase-like superfamily 134 246 1.3E-19 T 23-04-2016 IPR002931 Transglutaminase-like LT40_RS13710 60ed38eb944836260ad6f48098148bfa 794 SUPERFAMILY SSF54001 8 337 2.52E-69 T 23-04-2016 LT40_RS13710 60ed38eb944836260ad6f48098148bfa 794 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 84 4.4E-27 T 23-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal LT40_RS13710 60ed38eb944836260ad6f48098148bfa 794 PANTHER PTHR33490:SF1 3 343 1.3E-153 T 23-04-2016 LT40_RS19315 c4d5ca9a3616ed08624e5e20d93b8f2a 411 Pfam PF07687 Peptidase dimerisation domain 208 306 1.2E-18 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS19315 c4d5ca9a3616ed08624e5e20d93b8f2a 411 Pfam PF01546 Peptidase family M20/M25/M40 106 404 4.7E-31 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LT40_RS19315 c4d5ca9a3616ed08624e5e20d93b8f2a 411 SUPERFAMILY SSF55031 211 322 7.33E-21 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS19315 c4d5ca9a3616ed08624e5e20d93b8f2a 411 PANTHER PTHR11014 23 411 2.7E-150 T 23-04-2016 LT40_RS19315 c4d5ca9a3616ed08624e5e20d93b8f2a 411 Gene3D G3DSA:3.30.70.360 212 315 1.4E-26 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS19315 c4d5ca9a3616ed08624e5e20d93b8f2a 411 SUPERFAMILY SSF53187 30 219 5.71E-51 T 23-04-2016 LT40_RS19315 c4d5ca9a3616ed08624e5e20d93b8f2a 411 SUPERFAMILY SSF53187 331 408 5.71E-51 T 23-04-2016 LT40_RS19315 c4d5ca9a3616ed08624e5e20d93b8f2a 411 Gene3D G3DSA:3.40.630.10 320 408 3.0E-51 T 23-04-2016 LT40_RS19315 c4d5ca9a3616ed08624e5e20d93b8f2a 411 Gene3D G3DSA:3.40.630.10 30 211 3.0E-51 T 23-04-2016 LT40_RS19315 c4d5ca9a3616ed08624e5e20d93b8f2a 411 PANTHER PTHR11014:SF64 23 411 2.7E-150 T 23-04-2016 LT40_RS19315 c4d5ca9a3616ed08624e5e20d93b8f2a 411 PIRSF PIRSF037238 28 409 1.1E-101 T 23-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase LT40_RS17720 8b25935760bfd59199dcb5dd8b587501 1229 SUPERFAMILY SSF49373 1082 1135 5.89E-9 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments LT40_RS17720 8b25935760bfd59199dcb5dd8b587501 1229 Gene3D G3DSA:2.60.40.1080 1081 1135 6.6E-10 T 23-04-2016 LT40_RS09840 4de317593f9b7937405b89825e43a00b 338 SMART SM00354 11 81 8.1E-17 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS09840 4de317593f9b7937405b89825e43a00b 338 PANTHER PTHR30146:SF2 11 337 2.9E-134 T 23-04-2016 LT40_RS09840 4de317593f9b7937405b89825e43a00b 338 Gene3D G3DSA:3.40.50.2300 179 338 3.4E-44 T 23-04-2016 LT40_RS09840 4de317593f9b7937405b89825e43a00b 338 Pfam PF13377 Periplasmic binding protein-like domain 178 338 1.4E-26 T 23-04-2016 LT40_RS09840 4de317593f9b7937405b89825e43a00b 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 58 4.9E-11 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS09840 4de317593f9b7937405b89825e43a00b 338 Gene3D G3DSA:3.40.50.2300 68 178 3.3E-29 T 23-04-2016 LT40_RS09840 4de317593f9b7937405b89825e43a00b 338 SUPERFAMILY SSF47413 11 69 3.7E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS09840 4de317593f9b7937405b89825e43a00b 338 PANTHER PTHR30146 11 337 2.9E-134 T 23-04-2016 LT40_RS09840 4de317593f9b7937405b89825e43a00b 338 Gene3D G3DSA:1.10.260.40 12 66 1.7E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS09840 4de317593f9b7937405b89825e43a00b 338 SUPERFAMILY SSF53822 70 336 2.54E-52 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 Gene3D G3DSA:3.10.580.10 51 191 1.0E-21 T 23-04-2016 LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 SUPERFAMILY SSF54631 60 198 6.06E-33 T 23-04-2016 LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 SMART SM01091 200 278 4.0E-27 T 23-04-2016 IPR005170 Transporter-associated domain LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 Pfam PF00571 CBS domain 136 184 1.0E-5 T 23-04-2016 IPR000644 CBS domain LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 Pfam PF00571 CBS domain 63 118 4.4E-6 T 23-04-2016 IPR000644 CBS domain LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 SUPERFAMILY SSF56176 198 277 1.28E-21 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 PANTHER PTHR22777:SF17 15 279 8.4E-115 T 23-04-2016 LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 Gene3D G3DSA:3.30.465.10 192 277 1.9E-26 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 Pfam PF03471 Transporter associated domain 202 276 2.6E-19 T 23-04-2016 IPR005170 Transporter-associated domain LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 SMART SM00116 136 184 1.5 T 23-04-2016 IPR000644 CBS domain LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 SMART SM00116 72 121 1.5 T 23-04-2016 IPR000644 CBS domain LT40_RS18885 23bab1c9555eef3c83abe826c102198a 279 PANTHER PTHR22777 15 279 8.4E-115 T 23-04-2016 LT40_RS07895 d18470d8ef046486cbaead8f774c9683 304 PANTHER PTHR30537 1 297 1.5E-162 T 23-04-2016 LT40_RS07895 d18470d8ef046486cbaead8f774c9683 304 PANTHER PTHR30537:SF17 1 297 1.5E-162 T 23-04-2016 LT40_RS07895 d18470d8ef046486cbaead8f774c9683 304 SUPERFAMILY SSF46785 4 112 7.62E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07895 d18470d8ef046486cbaead8f774c9683 304 Pfam PF03466 LysR substrate binding domain 90 295 4.1E-43 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS07895 d18470d8ef046486cbaead8f774c9683 304 Gene3D G3DSA:3.40.190.10 92 172 2.6E-26 T 23-04-2016 LT40_RS07895 d18470d8ef046486cbaead8f774c9683 304 Gene3D G3DSA:1.10.10.10 4 85 7.7E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07895 d18470d8ef046486cbaead8f774c9683 304 Gene3D G3DSA:3.40.190.10 173 264 1.7E-18 T 23-04-2016 LT40_RS07895 d18470d8ef046486cbaead8f774c9683 304 SUPERFAMILY SSF53850 90 297 2.71E-45 T 23-04-2016 LT40_RS07895 d18470d8ef046486cbaead8f774c9683 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.8E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS07790 1d8160ba5cae1371ff56594995109a1d 139 Gene3D G3DSA:1.20.20.10 18 54 6.6E-4 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 LT40_RS15340 ea7681bb9a16899803dd92d711243d30 193 SUPERFAMILY SSF53474 9 178 5.73E-32 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS15340 ea7681bb9a16899803dd92d711243d30 193 Pfam PF06821 Serine hydrolase 8 179 1.1E-67 T 23-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- LT40_RS15340 ea7681bb9a16899803dd92d711243d30 193 Gene3D G3DSA:3.40.50.1820 6 182 3.7E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS16385 26d5af75264f7d5f955bf87dea3602b8 298 PANTHER PTHR21666:SF204 48 295 1.6E-48 T 23-04-2016 LT40_RS16385 26d5af75264f7d5f955bf87dea3602b8 298 SUPERFAMILY SSF51261 169 271 8.89E-30 T 23-04-2016 IPR011055 Duplicated hybrid motif LT40_RS16385 26d5af75264f7d5f955bf87dea3602b8 298 Gene3D G3DSA:2.70.70.10 139 271 2.3E-32 T 23-04-2016 LT40_RS16385 26d5af75264f7d5f955bf87dea3602b8 298 PANTHER PTHR21666 48 295 1.6E-48 T 23-04-2016 LT40_RS16385 26d5af75264f7d5f955bf87dea3602b8 298 Pfam PF01551 Peptidase family M23 177 271 2.0E-24 T 23-04-2016 IPR016047 Peptidase M23 LT40_RS16385 26d5af75264f7d5f955bf87dea3602b8 298 Pfam PF13511 Domain of unknown function (DUF4124) 11 44 3.1E-9 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 LT40_RS03545 fd966a6c6644d31603fe4fbbf372142d 369 SUPERFAMILY SSF51717 15 174 7.53E-11 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 LT40_RS03545 fd966a6c6644d31603fe4fbbf372142d 369 PANTHER PTHR30454 1 369 5.2E-214 T 23-04-2016 LT40_RS03545 fd966a6c6644d31603fe4fbbf372142d 369 Gene3D G3DSA:3.20.20.70 27 132 2.7E-11 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS03545 fd966a6c6644d31603fe4fbbf372142d 369 PIRSF PIRSF004640 1 362 8.3E-149 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 LT40_RS03545 fd966a6c6644d31603fe4fbbf372142d 369 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.564 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 LT40_RS03545 fd966a6c6644d31603fe4fbbf372142d 369 SUPERFAMILY SSF56014 265 352 5.23E-12 T 23-04-2016 LT40_RS03545 fd966a6c6644d31603fe4fbbf372142d 369 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 4.7E-131 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 LT40_RS03545 fd966a6c6644d31603fe4fbbf372142d 369 Pfam PF04551 GcpE protein 13 352 2.4E-136 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 LT40_RS05635 070489158b3bc6c733bceb39a6766ddd 280 Gene3D G3DSA:1.10.3720.10 14 275 1.5E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05635 070489158b3bc6c733bceb39a6766ddd 280 PANTHER PTHR30193 6 280 7.4E-75 T 23-04-2016 LT40_RS05635 070489158b3bc6c733bceb39a6766ddd 280 SUPERFAMILY SSF161098 7 276 1.57E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05635 070489158b3bc6c733bceb39a6766ddd 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 273 4.5E-10 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05635 070489158b3bc6c733bceb39a6766ddd 280 PANTHER PTHR30193:SF20 6 280 7.4E-75 T 23-04-2016 LT40_RS07835 103102dd111e9ef287299dfce6d6762f 199 ProDom PD128471 PLASMID Y4YQ BLL1803 TRANSMEMBRANE MLR6347 MEMBRANE ID195 86 190 4.0E-17 T 23-04-2016 LT40_RS07835 103102dd111e9ef287299dfce6d6762f 199 Pfam PF16693 Inner membrane component of T3SS, periplasmic domain 78 197 1.8E-9 T 23-04-2016 IPR032034 Yop protein translocation protein D, periplasmic domain LT40_RS11035 9715707791a416dbec94c43fd712115a 520 SUPERFAMILY SSF53756 42 511 1.54E-105 T 23-04-2016 LT40_RS11035 9715707791a416dbec94c43fd712115a 520 PANTHER PTHR12526:SF295 43 511 1.5E-183 T 23-04-2016 LT40_RS11035 9715707791a416dbec94c43fd712115a 520 Pfam PF08323 Starch synthase catalytic domain 43 277 3.1E-70 T 23-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 LT40_RS11035 9715707791a416dbec94c43fd712115a 520 PANTHER PTHR12526 43 511 1.5E-183 T 23-04-2016 LT40_RS11035 9715707791a416dbec94c43fd712115a 520 Gene3D G3DSA:3.40.50.2000 294 491 8.5E-63 T 23-04-2016 LT40_RS11035 9715707791a416dbec94c43fd712115a 520 Pfam PF00534 Glycosyl transferases group 1 333 470 4.1E-13 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS11035 9715707791a416dbec94c43fd712115a 520 Hamap MF_00484 Glycogen synthase [glgA]. 42 509 40.038 T 23-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 LT40_RS11035 9715707791a416dbec94c43fd712115a 520 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 43 508 1.8E-145 T 23-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 LT40_RS13115 3b948d3069070d7f20663bbdeb373b62 444 PANTHER PTHR13847:SF44 12 440 3.2E-62 T 23-04-2016 LT40_RS13115 3b948d3069070d7f20663bbdeb373b62 444 Pfam PF01266 FAD dependent oxidoreductase 20 414 2.6E-65 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS13115 3b948d3069070d7f20663bbdeb373b62 444 PANTHER PTHR13847 12 440 3.2E-62 T 23-04-2016 LT40_RS13115 3b948d3069070d7f20663bbdeb373b62 444 Gene3D G3DSA:3.30.9.10 100 153 1.4E-11 T 23-04-2016 LT40_RS13115 3b948d3069070d7f20663bbdeb373b62 444 Gene3D G3DSA:3.30.9.10 233 374 1.4E-11 T 23-04-2016 LT40_RS13115 3b948d3069070d7f20663bbdeb373b62 444 Gene3D G3DSA:3.50.50.60 13 95 1.9E-70 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS13115 3b948d3069070d7f20663bbdeb373b62 444 Gene3D G3DSA:3.50.50.60 154 232 1.9E-70 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS13115 3b948d3069070d7f20663bbdeb373b62 444 Gene3D G3DSA:3.50.50.60 375 435 1.9E-70 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS13115 3b948d3069070d7f20663bbdeb373b62 444 SUPERFAMILY SSF51905 19 233 1.23E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS13115 3b948d3069070d7f20663bbdeb373b62 444 SUPERFAMILY SSF51905 375 433 1.23E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17090 27929c7ffa040dbf6bd89a538ef5ea8d 303 SUPERFAMILY SSF50956 16 302 1.44E-36 T 23-04-2016 LT40_RS17090 27929c7ffa040dbf6bd89a538ef5ea8d 303 Gene3D G3DSA:2.120.10.30 76 293 3.1E-14 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS17090 27929c7ffa040dbf6bd89a538ef5ea8d 303 Pfam PF06977 SdiA-regulated 56 301 3.1E-90 T 23-04-2016 IPR009722 SdiA-regulated LT40_RS13675 c5205546336edfc0474e34766a9ec5a5 434 Pfam PF02653 Branched-chain amino acid transport system / permease component 119 404 7.1E-48 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS13675 c5205546336edfc0474e34766a9ec5a5 434 Pfam PF11862 Domain of unknown function (DUF3382) 14 111 7.4E-20 T 23-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal LT40_RS13675 c5205546336edfc0474e34766a9ec5a5 434 PANTHER PTHR30482 68 427 2.3E-175 T 23-04-2016 LT40_RS13675 c5205546336edfc0474e34766a9ec5a5 434 PANTHER PTHR30482:SF9 68 427 2.3E-175 T 23-04-2016 LT40_RS11955 c5a50e2cbb5a751103b8a1211eeb5f4d 399 Pfam PF07786 Protein of unknown function (DUF1624) 26 233 3.3E-12 T 23-04-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78 LT40_RS11955 c5a50e2cbb5a751103b8a1211eeb5f4d 399 PANTHER PTHR40407 23 399 3.5E-77 T 23-04-2016 LT40_RS09060 b9bc405a9288aaf84d22b29a4336b744 481 SUPERFAMILY SSF53448 1 288 2.18E-64 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09060 b9bc405a9288aaf84d22b29a4336b744 481 Gene3D G3DSA:3.90.550.10 2 279 2.9E-86 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09060 b9bc405a9288aaf84d22b29a4336b744 481 PANTHER PTHR12526 360 479 2.4E-150 T 23-04-2016 LT40_RS09060 b9bc405a9288aaf84d22b29a4336b744 481 PANTHER PTHR12526 157 297 2.4E-150 T 23-04-2016 LT40_RS09060 b9bc405a9288aaf84d22b29a4336b744 481 SUPERFAMILY SSF51182 189 477 8.9E-79 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS09060 b9bc405a9288aaf84d22b29a4336b744 481 Pfam PF00483 Nucleotidyl transferase 5 295 5.4E-59 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 LT40_RS09060 b9bc405a9288aaf84d22b29a4336b744 481 Gene3D G3DSA:2.60.120.10 365 479 1.8E-41 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS09060 b9bc405a9288aaf84d22b29a4336b744 481 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3 477 7.8E-178 T 23-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 LT40_RS09060 b9bc405a9288aaf84d22b29a4336b744 481 Pfam PF01050 Mannose-6-phosphate isomerase 323 473 1.0E-66 T 23-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 LT40_RS09060 b9bc405a9288aaf84d22b29a4336b744 481 PANTHER PTHR12526:SF357 360 479 2.4E-150 T 23-04-2016 LT40_RS09060 b9bc405a9288aaf84d22b29a4336b744 481 PANTHER PTHR12526:SF357 157 297 2.4E-150 T 23-04-2016 LT40_RS03520 9bcac4cf18fcc0024e5fe0fd52add8fd 66 PANTHER PTHR37532 1 64 1.1E-16 T 23-04-2016 LT40_RS03520 9bcac4cf18fcc0024e5fe0fd52add8fd 66 Pfam PF04384 Iron-sulphur cluster assembly 5 64 1.5E-23 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 LT40_RS03520 9bcac4cf18fcc0024e5fe0fd52add8fd 66 SUPERFAMILY SSF140319 4 64 7.85E-21 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 LT40_RS03520 9bcac4cf18fcc0024e5fe0fd52add8fd 66 Gene3D G3DSA:1.10.10.600 2 64 6.1E-25 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 LT40_RS03520 9bcac4cf18fcc0024e5fe0fd52add8fd 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 5 65 4.5E-27 T 23-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 LT40_RS13865 ed6a35660d6f4977fd26c70bfbb3f1cb 231 Pfam PF03473 MOSC domain 49 163 1.1E-26 T 23-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 LT40_RS13865 ed6a35660d6f4977fd26c70bfbb3f1cb 231 Pfam PF03475 3-alpha domain 173 215 9.4E-13 T 23-04-2016 IPR005163 3-alpha domain LT40_RS13865 ed6a35660d6f4977fd26c70bfbb3f1cb 231 Gene3D G3DSA:2.40.33.20 4 227 1.6E-86 T 23-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like LT40_RS13865 ed6a35660d6f4977fd26c70bfbb3f1cb 231 PANTHER PTHR30212:SF2 24 226 1.1E-78 T 23-04-2016 LT40_RS13865 ed6a35660d6f4977fd26c70bfbb3f1cb 231 PANTHER PTHR30212 24 226 1.1E-78 T 23-04-2016 LT40_RS13865 ed6a35660d6f4977fd26c70bfbb3f1cb 231 SUPERFAMILY SSF50800 6 227 1.05E-72 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain LT40_RS05765 84ad098bdbd868e7112bfce4fc094f88 484 PIRSF PIRSF006247 1 484 2.9E-169 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 LT40_RS05765 84ad098bdbd868e7112bfce4fc094f88 484 PANTHER PTHR32024:SF3 3 483 1.1E-286 T 23-04-2016 LT40_RS05765 84ad098bdbd868e7112bfce4fc094f88 484 PANTHER PTHR32024 3 483 1.1E-286 T 23-04-2016 LT40_RS05765 84ad098bdbd868e7112bfce4fc094f88 484 Pfam PF02386 Cation transport protein 41 477 6.8E-57 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 LT40_RS00320 0d7320043b14d2f9b7e3987010269152 311 Gene3D G3DSA:3.40.50.720 97 276 1.6E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS00320 0d7320043b14d2f9b7e3987010269152 311 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 276 1.4E-41 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LT40_RS00320 0d7320043b14d2f9b7e3987010269152 311 PANTHER PTHR10996:SF148 45 309 4.5E-98 T 23-04-2016 LT40_RS00320 0d7320043b14d2f9b7e3987010269152 311 PANTHER PTHR10996 45 309 4.5E-98 T 23-04-2016 LT40_RS00320 0d7320043b14d2f9b7e3987010269152 311 SUPERFAMILY SSF51735 98 277 7.77E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17695 35d9b42a64d756425610acb99865f7fd 250 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 23 223 4.3E-54 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 LT40_RS17695 35d9b42a64d756425610acb99865f7fd 250 PIRSF PIRSF026326 3 233 5.1E-67 T 23-04-2016 IPR027023 Putative lipopolysaccharide kinase InaA LT40_RS17695 35d9b42a64d756425610acb99865f7fd 250 SUPERFAMILY SSF56112 34 223 1.28E-12 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS17710 180e9512eb2579f138174dee5e87a607 329 PANTHER PTHR37465 1 104 1.6E-16 T 23-04-2016 LT40_RS17710 180e9512eb2579f138174dee5e87a607 329 PANTHER PTHR37465:SF1 1 104 1.6E-16 T 23-04-2016 LT40_RS17710 180e9512eb2579f138174dee5e87a607 329 Pfam PF15607 Bacterial toxin 44 185 277 6.6E-10 T 23-04-2016 IPR028946 Bacterial toxin 44 LT40_RS17710 180e9512eb2579f138174dee5e87a607 329 Pfam PF05488 PAAR motif 10 77 7.5E-9 T 23-04-2016 IPR008727 PAAR motif LT40_RS06120 914a455cb0f6cd0d39a35dac806d31b6 223 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 6 214 4.1E-51 T 23-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 LT40_RS06120 914a455cb0f6cd0d39a35dac806d31b6 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 72 184 1.2E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS06120 914a455cb0f6cd0d39a35dac806d31b6 223 PANTHER PTHR18901:SF24 1 217 6.4E-98 T 23-04-2016 LT40_RS06120 914a455cb0f6cd0d39a35dac806d31b6 223 PANTHER PTHR18901 1 217 6.4E-98 T 23-04-2016 LT40_RS06120 914a455cb0f6cd0d39a35dac806d31b6 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 186 1.3E-31 T 23-04-2016 IPR023214 HAD-like domain LT40_RS06120 914a455cb0f6cd0d39a35dac806d31b6 223 Gene3D G3DSA:1.10.150.240 21 83 1.6E-8 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LT40_RS06120 914a455cb0f6cd0d39a35dac806d31b6 223 SUPERFAMILY SSF56784 3 217 9.65E-57 T 23-04-2016 IPR023214 HAD-like domain LT40_RS06120 914a455cb0f6cd0d39a35dac806d31b6 223 Gene3D G3DSA:3.40.50.1000 88 218 3.5E-40 T 23-04-2016 IPR023214 HAD-like domain LT40_RS06120 914a455cb0f6cd0d39a35dac806d31b6 223 Gene3D G3DSA:3.40.50.1000 2 20 3.5E-40 T 23-04-2016 IPR023214 HAD-like domain LT40_RS06120 914a455cb0f6cd0d39a35dac806d31b6 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 78 180 1.8E-11 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 Gene3D G3DSA:3.40.50.1820 3 292 4.9E-53 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 PRINTS PR00412 Epoxide hydrolase signature 110 123 7.5E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 PRINTS PR00412 Epoxide hydrolase signature 270 292 7.5E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 PRINTS PR00412 Epoxide hydrolase signature 96 109 7.5E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 PRINTS PR00412 Epoxide hydrolase signature 48 63 7.5E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 PRINTS PR00412 Epoxide hydrolase signature 28 46 7.5E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 PRINTS PR00412 Epoxide hydrolase signature 236 252 7.5E-14 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 PANTHER PTHR10992 154 295 2.1E-85 T 23-04-2016 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 PANTHER PTHR10992 2 134 2.1E-85 T 23-04-2016 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 Pfam PF00561 alpha/beta hydrolase fold 22 277 7.9E-19 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 PANTHER PTHR10992:SF764 154 295 2.1E-85 T 23-04-2016 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 PANTHER PTHR10992:SF764 2 134 2.1E-85 T 23-04-2016 LT40_RS07635 c90cd77b23a1ee00829da8d6a654d408 295 SUPERFAMILY SSF53474 2 293 1.88E-54 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS18820 487c5be7bd7744fd03c0e53489dce8f2 339 Pfam PF05036 Sporulation related domain 262 328 1.1E-12 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS18820 487c5be7bd7744fd03c0e53489dce8f2 339 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 105 214 7.7E-43 T 23-04-2016 IPR012997 Rare lipoprotein A LT40_RS18820 487c5be7bd7744fd03c0e53489dce8f2 339 PANTHER PTHR34183 6 339 2.8E-114 T 23-04-2016 LT40_RS18820 487c5be7bd7744fd03c0e53489dce8f2 339 PANTHER PTHR34183:SF1 6 339 2.8E-114 T 23-04-2016 LT40_RS18820 487c5be7bd7744fd03c0e53489dce8f2 339 Gene3D G3DSA:3.30.70.1070 259 330 5.0E-13 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS18820 487c5be7bd7744fd03c0e53489dce8f2 339 Pfam PF03330 Lytic transglycolase 103 192 4.0E-25 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LT40_RS18820 487c5be7bd7744fd03c0e53489dce8f2 339 SUPERFAMILY SSF50685 102 190 5.86E-10 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain LT40_RS18820 487c5be7bd7744fd03c0e53489dce8f2 339 SUPERFAMILY SSF110997 262 329 2.35E-12 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS14620 49312528eaadf88f6385d92ec72a2765 206 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 2 195 6.2E-92 T 23-04-2016 IPR010743 Methionine biosynthesis MetW LT40_RS14620 49312528eaadf88f6385d92ec72a2765 206 Gene3D G3DSA:3.40.50.150 9 160 8.0E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14620 49312528eaadf88f6385d92ec72a2765 206 PANTHER PTHR10108:SF831 1 163 5.8E-78 T 23-04-2016 LT40_RS14620 49312528eaadf88f6385d92ec72a2765 206 Pfam PF07021 Methionine biosynthesis protein MetW 2 194 9.5E-94 T 23-04-2016 IPR010743 Methionine biosynthesis MetW LT40_RS14620 49312528eaadf88f6385d92ec72a2765 206 PANTHER PTHR10108 1 163 5.8E-78 T 23-04-2016 LT40_RS14620 49312528eaadf88f6385d92ec72a2765 206 SUPERFAMILY SSF53335 3 187 1.76E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS00545 bd41bbf949e3bf447c956ee46413be4a 352 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 342 27.443 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00545 bd41bbf949e3bf447c956ee46413be4a 352 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 23-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00545 bd41bbf949e3bf447c956ee46413be4a 352 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 20 170 2.8E-39 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00545 bd41bbf949e3bf447c956ee46413be4a 352 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 190 337 9.6E-14 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00545 bd41bbf949e3bf447c956ee46413be4a 352 PANTHER PTHR13326 11 340 2.5E-56 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS00545 bd41bbf949e3bf447c956ee46413be4a 352 SUPERFAMILY SSF55120 11 339 2.59E-91 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS13975 b0c7497a7eb25326ddd0ba91103c8f87 271 PANTHER PTHR12905 8 33 1.9E-77 T 23-04-2016 LT40_RS13975 b0c7497a7eb25326ddd0ba91103c8f87 271 PANTHER PTHR12905:SF7 8 33 1.9E-77 T 23-04-2016 LT40_RS13975 b0c7497a7eb25326ddd0ba91103c8f87 271 Pfam PF00149 Calcineurin-like phosphoesterase 16 202 3.1E-11 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LT40_RS13975 b0c7497a7eb25326ddd0ba91103c8f87 271 Gene3D G3DSA:3.60.21.10 14 248 1.2E-28 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS13975 b0c7497a7eb25326ddd0ba91103c8f87 271 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 202 257 2.0E-17 T 23-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 LT40_RS13975 b0c7497a7eb25326ddd0ba91103c8f87 271 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 257 38.707 T 23-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 LT40_RS13975 b0c7497a7eb25326ddd0ba91103c8f87 271 PANTHER PTHR12905:SF7 49 271 1.9E-77 T 23-04-2016 LT40_RS13975 b0c7497a7eb25326ddd0ba91103c8f87 271 SUPERFAMILY SSF56300 15 265 4.94E-54 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS13975 b0c7497a7eb25326ddd0ba91103c8f87 271 PANTHER PTHR12905 49 271 1.9E-77 T 23-04-2016 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 Pfam PF13721 SecD export protein N-terminal TM region 2 106 2.5E-33 T 23-04-2016 IPR027398 SecD export protein N-terminal TM domain LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 621 49.527 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 344 601 4.7E-68 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 Pfam PF07549 SecD/SecF GG Motif 118 143 1.3E-6 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 PANTHER PTHR30081:SF1 1 176 1.3E-201 T 23-04-2016 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 PANTHER PTHR30081:SF1 312 384 1.3E-201 T 23-04-2016 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 PANTHER PTHR30081:SF1 403 620 1.3E-201 T 23-04-2016 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 PANTHER PTHR30081:SF1 229 287 1.3E-201 T 23-04-2016 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 Pfam PF02355 Protein export membrane protein 445 609 3.4E-16 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 SUPERFAMILY SSF82866 418 613 2.09E-42 T 23-04-2016 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 126 608 3.8E-131 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 Gene3D G3DSA:1.20.1640.10 456 613 3.8E-26 T 23-04-2016 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 PANTHER PTHR30081 1 176 1.3E-201 T 23-04-2016 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 PANTHER PTHR30081 312 384 1.3E-201 T 23-04-2016 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 PANTHER PTHR30081 403 620 1.3E-201 T 23-04-2016 LT40_RS03410 a30a64bed08d508f7ad8baaca81989cc 622 PANTHER PTHR30081 229 287 1.3E-201 T 23-04-2016 LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 PANTHER PTHR11606 1129 1374 0.0 T 23-04-2016 LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 PANTHER PTHR11606 676 1104 0.0 T 23-04-2016 LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 PANTHER PTHR11606 219 566 0.0 T 23-04-2016 LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 PANTHER PTHR11606 50 151 0.0 T 23-04-2016 LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 Gene3D G3DSA:3.40.50.720 949 1060 9.2E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 Gene3D G3DSA:3.40.50.720 1115 1187 9.2E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 77 1608 0.0 T 23-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 SUPERFAMILY SSF53223 762 963 5.56E-23 T 23-04-2016 LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 PANTHER PTHR11606:SF1 1129 1374 0.0 T 23-04-2016 LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 PANTHER PTHR11606:SF1 676 1104 0.0 T 23-04-2016 LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 PANTHER PTHR11606:SF1 219 566 0.0 T 23-04-2016 LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 PANTHER PTHR11606:SF1 50 151 0.0 T 23-04-2016 LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 SUPERFAMILY SSF51735 1090 1220 2.17E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 SUPERFAMILY SSF51735 952 1054 2.17E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06015 cdd5f190c6fb1b697b5baa4133382e1e 1619 PIRSF PIRSF036761 2 1614 0.0 T 23-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 LT40_RS09610 7c8c3cb337c0a0e96e784e41969eca05 687 Gene3D G3DSA:3.20.20.80 82 201 1.7E-14 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS09610 7c8c3cb337c0a0e96e784e41969eca05 687 Gene3D G3DSA:3.20.20.80 250 424 1.7E-14 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS09610 7c8c3cb337c0a0e96e784e41969eca05 687 SUPERFAMILY SSF51445 77 182 1.52E-35 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS09610 7c8c3cb337c0a0e96e784e41969eca05 687 SUPERFAMILY SSF51445 491 553 1.52E-35 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS09610 7c8c3cb337c0a0e96e784e41969eca05 687 SUPERFAMILY SSF51445 225 450 1.52E-35 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS09610 7c8c3cb337c0a0e96e784e41969eca05 687 TIGRFAM TIGR02455 TreS_stutzeri: trehalose synthase 1 686 0.0 T 23-04-2016 IPR012665 Trehalose synthase LT40_RS09610 7c8c3cb337c0a0e96e784e41969eca05 687 Pfam PF00128 Alpha amylase, catalytic domain 121 290 2.1E-4 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LT40_RS09850 213dec3f47a891b04cdacf400b0c1acf 350 SUPERFAMILY SSF51735 149 313 1.64E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09850 213dec3f47a891b04cdacf400b0c1acf 350 Gene3D G3DSA:3.90.180.10 5 180 1.5E-62 T 23-04-2016 IPR011032 GroES-like LT40_RS09850 213dec3f47a891b04cdacf400b0c1acf 350 Pfam PF00107 Zinc-binding dehydrogenase 186 309 4.6E-19 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LT40_RS09850 213dec3f47a891b04cdacf400b0c1acf 350 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LT40_RS09850 213dec3f47a891b04cdacf400b0c1acf 350 SUPERFAMILY SSF50129 10 175 8.22E-51 T 23-04-2016 IPR011032 GroES-like LT40_RS09850 213dec3f47a891b04cdacf400b0c1acf 350 SMART SM00829 8 343 6.7E-7 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LT40_RS09850 213dec3f47a891b04cdacf400b0c1acf 350 PANTHER PTHR11695:SF582 16 346 1.6E-158 T 23-04-2016 LT40_RS09850 213dec3f47a891b04cdacf400b0c1acf 350 PANTHER PTHR11695 16 346 1.6E-158 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS09850 213dec3f47a891b04cdacf400b0c1acf 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 144 7.8E-27 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LT40_RS09850 213dec3f47a891b04cdacf400b0c1acf 350 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 206 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LT40_RS09850 213dec3f47a891b04cdacf400b0c1acf 350 Gene3D G3DSA:3.40.50.720 181 293 5.8E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS08030 38e6b0a5e41efc7fa06578deef8280da 394 PANTHER PTHR39441 9 343 1.3E-17 T 23-04-2016 LT40_RS08030 38e6b0a5e41efc7fa06578deef8280da 394 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 10 388 2.9E-85 T 23-04-2016 IPR018721 Protein of unknown function DUF2252 LT40_RS08030 38e6b0a5e41efc7fa06578deef8280da 394 Gene3D G3DSA:3.90.1200.10 46 159 1.5E-11 T 23-04-2016 LT40_RS08030 38e6b0a5e41efc7fa06578deef8280da 394 SUPERFAMILY SSF56112 14 141 1.8E-8 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS14295 4b4cec492fb95f7490d9e8a026fa21be 92 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 1 91 7.3E-41 T 23-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein LT40_RS14295 4b4cec492fb95f7490d9e8a026fa21be 92 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 4 90 2.7E-30 T 23-04-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein LT40_RS04155 2a8484d78acc8507ef9013e229a8d752 97 PANTHER PTHR10772 1 96 1.8E-40 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LT40_RS04155 2a8484d78acc8507ef9013e229a8d752 97 PRINTS PR00297 10kDa chaperonin signature 25 46 2.2E-31 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LT40_RS04155 2a8484d78acc8507ef9013e229a8d752 97 PRINTS PR00297 10kDa chaperonin signature 82 95 2.2E-31 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LT40_RS04155 2a8484d78acc8507ef9013e229a8d752 97 PRINTS PR00297 10kDa chaperonin signature 3 18 2.2E-31 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LT40_RS04155 2a8484d78acc8507ef9013e229a8d752 97 PRINTS PR00297 10kDa chaperonin signature 60 72 2.2E-31 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LT40_RS04155 2a8484d78acc8507ef9013e229a8d752 97 SMART SM00883 2 95 4.6E-55 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LT40_RS04155 2a8484d78acc8507ef9013e229a8d752 97 SUPERFAMILY SSF50129 1 96 5.65E-33 T 23-04-2016 IPR011032 GroES-like LT40_RS04155 2a8484d78acc8507ef9013e229a8d752 97 Gene3D G3DSA:2.30.33.40 1 96 1.5E-34 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LT40_RS04155 2a8484d78acc8507ef9013e229a8d752 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.8E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LT40_RS04155 2a8484d78acc8507ef9013e229a8d752 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 26.521 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LT40_RS04155 2a8484d78acc8507ef9013e229a8d752 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 LT40_RS10025 7bb0898b2b1bdd743f3ed9823aab0a59 189 Pfam PF05036 Sporulation related domain 111 181 1.2E-9 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS10025 7bb0898b2b1bdd743f3ed9823aab0a59 189 Gene3D G3DSA:3.30.70.1070 108 183 2.6E-9 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS10025 7bb0898b2b1bdd743f3ed9823aab0a59 189 SUPERFAMILY SSF110997 110 182 6.67E-10 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 LT40_RS10685 e32cc1e2876427c4ce74b3592087a9e4 134 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 17 114 1.0E-16 T 23-04-2016 IPR020358 Uncharacterised protein family Y4oB LT40_RS08395 3bf0a5bc5fedf785e627c2640d97fcf2 323 PANTHER PTHR18895 125 260 1.0E-24 T 23-04-2016 LT40_RS08395 3bf0a5bc5fedf785e627c2640d97fcf2 323 SUPERFAMILY SSF53335 123 263 9.26E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08395 3bf0a5bc5fedf785e627c2640d97fcf2 323 Gene3D G3DSA:3.40.50.150 124 267 4.2E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08395 3bf0a5bc5fedf785e627c2640d97fcf2 323 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 214 220 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LT40_RS08395 3bf0a5bc5fedf785e627c2640d97fcf2 323 Pfam PF05175 Methyltransferase small domain 136 260 7.1E-16 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 LT40_RS10160 fe1e49d65f0d0f66b4a343f8ce6c960e 351 Gene3D G3DSA:1.25.40.10 157 349 1.2E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS10160 fe1e49d65f0d0f66b4a343f8ce6c960e 351 Gene3D G3DSA:1.25.40.10 38 81 1.2E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS10160 fe1e49d65f0d0f66b4a343f8ce6c960e 351 SUPERFAMILY SSF48371 43 143 4.03E-6 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 LT40_RS10160 fe1e49d65f0d0f66b4a343f8ce6c960e 351 SUPERFAMILY SSF48452 156 313 1.52E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS15020 37ba822492fcf4e94263253b6659516b 363 Pfam PF14462 Prokaryotic E2 family E 241 357 4.8E-29 T 23-04-2016 IPR025701 Ubiquitin-conjugating enzyme, E2, family E LT40_RS15020 37ba822492fcf4e94263253b6659516b 363 Pfam PF14452 Multiubiquitin 21 81 2.2E-8 T 23-04-2016 IPR027802 Multi-ubiquitin domain LT40_RS15020 37ba822492fcf4e94263253b6659516b 363 Pfam PF14452 Multiubiquitin 90 153 2.2E-14 T 23-04-2016 IPR027802 Multi-ubiquitin domain LT40_RS11695 e8068030472074632cea9ff46c9ebb71 401 PANTHER PTHR11820:SF82 183 379 5.7E-75 T 23-04-2016 LT40_RS11695 e8068030472074632cea9ff46c9ebb71 401 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 224 366 3.8E-6 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS11695 e8068030472074632cea9ff46c9ebb71 401 PANTHER PTHR11820 183 379 5.7E-75 T 23-04-2016 LT40_RS11695 e8068030472074632cea9ff46c9ebb71 401 SUPERFAMILY SSF56529 162 368 1.11E-25 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS11695 e8068030472074632cea9ff46c9ebb71 401 Gene3D G3DSA:3.90.850.10 180 367 9.5E-22 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS02355 cc6088650545de38057aeaef40144c80 308 PANTHER PTHR34069 1 305 5.6E-60 T 23-04-2016 LT40_RS02355 cc6088650545de38057aeaef40144c80 308 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 221 305 5.5E-24 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LT40_RS02355 cc6088650545de38057aeaef40144c80 308 SUPERFAMILY SSF53901 6 306 5.55E-39 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS02355 cc6088650545de38057aeaef40144c80 308 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 185 4.3E-18 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LT40_RS02355 cc6088650545de38057aeaef40144c80 308 Gene3D G3DSA:3.40.47.10 2 160 8.7E-30 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS02355 cc6088650545de38057aeaef40144c80 308 PANTHER PTHR34069:SF2 1 305 5.6E-60 T 23-04-2016 LT40_RS02355 cc6088650545de38057aeaef40144c80 308 Gene3D G3DSA:3.40.47.10 161 305 2.7E-37 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 PANTHER PTHR30404 1 424 2.4E-117 T 23-04-2016 LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 173 391 8.4E-47 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 Gene3D G3DSA:3.40.630.40 171 268 5.2E-59 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 Gene3D G3DSA:3.40.630.40 319 395 5.2E-59 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 SUPERFAMILY SSF54106 419 462 2.22E-8 T 23-04-2016 IPR018392 LysM domain LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 SUPERFAMILY SSF53187 318 395 6.59E-54 T 23-04-2016 LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 SUPERFAMILY SSF53187 171 267 6.59E-54 T 23-04-2016 LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 SMART SM00646 233 391 8.9E-69 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 Pfam PF11741 AMIN domain 30 128 9.2E-24 T 23-04-2016 IPR021731 AMIN domain LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 Gene3D G3DSA:3.10.350.10 419 463 1.0E-12 T 23-04-2016 IPR018392 LysM domain LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 PANTHER PTHR30404:SF1 1 424 2.4E-117 T 23-04-2016 LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 Pfam PF01476 LysM domain 420 462 2.8E-9 T 23-04-2016 IPR018392 LysM domain LT40_RS13825 f8c51e1f55e06d4c22b4583a2d2a0bac 469 SMART SM00257 419 462 1.9E-10 T 23-04-2016 IPR018392 LysM domain LT40_RS08455 4b504b6aded93eec69152c0ac4515992 250 PANTHER PTHR34136 1 250 1.3E-38 T 23-04-2016 LT40_RS08455 4b504b6aded93eec69152c0ac4515992 250 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 58 222 7.2E-23 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 LT40_RS08455 4b504b6aded93eec69152c0ac4515992 250 PANTHER PTHR34136:SF1 1 250 1.3E-38 T 23-04-2016 LT40_RS08455 4b504b6aded93eec69152c0ac4515992 250 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 56 222 5.3E-38 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 LT40_RS13370 f993de5c567391e90fa6a4ba1adc33b2 249 Gene3D G3DSA:3.40.50.150 34 247 9.9E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS13370 f993de5c567391e90fa6a4ba1adc33b2 249 Pfam PF13649 Methyltransferase domain 45 129 1.8E-14 T 23-04-2016 LT40_RS13370 f993de5c567391e90fa6a4ba1adc33b2 249 PANTHER PTHR10108 34 156 1.8E-21 T 23-04-2016 LT40_RS13370 f993de5c567391e90fa6a4ba1adc33b2 249 SUPERFAMILY SSF53335 4 247 2.13E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS09400 5b57cdff075b1b9ad51eaea5d98e1fcf 172 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 14 170 3.2E-49 T 23-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 LT40_RS09400 5b57cdff075b1b9ad51eaea5d98e1fcf 172 ProSitePatterns PS00934 Glyoxalase I signature 1. 27 48 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 LT40_RS09400 5b57cdff075b1b9ad51eaea5d98e1fcf 172 PANTHER PTHR10374:SF16 11 169 1.3E-90 T 23-04-2016 LT40_RS09400 5b57cdff075b1b9ad51eaea5d98e1fcf 172 Gene3D G3DSA:3.10.180.10 10 170 5.9E-64 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS09400 5b57cdff075b1b9ad51eaea5d98e1fcf 172 PANTHER PTHR10374 11 169 1.3E-90 T 23-04-2016 LT40_RS09400 5b57cdff075b1b9ad51eaea5d98e1fcf 172 SUPERFAMILY SSF54593 23 170 6.44E-37 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS09400 5b57cdff075b1b9ad51eaea5d98e1fcf 172 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 25 167 6.0E-26 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LT40_RS09400 5b57cdff075b1b9ad51eaea5d98e1fcf 172 ProSitePatterns PS00935 Glyoxalase I signature 2. 111 127 - T 23-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 LT40_RS12370 61316216614b6572a4152fc1536413ac 278 PANTHER PTHR30151 23 276 1.3E-95 T 23-04-2016 LT40_RS12370 61316216614b6572a4152fc1536413ac 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 261 6.1E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS12370 61316216614b6572a4152fc1536413ac 278 PANTHER PTHR30151:SF8 23 276 1.3E-95 T 23-04-2016 LT40_RS12370 61316216614b6572a4152fc1536413ac 278 SUPERFAMILY SSF161098 70 250 2.75E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS12370 61316216614b6572a4152fc1536413ac 278 Gene3D G3DSA:1.10.3720.10 71 261 5.0E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS20325 8e7f000bc38ae9e1bb95641f27fa3519 393 Gene3D G3DSA:3.30.1490.20 123 198 2.7E-26 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS20325 8e7f000bc38ae9e1bb95641f27fa3519 393 PANTHER PTHR11609 1 382 4.5E-222 T 23-04-2016 LT40_RS20325 8e7f000bc38ae9e1bb95641f27fa3519 393 SUPERFAMILY SSF52440 3 112 2.59E-34 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS20325 8e7f000bc38ae9e1bb95641f27fa3519 393 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 392 2.9E-192 T 23-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 LT40_RS20325 8e7f000bc38ae9e1bb95641f27fa3519 393 Pfam PF02222 ATP-grasp domain 123 295 3.9E-54 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 LT40_RS20325 8e7f000bc38ae9e1bb95641f27fa3519 393 PANTHER PTHR11609:SF7 1 382 4.5E-222 T 23-04-2016 LT40_RS20325 8e7f000bc38ae9e1bb95641f27fa3519 393 Gene3D G3DSA:3.40.50.20 5 120 2.6E-39 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS20325 8e7f000bc38ae9e1bb95641f27fa3519 393 SUPERFAMILY SSF56059 120 385 4.86E-58 T 23-04-2016 LT40_RS20325 8e7f000bc38ae9e1bb95641f27fa3519 393 Gene3D G3DSA:3.30.470.20 199 389 2.1E-71 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS20325 8e7f000bc38ae9e1bb95641f27fa3519 393 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 392 53.093 T 23-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 LT40_RS16110 7b034395b5dcdc61f99605e8bfe7c0bd 178 SUPERFAMILY SSF47928 3 105 3.92E-25 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain LT40_RS16110 7b034395b5dcdc61f99605e8bfe7c0bd 178 Gene3D G3DSA:1.10.520.20 2 106 6.3E-32 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain LT40_RS16110 7b034395b5dcdc61f99605e8bfe7c0bd 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 178 18.926 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LT40_RS16110 7b034395b5dcdc61f99605e8bfe7c0bd 178 PANTHER PTHR11910 8 177 5.0E-50 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LT40_RS16110 7b034395b5dcdc61f99605e8bfe7c0bd 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 1.6E-22 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LT40_RS16110 7b034395b5dcdc61f99605e8bfe7c0bd 178 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.6E-22 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LT40_RS16110 7b034395b5dcdc61f99605e8bfe7c0bd 178 PRINTS PR00125 ATP synthase delta subunit signature 86 100 1.6E-22 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LT40_RS16110 7b034395b5dcdc61f99605e8bfe7c0bd 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 1.6E-22 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LT40_RS16110 7b034395b5dcdc61f99605e8bfe7c0bd 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 1.6E-22 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LT40_RS16110 7b034395b5dcdc61f99605e8bfe7c0bd 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 176 3.4E-49 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LT40_RS16110 7b034395b5dcdc61f99605e8bfe7c0bd 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 176 1.8E-53 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 Gene3D G3DSA:1.20.1600.10 143 314 5.2E-102 T 23-04-2016 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 Gene3D G3DSA:1.20.1600.10 53 91 5.2E-102 T 23-04-2016 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 Gene3D G3DSA:1.20.1600.10 352 466 5.2E-102 T 23-04-2016 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 PANTHER PTHR30203:SF15 4 468 3.2E-182 T 23-04-2016 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 Pfam PF02321 Outer membrane efflux protein 281 463 2.2E-28 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 Pfam PF02321 Outer membrane efflux protein 65 255 1.4E-26 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 PANTHER PTHR30203 4 468 3.2E-182 T 23-04-2016 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 SUPERFAMILY SSF56954 3 30 8.24E-118 T 23-04-2016 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 SUPERFAMILY SSF56954 56 467 8.24E-118 T 23-04-2016 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 465 3.2E-144 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 Gene3D G3DSA:2.20.200.10 101 142 5.7E-25 T 23-04-2016 LT40_RS04375 1459cac1b509ada9b252400592a4d193 484 Gene3D G3DSA:2.20.200.10 315 350 5.7E-25 T 23-04-2016 LT40_RS05985 210aed9d48ca9d39e3cb2dc29c2d3f06 579 Pfam PF00515 Tetratricopeptide repeat 407 436 6.7E-8 T 23-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 LT40_RS05985 210aed9d48ca9d39e3cb2dc29c2d3f06 579 SMART SM00028 404 437 1.7E-6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS05985 210aed9d48ca9d39e3cb2dc29c2d3f06 579 PANTHER PTHR22550 1 521 3.5E-73 T 23-04-2016 LT40_RS05985 210aed9d48ca9d39e3cb2dc29c2d3f06 579 Gene3D G3DSA:1.25.40.10 541 575 5.4E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS05985 210aed9d48ca9d39e3cb2dc29c2d3f06 579 Gene3D G3DSA:1.25.40.10 381 453 5.4E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS05985 210aed9d48ca9d39e3cb2dc29c2d3f06 579 SUPERFAMILY SSF48452 381 449 7.19E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS05985 210aed9d48ca9d39e3cb2dc29c2d3f06 579 SUPERFAMILY SSF53300 95 277 3.11E-12 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS05985 210aed9d48ca9d39e3cb2dc29c2d3f06 579 PANTHER PTHR22550:SF5 1 521 3.5E-73 T 23-04-2016 LT40_RS05985 210aed9d48ca9d39e3cb2dc29c2d3f06 579 Pfam PF13519 von Willebrand factor type A domain 95 200 2.0E-9 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS17310 9fabd49ac2e628f35096ab6f9ef04c34 128 Pfam PF01124 MAPEG family 3 125 9.4E-20 T 23-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein LT40_RS17310 9fabd49ac2e628f35096ab6f9ef04c34 128 PANTHER PTHR35371 1 128 7.5E-26 T 23-04-2016 LT40_RS17310 9fabd49ac2e628f35096ab6f9ef04c34 128 SUPERFAMILY SSF161084 1 125 4.71E-22 T 23-04-2016 LT40_RS17310 9fabd49ac2e628f35096ab6f9ef04c34 128 Gene3D G3DSA:1.20.120.550 2 125 3.0E-13 T 23-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain LT40_RS17185 5d7ef0ce59caa94d3440a4c936e68e02 301 Gene3D G3DSA:3.30.470.20 173 276 1.5E-35 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS17185 5d7ef0ce59caa94d3440a4c936e68e02 301 Gene3D G3DSA:3.30.1490.20 103 172 1.2E-6 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LT40_RS17185 5d7ef0ce59caa94d3440a4c936e68e02 301 PANTHER PTHR21621:SF0 1 288 2.2E-126 T 23-04-2016 LT40_RS17185 5d7ef0ce59caa94d3440a4c936e68e02 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.6E-68 T 23-04-2016 IPR013651 ATP-grasp fold, RimK-type LT40_RS17185 5d7ef0ce59caa94d3440a4c936e68e02 301 SUPERFAMILY SSF56059 98 288 8.31E-48 T 23-04-2016 LT40_RS17185 5d7ef0ce59caa94d3440a4c936e68e02 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 4.6E-84 T 23-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 LT40_RS17185 5d7ef0ce59caa94d3440a4c936e68e02 301 PANTHER PTHR21621 1 288 2.2E-126 T 23-04-2016 LT40_RS17185 5d7ef0ce59caa94d3440a4c936e68e02 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 55.022 T 23-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK LT40_RS17185 5d7ef0ce59caa94d3440a4c936e68e02 301 Gene3D G3DSA:3.40.50.20 8 102 1.2E-15 T 23-04-2016 IPR016185 Pre-ATP-grasp domain LT40_RS07125 bfc4b5c28a978bbfa9d3c793a9518722 439 SUPERFAMILY SSF51905 36 258 4.53E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07125 bfc4b5c28a978bbfa9d3c793a9518722 439 SUPERFAMILY SSF51905 366 402 4.53E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07125 bfc4b5c28a978bbfa9d3c793a9518722 439 PANTHER PTHR13847:SF196 1 433 8.7E-114 T 23-04-2016 LT40_RS07125 bfc4b5c28a978bbfa9d3c793a9518722 439 Pfam PF01266 FAD dependent oxidoreductase 36 393 4.7E-41 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS07125 bfc4b5c28a978bbfa9d3c793a9518722 439 PANTHER PTHR13847 1 433 8.7E-114 T 23-04-2016 LT40_RS07125 bfc4b5c28a978bbfa9d3c793a9518722 439 Gene3D G3DSA:3.50.50.60 356 403 1.8E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07125 bfc4b5c28a978bbfa9d3c793a9518722 439 Gene3D G3DSA:3.50.50.60 25 126 1.8E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07125 bfc4b5c28a978bbfa9d3c793a9518722 439 Gene3D G3DSA:3.50.50.60 179 257 1.8E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 PIRSF PIRSF000349 1 197 7.5E-86 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 PANTHER PTHR11404 1 192 7.9E-113 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 SUPERFAMILY SSF54719 82 192 4.58E-45 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 2.7E-35 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 8.8E-40 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 PANTHER PTHR11404:SF8 1 192 7.9E-113 T 23-04-2016 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 1.9E-23 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.9E-23 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.9E-23 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.9E-23 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.9E-23 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 Gene3D G3DSA:1.10.287.990 20 82 2.7E-25 T 23-04-2016 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 SUPERFAMILY SSF46609 1 84 1.24E-35 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS04215 ca1854f2b83e11a439549daad2b66c51 198 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 LT40_RS08810 917640f9251ab3dd33c9e4f3c22c8df1 146 PANTHER PTHR38107:SF2 1 143 7.7E-47 T 23-04-2016 LT40_RS08810 917640f9251ab3dd33c9e4f3c22c8df1 146 PANTHER PTHR38107 1 143 7.7E-47 T 23-04-2016 LT40_RS08810 917640f9251ab3dd33c9e4f3c22c8df1 146 SUPERFAMILY SSF53955 1 144 6.65E-55 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS08810 917640f9251ab3dd33c9e4f3c22c8df1 146 Gene3D G3DSA:1.10.530.40 3 144 1.4E-58 T 23-04-2016 IPR023347 Lysozyme domain GO:0003796 LT40_RS08810 917640f9251ab3dd33c9e4f3c22c8df1 146 Pfam PF00959 Phage lysozyme 32 136 1.5E-26 T 23-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 LT40_RS14690 726a64ab201899157a3fc42e1890cfad 491 Gene3D G3DSA:3.30.830.10 60 274 6.7E-39 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LT40_RS14690 726a64ab201899157a3fc42e1890cfad 491 Gene3D G3DSA:3.30.830.10 291 467 2.8E-26 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LT40_RS14690 726a64ab201899157a3fc42e1890cfad 491 Pfam PF05193 Peptidase M16 inactive domain 226 399 6.4E-27 T 23-04-2016 IPR007863 Peptidase M16, C-terminal LT40_RS14690 726a64ab201899157a3fc42e1890cfad 491 Pfam PF00675 Insulinase (Peptidase family M16) 76 215 2.3E-5 T 23-04-2016 IPR011765 Peptidase M16, N-terminal LT40_RS14690 726a64ab201899157a3fc42e1890cfad 491 PANTHER PTHR11851 67 463 4.2E-53 T 23-04-2016 LT40_RS14690 726a64ab201899157a3fc42e1890cfad 491 PANTHER PTHR11851:SF140 67 463 4.2E-53 T 23-04-2016 LT40_RS14690 726a64ab201899157a3fc42e1890cfad 491 SUPERFAMILY SSF63411 59 264 2.33E-41 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LT40_RS14690 726a64ab201899157a3fc42e1890cfad 491 SUPERFAMILY SSF63411 284 473 6.0E-42 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LT40_RS14975 ceb488e6d6b71d9df0003b2fa4c75978 441 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 215 329 1.4E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS14975 ceb488e6d6b71d9df0003b2fa4c75978 441 Gene3D G3DSA:3.40.50.300 240 336 2.4E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14975 ceb488e6d6b71d9df0003b2fa4c75978 441 Gene3D G3DSA:3.40.50.300 1 139 6.1E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14975 ceb488e6d6b71d9df0003b2fa4c75978 441 SUPERFAMILY SSF52540 240 334 2.41E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14975 ceb488e6d6b71d9df0003b2fa4c75978 441 SUPERFAMILY SSF52540 1 138 2.41E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14975 ceb488e6d6b71d9df0003b2fa4c75978 441 SUPERFAMILY SSF52540 179 210 2.41E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07750 b92074181f62f3824fcde164f53ab719 89 PANTHER PTHR34040 3 89 1.2E-23 T 23-04-2016 LT40_RS07750 b92074181f62f3824fcde164f53ab719 89 PIRSF PIRSF004669 1 89 2.2E-24 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LT40_RS07750 b92074181f62f3824fcde164f53ab719 89 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 7 84 2.4E-22 T 23-04-2016 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 LT40_RS07750 b92074181f62f3824fcde164f53ab719 89 Pfam PF01313 Bacterial export proteins, family 3 7 76 8.2E-23 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LT40_RS07750 b92074181f62f3824fcde164f53ab719 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.7E-20 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LT40_RS07750 b92074181f62f3824fcde164f53ab719 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.7E-20 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LT40_RS07750 b92074181f62f3824fcde164f53ab719 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.7E-20 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LT40_RS07080 730b8ae347e498a3ff96a1da852f9ae3 439 Gene3D G3DSA:3.50.50.60 355 399 8.5E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07080 730b8ae347e498a3ff96a1da852f9ae3 439 Gene3D G3DSA:3.50.50.60 23 121 8.5E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07080 730b8ae347e498a3ff96a1da852f9ae3 439 Gene3D G3DSA:3.50.50.60 174 254 8.5E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07080 730b8ae347e498a3ff96a1da852f9ae3 439 PANTHER PTHR13847 8 399 5.2E-64 T 23-04-2016 LT40_RS07080 730b8ae347e498a3ff96a1da852f9ae3 439 SUPERFAMILY SSF51905 32 255 6.47E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07080 730b8ae347e498a3ff96a1da852f9ae3 439 SUPERFAMILY SSF51905 336 400 6.47E-32 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS07080 730b8ae347e498a3ff96a1da852f9ae3 439 PANTHER PTHR13847:SF196 8 399 5.2E-64 T 23-04-2016 LT40_RS07080 730b8ae347e498a3ff96a1da852f9ae3 439 Pfam PF01266 FAD dependent oxidoreductase 33 392 1.9E-36 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS11650 bc513718fe394e697ac4e23b94cde1bc 385 SUPERFAMILY SSF50331 259 369 5.1E-9 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS11650 bc513718fe394e697ac4e23b94cde1bc 385 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS11650 bc513718fe394e697ac4e23b94cde1bc 385 SMART SM00382 42 225 8.0E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS11650 bc513718fe394e697ac4e23b94cde1bc 385 PANTHER PTHR24220 19 296 5.3E-135 T 23-04-2016 LT40_RS11650 bc513718fe394e697ac4e23b94cde1bc 385 PANTHER PTHR24220 315 326 5.3E-135 T 23-04-2016 LT40_RS11650 bc513718fe394e697ac4e23b94cde1bc 385 SUPERFAMILY SSF52540 17 257 1.46E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11650 bc513718fe394e697ac4e23b94cde1bc 385 Pfam PF00005 ABC transporter 33 175 2.4E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS11650 bc513718fe394e697ac4e23b94cde1bc 385 PANTHER PTHR24220:SF402 19 296 5.3E-135 T 23-04-2016 LT40_RS11650 bc513718fe394e697ac4e23b94cde1bc 385 PANTHER PTHR24220:SF402 315 326 5.3E-135 T 23-04-2016 LT40_RS11650 bc513718fe394e697ac4e23b94cde1bc 385 Pfam PF08402 TOBE domain 287 368 1.7E-9 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LT40_RS11650 bc513718fe394e697ac4e23b94cde1bc 385 Gene3D G3DSA:3.40.50.300 8 249 2.8E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16780 32d08e4bd86411a3f963be12e6340dd4 252 PANTHER PTHR38042 1 252 9.2E-57 T 23-04-2016 LT40_RS16780 32d08e4bd86411a3f963be12e6340dd4 252 Pfam PF02602 Uroporphyrinogen-III synthase HemD 21 241 2.0E-36 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16780 32d08e4bd86411a3f963be12e6340dd4 252 SUPERFAMILY SSF69618 4 245 9.55E-48 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 LT40_RS16780 32d08e4bd86411a3f963be12e6340dd4 252 Gene3D G3DSA:3.40.50.10090 4 114 1.5E-10 T 23-04-2016 LT40_RS16780 32d08e4bd86411a3f963be12e6340dd4 252 Gene3D G3DSA:3.40.50.10090 129 246 3.2E-10 T 23-04-2016 LT40_RS16780 32d08e4bd86411a3f963be12e6340dd4 252 PANTHER PTHR38042:SF1 1 252 9.2E-57 T 23-04-2016 LT40_RS20790 844c82555a510cd7a438eb512737bc84 303 Gene3D G3DSA:1.20.1080.10 53 280 3.6E-48 T 23-04-2016 IPR023271 Aquaporin-like LT40_RS20790 844c82555a510cd7a438eb512737bc84 303 PANTHER PTHR30520:SF2 21 280 1.9E-137 T 23-04-2016 LT40_RS20790 844c82555a510cd7a438eb512737bc84 303 Pfam PF01226 Formate/nitrite transporter 41 275 6.5E-42 T 23-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LT40_RS20790 844c82555a510cd7a438eb512737bc84 303 PANTHER PTHR30520 21 280 1.9E-137 T 23-04-2016 LT40_RS16710 5688a3163e00e969d7576510e745a8e5 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 81 194 8.9E-12 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS16710 5688a3163e00e969d7576510e745a8e5 231 Gene3D G3DSA:3.40.50.1000 2 224 8.4E-39 T 23-04-2016 IPR023214 HAD-like domain LT40_RS16710 5688a3163e00e969d7576510e745a8e5 231 PANTHER PTHR12725 1 227 1.2E-54 T 23-04-2016 LT40_RS16710 5688a3163e00e969d7576510e745a8e5 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 1.0E-22 T 23-04-2016 IPR023214 HAD-like domain LT40_RS16710 5688a3163e00e969d7576510e745a8e5 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 200 3.8E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS16710 5688a3163e00e969d7576510e745a8e5 231 SUPERFAMILY SSF56784 3 229 3.08E-46 T 23-04-2016 IPR023214 HAD-like domain LT40_RS16710 5688a3163e00e969d7576510e745a8e5 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.4E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS16710 5688a3163e00e969d7576510e745a8e5 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 1.4E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS16710 5688a3163e00e969d7576510e745a8e5 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 189 202 1.4E-5 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS16710 5688a3163e00e969d7576510e745a8e5 231 PANTHER PTHR12725:SF65 1 227 1.2E-54 T 23-04-2016 LT40_RS12445 efbce82262a32858157e9c5baa153029 523 SMART SM00267 341 517 1.6E-52 T 23-04-2016 IPR000160 GGDEF domain LT40_RS12445 efbce82262a32858157e9c5baa153029 523 SUPERFAMILY SSF55073 357 516 4.55E-42 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS12445 efbce82262a32858157e9c5baa153029 523 Gene3D G3DSA:3.30.450.20 103 191 3.9E-16 T 23-04-2016 LT40_RS12445 efbce82262a32858157e9c5baa153029 523 Gene3D G3DSA:3.30.70.270 354 517 2.5E-47 T 23-04-2016 LT40_RS12445 efbce82262a32858157e9c5baa153029 523 PANTHER PTHR10799:SF750 385 513 3.6E-26 T 23-04-2016 LT40_RS12445 efbce82262a32858157e9c5baa153029 523 PANTHER PTHR10799:SF750 197 336 3.6E-26 T 23-04-2016 LT40_RS12445 efbce82262a32858157e9c5baa153029 523 Gene3D G3DSA:3.30.450.20 192 289 8.0E-5 T 23-04-2016 LT40_RS12445 efbce82262a32858157e9c5baa153029 523 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 515 1.1E-45 T 23-04-2016 IPR000160 GGDEF domain LT40_RS12445 efbce82262a32858157e9c5baa153029 523 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 513 9.2E-43 T 23-04-2016 IPR000160 GGDEF domain LT40_RS12445 efbce82262a32858157e9c5baa153029 523 PANTHER PTHR10799 385 513 3.6E-26 T 23-04-2016 LT40_RS12445 efbce82262a32858157e9c5baa153029 523 PANTHER PTHR10799 197 336 3.6E-26 T 23-04-2016 LT40_RS12445 efbce82262a32858157e9c5baa153029 523 Pfam PF02743 Cache domain 60 266 1.4E-20 T 23-04-2016 IPR033479 Double Cache domain 1 LT40_RS20650 8992fe583ada566ac4762f3e7fc81a41 392 Pfam PF05762 VWA domain containing CoxE-like protein 186 275 3.1E-10 T 23-04-2016 IPR008912 Uncharacterised protein family CoxE-like LT40_RS09540 bd1e7882be6d70ca3662a6bd60e3a218 88 Pfam PF13670 Peptidase propeptide and YPEB domain 8 85 2.4E-19 T 23-04-2016 IPR025711 PepSY domain LT40_RS06855 ad23363eb74d44f55c913ed1d121ec4d 201 PIRSF PIRSF020736 1 200 3.2E-88 T 23-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 LT40_RS06855 ad23363eb74d44f55c913ed1d121ec4d 201 Gene3D G3DSA:1.20.1260.10 2 198 8.2E-85 T 23-04-2016 IPR012347 Ferritin-related LT40_RS06855 ad23363eb74d44f55c913ed1d121ec4d 201 PANTHER PTHR42637:SF1 1 201 1.8E-68 T 23-04-2016 LT40_RS06855 ad23363eb74d44f55c913ed1d121ec4d 201 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 53 195 3.0E-62 T 23-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 LT40_RS06855 ad23363eb74d44f55c913ed1d121ec4d 201 PANTHER PTHR42637 1 201 1.8E-68 T 23-04-2016 LT40_RS06855 ad23363eb74d44f55c913ed1d121ec4d 201 SUPERFAMILY SSF47240 2 198 1.32E-74 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS06445 a7e0747e565e7323bbc4f9234ad0be4d 729 PANTHER PTHR39624 11 142 2.2E-16 T 23-04-2016 LT40_RS06445 a7e0747e565e7323bbc4f9234ad0be4d 729 TIGRFAM TIGR03549 TIGR03549: YcaO domain protein 2 727 0.0 T 23-04-2016 IPR019938 YcaO domain protein LT40_RS06445 a7e0747e565e7323bbc4f9234ad0be4d 729 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 205 540 1.8E-70 T 23-04-2016 IPR003776 YcaO-like domain LT40_RS06445 a7e0747e565e7323bbc4f9234ad0be4d 729 Gene3D G3DSA:3.30.300.20 1 127 8.7E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta LT40_RS06445 a7e0747e565e7323bbc4f9234ad0be4d 729 SUPERFAMILY SSF82784 1 126 3.4E-19 T 23-04-2016 IPR003718 OsmC/Ohr family LT40_RS06445 a7e0747e565e7323bbc4f9234ad0be4d 729 Pfam PF02566 OsmC-like protein 32 126 2.4E-9 T 23-04-2016 IPR003718 OsmC/Ohr family LT40_RS06445 a7e0747e565e7323bbc4f9234ad0be4d 729 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 159 551 8.9E-94 T 23-04-2016 IPR003776 YcaO-like domain LT40_RS07540 1bb27b32350378216cc7cd8c04f0aca1 118 PANTHER PTHR30204 11 118 4.3E-34 T 23-04-2016 LT40_RS07540 1bb27b32350378216cc7cd8c04f0aca1 118 SUPERFAMILY SSF46955 17 116 1.19E-19 T 23-04-2016 IPR009061 Putative DNA-binding domain LT40_RS07540 1bb27b32350378216cc7cd8c04f0aca1 118 PANTHER PTHR30204:SF15 11 118 4.3E-34 T 23-04-2016 LT40_RS07540 1bb27b32350378216cc7cd8c04f0aca1 118 Pfam PF13411 MerR HTH family regulatory protein 19 86 3.4E-22 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS07540 1bb27b32350378216cc7cd8c04f0aca1 118 SMART SM00422 19 89 4.9E-8 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LT40_RS07540 1bb27b32350378216cc7cd8c04f0aca1 118 Gene3D G3DSA:1.10.1660.10 19 115 1.9E-17 T 23-04-2016 LT40_RS11075 762a4b44c33f3f729f73761a73be5e44 202 Pfam PF05401 Nodulation protein S (NodS) 18 144 1.2E-14 T 23-04-2016 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- LT40_RS11075 762a4b44c33f3f729f73761a73be5e44 202 SUPERFAMILY SSF53335 6 153 2.61E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS11075 762a4b44c33f3f729f73761a73be5e44 202 Gene3D G3DSA:3.40.50.150 8 150 2.2E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS10220 a2f70d3ed0e0e67d50665fb042a711c3 187 PANTHER PTHR36122 1 181 8.6E-63 T 23-04-2016 LT40_RS10220 a2f70d3ed0e0e67d50665fb042a711c3 187 Pfam PF04973 Nicotinamide mononucleotide transporter 3 181 4.4E-49 T 23-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 LT40_RS10220 a2f70d3ed0e0e67d50665fb042a711c3 187 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 3 183 5.3E-26 T 23-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 LT40_RS10220 a2f70d3ed0e0e67d50665fb042a711c3 187 PANTHER PTHR36122:SF1 1 181 8.6E-63 T 23-04-2016 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 Pfam PF02119 Flagellar P-ring protein 24 368 2.6E-142 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 PANTHER PTHR30381 1 369 2.3E-217 T 23-04-2016 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 Hamap MF_00416 Flagellar P-ring protein [flgI]. 5 369 40.869 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 PRINTS PR01010 Flagellar P-ring protein signature 24 39 1.2E-87 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 PRINTS PR01010 Flagellar P-ring protein signature 39 54 1.2E-87 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 PRINTS PR01010 Flagellar P-ring protein signature 125 143 1.2E-87 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 PRINTS PR01010 Flagellar P-ring protein signature 59 74 1.2E-87 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 PRINTS PR01010 Flagellar P-ring protein signature 192 210 1.2E-87 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 PRINTS PR01010 Flagellar P-ring protein signature 166 184 1.2E-87 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 PRINTS PR01010 Flagellar P-ring protein signature 256 268 1.2E-87 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 PRINTS PR01010 Flagellar P-ring protein signature 86 105 1.2E-87 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 PRINTS PR01010 Flagellar P-ring protein signature 108 125 1.2E-87 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 LT40_RS02335 e58f0e7b66d27422d50a2dad3e0b9b8a 369 PANTHER PTHR30381:SF1 1 369 2.3E-217 T 23-04-2016 LT40_RS02400 880d97873044e7ff6bd6997642bad4e1 108 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 35 107 6.5E-24 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LT40_RS02400 880d97873044e7ff6bd6997642bad4e1 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 93 106 1.4E-16 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LT40_RS02400 880d97873044e7ff6bd6997642bad4e1 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 72 88 1.4E-16 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LT40_RS02400 880d97873044e7ff6bd6997642bad4e1 108 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 37 53 1.4E-16 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LT40_RS02400 880d97873044e7ff6bd6997642bad4e1 108 Pfam PF02049 Flagellar hook-basal body complex protein FliE 22 108 2.9E-30 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LT40_RS02400 880d97873044e7ff6bd6997642bad4e1 108 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 108 17.717 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 LT40_RS02400 880d97873044e7ff6bd6997642bad4e1 108 PANTHER PTHR34653 5 108 1.0E-22 T 23-04-2016 LT40_RS16155 351fabcad0c3a85f59eee339a4815475 245 SUPERFAMILY SSF46785 10 77 1.46E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16155 351fabcad0c3a85f59eee339a4815475 245 SUPERFAMILY SSF55781 81 242 4.05E-34 T 23-04-2016 IPR029016 GAF domain-like LT40_RS16155 351fabcad0c3a85f59eee339a4815475 245 Gene3D G3DSA:3.30.450.40 78 239 6.5E-40 T 23-04-2016 IPR029016 GAF domain-like LT40_RS16155 351fabcad0c3a85f59eee339a4815475 245 Gene3D G3DSA:1.10.10.10 9 77 4.0E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16155 351fabcad0c3a85f59eee339a4815475 245 PANTHER PTHR30136 4 241 3.2E-54 T 23-04-2016 LT40_RS16155 351fabcad0c3a85f59eee339a4815475 245 PANTHER PTHR30136:SF14 4 241 3.2E-54 T 23-04-2016 LT40_RS16155 351fabcad0c3a85f59eee339a4815475 245 Pfam PF09339 IclR helix-turn-helix domain 10 57 2.2E-12 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS16155 351fabcad0c3a85f59eee339a4815475 245 SMART SM00346 7 97 0.0077 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS16155 351fabcad0c3a85f59eee339a4815475 245 Pfam PF01614 Bacterial transcriptional regulator 129 243 2.9E-13 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal LT40_RS05010 29af7e8bd688391b3fbc4aa7c9dfc5ec 352 Pfam PF02445 Quinolinate synthetase A protein 34 339 1.1E-100 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 LT40_RS05010 29af7e8bd688391b3fbc4aa7c9dfc5ec 352 PANTHER PTHR30573 18 351 2.0E-152 T 23-04-2016 LT40_RS05010 29af7e8bd688391b3fbc4aa7c9dfc5ec 352 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 1.2E-109 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 LT40_RS05010 29af7e8bd688391b3fbc4aa7c9dfc5ec 352 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 346 68.069 T 23-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 LT40_RS05010 29af7e8bd688391b3fbc4aa7c9dfc5ec 352 SUPERFAMILY SSF142754 29 340 2.22E-106 T 23-04-2016 LT40_RS12100 392e86c6c393f276fa85b821f45b9f60 195 Gene3D G3DSA:2.40.10.220 103 188 5.3E-4 T 23-04-2016 LT40_RS12100 392e86c6c393f276fa85b821f45b9f60 195 Pfam PF07238 PilZ domain 103 176 1.7E-10 T 23-04-2016 IPR009875 PilZ domain GO:0035438 LT40_RS19000 1e184da65cfe6a49a5f9d9548f5d9fb4 379 Gene3D G3DSA:3.50.50.60 5 83 1.4E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19000 1e184da65cfe6a49a5f9d9548f5d9fb4 379 Gene3D G3DSA:3.50.50.60 337 377 1.4E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19000 1e184da65cfe6a49a5f9d9548f5d9fb4 379 Gene3D G3DSA:3.50.50.60 137 214 1.4E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19000 1e184da65cfe6a49a5f9d9548f5d9fb4 379 SUPERFAMILY SSF51905 346 377 1.29E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19000 1e184da65cfe6a49a5f9d9548f5d9fb4 379 SUPERFAMILY SSF51905 7 215 1.29E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19000 1e184da65cfe6a49a5f9d9548f5d9fb4 379 TIGRFAM TIGR03364 HpnW_proposed: FAD dependent oxidoreductase TIGR03364 7 369 9.7E-134 T 23-04-2016 IPR017741 FAD-dependent oxidoreductase, HpnW LT40_RS19000 1e184da65cfe6a49a5f9d9548f5d9fb4 379 PANTHER PTHR13847 5 199 5.5E-15 T 23-04-2016 LT40_RS19000 1e184da65cfe6a49a5f9d9548f5d9fb4 379 Pfam PF01266 FAD dependent oxidoreductase 7 370 1.8E-31 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS05055 49699e8dfa5f45919e0ab55b4ddbc68d 163 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 97 114 - T 23-04-2016 IPR000614 Free Met sulfoxide reductase conserved site LT40_RS05055 49699e8dfa5f45919e0ab55b4ddbc68d 163 Pfam PF13185 GAF domain 38 152 5.2E-12 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS05055 49699e8dfa5f45919e0ab55b4ddbc68d 163 SMART SM00065 20 161 0.0094 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS05055 49699e8dfa5f45919e0ab55b4ddbc68d 163 SUPERFAMILY SSF55781 19 153 4.36E-40 T 23-04-2016 IPR029016 GAF domain-like LT40_RS05055 49699e8dfa5f45919e0ab55b4ddbc68d 163 PANTHER PTHR21021 11 154 2.2E-54 T 23-04-2016 LT40_RS05055 49699e8dfa5f45919e0ab55b4ddbc68d 163 Gene3D G3DSA:3.30.450.40 17 152 2.6E-48 T 23-04-2016 IPR029016 GAF domain-like LT40_RS01830 42039908addd0e5cf36e5c93580b7985 201 PANTHER PTHR30383 1 198 2.1E-42 T 23-04-2016 LT40_RS01830 42039908addd0e5cf36e5c93580b7985 201 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 27 183 1.5E-26 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain LT40_RS01830 42039908addd0e5cf36e5c93580b7985 201 SUPERFAMILY SSF52266 23 200 1.98E-49 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain LT40_RS01830 42039908addd0e5cf36e5c93580b7985 201 Gene3D G3DSA:3.40.50.1110 23 200 1.3E-52 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 Gene3D G3DSA:1.20.140.10 269 460 7.8E-51 T 23-04-2016 LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 33 8.6E-14 T 23-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 PANTHER PTHR10909 1 477 7.2E-258 T 23-04-2016 LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 SUPERFAMILY SSF47203 289 460 4.35E-47 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 PANTHER PTHR10909:SF296 1 477 7.2E-258 T 23-04-2016 LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 584 1.8E-31 T 23-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 SUPERFAMILY SSF56645 38 281 1.11E-54 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 163 272 5.3E-16 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 158 2.8E-11 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 Gene3D G3DSA:1.10.540.10 38 160 6.7E-14 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 1.3E-21 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS14010 46996f0a6dfe189e9b6d35e74907ae94 591 Gene3D G3DSA:2.40.110.10 162 268 1.1E-25 T 23-04-2016 LT40_RS19090 667f2aaf31bebae4dc53c0d8a1e107f5 171 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 6 169 41.925 T 23-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 LT40_RS19090 667f2aaf31bebae4dc53c0d8a1e107f5 171 Pfam PF01613 Flavin reductase like domain 18 164 1.2E-33 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LT40_RS19090 667f2aaf31bebae4dc53c0d8a1e107f5 171 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 9 164 3.0E-80 T 23-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 LT40_RS19090 667f2aaf31bebae4dc53c0d8a1e107f5 171 Gene3D G3DSA:2.30.110.10 7 162 3.1E-52 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS19090 667f2aaf31bebae4dc53c0d8a1e107f5 171 PANTHER PTHR30466:SF2 9 165 4.1E-60 T 23-04-2016 LT40_RS19090 667f2aaf31bebae4dc53c0d8a1e107f5 171 SMART SM00903 18 163 1.9E-51 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 LT40_RS19090 667f2aaf31bebae4dc53c0d8a1e107f5 171 SUPERFAMILY SSF50475 10 164 9.81E-46 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 LT40_RS19090 667f2aaf31bebae4dc53c0d8a1e107f5 171 PANTHER PTHR30466 9 165 4.1E-60 T 23-04-2016 LT40_RS19610 adfa699ea11369458f19e8953fb3b2b9 101 Pfam PF07363 Protein of unknown function (DUF1484) 45 98 7.9E-5 T 23-04-2016 IPR009957 Protein of unknown function DUF1484 LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 Gene3D G3DSA:3.40.50.720 11 256 3.5E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 SUPERFAMILY SSF51735 12 256 1.73E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 PANTHER PTHR24322 169 203 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 PANTHER PTHR24322 15 149 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 Pfam PF00106 short chain dehydrogenase 13 211 2.4E-24 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 PANTHER PTHR24322:SF540 169 203 1.4E-44 T 23-04-2016 LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 PANTHER PTHR24322:SF540 15 149 1.4E-44 T 23-04-2016 LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 2.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 2.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS06465 72d2e37cab3c4b8928b88e17d7466a64 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12855 ba922392f15351c79e189cdfa826e08e 101 Pfam PF11006 Protein of unknown function (DUF2845) 23 98 5.0E-18 T 23-04-2016 IPR021268 Protein of unknown function DUF2845 LT40_RS12005 f3ddae438bd911cf610302dd61c84204 129 Pfam PF13474 SnoaL-like domain 7 125 1.4E-17 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain LT40_RS12005 f3ddae438bd911cf610302dd61c84204 129 SUPERFAMILY SSF54427 2 124 1.74E-24 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS12005 f3ddae438bd911cf610302dd61c84204 129 Gene3D G3DSA:3.10.450.50 3 126 6.6E-19 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 Gene3D G3DSA:3.40.50.300 281 537 9.5E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 Gene3D G3DSA:3.40.50.300 10 259 1.6E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 SUPERFAMILY SSF52540 287 530 1.33E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 SMART SM00382 38 236 4.6E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 SMART SM00382 317 508 3.7E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 PANTHER PTHR24220:SF574 281 419 1.6E-126 T 23-04-2016 LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 PANTHER PTHR24220:SF574 13 265 1.6E-126 T 23-04-2016 LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 Pfam PF00005 ABC transporter 30 187 1.5E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 Pfam PF00005 ABC transporter 309 458 6.4E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 SUPERFAMILY SSF52540 10 259 8.59E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 510 540 3.4E-7 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 267 8.3E-5 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 PANTHER PTHR24220 281 419 1.6E-126 T 23-04-2016 LT40_RS11850 c0f21cfd613f1cb4c1e8a9afaf8ef630 552 PANTHER PTHR24220 13 265 1.6E-126 T 23-04-2016 LT40_RS11270 f6116654a8cf102a586eb2b0bf30a5cd 207 SUPERFAMILY SSF89392 26 206 5.49E-50 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX LT40_RS11270 f6116654a8cf102a586eb2b0bf30a5cd 207 PANTHER PTHR35869 1 207 4.5E-51 T 23-04-2016 LT40_RS11270 f6116654a8cf102a586eb2b0bf30a5cd 207 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 35 197 8.7E-57 T 23-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like LT40_RS11270 f6116654a8cf102a586eb2b0bf30a5cd 207 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 5 204 8.9E-31 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 LT40_RS11270 f6116654a8cf102a586eb2b0bf30a5cd 207 Gene3D G3DSA:2.50.20.10 26 206 6.0E-56 T 23-04-2016 LT40_RS11270 f6116654a8cf102a586eb2b0bf30a5cd 207 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 10 207 30.702 T 23-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 LT40_RS09200 57455b15e9e6312398db241fb22fcc19 381 PANTHER PTHR12526:SF399 111 379 2.5E-47 T 23-04-2016 LT40_RS09200 57455b15e9e6312398db241fb22fcc19 381 PANTHER PTHR12526 111 379 2.5E-47 T 23-04-2016 LT40_RS09200 57455b15e9e6312398db241fb22fcc19 381 Pfam PF00534 Glycosyl transferases group 1 203 353 6.2E-28 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS09200 57455b15e9e6312398db241fb22fcc19 381 Gene3D G3DSA:3.40.50.2000 179 354 1.4E-21 T 23-04-2016 LT40_RS09200 57455b15e9e6312398db241fb22fcc19 381 SUPERFAMILY SSF53756 4 379 8.37E-66 T 23-04-2016 LT40_RS09200 57455b15e9e6312398db241fb22fcc19 381 Pfam PF13439 Glycosyltransferase Family 4 16 174 1.2E-8 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LT40_RS13985 9cf1717a840ea9dc74d4c536cfacd868 205 SUPERFAMILY SSF55811 16 197 3.79E-46 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS13985 9cf1717a840ea9dc74d4c536cfacd868 205 Gene3D G3DSA:3.90.79.10 11 198 8.4E-54 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS13985 9cf1717a840ea9dc74d4c536cfacd868 205 ProSitePatterns PS00893 Nudix box signature. 93 114 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LT40_RS13985 9cf1717a840ea9dc74d4c536cfacd868 205 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 17 195 1.3E-48 T 23-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 LT40_RS13985 9cf1717a840ea9dc74d4c536cfacd868 205 PANTHER PTHR11839:SF5 23 204 3.2E-85 T 23-04-2016 LT40_RS13985 9cf1717a840ea9dc74d4c536cfacd868 205 PANTHER PTHR11839 23 204 3.2E-85 T 23-04-2016 LT40_RS13985 9cf1717a840ea9dc74d4c536cfacd868 205 Pfam PF00293 NUDIX domain 52 172 8.1E-14 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 SUPERFAMILY SSF81338 11 259 4.84E-77 T 23-04-2016 IPR023271 Aquaporin-like LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 Pfam PF00230 Major intrinsic protein 6 253 2.1E-63 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 ProSitePatterns PS00221 MIP family signature. 68 76 - T 23-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 PANTHER PTHR19139:SF100 12 277 1.3E-95 T 23-04-2016 LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 PANTHER PTHR19139 12 277 1.3E-95 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 PRINTS PR00783 Major intrinsic protein family signature 153 171 4.0E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 PRINTS PR00783 Major intrinsic protein family signature 50 74 4.0E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 PRINTS PR00783 Major intrinsic protein family signature 236 256 4.0E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 PRINTS PR00783 Major intrinsic protein family signature 87 106 4.0E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 PRINTS PR00783 Major intrinsic protein family signature 186 208 4.0E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 PRINTS PR00783 Major intrinsic protein family signature 11 30 4.0E-49 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 Gene3D G3DSA:1.20.1080.10 6 260 4.2E-86 T 23-04-2016 IPR023271 Aquaporin-like LT40_RS05550 01c26dae45dde763de6e1cff01702a16 279 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 253 2.4E-67 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 LT40_RS04755 962c902af67bdfb510622889f5aa10c2 124 Gene3D G3DSA:1.25.40.10 21 103 2.4E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS04755 962c902af67bdfb510622889f5aa10c2 124 SUPERFAMILY SSF48452 23 102 5.82E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS01640 5a9d72a6c959f99408e406524ead428c 246 Pfam PF00881 Nitroreductase family 22 214 5.0E-33 T 23-04-2016 IPR029479 Nitroreductase LT40_RS01640 5a9d72a6c959f99408e406524ead428c 246 SUPERFAMILY SSF55469 18 237 1.24E-46 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 LT40_RS01640 5a9d72a6c959f99408e406524ead428c 246 PANTHER PTHR23026:SF90 16 244 3.4E-38 T 23-04-2016 LT40_RS01640 5a9d72a6c959f99408e406524ead428c 246 Gene3D G3DSA:3.40.109.10 135 240 6.3E-44 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 LT40_RS01640 5a9d72a6c959f99408e406524ead428c 246 Gene3D G3DSA:3.40.109.10 19 77 6.3E-44 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 LT40_RS01640 5a9d72a6c959f99408e406524ead428c 246 PANTHER PTHR23026 16 244 3.4E-38 T 23-04-2016 LT40_RS15470 1842d855683d0e6a3139037ab7724f84 696 Pfam PF04632 Fusaric acid resistance protein family 13 675 2.2E-189 T 23-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 LT40_RS15470 1842d855683d0e6a3139037ab7724f84 696 PANTHER PTHR30509:SF1 317 653 8.0E-85 T 23-04-2016 LT40_RS15470 1842d855683d0e6a3139037ab7724f84 696 PANTHER PTHR30509:SF1 8 253 8.0E-85 T 23-04-2016 LT40_RS15470 1842d855683d0e6a3139037ab7724f84 696 PANTHER PTHR30509 317 653 8.0E-85 T 23-04-2016 LT40_RS15470 1842d855683d0e6a3139037ab7724f84 696 PANTHER PTHR30509 8 253 8.0E-85 T 23-04-2016 LT40_RS09095 b1dbfcf9a26c7d7cb752943f7e3fe5ec 271 SUPERFAMILY SSF51735 2 227 9.43E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09095 b1dbfcf9a26c7d7cb752943f7e3fe5ec 271 Gene3D G3DSA:3.40.50.720 2 220 1.2E-11 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11775 286b21546b1fab4d964faf810378f83c 785 Gene3D G3DSA:1.50.10.10 309 705 3.9E-98 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 LT40_RS11775 286b21546b1fab4d964faf810378f83c 785 PIRSF PIRSF036289 1 783 5.6E-144 T 23-04-2016 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase LT40_RS11775 286b21546b1fab4d964faf810378f83c 785 PANTHER PTHR11051 9 783 4.5E-135 T 23-04-2016 LT40_RS11775 286b21546b1fab4d964faf810378f83c 785 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 12 257 2.1E-36 T 23-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 LT40_RS11775 286b21546b1fab4d964faf810378f83c 785 Gene3D G3DSA:2.70.98.40 8 261 3.1E-40 T 23-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 LT40_RS11775 286b21546b1fab4d964faf810378f83c 785 SUPERFAMILY SSF74650 9 259 7.85E-34 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LT40_RS11775 286b21546b1fab4d964faf810378f83c 785 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 311 712 3.3E-102 T 23-04-2016 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 LT40_RS11775 286b21546b1fab4d964faf810378f83c 785 PANTHER PTHR11051:SF9 9 783 4.5E-135 T 23-04-2016 LT40_RS11775 286b21546b1fab4d964faf810378f83c 785 SUPERFAMILY SSF48208 271 767 8.33E-80 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 LT40_RS08955 b796192a7da437895e2499cce6a905a9 93 Pfam PF13616 PPIC-type PPIASE domain 10 91 7.3E-23 T 23-04-2016 LT40_RS08955 b796192a7da437895e2499cce6a905a9 93 SUPERFAMILY SSF54534 3 89 3.66E-29 T 23-04-2016 LT40_RS08955 b796192a7da437895e2499cce6a905a9 93 Gene3D G3DSA:3.10.50.40 3 93 5.9E-35 T 23-04-2016 LT40_RS08955 b796192a7da437895e2499cce6a905a9 93 PANTHER PTHR10657 4 93 3.8E-41 T 23-04-2016 LT40_RS02680 470d275f53111a78b9cc77b648e78b24 353 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 126 1.9E-13 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LT40_RS02680 470d275f53111a78b9cc77b648e78b24 353 Gene3D G3DSA:3.40.50.720 4 254 1.5E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02680 470d275f53111a78b9cc77b648e78b24 353 PANTHER PTHR32487 1 353 7.4E-124 T 23-04-2016 LT40_RS02680 470d275f53111a78b9cc77b648e78b24 353 SUPERFAMILY SSF51735 304 347 4.33E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02680 470d275f53111a78b9cc77b648e78b24 353 SUPERFAMILY SSF51735 5 264 4.33E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS02680 470d275f53111a78b9cc77b648e78b24 353 PANTHER PTHR32487:SF0 1 353 7.4E-124 T 23-04-2016 LT40_RS14290 6f53afbcae99c0c1e300f2afbe717602 125 PANTHER PTHR35303:SF1 2 125 1.7E-68 T 23-04-2016 LT40_RS14290 6f53afbcae99c0c1e300f2afbe717602 125 Pfam PF06155 Protein of unknown function (DUF971) 8 90 3.5E-26 T 23-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 LT40_RS14290 6f53afbcae99c0c1e300f2afbe717602 125 PANTHER PTHR35303 2 125 1.7E-68 T 23-04-2016 LT40_RS02795 5ffac92f55e5187548afb0fb1e1822ec 306 PANTHER PTHR21581 24 306 1.6E-145 T 23-04-2016 LT40_RS02795 5ffac92f55e5187548afb0fb1e1822ec 306 PANTHER PTHR21581:SF8 24 306 1.6E-145 T 23-04-2016 LT40_RS02795 5ffac92f55e5187548afb0fb1e1822ec 306 Gene3D G3DSA:3.40.710.10 33 279 3.7E-64 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS02795 5ffac92f55e5187548afb0fb1e1822ec 306 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 38 263 6.6E-71 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LT40_RS02795 5ffac92f55e5187548afb0fb1e1822ec 306 SUPERFAMILY SSF56601 8 279 1.41E-60 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS02795 5ffac92f55e5187548afb0fb1e1822ec 306 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 118 135 5.0E-13 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LT40_RS02795 5ffac92f55e5187548afb0fb1e1822ec 306 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 68 79 5.0E-13 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LT40_RS02795 5ffac92f55e5187548afb0fb1e1822ec 306 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 145 158 5.0E-13 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LT40_RS12745 f2737fc4ff2283384dcb826dbd4b3f3f 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 8.0E-37 T 23-04-2016 LT40_RS12745 f2737fc4ff2283384dcb826dbd4b3f3f 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 2.9E-64 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS12745 f2737fc4ff2283384dcb826dbd4b3f3f 163 SUPERFAMILY SSF55021 1 75 2.51E-21 T 23-04-2016 LT40_RS12745 f2737fc4ff2283384dcb826dbd4b3f3f 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 1.9E-26 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS12745 f2737fc4ff2283384dcb826dbd4b3f3f 163 Gene3D G3DSA:3.30.70.1150 83 161 4.5E-30 T 23-04-2016 LT40_RS12745 f2737fc4ff2283384dcb826dbd4b3f3f 163 Gene3D G3DSA:3.30.70.260 1 78 6.3E-35 T 23-04-2016 LT40_RS12745 f2737fc4ff2283384dcb826dbd4b3f3f 163 PANTHER PTHR30239 1 159 1.0E-88 T 23-04-2016 LT40_RS12745 f2737fc4ff2283384dcb826dbd4b3f3f 163 Pfam PF13710 ACT domain 12 72 3.1E-15 T 23-04-2016 LT40_RS12745 f2737fc4ff2283384dcb826dbd4b3f3f 163 SUPERFAMILY SSF55021 79 162 2.29E-26 T 23-04-2016 LT40_RS06425 7dd1940ba410151fb678845e0c6c8e1c 283 PANTHER PTHR30024 1 238 1.5E-56 T 23-04-2016 LT40_RS06425 7dd1940ba410151fb678845e0c6c8e1c 283 TIGRFAM TIGR04553 ABC_peri_selen: putative selenate ABC transporter periplasmic binding protein 26 283 9.1E-111 T 23-04-2016 IPR030836 Putative selenate ABC transporter periplasmic binding protein LT40_RS06425 7dd1940ba410151fb678845e0c6c8e1c 283 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 8 242 6.1E-73 T 23-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 LT40_RS06425 7dd1940ba410151fb678845e0c6c8e1c 283 Gene3D G3DSA:3.40.190.10 118 217 5.9E-12 T 23-04-2016 LT40_RS06425 7dd1940ba410151fb678845e0c6c8e1c 283 PANTHER PTHR30024:SF17 1 238 1.5E-56 T 23-04-2016 LT40_RS06425 7dd1940ba410151fb678845e0c6c8e1c 283 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 269 1.2E-67 T 23-04-2016 LT40_RS06425 7dd1940ba410151fb678845e0c6c8e1c 283 SUPERFAMILY SSF53850 44 231 5.66E-38 T 23-04-2016 LT40_RS08920 97854b76e9f73bf4a06271194cf52100 385 PANTHER PTHR30486 1 374 1.4E-147 T 23-04-2016 LT40_RS08920 97854b76e9f73bf4a06271194cf52100 385 PANTHER PTHR30486:SF3 1 374 1.4E-147 T 23-04-2016 LT40_RS08920 97854b76e9f73bf4a06271194cf52100 385 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 7.9E-131 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 LT40_RS08920 97854b76e9f73bf4a06271194cf52100 385 SMART SM00382 122 247 9.8E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS08920 97854b76e9f73bf4a06271194cf52100 385 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LT40_RS08920 97854b76e9f73bf4a06271194cf52100 385 SUPERFAMILY SSF52540 6 336 1.91E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08920 97854b76e9f73bf4a06271194cf52100 385 Pfam PF00437 Type II/IV secretion system protein 113 254 4.4E-37 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LT40_RS08920 97854b76e9f73bf4a06271194cf52100 385 Gene3D G3DSA:3.40.50.300 101 343 9.7E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20065 6837075309c6f3c08ff172e358956dbf 233 PANTHER PTHR24322 145 175 1.9E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS20065 6837075309c6f3c08ff172e358956dbf 233 PANTHER PTHR24322 7 129 1.9E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS20065 6837075309c6f3c08ff172e358956dbf 233 SUPERFAMILY SSF51735 5 232 1.33E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS20065 6837075309c6f3c08ff172e358956dbf 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS20065 6837075309c6f3c08ff172e358956dbf 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 3.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS20065 6837075309c6f3c08ff172e358956dbf 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS20065 6837075309c6f3c08ff172e358956dbf 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.2E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS20065 6837075309c6f3c08ff172e358956dbf 233 Gene3D G3DSA:3.40.50.720 5 232 1.9E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS20065 6837075309c6f3c08ff172e358956dbf 233 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS20065 6837075309c6f3c08ff172e358956dbf 233 Pfam PF00106 short chain dehydrogenase 5 177 3.8E-28 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS03105 053355d17002cc0cf9d8728ad0a5a5e3 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 1 333 41.44 T 23-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 LT40_RS03105 053355d17002cc0cf9d8728ad0a5a5e3 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 7 326 3.3E-88 T 23-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 LT40_RS03105 053355d17002cc0cf9d8728ad0a5a5e3 335 PANTHER PTHR38772 1 335 1.1E-160 T 23-04-2016 LT40_RS01470 262d3aa987b1d77cfb85893234c64ded 344 Gene3D G3DSA:3.30.870.10 66 141 1.2E-5 T 23-04-2016 LT40_RS01470 262d3aa987b1d77cfb85893234c64ded 344 Pfam PF13091 PLD-like domain 41 139 1.8E-8 T 23-04-2016 IPR025202 Phospholipase D-like domain LT40_RS12175 d6e244d53bfe467abe89f89d811b90b9 280 PANTHER PTHR11085:SF22 160 272 7.4E-101 T 23-04-2016 LT40_RS12175 d6e244d53bfe467abe89f89d811b90b9 280 PANTHER PTHR11085:SF22 17 142 7.4E-101 T 23-04-2016 LT40_RS12175 d6e244d53bfe467abe89f89d811b90b9 280 Gene3D G3DSA:3.30.1600.10 119 192 3.7E-17 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain LT40_RS12175 d6e244d53bfe467abe89f89d811b90b9 280 Gene3D G3DSA:3.30.1600.10 32 67 3.7E-17 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain LT40_RS12175 d6e244d53bfe467abe89f89d811b90b9 280 PANTHER PTHR11085 160 272 7.4E-101 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 LT40_RS12175 d6e244d53bfe467abe89f89d811b90b9 280 PANTHER PTHR11085 17 142 7.4E-101 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 LT40_RS12175 d6e244d53bfe467abe89f89d811b90b9 280 SUPERFAMILY SSF52467 15 269 9.81E-70 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12175 d6e244d53bfe467abe89f89d811b90b9 280 Gene3D G3DSA:3.40.50.1220 15 31 7.0E-40 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12175 d6e244d53bfe467abe89f89d811b90b9 280 Gene3D G3DSA:3.40.50.1220 200 272 7.0E-40 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12175 d6e244d53bfe467abe89f89d811b90b9 280 Gene3D G3DSA:3.40.50.1220 81 118 7.0E-40 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12175 d6e244d53bfe467abe89f89d811b90b9 280 Pfam PF02146 Sir2 family 21 222 2.5E-42 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 LT40_RS18695 49d04b0e48dd0129b51df90cb71dc04a 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 206 1.3E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18695 49d04b0e48dd0129b51df90cb71dc04a 213 SUPERFAMILY SSF161098 9 200 1.22E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18695 49d04b0e48dd0129b51df90cb71dc04a 213 Gene3D G3DSA:1.10.3720.10 9 209 6.6E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS18695 49d04b0e48dd0129b51df90cb71dc04a 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 103 1.6E-24 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS18695 49d04b0e48dd0129b51df90cb71dc04a 213 PANTHER PTHR30614 4 213 1.8E-57 T 23-04-2016 LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 Gene3D G3DSA:1.10.10.10 7 82 2.6E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 Pfam PF03466 LysR substrate binding domain 95 292 1.3E-32 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 SUPERFAMILY SSF46785 7 82 1.17E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 Gene3D G3DSA:3.40.190.10 180 263 5.4E-35 T 23-04-2016 LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 SUPERFAMILY SSF53850 95 295 4.16E-36 T 23-04-2016 LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 PANTHER PTHR30537:SF15 1 293 1.7E-127 T 23-04-2016 LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.7E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.7E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.7E-9 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 5.1E-21 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 PANTHER PTHR30537 1 293 1.7E-127 T 23-04-2016 LT40_RS16655 c9d23bed4954d66a75114ccba0ab2427 298 Gene3D G3DSA:3.40.190.10 97 179 1.4E-25 T 23-04-2016 LT40_RS09445 728228229a4e7c799b0d545b7de11bba 427 Pfam PF13692 Glycosyl transferases group 1 215 353 6.0E-20 T 23-04-2016 LT40_RS09445 728228229a4e7c799b0d545b7de11bba 427 SUPERFAMILY SSF53756 15 115 4.19E-20 T 23-04-2016 LT40_RS09445 728228229a4e7c799b0d545b7de11bba 427 SUPERFAMILY SSF53756 147 384 4.19E-20 T 23-04-2016 LT40_RS05655 18785886c3eef5237e6290e6e784bbf3 201 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 3 198 31.099 T 23-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 LT40_RS05655 18785886c3eef5237e6290e6e784bbf3 201 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 6 193 2.2E-43 T 23-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 LT40_RS05655 18785886c3eef5237e6290e6e784bbf3 201 Pfam PF03358 NADPH-dependent FMN reductase 13 126 1.0E-7 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 LT40_RS05655 18785886c3eef5237e6290e6e784bbf3 201 Gene3D G3DSA:3.40.50.360 4 196 3.6E-66 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS05655 18785886c3eef5237e6290e6e784bbf3 201 ProSitePatterns PS00201 Flavodoxin signature. 8 24 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 LT40_RS05655 18785886c3eef5237e6290e6e784bbf3 201 PANTHER PTHR30546 6 193 2.1E-70 T 23-04-2016 LT40_RS05655 18785886c3eef5237e6290e6e784bbf3 201 SUPERFAMILY SSF52218 5 195 1.57E-61 T 23-04-2016 IPR029039 Flavoprotein-like domain LT40_RS13780 9160e363f438c19e44b2e90869cbed52 644 SMART SM00304 313 367 9.8E-12 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS13780 9160e363f438c19e44b2e90869cbed52 644 SMART SM00283 382 643 6.2E-49 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS13780 9160e363f438c19e44b2e90869cbed52 644 PANTHER PTHR32089 287 644 1.8E-81 T 23-04-2016 LT40_RS13780 9160e363f438c19e44b2e90869cbed52 644 PANTHER PTHR32089 138 233 1.8E-81 T 23-04-2016 LT40_RS13780 9160e363f438c19e44b2e90869cbed52 644 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 448 642 6.5E-42 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS13780 9160e363f438c19e44b2e90869cbed52 644 SUPERFAMILY SSF58104 335 643 2.35E-61 T 23-04-2016 LT40_RS13780 9160e363f438c19e44b2e90869cbed52 644 Pfam PF00672 HAMP domain 296 363 2.5E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS13780 9160e363f438c19e44b2e90869cbed52 644 Gene3D G3DSA:1.10.287.950 398 613 7.6E-44 T 23-04-2016 LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 507 534 2.5E-5 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 266 0.019 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 Pfam PF00005 ABC transporter 24 182 4.2E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 Pfam PF00005 ABC transporter 308 456 2.8E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 SUPERFAMILY SSF52540 5 254 1.16E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 Gene3D G3DSA:3.40.50.300 275 530 1.4E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 Gene3D G3DSA:3.40.50.300 4 255 9.3E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 PANTHER PTHR24220:SF574 6 413 2.1E-121 T 23-04-2016 LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 SMART SM00382 315 505 3.6E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 SMART SM00382 33 232 1.5E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 PANTHER PTHR24220 6 413 2.1E-121 T 23-04-2016 LT40_RS10435 33a04c3eb51d73aa0f98c110a42ca1a7 544 SUPERFAMILY SSF52540 302 527 1.02E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1146 1.9E-67 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 Pfam PF06470 SMC proteins Flexible Hinge Domain 523 557 3.7E-6 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 PANTHER PTHR18937:SF261 1 1161 0.0 T 23-04-2016 LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1153 0.0 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 SUPERFAMILY SSF52540 955 1156 4.11E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 SUPERFAMILY SSF52540 1 210 4.11E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 SMART SM00968 520 615 6.0E-9 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 PANTHER PTHR18937 1 1161 0.0 T 23-04-2016 LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 PIRSF PIRSF005719 1 1161 3.3E-266 T 23-04-2016 IPR024704 Structural maintenance of chromosomes protein LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 Gene3D G3DSA:3.40.50.300 1 166 4.2E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 Gene3D G3DSA:3.40.50.300 1003 1157 4.2E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 SUPERFAMILY SSF75553 485 660 1.83E-8 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 LT40_RS08985 1d897c544f266d5c4e8dcab5ee1de2d4 1162 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1155 23.115 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 LT40_RS08230 472cc3ce0c04757a2ee79ddc6f3a33d2 313 PANTHER PTHR30273:SF2 4 311 3.2E-60 T 23-04-2016 LT40_RS08230 472cc3ce0c04757a2ee79ddc6f3a33d2 313 PIRSF PIRSF018266 1 309 2.0E-84 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component LT40_RS08230 472cc3ce0c04757a2ee79ddc6f3a33d2 313 PANTHER PTHR30273 4 311 3.2E-60 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component LT40_RS08230 472cc3ce0c04757a2ee79ddc6f3a33d2 313 Pfam PF04773 FecR protein 105 197 4.0E-23 T 23-04-2016 IPR006860 FecR protein LT40_RS08230 472cc3ce0c04757a2ee79ddc6f3a33d2 313 Pfam PF16344 Domain of unknown function (DUF4974) 225 296 1.0E-7 T 23-04-2016 IPR032508 Protein FecR, C-terminal LT40_RS08230 472cc3ce0c04757a2ee79ddc6f3a33d2 313 Pfam PF16220 Domain of unknown function (DUF4880) 12 53 2.1E-8 T 23-04-2016 IPR032623 FecR, N-terminal LT40_RS07060 39bf59689b01e1ad69f83cd8ad4e9932 518 PANTHER PTHR30047 11 383 1.5E-191 T 23-04-2016 LT40_RS07060 39bf59689b01e1ad69f83cd8ad4e9932 518 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 15 518 1.2E-177 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 LT40_RS07060 39bf59689b01e1ad69f83cd8ad4e9932 518 PANTHER PTHR30047:SF2 402 518 1.5E-191 T 23-04-2016 LT40_RS07060 39bf59689b01e1ad69f83cd8ad4e9932 518 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 518 1.5E-138 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 LT40_RS07060 39bf59689b01e1ad69f83cd8ad4e9932 518 PANTHER PTHR30047:SF2 11 383 1.5E-191 T 23-04-2016 LT40_RS07060 39bf59689b01e1ad69f83cd8ad4e9932 518 PANTHER PTHR30047 402 518 1.5E-191 T 23-04-2016 LT40_RS04870 815bf68f47b32c5a71a72c38aba3b202 197 PANTHER PTHR19136 9 195 4.4E-23 T 23-04-2016 LT40_RS04870 815bf68f47b32c5a71a72c38aba3b202 197 Gene3D G3DSA:3.90.550.10 9 196 2.8E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS04870 815bf68f47b32c5a71a72c38aba3b202 197 Pfam PF12804 MobA-like NTP transferase domain 9 172 9.6E-31 T 23-04-2016 IPR025877 MobA-like NTP transferase LT40_RS04870 815bf68f47b32c5a71a72c38aba3b202 197 PANTHER PTHR19136:SF78 9 195 4.4E-23 T 23-04-2016 LT40_RS04870 815bf68f47b32c5a71a72c38aba3b202 197 SUPERFAMILY SSF53448 8 195 5.63E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS20925 40a5b25fb8e652acfd15c405945ab0a8 246 Pfam PF13175 AAA ATPase domain 67 167 1.8E-17 T 23-04-2016 LT40_RS20925 40a5b25fb8e652acfd15c405945ab0a8 246 Gene3D G3DSA:3.40.50.300 95 171 2.1E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05135 ec706776f2f1b919589fd7b3377da88f 212 Gene3D G3DSA:2.60.120.10 47 181 3.4E-40 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS05135 ec706776f2f1b919589fd7b3377da88f 212 SUPERFAMILY SSF51182 9 195 2.0E-54 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS05135 ec706776f2f1b919589fd7b3377da88f 212 Pfam PF05995 Cysteine dioxygenase type I 35 160 7.4E-7 T 23-04-2016 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|UniPathway: UPA00012 LT40_RS05135 ec706776f2f1b919589fd7b3377da88f 212 Gene3D G3DSA:1.20.5.440 1 45 6.7E-14 T 23-04-2016 LT40_RS05135 ec706776f2f1b919589fd7b3377da88f 212 PANTHER PTHR12918 37 204 2.4E-25 T 23-04-2016 LT40_RS14515 1e8c92b49d71897844539baf05b50a2c 252 SUPERFAMILY SSF53850 32 252 4.76E-32 T 23-04-2016 LT40_RS14515 1e8c92b49d71897844539baf05b50a2c 252 Gene3D G3DSA:3.40.190.10 32 156 9.1E-8 T 23-04-2016 LT40_RS14515 1e8c92b49d71897844539baf05b50a2c 252 PANTHER PTHR38834 1 251 6.7E-107 T 23-04-2016 LT40_RS14515 1e8c92b49d71897844539baf05b50a2c 252 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 251 1.0E-13 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS14515 1e8c92b49d71897844539baf05b50a2c 252 PANTHER PTHR38834:SF1 1 251 6.7E-107 T 23-04-2016 LT40_RS06260 747be79bb55810bd1f041800f20a4e62 370 Gene3D G3DSA:2.40.180.10 27 363 1.1E-38 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS06260 747be79bb55810bd1f041800f20a4e62 370 SUPERFAMILY SSF56634 26 365 1.83E-48 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 LT40_RS06260 747be79bb55810bd1f041800f20a4e62 370 PANTHER PTHR36195 59 370 1.7E-61 T 23-04-2016 LT40_RS06260 747be79bb55810bd1f041800f20a4e62 370 PANTHER PTHR36195:SF3 59 370 1.7E-61 T 23-04-2016 LT40_RS13680 65f4442a8b0dc2de8ef2a65332d4bb68 304 PANTHER PTHR11795:SF371 4 304 8.8E-128 T 23-04-2016 LT40_RS13680 65f4442a8b0dc2de8ef2a65332d4bb68 304 PANTHER PTHR11795 4 304 8.8E-128 T 23-04-2016 LT40_RS13680 65f4442a8b0dc2de8ef2a65332d4bb68 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 288 3.7E-49 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS01860 3d4197e3918c40a7ad3d4da6feb1396d 166 PANTHER PTHR31964 1 156 5.6E-20 T 23-04-2016 LT40_RS01860 3d4197e3918c40a7ad3d4da6feb1396d 166 Pfam PF00582 Universal stress protein family 1 156 1.1E-19 T 23-04-2016 IPR006016 UspA GO:0006950 LT40_RS01860 3d4197e3918c40a7ad3d4da6feb1396d 166 Gene3D G3DSA:3.40.50.620 1 157 1.0E-25 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS01860 3d4197e3918c40a7ad3d4da6feb1396d 166 PANTHER PTHR31964:SF42 1 156 5.6E-20 T 23-04-2016 LT40_RS01860 3d4197e3918c40a7ad3d4da6feb1396d 166 SUPERFAMILY SSF52402 3 156 7.95E-24 T 23-04-2016 LT40_RS15365 baa70e5cb15163223483d403dfd037a6 60 Pfam PF10055 Uncharacterized small protein (DUF2292) 17 52 2.0E-16 T 23-04-2016 IPR018743 Protein of unknown function DUF2292 LT40_RS16380 86b265e9594eff18845714b97b6eb7e6 303 Gene3D G3DSA:3.40.50.2300 2 134 2.7E-38 T 23-04-2016 LT40_RS16380 86b265e9594eff18845714b97b6eb7e6 303 PANTHER PTHR26402 4 125 6.6E-37 T 23-04-2016 LT40_RS16380 86b265e9594eff18845714b97b6eb7e6 303 SUPERFAMILY SSF52172 1 130 1.22E-35 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS16380 86b265e9594eff18845714b97b6eb7e6 303 SMART SM00448 4 119 3.1E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS16380 86b265e9594eff18845714b97b6eb7e6 303 Pfam PF00072 Response regulator receiver domain 6 119 5.5E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 Gene3D G3DSA:1.10.10.160 109 181 1.6E-17 T 23-04-2016 IPR013986 DExx box DNA helicase domain LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 SUPERFAMILY SSF52540 2 638 4.4E-161 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 Gene3D G3DSA:3.40.50.300 551 640 1.1E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 Gene3D G3DSA:3.40.50.300 280 383 1.1E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 3 668 0.0 T 23-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 Gene3D G3DSA:3.40.50.300 2 105 9.4E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 Gene3D G3DSA:3.40.50.300 182 279 9.4E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 PANTHER PTHR11070:SF19 1 650 0.0 T 23-04-2016 LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 2.7E-66 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 Gene3D G3DSA:1.10.486.10 384 522 4.3E-36 T 23-04-2016 LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 265 2.9E-71 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 PANTHER PTHR11070 1 650 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 LT40_RS16630 64c45077973dbbe9271682a7f9353352 669 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 668 39.789 T 23-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 LT40_RS07595 2f28bdeb878050048c4b38549ad1497b 515 Gene3D G3DSA:3.90.1580.10 98 308 1.1E-32 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme LT40_RS07595 2f28bdeb878050048c4b38549ad1497b 515 PANTHER PTHR23150:SF19 102 151 2.6E-24 T 23-04-2016 LT40_RS07595 2f28bdeb878050048c4b38549ad1497b 515 PANTHER PTHR23150 102 151 2.6E-24 T 23-04-2016 LT40_RS07595 2f28bdeb878050048c4b38549ad1497b 515 Pfam PF03781 Sulfatase-modifying factor enzyme 1 95 304 2.9E-32 T 23-04-2016 IPR005532 Sulfatase-modifying factor enzyme LT40_RS07595 2f28bdeb878050048c4b38549ad1497b 515 PANTHER PTHR23150:SF19 170 342 2.6E-24 T 23-04-2016 LT40_RS07595 2f28bdeb878050048c4b38549ad1497b 515 SUPERFAMILY SSF56436 99 304 1.81E-33 T 23-04-2016 IPR016187 C-type lectin fold LT40_RS07595 2f28bdeb878050048c4b38549ad1497b 515 PANTHER PTHR23150 170 342 2.6E-24 T 23-04-2016 LT40_RS01545 46d6afc9d7a269a765aed53babc779bb 144 SUPERFAMILY SSF54593 8 134 4.3E-22 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS01545 46d6afc9d7a269a765aed53babc779bb 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 130 2.8E-5 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LT40_RS01545 46d6afc9d7a269a765aed53babc779bb 144 Gene3D G3DSA:3.10.180.10 4 136 2.8E-45 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS11595 27c73cdce13d89bfb193d749ea8f7e51 196 Pfam PF06684 Amino acid synthesis 5 181 7.4E-71 T 23-04-2016 IPR009569 Amino acid synthesis, putative LT40_RS11595 27c73cdce13d89bfb193d749ea8f7e51 196 Gene3D G3DSA:3.30.1330.110 1 191 1.1E-83 T 23-04-2016 IPR009569 Amino acid synthesis, putative LT40_RS11595 27c73cdce13d89bfb193d749ea8f7e51 196 SUPERFAMILY SSF160519 1 190 1.96E-69 T 23-04-2016 IPR009569 Amino acid synthesis, putative LT40_RS02995 f0f67e40187d7d7649200d246c12dd97 237 SUPERFAMILY SSF161098 37 220 4.84E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02995 f0f67e40187d7d7649200d246c12dd97 237 PANTHER PTHR30151:SF23 28 236 3.3E-78 T 23-04-2016 LT40_RS02995 f0f67e40187d7d7649200d246c12dd97 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 228 2.3E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02995 f0f67e40187d7d7649200d246c12dd97 237 Gene3D G3DSA:1.10.3720.10 36 226 2.2E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02995 f0f67e40187d7d7649200d246c12dd97 237 PANTHER PTHR30151 28 236 3.3E-78 T 23-04-2016 LT40_RS03250 69eb10c267c6ec5f44316d3acc59bf4a 450 Pfam PF04966 Carbohydrate-selective porin, OprB family 79 450 4.6E-116 T 23-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 LT40_RS03250 69eb10c267c6ec5f44316d3acc59bf4a 450 PANTHER PTHR37944:SF1 1 450 4.8E-173 T 23-04-2016 LT40_RS03250 69eb10c267c6ec5f44316d3acc59bf4a 450 PANTHER PTHR37944 1 450 4.8E-173 T 23-04-2016 LT40_RS11985 4e5a389e371aa6369885234f66b0c7bd 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 3.0E-26 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS11985 4e5a389e371aa6369885234f66b0c7bd 221 Gene3D G3DSA:1.10.3720.10 13 215 1.4E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11985 4e5a389e371aa6369885234f66b0c7bd 221 PANTHER PTHR30614 1 220 5.4E-60 T 23-04-2016 LT40_RS11985 4e5a389e371aa6369885234f66b0c7bd 221 SUPERFAMILY SSF161098 14 215 3.14E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11985 4e5a389e371aa6369885234f66b0c7bd 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 214 1.8E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS14355 93d45f8a07d0a80a1e710a027aef0851 320 Gene3D G3DSA:1.10.3720.10 115 317 4.9E-52 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS14355 93d45f8a07d0a80a1e710a027aef0851 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 317 1.5E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS14355 93d45f8a07d0a80a1e710a027aef0851 320 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 118 211 6.8E-27 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS14355 93d45f8a07d0a80a1e710a027aef0851 320 PANTHER PTHR30614 9 320 1.2E-117 T 23-04-2016 LT40_RS14355 93d45f8a07d0a80a1e710a027aef0851 320 PANTHER PTHR30614:SF0 9 320 1.2E-117 T 23-04-2016 LT40_RS14355 93d45f8a07d0a80a1e710a027aef0851 320 SUPERFAMILY SSF161098 118 302 4.97E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 SUPERFAMILY SSF47203 254 413 5.8E-24 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 PANTHER PTHR10909:SF300 1 394 6.5E-162 T 23-04-2016 LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 SUPERFAMILY SSF56645 40 239 1.96E-45 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 137 3.5E-9 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 PIRSF PIRSF016578 21 411 4.3E-35 T 23-04-2016 LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 TIGRFAM TIGR04022 sulfur_SfnB: sulfur acquisition oxidoreductase, SfnB family 25 416 2.4E-181 T 23-04-2016 IPR023922 Sulphate-starvation-induced SfnB LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 Gene3D G3DSA:2.40.110.10 153 232 4.7E-23 T 23-04-2016 LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 Gene3D G3DSA:1.20.140.10 233 412 6.7E-56 T 23-04-2016 LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 Gene3D G3DSA:1.10.540.10 24 129 5.1E-26 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 PANTHER PTHR10909 1 394 6.5E-162 T 23-04-2016 LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 257 391 3.0E-22 T 23-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain LT40_RS15285 fdd4b12a14a7a75132cc3e35328be15d 416 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 151 230 1.4E-8 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LT40_RS17455 8fa0295ae3dd9a1f8946e8356c990539 410 SUPERFAMILY SSF52540 20 303 6.97E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17455 8fa0295ae3dd9a1f8946e8356c990539 410 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 234 300 1.4E-8 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 LT40_RS17455 8fa0295ae3dd9a1f8946e8356c990539 410 Gene3D G3DSA:3.40.50.300 209 308 1.8E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17455 8fa0295ae3dd9a1f8946e8356c990539 410 Gene3D G3DSA:3.40.50.300 19 50 1.4E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11795 81b0b880c41f4b1f85f7ed247afd9016 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 132 3.2E-29 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 LT40_RS11795 81b0b880c41f4b1f85f7ed247afd9016 133 PANTHER PTHR30558:SF3 9 133 1.2E-33 T 23-04-2016 LT40_RS11795 81b0b880c41f4b1f85f7ed247afd9016 133 PANTHER PTHR30558 9 133 1.2E-33 T 23-04-2016 LT40_RS06835 280ec70fa6dc96884a5037e0900f3575 404 PANTHER PTHR34219 3 381 7.1E-98 T 23-04-2016 LT40_RS06835 280ec70fa6dc96884a5037e0900f3575 404 PANTHER PTHR34219:SF3 3 381 7.1E-98 T 23-04-2016 LT40_RS06835 280ec70fa6dc96884a5037e0900f3575 404 Pfam PF03929 PepSY-associated TM region 12 367 1.6E-51 T 23-04-2016 IPR005625 PepSY-associated TM protein LT40_RS02975 959ee70137e695bb5b1b498442e3655b 685 SMART SM00304 355 407 7.1E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS02975 959ee70137e695bb5b1b498442e3655b 685 PANTHER PTHR32089 170 685 4.7E-88 T 23-04-2016 LT40_RS02975 959ee70137e695bb5b1b498442e3655b 685 Gene3D G3DSA:1.10.287.950 437 651 4.3E-53 T 23-04-2016 LT40_RS02975 959ee70137e695bb5b1b498442e3655b 685 SUPERFAMILY SSF58104 375 684 1.44E-65 T 23-04-2016 LT40_RS02975 959ee70137e695bb5b1b498442e3655b 685 Pfam PF00672 HAMP domain 337 403 1.4E-7 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS02975 959ee70137e695bb5b1b498442e3655b 685 SMART SM00283 422 683 8.0E-59 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS02975 959ee70137e695bb5b1b498442e3655b 685 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 478 682 5.5E-44 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS03180 07318cf95365208dd8d64bca6677376b 136 PIRSF PIRSF016789 15 135 5.1E-31 T 23-04-2016 IPR007401 Protein of unknown function DUF454 LT40_RS03180 07318cf95365208dd8d64bca6677376b 136 PANTHER PTHR35813:SF1 3 131 7.6E-30 T 23-04-2016 LT40_RS03180 07318cf95365208dd8d64bca6677376b 136 Pfam PF04304 Protein of unknown function (DUF454) 16 130 2.3E-35 T 23-04-2016 IPR007401 Protein of unknown function DUF454 LT40_RS03180 07318cf95365208dd8d64bca6677376b 136 PANTHER PTHR35813 3 131 7.6E-30 T 23-04-2016 LT40_RS10190 3aa25de50ffa467d8297b91b1c0f709b 357 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 5 351 1.4E-161 T 23-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 LT40_RS10190 3aa25de50ffa467d8297b91b1c0f709b 357 PANTHER PTHR13748 1 357 9.2E-149 T 23-04-2016 LT40_RS10190 3aa25de50ffa467d8297b91b1c0f709b 357 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 275 355 7.6E-18 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LT40_RS10190 3aa25de50ffa467d8297b91b1c0f709b 357 SUPERFAMILY SSF52540 6 248 5.7E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10190 3aa25de50ffa467d8297b91b1c0f709b 357 SMART SM00833 266 355 4.6E-6 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LT40_RS10190 3aa25de50ffa467d8297b91b1c0f709b 357 Gene3D G3DSA:3.40.50.300 6 231 3.5E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10190 3aa25de50ffa467d8297b91b1c0f709b 357 SUPERFAMILY SSF90002 267 355 5.89E-19 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LT40_RS10190 3aa25de50ffa467d8297b91b1c0f709b 357 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 215 1.0E-59 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain LT40_RS10190 3aa25de50ffa467d8297b91b1c0f709b 357 Gene3D G3DSA:3.30.1220.10 244 355 2.6E-29 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal LT40_RS10190 3aa25de50ffa467d8297b91b1c0f709b 357 PANTHER PTHR13748:SF10 1 357 9.2E-149 T 23-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 LT40_RS19920 3ab649f468c203e0b9f62a1e0e30a015 503 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 7 485 3.3E-237 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 LT40_RS19920 3ab649f468c203e0b9f62a1e0e30a015 503 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 6 492 2.2E-226 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 LT40_RS19920 3ab649f468c203e0b9f62a1e0e30a015 503 PANTHER PTHR13847:SF214 1 403 1.1E-198 T 23-04-2016 LT40_RS19920 3ab649f468c203e0b9f62a1e0e30a015 503 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 3 492 50.842 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 LT40_RS19920 3ab649f468c203e0b9f62a1e0e30a015 503 PANTHER PTHR13847 1 403 1.1E-198 T 23-04-2016 LT40_RS19920 3ab649f468c203e0b9f62a1e0e30a015 503 Gene3D G3DSA:3.50.50.60 5 73 4.5E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19920 3ab649f468c203e0b9f62a1e0e30a015 503 Gene3D G3DSA:3.50.50.60 148 330 4.5E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19920 3ab649f468c203e0b9f62a1e0e30a015 503 SUPERFAMILY SSF51905 5 324 5.61E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS03535 db0c400d4b9305967f17d72a071fdab8 251 Gene3D G3DSA:1.25.40.10 36 238 3.8E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS03535 db0c400d4b9305967f17d72a071fdab8 251 Pfam PF13424 Tetratricopeptide repeat 103 170 4.1E-10 T 23-04-2016 LT40_RS03535 db0c400d4b9305967f17d72a071fdab8 251 PANTHER PTHR23083 37 249 1.1E-20 T 23-04-2016 LT40_RS03535 db0c400d4b9305967f17d72a071fdab8 251 Pfam PF13181 Tetratricopeptide repeat 37 68 0.019 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS03535 db0c400d4b9305967f17d72a071fdab8 251 SMART SM00028 36 69 1.6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS03535 db0c400d4b9305967f17d72a071fdab8 251 SMART SM00028 70 103 21.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS03535 db0c400d4b9305967f17d72a071fdab8 251 SMART SM00028 139 172 23.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS03535 db0c400d4b9305967f17d72a071fdab8 251 SMART SM00028 173 206 310.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS03535 db0c400d4b9305967f17d72a071fdab8 251 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 7 238 7.5E-75 T 23-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW LT40_RS03535 db0c400d4b9305967f17d72a071fdab8 251 SUPERFAMILY SSF48452 37 204 2.47E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS14800 a348a007563b186830b96b4ecb84bf2a 275 Pfam PF13566 Domain of unknown function (DUF4130 73 239 3.8E-38 T 23-04-2016 IPR025404 Domain of unknown function DUF4130 LT40_RS14800 a348a007563b186830b96b4ecb84bf2a 275 PANTHER PTHR33693:SF3 141 253 7.0E-21 T 23-04-2016 LT40_RS14800 a348a007563b186830b96b4ecb84bf2a 275 PANTHER PTHR33693 141 253 7.0E-21 T 23-04-2016 LT40_RS14800 a348a007563b186830b96b4ecb84bf2a 275 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 4 239 1.2E-57 T 23-04-2016 IPR023875 DNA metabolism protein, putative LT40_RS14205 127b17bf700f72b73796d4b1b2ec7826 367 Pfam PF01761 3-dehydroquinate synthase 65 323 3.5E-107 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LT40_RS14205 127b17bf700f72b73796d4b1b2ec7826 367 Gene3D G3DSA:1.20.1090.10 171 355 2.9E-64 T 23-04-2016 LT40_RS14205 127b17bf700f72b73796d4b1b2ec7826 367 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 356 42.754 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LT40_RS14205 127b17bf700f72b73796d4b1b2ec7826 367 PIRSF PIRSF001455 3 361 3.5E-104 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LT40_RS14205 127b17bf700f72b73796d4b1b2ec7826 367 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 351 1.7E-114 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 LT40_RS14205 127b17bf700f72b73796d4b1b2ec7826 367 SUPERFAMILY SSF56796 4 355 1.11E-118 T 23-04-2016 LT40_RS14205 127b17bf700f72b73796d4b1b2ec7826 367 Gene3D G3DSA:3.40.50.1970 2 170 7.7E-69 T 23-04-2016 LT40_RS14205 127b17bf700f72b73796d4b1b2ec7826 367 PANTHER PTHR21090 1 359 2.2E-200 T 23-04-2016 LT40_RS16260 fbc26cad49c0d6697af967ef475b0260 291 Gene3D G3DSA:1.10.10.10 2 77 2.6E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16260 fbc26cad49c0d6697af967ef475b0260 291 SUPERFAMILY SSF46689 2 76 3.94E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS16260 fbc26cad49c0d6697af967ef475b0260 291 Pfam PF01380 SIS domain 127 252 1.0E-14 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LT40_RS16260 fbc26cad49c0d6697af967ef475b0260 291 PANTHER PTHR30514 2 278 2.9E-92 T 23-04-2016 LT40_RS16260 fbc26cad49c0d6697af967ef475b0260 291 Gene3D G3DSA:3.40.50.10490 97 263 1.4E-31 T 23-04-2016 LT40_RS16260 fbc26cad49c0d6697af967ef475b0260 291 SUPERFAMILY SSF53697 85 279 1.13E-35 T 23-04-2016 LT40_RS16260 fbc26cad49c0d6697af967ef475b0260 291 PANTHER PTHR30514:SF1 2 278 2.9E-92 T 23-04-2016 LT40_RS16260 fbc26cad49c0d6697af967ef475b0260 291 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 76 2.4E-21 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LT40_RS14255 f2104004469c4dac4f1f4aeddc8c3572 268 PANTHER PTHR12302:SF0 31 169 1.9E-26 T 23-04-2016 LT40_RS14255 f2104004469c4dac4f1f4aeddc8c3572 268 SMART SM00318 37 168 1.5E-14 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold LT40_RS14255 f2104004469c4dac4f1f4aeddc8c3572 268 SUPERFAMILY SSF50199 31 169 2.22E-28 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold LT40_RS14255 f2104004469c4dac4f1f4aeddc8c3572 268 Gene3D G3DSA:2.40.50.90 38 136 5.9E-23 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold LT40_RS14255 f2104004469c4dac4f1f4aeddc8c3572 268 ProSitePatterns PS01284 Thermonuclease family signature 2. 109 119 - T 23-04-2016 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 LT40_RS14255 f2104004469c4dac4f1f4aeddc8c3572 268 Pfam PF00565 Staphylococcal nuclease homologue 60 168 5.7E-17 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold LT40_RS14255 f2104004469c4dac4f1f4aeddc8c3572 268 PANTHER PTHR12302 31 169 1.9E-26 T 23-04-2016 LT40_RS06640 c4d2e095a2429aea6d017028ce9d3201 215 Pfam PF00551 Formyl transferase 6 184 4.3E-62 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS06640 c4d2e095a2429aea6d017028ce9d3201 215 Gene3D G3DSA:3.40.50.170 6 193 1.0E-71 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS06640 c4d2e095a2429aea6d017028ce9d3201 215 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS06640 c4d2e095a2429aea6d017028ce9d3201 215 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 190 31.954 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 LT40_RS06640 c4d2e095a2429aea6d017028ce9d3201 215 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 192 1.2E-73 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 LT40_RS06640 c4d2e095a2429aea6d017028ce9d3201 215 SUPERFAMILY SSF53328 6 201 1.44E-65 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LT40_RS06640 c4d2e095a2429aea6d017028ce9d3201 215 PANTHER PTHR10520 6 196 2.0E-95 T 23-04-2016 LT40_RS17190 f497cfb7d243d76ec49c691635f26807 160 SUPERFAMILY SSF50630 9 144 1.0E-42 T 23-04-2016 IPR021109 Aspartic peptidase domain LT40_RS17190 f497cfb7d243d76ec49c691635f26807 160 Pfam PF05618 Putative ATP-dependant zinc protease 9 147 2.4E-45 T 23-04-2016 LT40_RS17190 f497cfb7d243d76ec49c691635f26807 160 Gene3D G3DSA:2.40.70.10 8 135 2.4E-43 T 23-04-2016 IPR021109 Aspartic peptidase domain LT40_RS17190 f497cfb7d243d76ec49c691635f26807 160 PANTHER PTHR38037 1 157 3.5E-61 T 23-04-2016 LT40_RS10105 d763fd3bad515b58655ce5eae052d2ea 134 Gene3D G3DSA:3.30.565.10 7 131 3.1E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10105 d763fd3bad515b58655ce5eae052d2ea 134 SUPERFAMILY SSF55874 26 131 3.15E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS10105 d763fd3bad515b58655ce5eae052d2ea 134 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 131 1.6E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS14955 314c65b004f08e934369450666f0da9b 396 Pfam PF13679 Methyltransferase domain 108 228 4.6E-12 T 23-04-2016 IPR025714 Methyltransferase domain LT40_RS14955 314c65b004f08e934369450666f0da9b 396 PANTHER PTHR13369 328 395 1.1E-71 T 23-04-2016 LT40_RS14955 314c65b004f08e934369450666f0da9b 396 PANTHER PTHR13369 100 248 1.1E-71 T 23-04-2016 LT40_RS14955 314c65b004f08e934369450666f0da9b 396 SUPERFAMILY SSF53335 125 220 2.36E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14955 314c65b004f08e934369450666f0da9b 396 PANTHER PTHR13369:SF1 328 395 1.1E-71 T 23-04-2016 LT40_RS14955 314c65b004f08e934369450666f0da9b 396 PANTHER PTHR13369:SF1 100 248 1.1E-71 T 23-04-2016 LT40_RS02380 78b1e220e3c94fe8cb9243b8d9e29c11 97 Pfam PF05400 Flagellar protein FliT 16 93 7.4E-10 T 23-04-2016 IPR008622 Flagellar protein FliT LT40_RS02380 78b1e220e3c94fe8cb9243b8d9e29c11 97 Gene3D G3DSA:1.20.58.380 5 84 2.0E-4 T 23-04-2016 LT40_RS05180 c2442a3a7a5a1301a7f3fcfb55860cc2 103 PANTHER PTHR38598 2 103 3.4E-43 T 23-04-2016 LT40_RS05180 c2442a3a7a5a1301a7f3fcfb55860cc2 103 Pfam PF04341 Protein of unknown function, DUF485 10 98 4.4E-34 T 23-04-2016 IPR007436 Protein of unknown function DUF485 LT40_RS16645 d44c7c85185a6acb5e26712a1b61a530 663 Gene3D G3DSA:1.10.287.950 412 624 4.7E-54 T 23-04-2016 LT40_RS16645 d44c7c85185a6acb5e26712a1b61a530 663 Pfam PF17201 Cache 3/Cache 2 fusion domain 39 307 1.0E-77 T 23-04-2016 IPR033462 Cache 3/Cache 2 fusion domain LT40_RS16645 d44c7c85185a6acb5e26712a1b61a530 663 Pfam PF00672 HAMP domain 311 378 1.7E-17 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS16645 d44c7c85185a6acb5e26712a1b61a530 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 454 657 9.6E-48 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS16645 d44c7c85185a6acb5e26712a1b61a530 663 SUPERFAMILY SSF58104 350 659 3.14E-72 T 23-04-2016 LT40_RS16645 d44c7c85185a6acb5e26712a1b61a530 663 Gene3D G3DSA:3.30.450.20 184 302 1.0E-6 T 23-04-2016 LT40_RS16645 d44c7c85185a6acb5e26712a1b61a530 663 SUPERFAMILY SSF103190 113 211 1.84E-12 T 23-04-2016 IPR029151 Periplasmic sensor domain-like LT40_RS16645 d44c7c85185a6acb5e26712a1b61a530 663 PANTHER PTHR32089:SF28 117 661 3.3E-128 T 23-04-2016 LT40_RS16645 d44c7c85185a6acb5e26712a1b61a530 663 SMART SM00283 397 658 8.8E-66 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS16645 d44c7c85185a6acb5e26712a1b61a530 663 SMART SM00304 330 382 3.1E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS16645 d44c7c85185a6acb5e26712a1b61a530 663 PANTHER PTHR32089 117 661 3.3E-128 T 23-04-2016 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 Pfam PF08521 Two-component sensor kinase N-terminal 19 167 4.5E-39 T 23-04-2016 IPR013727 Two-component sensor kinase, N-terminal LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 419 2.1E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 2.1E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 2.1E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 Pfam PF00672 HAMP domain 180 239 7.3E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 SMART SM00387 357 460 5.0E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 PANTHER PTHR24423 185 458 1.1E-66 T 23-04-2016 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 PANTHER PTHR24423 1 22 1.1E-66 T 23-04-2016 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 Gene3D G3DSA:3.30.565.10 319 458 2.7E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 SUPERFAMILY SSF47384 227 309 1.92E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 SMART SM00388 244 309 9.0E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 PANTHER PTHR24423:SF474 185 458 1.1E-66 T 23-04-2016 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 PANTHER PTHR24423:SF474 1 22 1.1E-66 T 23-04-2016 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 Gene3D G3DSA:1.10.287.130 237 305 4.0E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 457 5.5E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 309 4.5E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS04575 687c6ac010001494a79f45f28bc92016 460 SUPERFAMILY SSF55874 298 458 6.81E-32 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS13495 46a603588c45c33327e5aaf79eaebba8 243 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 103 135 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 LT40_RS13495 46a603588c45c33327e5aaf79eaebba8 243 PANTHER PTHR21091:SF127 4 218 4.0E-70 T 23-04-2016 LT40_RS13495 46a603588c45c33327e5aaf79eaebba8 243 SUPERFAMILY SSF53790 4 238 4.19E-48 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS13495 46a603588c45c33327e5aaf79eaebba8 243 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 221 1.7E-45 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 LT40_RS13495 46a603588c45c33327e5aaf79eaebba8 243 PANTHER PTHR21091 4 218 4.0E-70 T 23-04-2016 LT40_RS13495 46a603588c45c33327e5aaf79eaebba8 243 Gene3D G3DSA:3.40.1010.10 4 136 9.4E-32 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 LT40_RS13495 46a603588c45c33327e5aaf79eaebba8 243 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 5 237 5.8E-67 T 23-04-2016 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 LT40_RS13495 46a603588c45c33327e5aaf79eaebba8 243 PIRSF PIRSF036427 4 243 5.9E-71 T 23-04-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 LT40_RS17105 66087a81d773da97dbcd0b220f983217 221 Gene3D G3DSA:1.10.3720.10 11 216 2.4E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17105 66087a81d773da97dbcd0b220f983217 221 SUPERFAMILY SSF161098 13 216 8.63E-50 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17105 66087a81d773da97dbcd0b220f983217 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.5E-34 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS17105 66087a81d773da97dbcd0b220f983217 221 PANTHER PTHR30614 5 220 1.1E-117 T 23-04-2016 LT40_RS17105 66087a81d773da97dbcd0b220f983217 221 PANTHER PTHR30614:SF18 5 220 1.1E-117 T 23-04-2016 LT40_RS17105 66087a81d773da97dbcd0b220f983217 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 215 3.9E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15105 e7d0cf0a419f74b6e4c28500187190f3 151 SUPERFAMILY SSF143880 4 87 1.57E-14 T 23-04-2016 IPR018841 Protein of unknown function DUF2442 LT40_RS15105 e7d0cf0a419f74b6e4c28500187190f3 151 SUPERFAMILY SSF47413 93 147 1.33E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS15105 e7d0cf0a419f74b6e4c28500187190f3 151 Gene3D G3DSA:3.30.2020.10 2 86 1.9E-21 T 23-04-2016 IPR018841 Protein of unknown function DUF2442 LT40_RS15105 e7d0cf0a419f74b6e4c28500187190f3 151 Pfam PF13560 Helix-turn-helix domain 98 134 1.3E-6 T 23-04-2016 LT40_RS15105 e7d0cf0a419f74b6e4c28500187190f3 151 Pfam PF10387 Protein of unknown function (DUF2442) 11 80 8.3E-5 T 23-04-2016 IPR018841 Protein of unknown function DUF2442 LT40_RS15105 e7d0cf0a419f74b6e4c28500187190f3 151 Gene3D G3DSA:1.10.260.40 90 149 4.5E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS11350 b92fae8ba0177e1aeb1b261fcd166477 441 Gene3D G3DSA:3.20.20.60 7 423 2.7E-167 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS11350 b92fae8ba0177e1aeb1b261fcd166477 441 PIRSF PIRSF001362 1 441 5.3E-228 T 23-04-2016 LT40_RS11350 b92fae8ba0177e1aeb1b261fcd166477 441 SUPERFAMILY SSF51621 6 440 6.73E-156 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS11350 b92fae8ba0177e1aeb1b261fcd166477 441 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 12 267 4.8E-111 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 LT40_RS11350 b92fae8ba0177e1aeb1b261fcd166477 441 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 265 440 9.4E-84 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 LT40_RS11350 b92fae8ba0177e1aeb1b261fcd166477 441 ProSitePatterns PS00161 Isocitrate lyase signature. 201 206 - T 23-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 LT40_RS11350 b92fae8ba0177e1aeb1b261fcd166477 441 Pfam PF00463 Isocitrate lyase family 10 267 4.7E-58 T 23-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 LT40_RS11350 b92fae8ba0177e1aeb1b261fcd166477 441 PANTHER PTHR21631 3 441 1.6E-169 T 23-04-2016 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 284 2.0E-94 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 Gene3D G3DSA:1.10.8.10 2 55 1.0E-24 T 23-04-2016 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 Pfam PF00889 Elongation factor TS 73 267 2.0E-54 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 SUPERFAMILY SSF46934 4 54 1.53E-16 T 23-04-2016 IPR009060 UBA-like GO:0005515 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 Hamap MF_00050 Elongation factor Ts [tsf]. 1 284 69.571 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 PANTHER PTHR11741 1 287 6.2E-112 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 Gene3D G3DSA:3.30.479.20 144 180 4.9E-27 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 Gene3D G3DSA:3.30.479.20 231 266 4.9E-27 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 SUPERFAMILY SSF54713 144 284 6.45E-46 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 Gene3D G3DSA:1.10.286.20 186 230 1.9E-13 T 23-04-2016 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 LT40_RS00415 32e3343335cffeb2c2b20476a8dcb4c3 290 SUPERFAMILY SSF54713 56 141 1.6E-13 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 LT40_RS05230 5b23319806b7c8e31e039784463ca203 371 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 31 358 2.3E-24 T 23-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 LT40_RS05230 5b23319806b7c8e31e039784463ca203 371 SUPERFAMILY SSF53187 16 110 7.28E-43 T 23-04-2016 LT40_RS05230 5b23319806b7c8e31e039784463ca203 371 SUPERFAMILY SSF53187 141 362 7.28E-43 T 23-04-2016 LT40_RS05230 5b23319806b7c8e31e039784463ca203 371 Gene3D G3DSA:3.40.630.10 19 264 9.7E-15 T 23-04-2016 LT40_RS07805 4575cc0d5046dc0667ee768477aecadd 228 Gene3D G3DSA:1.25.40.10 7 160 5.5E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS07805 4575cc0d5046dc0667ee768477aecadd 228 SUPERFAMILY SSF48452 3 159 2.35E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS07805 4575cc0d5046dc0667ee768477aecadd 228 Pfam PF14559 Tetratricopeptide repeat 42 99 2.7E-6 T 23-04-2016 LT40_RS08945 8373fa9541e3a174779383f18a660f19 353 PANTHER PTHR30465:SF66 1 348 5.2E-195 T 23-04-2016 LT40_RS08945 8373fa9541e3a174779383f18a660f19 353 Gene3D G3DSA:1.10.3720.10 114 338 7.2E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS08945 8373fa9541e3a174779383f18a660f19 353 PANTHER PTHR30465 1 348 5.2E-195 T 23-04-2016 LT40_RS08945 8373fa9541e3a174779383f18a660f19 353 SUPERFAMILY SSF161098 115 331 7.19E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS08945 8373fa9541e3a174779383f18a660f19 353 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 139 346 1.4E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05345 089f87fb397e10e04358e21b820e9809 224 Pfam PF00929 Exonuclease 32 206 5.9E-33 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS05345 089f87fb397e10e04358e21b820e9809 224 PANTHER PTHR30231 18 221 1.0E-114 T 23-04-2016 LT40_RS05345 089f87fb397e10e04358e21b820e9809 224 SMART SM00479 30 215 1.3E-21 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III LT40_RS05345 089f87fb397e10e04358e21b820e9809 224 TIGRFAM TIGR01298 RNaseT: ribonuclease T 22 220 5.8E-113 T 23-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 LT40_RS05345 089f87fb397e10e04358e21b820e9809 224 Gene3D G3DSA:3.30.420.10 22 220 2.1E-57 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS05345 089f87fb397e10e04358e21b820e9809 224 Hamap MF_00157 Ribonuclease T [rnt]. 1 224 110.444 T 23-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 LT40_RS05345 089f87fb397e10e04358e21b820e9809 224 PANTHER PTHR30231:SF2 18 221 1.0E-114 T 23-04-2016 LT40_RS05345 089f87fb397e10e04358e21b820e9809 224 SUPERFAMILY SSF53098 21 219 7.59E-56 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS20320 0bb9f63ae4df3cbeae376cb8ad7eecfb 66 PANTHER PTHR35175 7 62 3.6E-17 T 23-04-2016 LT40_RS20320 0bb9f63ae4df3cbeae376cb8ad7eecfb 66 Pfam PF06945 Protein of unknown function (DUF1289) 10 55 2.2E-20 T 23-04-2016 IPR010710 Protein of unknown function DUF1289 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 SMART SM00028 527 559 460.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 SMART SM00028 493 526 0.016 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 SMART SM00028 458 492 44.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 SMART SM00028 288 321 190.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 SMART SM00028 390 423 270.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 SMART SM00028 424 457 180.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 SMART SM00028 355 388 410.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 SMART SM00028 220 253 310.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 SUPERFAMILY SSF48452 391 561 9.96E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 Gene3D G3DSA:1.25.40.10 115 335 3.9E-20 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 Gene3D G3DSA:1.25.40.10 336 560 1.9E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 Pfam PF13432 Tetratricopeptide repeat 430 493 1.7E-5 T 23-04-2016 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 Pfam PF13432 Tetratricopeptide repeat 304 347 2.5E-4 T 23-04-2016 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 Pfam PF13432 Tetratricopeptide repeat 500 560 3.2E-6 T 23-04-2016 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 PANTHER PTHR23083 47 54 2.0E-71 T 23-04-2016 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 PANTHER PTHR23083 81 574 2.0E-71 T 23-04-2016 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 SUPERFAMILY SSF48452 115 273 3.41E-13 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 SUPERFAMILY SSF48452 237 433 4.68E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 PANTHER PTHR23083:SF195 47 54 2.0E-71 T 23-04-2016 LT40_RS19825 061063dc14f8557d2323487ac413600b 575 PANTHER PTHR23083:SF195 81 574 2.0E-71 T 23-04-2016 LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 Gene3D G3DSA:3.40.190.10 177 258 3.3E-24 T 23-04-2016 LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.4E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.4E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.4E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 9.9E-19 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 Pfam PF03466 LysR substrate binding domain 88 291 6.4E-48 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 Gene3D G3DSA:3.40.190.10 92 176 4.4E-25 T 23-04-2016 LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 PANTHER PTHR30537 1 292 1.2E-118 T 23-04-2016 LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 SUPERFAMILY SSF53850 89 293 1.4E-51 T 23-04-2016 LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 Gene3D G3DSA:1.10.10.10 4 85 9.4E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 PANTHER PTHR30537:SF5 1 292 1.2E-118 T 23-04-2016 LT40_RS12285 e13d7914097b540b56959aa97e063eff 294 SUPERFAMILY SSF46785 4 111 2.36E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10600 e4ad43665b79a892a0ace56bd08fd1c0 436 SUPERFAMILY SSF53850 24 407 3.34E-80 T 23-04-2016 LT40_RS10600 e4ad43665b79a892a0ace56bd08fd1c0 436 Gene3D G3DSA:3.40.190.10 21 89 6.6E-5 T 23-04-2016 LT40_RS10600 e4ad43665b79a892a0ace56bd08fd1c0 436 Gene3D G3DSA:3.40.190.10 138 350 3.3E-54 T 23-04-2016 LT40_RS10600 e4ad43665b79a892a0ace56bd08fd1c0 436 PANTHER PTHR30061 22 433 2.1E-144 T 23-04-2016 LT40_RS10600 e4ad43665b79a892a0ace56bd08fd1c0 436 PANTHER PTHR30061:SF3 22 433 2.1E-144 T 23-04-2016 LT40_RS10600 e4ad43665b79a892a0ace56bd08fd1c0 436 Pfam PF01547 Bacterial extracellular solute-binding protein 44 325 6.6E-55 T 23-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 LT40_RS12615 04c8d1769f393336b67e9ae51f97ae67 83 PANTHER PTHR36931 1 83 1.7E-34 T 23-04-2016 LT40_RS12615 04c8d1769f393336b67e9ae51f97ae67 83 Pfam PF03692 Putative zinc- or iron-chelating domain 3 59 3.9E-5 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein LT40_RS06930 0a7c2ec530642b31c737aa0a407e286d 242 SUPERFAMILY SSF56300 1 107 7.43E-25 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS06930 0a7c2ec530642b31c737aa0a407e286d 242 SUPERFAMILY SSF56300 146 232 7.43E-25 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS06930 0a7c2ec530642b31c737aa0a407e286d 242 PANTHER PTHR37844 1 242 2.3E-23 T 23-04-2016 LT40_RS06930 0a7c2ec530642b31c737aa0a407e286d 242 Gene3D G3DSA:3.60.21.10 1 63 7.0E-14 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS06930 0a7c2ec530642b31c737aa0a407e286d 242 Gene3D G3DSA:3.60.21.10 138 220 7.0E-14 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS06930 0a7c2ec530642b31c737aa0a407e286d 242 Pfam PF00149 Calcineurin-like phosphoesterase 2 208 1.2E-11 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LT40_RS09090 0087ce6781b1e7b20252c0e7f5a552d1 360 Gene3D G3DSA:3.40.50.720 14 209 3.8E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09090 0087ce6781b1e7b20252c0e7f5a552d1 360 Gene3D G3DSA:3.90.25.10 210 354 2.2E-36 T 23-04-2016 LT40_RS09090 0087ce6781b1e7b20252c0e7f5a552d1 360 SUPERFAMILY SSF51735 13 338 1.64E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS09090 0087ce6781b1e7b20252c0e7f5a552d1 360 PANTHER PTHR10366:SF33 15 356 1.1E-119 T 23-04-2016 LT40_RS09090 0087ce6781b1e7b20252c0e7f5a552d1 360 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 13 354 7.4E-129 T 23-04-2016 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833|UniPathway: UPA00055|UniPathway: UPA00281 LT40_RS09090 0087ce6781b1e7b20252c0e7f5a552d1 360 PANTHER PTHR10366 15 356 1.1E-119 T 23-04-2016 LT40_RS09090 0087ce6781b1e7b20252c0e7f5a552d1 360 Pfam PF16363 GDP-mannose 4,6 dehydratase 17 329 1.7E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS01135 50a6387880b49073594b5e866369ff03 410 SUPERFAMILY SSF53633 4 241 1.11E-73 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS01135 50a6387880b49073594b5e866369ff03 410 Pfam PF13840 ACT domain 339 398 4.0E-15 T 23-04-2016 IPR027795 GATS-like ACT domain LT40_RS01135 50a6387880b49073594b5e866369ff03 410 PIRSF PIRSF000726 59 409 1.2E-150 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS01135 50a6387880b49073594b5e866369ff03 410 Pfam PF01842 ACT domain 267 324 3.4E-11 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 LT40_RS01135 50a6387880b49073594b5e866369ff03 410 SUPERFAMILY SSF55021 329 404 1.05E-24 T 23-04-2016 LT40_RS01135 50a6387880b49073594b5e866369ff03 410 Pfam PF00696 Amino acid kinase family 3 229 1.1E-48 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS01135 50a6387880b49073594b5e866369ff03 410 PANTHER PTHR21499:SF27 1 408 6.1E-177 T 23-04-2016 LT40_RS01135 50a6387880b49073594b5e866369ff03 410 Gene3D G3DSA:3.40.1160.10 1 246 1.3E-74 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 LT40_RS01135 50a6387880b49073594b5e866369ff03 410 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 402 2.4E-119 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS01135 50a6387880b49073594b5e866369ff03 410 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 403 2.5E-133 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS01135 50a6387880b49073594b5e866369ff03 410 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 LT40_RS01135 50a6387880b49073594b5e866369ff03 410 SUPERFAMILY SSF55021 248 325 4.37E-19 T 23-04-2016 LT40_RS01135 50a6387880b49073594b5e866369ff03 410 PANTHER PTHR21499 1 408 6.1E-177 T 23-04-2016 LT40_RS09215 073dfeac8ab08ac5bed5cd270c288fe8 336 Pfam PF00953 Glycosyl transferase family 4 76 225 7.9E-31 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS09215 073dfeac8ab08ac5bed5cd270c288fe8 336 PANTHER PTHR22926 7 293 1.1E-61 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 LT40_RS09215 073dfeac8ab08ac5bed5cd270c288fe8 336 PANTHER PTHR22926:SF3 7 293 1.1E-61 T 23-04-2016 LT40_RS16720 f6ee1c5f76696b21f7c96208e8c0689a 235 SUPERFAMILY SSF55781 84 224 6.76E-5 T 23-04-2016 IPR029016 GAF domain-like LT40_RS16720 f6ee1c5f76696b21f7c96208e8c0689a 235 PANTHER PTHR38765 2 235 1.9E-70 T 23-04-2016 LT40_RS16720 f6ee1c5f76696b21f7c96208e8c0689a 235 Pfam PF04340 Protein of unknown function, DUF484 12 228 1.7E-68 T 23-04-2016 IPR007435 Protein of unknown function DUF484 LT40_RS13835 7dacbf0342686c58e55f5e4d5b2bcd3c 293 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 227 237 - T 23-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site LT40_RS13835 7dacbf0342686c58e55f5e4d5b2bcd3c 293 SUPERFAMILY SSF53613 25 287 2.5E-73 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS13835 7dacbf0342686c58e55f5e4d5b2bcd3c 293 PANTHER PTHR12592 28 290 1.5E-66 T 23-04-2016 LT40_RS13835 7dacbf0342686c58e55f5e4d5b2bcd3c 293 PANTHER PTHR12592:SF0 28 290 1.5E-66 T 23-04-2016 LT40_RS13835 7dacbf0342686c58e55f5e4d5b2bcd3c 293 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 21 290 21.611 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 LT40_RS13835 7dacbf0342686c58e55f5e4d5b2bcd3c 293 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 27 285 4.7E-68 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 LT40_RS13835 7dacbf0342686c58e55f5e4d5b2bcd3c 293 Pfam PF01256 Carbohydrate kinase 44 265 2.3E-60 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 LT40_RS13835 7dacbf0342686c58e55f5e4d5b2bcd3c 293 Gene3D G3DSA:3.40.1190.20 28 287 8.8E-85 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS15580 2bfce003cbec4b443571a12326df6464 70 Pfam PF06568 Domain of unknown function (DUF1127) 26 59 3.4E-9 T 23-04-2016 IPR009506 Protein of unknown function DUF1127 LT40_RS03460 0eef8af83ba70d6c3b3a875263d258e2 225 SUPERFAMILY SSF56235 1 223 4.32E-76 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS03460 0eef8af83ba70d6c3b3a875263d258e2 225 PANTHER PTHR39328:SF1 2 221 1.8E-66 T 23-04-2016 LT40_RS03460 0eef8af83ba70d6c3b3a875263d258e2 225 Gene3D G3DSA:3.60.20.10 1 213 9.4E-80 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS03460 0eef8af83ba70d6c3b3a875263d258e2 225 Pfam PF06267 Family of unknown function (DUF1028) 2 191 4.3E-65 T 23-04-2016 IPR010430 Protein of unknown function DUF1028 LT40_RS03460 0eef8af83ba70d6c3b3a875263d258e2 225 PANTHER PTHR39328 2 221 1.8E-66 T 23-04-2016 LT40_RS05385 b9ab337677ce9e52685dc2c2eb9f6a98 271 SUPERFAMILY SSF54862 5 131 6.8E-26 T 23-04-2016 LT40_RS05385 b9ab337677ce9e52685dc2c2eb9f6a98 271 PANTHER PTHR11938:SF64 3 130 3.5E-57 T 23-04-2016 LT40_RS05385 b9ab337677ce9e52685dc2c2eb9f6a98 271 Gene3D G3DSA:3.30.70.20 15 35 3.2E-4 T 23-04-2016 LT40_RS05385 b9ab337677ce9e52685dc2c2eb9f6a98 271 Gene3D G3DSA:3.30.70.20 74 85 3.2E-4 T 23-04-2016 LT40_RS05385 b9ab337677ce9e52685dc2c2eb9f6a98 271 Gene3D G3DSA:3.30.70.20 86 157 3.3E-15 T 23-04-2016 LT40_RS05385 b9ab337677ce9e52685dc2c2eb9f6a98 271 PANTHER PTHR11938 3 130 3.5E-57 T 23-04-2016 LT40_RS05385 b9ab337677ce9e52685dc2c2eb9f6a98 271 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 111 122 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS05385 b9ab337677ce9e52685dc2c2eb9f6a98 271 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 81 92 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site LT40_RS05385 b9ab337677ce9e52685dc2c2eb9f6a98 271 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 3 137 1.3E-62 T 23-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 LT40_RS05385 b9ab337677ce9e52685dc2c2eb9f6a98 271 Pfam PF04060 Putative Fe-S cluster 11 42 1.2E-11 T 23-04-2016 IPR007202 4Fe-4S domain GO:0051536 LT40_RS05385 b9ab337677ce9e52685dc2c2eb9f6a98 271 Pfam PF14697 4Fe-4S dicluster domain 74 128 1.1E-16 T 23-04-2016 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 Gene3D G3DSA:3.30.450.20 12 109 9.5E-10 T 23-04-2016 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 Gene3D G3DSA:1.10.287.130 166 224 3.0E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 339 4.9E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 382 4.9E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 363 4.9E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 325 4.9E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 SMART SM00091 9 76 2.9E-4 T 23-04-2016 IPR000014 PAS domain LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 SUPERFAMILY SSF47384 147 227 3.73E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 Pfam PF00512 His Kinase A (phospho-acceptor) domain 167 225 3.8E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 Gene3D G3DSA:3.30.565.10 233 383 5.3E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 275 383 1.3E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 SUPERFAMILY SSF55874 232 384 1.23E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 PANTHER PTHR24423 12 138 5.8E-53 T 23-04-2016 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 PANTHER PTHR24423 160 386 5.8E-53 T 23-04-2016 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 110 1.3E-9 T 23-04-2016 IPR000014 PAS domain LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 SUPERFAMILY SSF55785 12 106 1.6E-10 T 23-04-2016 IPR000014 PAS domain LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 Pfam PF00989 PAS fold 12 110 1.9E-5 T 23-04-2016 IPR013767 PAS fold GO:0006355 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 SMART SM00388 164 229 1.8E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS06265 5cbe7104cdb083c2ba2f5fcbb2d15d11 388 SMART SM00387 274 385 2.0E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS16170 1d6dd05f2132b892b2d192e8799f0170 257 SMART SM00382 30 222 1.5E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS16170 1d6dd05f2132b892b2d192e8799f0170 257 SUPERFAMILY SSF52540 5 244 1.39E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16170 1d6dd05f2132b892b2d192e8799f0170 257 PANTHER PTHR24220 7 251 4.3E-130 T 23-04-2016 LT40_RS16170 1d6dd05f2132b892b2d192e8799f0170 257 PANTHER PTHR24220:SF327 7 251 4.3E-130 T 23-04-2016 LT40_RS16170 1d6dd05f2132b892b2d192e8799f0170 257 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS16170 1d6dd05f2132b892b2d192e8799f0170 257 PIRSF PIRSF039085 2 250 1.7E-112 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LT40_RS16170 1d6dd05f2132b892b2d192e8799f0170 257 Gene3D G3DSA:3.40.50.300 5 247 1.5E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS16170 1d6dd05f2132b892b2d192e8799f0170 257 Pfam PF00005 ABC transporter 21 174 5.4E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS14770 9d15900e4a0fdb23d25653983e84f479 99 SUPERFAMILY SSF47413 3 59 6.22E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS14770 9d15900e4a0fdb23d25653983e84f479 99 SMART SM00530 8 62 1.5E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS14770 9d15900e4a0fdb23d25653983e84f479 99 Pfam PF01381 Helix-turn-helix 9 59 3.8E-9 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS14770 9d15900e4a0fdb23d25653983e84f479 99 Gene3D G3DSA:1.10.260.40 5 59 6.0E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS04655 37cd114c0d94a5d5f19c688b3a0ca374 247 Gene3D G3DSA:3.20.20.70 6 244 6.1E-105 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS04655 37cd114c0d94a5d5f19c688b3a0ca374 247 PANTHER PTHR30456:SF0 5 247 9.9E-136 T 23-04-2016 LT40_RS04655 37cd114c0d94a5d5f19c688b3a0ca374 247 PANTHER PTHR30456 5 247 9.9E-136 T 23-04-2016 LT40_RS04655 37cd114c0d94a5d5f19c688b3a0ca374 247 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 242 1.7E-94 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 LT40_RS04655 37cd114c0d94a5d5f19c688b3a0ca374 247 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 9 241 3.8E-98 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 LT40_RS04655 37cd114c0d94a5d5f19c688b3a0ca374 247 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 247 120.772 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 LT40_RS04655 37cd114c0d94a5d5f19c688b3a0ca374 247 SUPERFAMILY SSF63892 7 243 9.55E-95 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 LT40_RS19690 507ecce5121377a9ad4b57ef8c9d7185 187 Gene3D G3DSA:3.40.80.10 8 181 4.1E-68 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LT40_RS19690 507ecce5121377a9ad4b57ef8c9d7185 187 PANTHER PTHR30417:SF4 6 180 1.4E-77 T 23-04-2016 LT40_RS19690 507ecce5121377a9ad4b57ef8c9d7185 187 SUPERFAMILY SSF55846 7 180 7.85E-66 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LT40_RS19690 507ecce5121377a9ad4b57ef8c9d7185 187 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 169 7.0E-19 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LT40_RS19690 507ecce5121377a9ad4b57ef8c9d7185 187 SMART SM00644 18 168 2.3E-54 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LT40_RS19690 507ecce5121377a9ad4b57ef8c9d7185 187 PANTHER PTHR30417 6 180 1.4E-77 T 23-04-2016 LT40_RS10770 210e37847f9c70482e95756743791448 513 Gene3D G3DSA:3.30.450.20 181 278 1.7E-4 T 23-04-2016 LT40_RS10770 210e37847f9c70482e95756743791448 513 PANTHER PTHR10799 1 504 3.4E-18 T 23-04-2016 LT40_RS10770 210e37847f9c70482e95756743791448 513 Pfam PF02743 Cache domain 55 244 8.6E-18 T 23-04-2016 IPR033479 Double Cache domain 1 LT40_RS10770 210e37847f9c70482e95756743791448 513 SMART SM00267 330 506 1.7E-55 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10770 210e37847f9c70482e95756743791448 513 Pfam PF00990 Diguanylate cyclase, GGDEF domain 341 502 1.2E-41 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10770 210e37847f9c70482e95756743791448 513 Gene3D G3DSA:3.30.450.20 95 180 3.0E-16 T 23-04-2016 LT40_RS10770 210e37847f9c70482e95756743791448 513 SUPERFAMILY SSF55073 346 504 5.57E-41 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS10770 210e37847f9c70482e95756743791448 513 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 337 504 1.2E-45 T 23-04-2016 IPR000160 GGDEF domain LT40_RS10770 210e37847f9c70482e95756743791448 513 PANTHER PTHR10799:SF750 1 504 3.4E-18 T 23-04-2016 LT40_RS10770 210e37847f9c70482e95756743791448 513 Gene3D G3DSA:3.30.70.270 343 504 1.1E-46 T 23-04-2016 LT40_RS05420 e4ce8960497f72dba3332eb0d286b6fd 373 PANTHER PTHR34069 1 25 4.6E-192 T 23-04-2016 LT40_RS05420 e4ce8960497f72dba3332eb0d286b6fd 373 PANTHER PTHR34069 50 70 4.6E-192 T 23-04-2016 LT40_RS05420 e4ce8960497f72dba3332eb0d286b6fd 373 PANTHER PTHR34069:SF1 1 25 4.6E-192 T 23-04-2016 LT40_RS05420 e4ce8960497f72dba3332eb0d286b6fd 373 PANTHER PTHR34069:SF1 50 70 4.6E-192 T 23-04-2016 LT40_RS05420 e4ce8960497f72dba3332eb0d286b6fd 373 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 282 371 3.2E-22 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LT40_RS05420 e4ce8960497f72dba3332eb0d286b6fd 373 SUPERFAMILY SSF53901 3 372 3.76E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS05420 e4ce8960497f72dba3332eb0d286b6fd 373 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 150 231 2.0E-19 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 LT40_RS05420 e4ce8960497f72dba3332eb0d286b6fd 373 PANTHER PTHR34069 91 371 4.6E-192 T 23-04-2016 LT40_RS05420 e4ce8960497f72dba3332eb0d286b6fd 373 PANTHER PTHR34069:SF1 91 371 4.6E-192 T 23-04-2016 LT40_RS05420 e4ce8960497f72dba3332eb0d286b6fd 373 Gene3D G3DSA:3.40.47.10 205 371 8.9E-29 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS05420 e4ce8960497f72dba3332eb0d286b6fd 373 Gene3D G3DSA:3.40.47.10 3 204 2.2E-49 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 LT40_RS17970 522726a6dbfd4ed16157f1e4aa509d40 398 Pfam PF07804 HipA-like C-terminal domain 229 367 9.7E-28 T 23-04-2016 IPR012893 HipA-like, C-terminal LT40_RS17970 522726a6dbfd4ed16157f1e4aa509d40 398 Pfam PF13657 HipA N-terminal domain 5 99 1.1E-13 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 LT40_RS17970 522726a6dbfd4ed16157f1e4aa509d40 398 PANTHER PTHR37419:SF1 146 319 7.5E-14 T 23-04-2016 LT40_RS17970 522726a6dbfd4ed16157f1e4aa509d40 398 PANTHER PTHR37419 146 319 7.5E-14 T 23-04-2016 LT40_RS17970 522726a6dbfd4ed16157f1e4aa509d40 398 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 15 101 5.4E-8 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 LT40_RS17970 522726a6dbfd4ed16157f1e4aa509d40 398 Pfam PF07805 HipA-like N-terminal domain 145 222 2.6E-15 T 23-04-2016 IPR012894 HipA, N-terminal subdomain 2 LT40_RS18915 cb5e647202143b2355618d95ff072697 427 PANTHER PTHR11986 1 427 4.4E-228 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS18915 cb5e647202143b2355618d95ff072697 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.564 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 LT40_RS18915 cb5e647202143b2355618d95ff072697 427 Gene3D G3DSA:3.90.1150.10 319 425 3.2E-38 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS18915 cb5e647202143b2355618d95ff072697 427 Gene3D G3DSA:3.90.1150.10 2 69 3.2E-38 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS18915 cb5e647202143b2355618d95ff072697 427 PANTHER PTHR11986:SF5 1 427 4.4E-228 T 23-04-2016 LT40_RS18915 cb5e647202143b2355618d95ff072697 427 Gene3D G3DSA:3.40.640.10 70 316 2.1E-85 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS18915 cb5e647202143b2355618d95ff072697 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS18915 cb5e647202143b2355618d95ff072697 427 Pfam PF00202 Aminotransferase class-III 33 395 1.4E-76 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS18915 cb5e647202143b2355618d95ff072697 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 424 1.0E-191 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 LT40_RS18915 cb5e647202143b2355618d95ff072697 427 SUPERFAMILY SSF53383 2 424 4.13E-134 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS05440 bbcacdbcd7a453fc65e6906af8b130e5 187 PANTHER PTHR11071 23 187 9.5E-72 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 LT40_RS05440 bbcacdbcd7a453fc65e6906af8b130e5 187 Gene3D G3DSA:2.40.100.10 24 185 9.6E-56 T 23-04-2016 IPR029000 Cyclophilin-like domain LT40_RS05440 bbcacdbcd7a453fc65e6906af8b130e5 187 SUPERFAMILY SSF50891 24 185 2.48E-58 T 23-04-2016 IPR029000 Cyclophilin-like domain LT40_RS05440 bbcacdbcd7a453fc65e6906af8b130e5 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 156 1.8E-9 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LT40_RS05440 bbcacdbcd7a453fc65e6906af8b130e5 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 79 1.8E-9 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LT40_RS05440 bbcacdbcd7a453fc65e6906af8b130e5 187 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 56 1.8E-9 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LT40_RS05440 bbcacdbcd7a453fc65e6906af8b130e5 187 PANTHER PTHR11071:SF265 23 187 9.5E-72 T 23-04-2016 LT40_RS05440 bbcacdbcd7a453fc65e6906af8b130e5 187 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 28 184 3.0E-47 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 391 4.4E-24 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 Pfam PF00563 EAL domain 417 644 2.6E-58 T 23-04-2016 IPR001633 EAL domain LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 SUPERFAMILY SSF141868 416 647 9.15E-53 T 23-04-2016 IPR001633 EAL domain LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 SMART SM00052 409 649 3.0E-23 T 23-04-2016 IPR001633 EAL domain LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 PANTHER PTHR33121:SF10 412 646 4.6E-39 T 23-04-2016 LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 392 1.1E-15 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 Gene3D G3DSA:3.20.20.450 412 647 4.8E-51 T 23-04-2016 IPR001633 EAL domain LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 PANTHER PTHR33121 412 646 4.6E-39 T 23-04-2016 LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 Pfam PF16448 LapD/MoxY periplasmic domain 23 145 3.5E-39 T 23-04-2016 IPR032244 LapD/MoxY, periplasmic domain LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 SUPERFAMILY SSF55073 241 397 3.69E-21 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 Pfam PF00672 HAMP domain 152 219 2.4E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 SMART SM00267 225 398 1.6E-23 T 23-04-2016 IPR000160 GGDEF domain LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 SMART SM00304 171 223 1.9E-5 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS15500 ac43ab1177d9c29ce857b012a35cc571 650 Gene3D G3DSA:3.30.70.270 238 400 4.8E-26 T 23-04-2016 LT40_RS09420 0f49983c86b50db9085f767d6a5605b4 276 Gene3D G3DSA:1.10.3720.10 4 264 3.4E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09420 0f49983c86b50db9085f767d6a5605b4 276 PANTHER PTHR32243 1 276 1.3E-129 T 23-04-2016 LT40_RS09420 0f49983c86b50db9085f767d6a5605b4 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 269 2.0E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09420 0f49983c86b50db9085f767d6a5605b4 276 PANTHER PTHR32243:SF11 1 276 1.3E-129 T 23-04-2016 LT40_RS09420 0f49983c86b50db9085f767d6a5605b4 276 SUPERFAMILY SSF161098 6 276 7.46E-62 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11670 8839d2dd4ca344cc4aa8c3a3cb639bbd 533 PANTHER PTHR19328 185 517 2.7E-64 T 23-04-2016 LT40_RS11670 8839d2dd4ca344cc4aa8c3a3cb639bbd 533 Gene3D G3DSA:2.120.10.30 175 531 1.5E-95 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS11670 8839d2dd4ca344cc4aa8c3a3cb639bbd 533 SUPERFAMILY SSF50952 175 528 1.44E-47 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 LT40_RS11670 8839d2dd4ca344cc4aa8c3a3cb639bbd 533 Pfam PF07995 Glucose / Sorbosone dehydrogenase 197 525 2.2E-108 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 LT40_RS13035 3131b03a2e95460bef58936fd4a68c51 623 Gene3D G3DSA:3.40.50.300 206 418 1.1E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13035 3131b03a2e95460bef58936fd4a68c51 623 SUPERFAMILY SSF52540 197 382 2.59E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13035 3131b03a2e95460bef58936fd4a68c51 623 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 264 606 9.4E-96 T 23-04-2016 IPR018647 Domain of unknown function DUF2075 LT40_RS09765 69f9d76b36a1d654e3d24484ccd2eacd 223 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 89 120 - T 23-04-2016 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 LT40_RS09765 69f9d76b36a1d654e3d24484ccd2eacd 223 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 216 1.2E-40 T 23-04-2016 LT40_RS09765 69f9d76b36a1d654e3d24484ccd2eacd 223 PANTHER PTHR23291:SF37 12 223 1.8E-103 T 23-04-2016 LT40_RS09765 69f9d76b36a1d654e3d24484ccd2eacd 223 PANTHER PTHR23291 12 223 1.8E-103 T 23-04-2016 IPR006214 Bax inhibitor 1-related LT40_RS18750 a8fac314de22fcbd45a1d36346f421b8 213 SUPERFAMILY SSF51735 5 198 3.76E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18750 a8fac314de22fcbd45a1d36346f421b8 213 PANTHER PTHR14097 1 213 3.6E-66 T 23-04-2016 LT40_RS18750 a8fac314de22fcbd45a1d36346f421b8 213 Gene3D G3DSA:3.40.50.720 3 211 8.8E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18750 a8fac314de22fcbd45a1d36346f421b8 213 PANTHER PTHR14097:SF7 1 213 3.6E-66 T 23-04-2016 LT40_RS16800 a9062c99fd4eeda70fae8b8c0204d7a2 229 Gene3D G3DSA:1.10.287.460 18 113 9.0E-16 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LT40_RS16800 a9062c99fd4eeda70fae8b8c0204d7a2 229 PANTHER PTHR10516 112 225 1.5E-23 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type LT40_RS16800 a9062c99fd4eeda70fae8b8c0204d7a2 229 SUPERFAMILY SSF54534 32 226 5.5E-39 T 23-04-2016 LT40_RS16800 a9062c99fd4eeda70fae8b8c0204d7a2 229 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 145 225 1.4E-17 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LT40_RS16800 a9062c99fd4eeda70fae8b8c0204d7a2 229 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 20 129 7.0E-12 T 23-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 LT40_RS16800 a9062c99fd4eeda70fae8b8c0204d7a2 229 PANTHER PTHR10516:SF320 112 225 1.5E-23 T 23-04-2016 LT40_RS16800 a9062c99fd4eeda70fae8b8c0204d7a2 229 Gene3D G3DSA:3.10.50.40 114 227 6.4E-32 T 23-04-2016 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 Pfam PF00672 HAMP domain 198 265 1.3E-13 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 178 5.5E-25 T 23-04-2016 IPR024478 4HB MCP domain LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 PANTHER PTHR32089 191 546 5.3E-112 T 23-04-2016 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 PANTHER PTHR32089 112 138 5.3E-112 T 23-04-2016 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 SMART SM00283 284 545 1.1E-78 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 Gene3D G3DSA:1.20.120.30 73 155 2.3E-6 T 23-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 SUPERFAMILY SSF58104 237 546 1.83E-74 T 23-04-2016 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 544 2.3E-47 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 Gene3D G3DSA:1.10.287.950 299 516 1.0E-55 T 23-04-2016 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 Gene3D G3DSA:3.40.50.10490 156 273 3.6E-4 T 23-04-2016 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 SMART SM00304 217 269 6.5E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 SUPERFAMILY SSF47170 78 165 3.01E-6 T 23-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 6.3E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 6.3E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS07680 961a363418afe1aef2156026f705a7ed 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 409 6.3E-21 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 LT40_RS10310 f8630cb94ed305e41d891cb7a0448383 374 Pfam PF00924 Mechanosensitive ion channel 146 337 1.8E-26 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LT40_RS10310 f8630cb94ed305e41d891cb7a0448383 374 SUPERFAMILY SSF50182 188 253 2.75E-13 T 23-04-2016 IPR010920 LSM domain LT40_RS10310 f8630cb94ed305e41d891cb7a0448383 374 PANTHER PTHR30566 30 354 9.8E-87 T 23-04-2016 LT40_RS10310 f8630cb94ed305e41d891cb7a0448383 374 PANTHER PTHR30566:SF10 30 354 9.8E-87 T 23-04-2016 LT40_RS10310 f8630cb94ed305e41d891cb7a0448383 374 Gene3D G3DSA:2.30.30.60 203 252 8.0E-7 T 23-04-2016 LT40_RS12315 04e021831c54c340bd9719eab6d89214 331 TIGRFAM TIGR02961 allantoicase: allantoicase 10 327 9.6E-140 T 23-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 LT40_RS12315 04e021831c54c340bd9719eab6d89214 331 SUPERFAMILY SSF49785 174 329 1.19E-55 T 23-04-2016 IPR008979 Galactose-binding domain-like LT40_RS12315 04e021831c54c340bd9719eab6d89214 331 SUPERFAMILY SSF49785 6 167 8.22E-58 T 23-04-2016 IPR008979 Galactose-binding domain-like LT40_RS12315 04e021831c54c340bd9719eab6d89214 331 PANTHER PTHR12045 8 330 2.4E-142 T 23-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 LT40_RS12315 04e021831c54c340bd9719eab6d89214 331 PIRSF PIRSF016516 1 331 3.5E-150 T 23-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 LT40_RS12315 04e021831c54c340bd9719eab6d89214 331 Gene3D G3DSA:2.60.120.260 169 329 4.5E-57 T 23-04-2016 IPR008979 Galactose-binding domain-like LT40_RS12315 04e021831c54c340bd9719eab6d89214 331 Gene3D G3DSA:2.60.120.260 5 166 9.1E-57 T 23-04-2016 IPR008979 Galactose-binding domain-like LT40_RS12315 04e021831c54c340bd9719eab6d89214 331 Pfam PF03561 Allantoicase repeat 187 327 4.7E-48 T 23-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 LT40_RS12315 04e021831c54c340bd9719eab6d89214 331 Pfam PF03561 Allantoicase repeat 20 164 1.2E-42 T 23-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 LT40_RS12315 04e021831c54c340bd9719eab6d89214 331 Hamap MF_00813 Probable allantoicase [alc]. 1 330 57.688 T 23-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 LT40_RS00335 dfac3f367c370897dff97b830c36e26a 121 Pfam PF11127 Protein of unknown function (DUF2892) 19 73 9.1E-7 T 23-04-2016 IPR021309 Protein of unknown function DUF2892 LT40_RS14900 fab4c5fd5a40f1d1154165a8211b1ae7 742 PANTHER PTHR30441 1 742 9.3E-183 T 23-04-2016 LT40_RS14900 fab4c5fd5a40f1d1154165a8211b1ae7 742 PANTHER PTHR30441:SF4 1 742 9.3E-183 T 23-04-2016 LT40_RS14900 fab4c5fd5a40f1d1154165a8211b1ae7 742 Pfam PF05170 AsmA family 1 624 1.2E-118 T 23-04-2016 IPR007844 AsmA LT40_RS12895 4cc02ad407ba638320855291331c1eae 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.808 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 LT40_RS12895 4cc02ad407ba638320855291331c1eae 152 Pfam PF02576 Putative ribosome maturation factor RimP 11 147 1.5E-48 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 LT40_RS12895 4cc02ad407ba638320855291331c1eae 152 Gene3D G3DSA:2.30.30.180 89 147 2.6E-12 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal LT40_RS12895 4cc02ad407ba638320855291331c1eae 152 PANTHER PTHR33867 1 152 6.0E-53 T 23-04-2016 LT40_RS12895 4cc02ad407ba638320855291331c1eae 152 SUPERFAMILY SSF75420 3 83 1.31E-24 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal LT40_RS12895 4cc02ad407ba638320855291331c1eae 152 Gene3D G3DSA:3.30.300.70 3 80 3.0E-31 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal LT40_RS12895 4cc02ad407ba638320855291331c1eae 152 PANTHER PTHR33867:SF1 1 152 6.0E-53 T 23-04-2016 LT40_RS12895 4cc02ad407ba638320855291331c1eae 152 SUPERFAMILY SSF74942 84 151 5.75E-18 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal LT40_RS10455 849884017175b3ff6e234407fd925309 427 SUPERFAMILY SSF55031 202 315 1.33E-13 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS10455 849884017175b3ff6e234407fd925309 427 SUPERFAMILY SSF53187 331 416 5.74E-46 T 23-04-2016 LT40_RS10455 849884017175b3ff6e234407fd925309 427 SUPERFAMILY SSF53187 8 201 5.74E-46 T 23-04-2016 LT40_RS10455 849884017175b3ff6e234407fd925309 427 Pfam PF01546 Peptidase family M20/M25/M40 96 415 2.1E-25 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LT40_RS10455 849884017175b3ff6e234407fd925309 427 Gene3D G3DSA:3.40.630.10 17 210 8.6E-47 T 23-04-2016 LT40_RS10455 849884017175b3ff6e234407fd925309 427 Gene3D G3DSA:3.40.630.10 358 415 8.6E-47 T 23-04-2016 LT40_RS10455 849884017175b3ff6e234407fd925309 427 Pfam PF07687 Peptidase dimerisation domain 201 312 1.4E-14 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS10455 849884017175b3ff6e234407fd925309 427 PANTHER PTHR11014 8 417 4.5E-43 T 23-04-2016 LT40_RS10455 849884017175b3ff6e234407fd925309 427 Gene3D G3DSA:3.30.70.360 211 315 1.6E-17 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS11920 5af25f1fdae7c1dc44611ba57c8ceaf6 384 PANTHER PTHR11751 4 380 5.8E-116 T 23-04-2016 LT40_RS11920 5af25f1fdae7c1dc44611ba57c8ceaf6 384 Pfam PF00155 Aminotransferase class I and II 33 375 9.8E-38 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS11920 5af25f1fdae7c1dc44611ba57c8ceaf6 384 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 379 6.2E-131 T 23-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 LT40_RS11920 5af25f1fdae7c1dc44611ba57c8ceaf6 384 SUPERFAMILY SSF53383 4 379 1.32E-89 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS11920 5af25f1fdae7c1dc44611ba57c8ceaf6 384 Gene3D G3DSA:3.40.640.10 39 246 2.2E-55 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS11920 5af25f1fdae7c1dc44611ba57c8ceaf6 384 Gene3D G3DSA:3.90.1150.10 247 380 9.3E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS11920 5af25f1fdae7c1dc44611ba57c8ceaf6 384 PANTHER PTHR11751:SF21 4 380 5.8E-116 T 23-04-2016 LT40_RS01070 b34d1fd15cbedef6e413b88e500302df 232 PANTHER PTHR30450:SF4 1 232 1.8E-150 T 23-04-2016 LT40_RS01070 b34d1fd15cbedef6e413b88e500302df 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 223 1.9E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS01070 b34d1fd15cbedef6e413b88e500302df 232 PANTHER PTHR30450 1 232 1.8E-150 T 23-04-2016 LT40_RS01070 b34d1fd15cbedef6e413b88e500302df 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 117 6.4E-22 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS01070 b34d1fd15cbedef6e413b88e500302df 232 SUPERFAMILY SSF161098 13 215 1.96E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS01070 b34d1fd15cbedef6e413b88e500302df 232 Gene3D G3DSA:1.10.3720.10 10 223 7.5E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS06655 4214b1ac35435ff4d1b4aae4df2e6119 357 Pfam PF01594 Domain of unknown function DUF20 10 339 1.3E-57 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like LT40_RS06655 4214b1ac35435ff4d1b4aae4df2e6119 357 PANTHER PTHR21716 3 354 5.6E-67 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like LT40_RS02230 4bd90e28e07468972adb5231123e4e87 500 PANTHER PTHR30026 81 498 2.0E-62 T 23-04-2016 LT40_RS02230 4bd90e28e07468972adb5231123e4e87 500 PANTHER PTHR30026:SF3 81 498 2.0E-62 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LT40_RS02230 4bd90e28e07468972adb5231123e4e87 500 Gene3D G3DSA:1.20.1600.10 89 481 1.7E-48 T 23-04-2016 LT40_RS02230 4bd90e28e07468972adb5231123e4e87 500 SUPERFAMILY SSF56954 13 35 6.02E-62 T 23-04-2016 LT40_RS02230 4bd90e28e07468972adb5231123e4e87 500 SUPERFAMILY SSF56954 83 482 6.02E-62 T 23-04-2016 LT40_RS02230 4bd90e28e07468972adb5231123e4e87 500 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 89 490 1.8E-78 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LT40_RS02230 4bd90e28e07468972adb5231123e4e87 500 Pfam PF02321 Outer membrane efflux protein 97 273 5.1E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS02230 4bd90e28e07468972adb5231123e4e87 500 Pfam PF02321 Outer membrane efflux protein 303 479 2.0E-13 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS01030 d7cead42f5f04695468cbccb40689d6c 457 PIRSF PIRSF006060 1 454 1.5E-70 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS01030 d7cead42f5f04695468cbccb40689d6c 457 PANTHER PTHR11785 3 452 8.6E-296 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS01030 d7cead42f5f04695468cbccb40689d6c 457 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LT40_RS01030 d7cead42f5f04695468cbccb40689d6c 457 PANTHER PTHR11785:SF26 3 452 8.6E-296 T 23-04-2016 LT40_RS01030 d7cead42f5f04695468cbccb40689d6c 457 Pfam PF00324 Amino acid permease 15 449 3.6E-113 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LT40_RS06005 f85399e8e352a8d15faa67b961fe90ae 319 Gene3D G3DSA:1.10.8.300 201 315 4.3E-41 T 23-04-2016 LT40_RS06005 f85399e8e352a8d15faa67b961fe90ae 319 PIRSF PIRSF002849 1 319 1.0E-125 T 23-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted LT40_RS06005 f85399e8e352a8d15faa67b961fe90ae 319 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 167 1.5E-63 T 23-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 LT40_RS06005 f85399e8e352a8d15faa67b961fe90ae 319 PANTHER PTHR11603:SF148 1 318 3.4E-149 T 23-04-2016 LT40_RS06005 f85399e8e352a8d15faa67b961fe90ae 319 SUPERFAMILY SSF52540 4 291 1.39E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06005 f85399e8e352a8d15faa67b961fe90ae 319 PANTHER PTHR11603 1 318 3.4E-149 T 23-04-2016 LT40_RS06005 f85399e8e352a8d15faa67b961fe90ae 319 Gene3D G3DSA:3.40.50.300 19 183 1.6E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14895 63be5005f589e53328529404f364d312 552 Gene3D G3DSA:1.20.1250.20 37 245 1.9E-15 T 23-04-2016 LT40_RS14895 63be5005f589e53328529404f364d312 552 Gene3D G3DSA:1.20.1250.20 273 483 1.7E-12 T 23-04-2016 LT40_RS14895 63be5005f589e53328529404f364d312 552 Pfam PF07690 Major Facilitator Superfamily 40 439 6.2E-37 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS14895 63be5005f589e53328529404f364d312 552 SUPERFAMILY SSF103473 26 483 7.85E-42 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS14895 63be5005f589e53328529404f364d312 552 PANTHER PTHR11360 332 500 8.0E-137 T 23-04-2016 LT40_RS14895 63be5005f589e53328529404f364d312 552 PANTHER PTHR11360 92 311 8.0E-137 T 23-04-2016 LT40_RS14895 63be5005f589e53328529404f364d312 552 PANTHER PTHR11360 25 68 8.0E-137 T 23-04-2016 LT40_RS14895 63be5005f589e53328529404f364d312 552 PANTHER PTHR11360:SF135 332 500 8.0E-137 T 23-04-2016 LT40_RS14895 63be5005f589e53328529404f364d312 552 PANTHER PTHR11360:SF135 92 311 8.0E-137 T 23-04-2016 LT40_RS14895 63be5005f589e53328529404f364d312 552 PANTHER PTHR11360:SF135 25 68 8.0E-137 T 23-04-2016 LT40_RS11320 165615d12100c0cbeec738e741f074f5 373 Gene3D G3DSA:2.30.30.280 218 285 1.6E-30 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 LT40_RS11320 165615d12100c0cbeec738e741f074f5 373 PANTHER PTHR11933 11 365 1.6E-203 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 LT40_RS11320 165615d12100c0cbeec738e741f074f5 373 Gene3D G3DSA:3.40.50.620 10 217 2.7E-97 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS11320 165615d12100c0cbeec738e741f074f5 373 Pfam PF03054 tRNA methyl transferase 12 364 2.7E-135 T 23-04-2016 LT40_RS11320 165615d12100c0cbeec738e741f074f5 373 SUPERFAMILY SSF52402 11 249 1.08E-56 T 23-04-2016 LT40_RS11320 165615d12100c0cbeec738e741f074f5 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 12 364 6.0E-140 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 LT40_RS11320 165615d12100c0cbeec738e741f074f5 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 12 365 39.929 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 LT40_RS11320 165615d12100c0cbeec738e741f074f5 373 PANTHER PTHR11933:SF10 11 365 1.6E-203 T 23-04-2016 LT40_RS11320 165615d12100c0cbeec738e741f074f5 373 Gene3D G3DSA:2.40.30.10 287 368 1.1E-29 T 23-04-2016 LT40_RS02855 e8815fbcf15b5e6317563158bf0b16e2 559 PANTHER PTHR22773:SF49 1 362 9.3E-106 T 23-04-2016 LT40_RS02855 e8815fbcf15b5e6317563158bf0b16e2 559 PANTHER PTHR22773:SF49 386 546 9.3E-106 T 23-04-2016 LT40_RS02855 e8815fbcf15b5e6317563158bf0b16e2 559 Pfam PF00361 Proton-conducting membrane transporter 134 442 1.6E-28 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 LT40_RS02855 e8815fbcf15b5e6317563158bf0b16e2 559 PANTHER PTHR22773 1 362 9.3E-106 T 23-04-2016 LT40_RS02855 e8815fbcf15b5e6317563158bf0b16e2 559 PANTHER PTHR22773 386 546 9.3E-106 T 23-04-2016 LT40_RS00340 3b20dff4ac8527d967533e1ddb9ee633 156 Pfam PF00588 SpoU rRNA Methylase family 9 140 1.1E-16 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LT40_RS00340 3b20dff4ac8527d967533e1ddb9ee633 156 SUPERFAMILY SSF75217 7 143 1.64E-26 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases LT40_RS00340 3b20dff4ac8527d967533e1ddb9ee633 156 Gene3D G3DSA:3.40.1280.10 9 143 4.5E-17 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 Pfam PF00571 CBS domain 277 323 0.0017 T 23-04-2016 IPR000644 CBS domain LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 407 499 1.4E-14 T 23-04-2016 IPR000160 GGDEF domain LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 SMART SM00267 390 574 4.2E-6 T 23-04-2016 IPR000160 GGDEF domain LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 SMART SM00052 2 246 1.6E-39 T 23-04-2016 IPR001633 EAL domain LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 Gene3D G3DSA:3.30.70.270 405 582 7.2E-22 T 23-04-2016 LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 PANTHER PTHR33121 10 274 5.9E-52 T 23-04-2016 LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 Gene3D G3DSA:3.20.20.450 8 241 1.3E-60 T 23-04-2016 IPR001633 EAL domain LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 PANTHER PTHR33121:SF10 10 274 5.9E-52 T 23-04-2016 LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 Gene3D G3DSA:3.10.580.10 277 396 4.4E-9 T 23-04-2016 LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 SUPERFAMILY SSF54631 276 394 7.44E-9 T 23-04-2016 LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 SUPERFAMILY SSF141868 8 241 3.53E-67 T 23-04-2016 IPR001633 EAL domain LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 SUPERFAMILY SSF55073 407 579 8.63E-22 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 Pfam PF00990 Diguanylate cyclase, GGDEF domain 406 490 5.0E-13 T 23-04-2016 IPR000160 GGDEF domain LT40_RS05715 6162d5b0458095a66df2a290b1ca446d 587 Pfam PF00563 EAL domain 9 239 6.3E-54 T 23-04-2016 IPR001633 EAL domain LT40_RS03710 82d9cc37da2a6a7ffb2e74400f6ef197 162 PIRSF PIRSF018472 1 162 1.9E-51 T 23-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type LT40_RS03710 82d9cc37da2a6a7ffb2e74400f6ef197 162 Pfam PF04093 rod shape-determining protein MreD 5 153 1.3E-34 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 LT40_RS03710 82d9cc37da2a6a7ffb2e74400f6ef197 162 PANTHER PTHR37484 1 162 1.0E-57 T 23-04-2016 LT40_RS03710 82d9cc37da2a6a7ffb2e74400f6ef197 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 153 1.4E-35 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 PANTHER PTHR24322 165 196 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 PANTHER PTHR24322 12 149 1.4E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 257 9.4E-63 T 23-04-2016 LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 Gene3D G3DSA:3.40.50.720 3 258 4.2E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.0E-39 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 SUPERFAMILY SSF51735 1 259 5.17E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS10860 d3d852f317ebd31bdd44886b99ccd319 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.1E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS18925 a834e11c7402d44efcc50ecdbd1e695f 265 Pfam PF08543 Phosphomethylpyrimidine kinase 17 253 1.9E-70 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 LT40_RS18925 a834e11c7402d44efcc50ecdbd1e695f 265 SUPERFAMILY SSF53613 6 255 2.13E-62 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS18925 a834e11c7402d44efcc50ecdbd1e695f 265 PANTHER PTHR20858 1 262 4.7E-70 T 23-04-2016 LT40_RS18925 a834e11c7402d44efcc50ecdbd1e695f 265 Gene3D G3DSA:3.40.1190.20 8 256 1.1E-73 T 23-04-2016 IPR029056 Ribokinase-like LT40_RS01045 d2088f4d3aacb8da17b10aaea9039bed 877 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 513 593 2.3E-25 T 23-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 LT40_RS01045 d2088f4d3aacb8da17b10aaea9039bed 877 PANTHER PTHR11219:SF45 8 593 2.4E-135 T 23-04-2016 LT40_RS01045 d2088f4d3aacb8da17b10aaea9039bed 877 PANTHER PTHR11219 8 593 2.4E-135 T 23-04-2016 LT40_RS08310 306a5331c28ad90eda873c7a55773314 439 PANTHER PTHR23024 48 135 8.7E-33 T 23-04-2016 LT40_RS08310 306a5331c28ad90eda873c7a55773314 439 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 6 346 6.8E-110 T 23-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase LT40_RS08310 306a5331c28ad90eda873c7a55773314 439 SUPERFAMILY SSF51905 273 348 8.94E-5 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08310 306a5331c28ad90eda873c7a55773314 439 Gene3D G3DSA:3.50.50.60 199 236 4.0E-4 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08310 306a5331c28ad90eda873c7a55773314 439 Gene3D G3DSA:3.50.50.60 286 343 4.0E-4 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08310 306a5331c28ad90eda873c7a55773314 439 SUPERFAMILY SSF51905 6 274 9.93E-16 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08310 306a5331c28ad90eda873c7a55773314 439 Gene3D G3DSA:3.50.50.60 75 198 6.4E-10 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08310 306a5331c28ad90eda873c7a55773314 439 SUPERFAMILY SSF51905 191 209 8.94E-5 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS08310 306a5331c28ad90eda873c7a55773314 439 PANTHER PTHR23024:SF215 48 135 8.7E-33 T 23-04-2016 LT40_RS08310 306a5331c28ad90eda873c7a55773314 439 TIGRFAM TIGR04439 histamin_N_OH: putative histamine N-monooxygenase 8 436 1.7E-235 T 23-04-2016 IPR031043 Putative histamine N-monooxygenase KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00020 LT40_RS17125 a59410e215a4af0f25ab21c2e07a680c 105 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 99 1.0E-37 T 23-04-2016 IPR012661 Conserved hypothetical protein CHP02448 LT40_RS17125 a59410e215a4af0f25ab21c2e07a680c 105 Pfam PF09498 Protein of unknown function (DUF2388) 29 98 2.6E-31 T 23-04-2016 IPR012661 Conserved hypothetical protein CHP02448 LT40_RS10625 71c546820f29f6cc3d88c0dd3d05b76a 234 Gene3D G3DSA:3.50.30.40 23 186 3.9E-44 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS10625 71c546820f29f6cc3d88c0dd3d05b76a 234 SUPERFAMILY SSF89562 23 190 2.75E-40 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS10625 71c546820f29f6cc3d88c0dd3d05b76a 234 PANTHER PTHR33254:SF5 10 208 1.5E-47 T 23-04-2016 LT40_RS10625 71c546820f29f6cc3d88c0dd3d05b76a 234 PANTHER PTHR33254 10 208 1.5E-47 T 23-04-2016 LT40_RS10625 71c546820f29f6cc3d88c0dd3d05b76a 234 Pfam PF03737 Demethylmenaquinone methyltransferase 27 179 1.1E-37 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS04110 f7c65f06a03af8465a028ba0e502a536 186 SUPERFAMILY SSF89028 7 182 4.32E-59 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 LT40_RS04110 f7c65f06a03af8465a028ba0e502a536 186 Gene3D G3DSA:1.20.1200.10 17 184 2.2E-58 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 LT40_RS04110 f7c65f06a03af8465a028ba0e502a536 186 Pfam PF01923 Cobalamin adenosyltransferase 8 169 4.8E-54 T 23-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 LT40_RS04110 f7c65f06a03af8465a028ba0e502a536 186 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 182 1.7E-51 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 LT40_RS04110 f7c65f06a03af8465a028ba0e502a536 186 PANTHER PTHR12213:SF0 3 182 6.6E-75 T 23-04-2016 LT40_RS04110 f7c65f06a03af8465a028ba0e502a536 186 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 14 182 2.0E-71 T 23-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 LT40_RS04110 f7c65f06a03af8465a028ba0e502a536 186 PANTHER PTHR12213 3 182 6.6E-75 T 23-04-2016 LT40_RS12075 1ac964ae836ab985fc43d87f74380077 87 Pfam PF14357 Domain of unknown function (DUF4404) 6 87 3.7E-23 T 23-04-2016 IPR025516 Protein of unknown function DUF4404 LT40_RS05960 a3504ec66877b02009c3797d6ad08086 147 Pfam PF03061 Thioesterase superfamily 51 126 7.5E-13 T 23-04-2016 IPR006683 Thioesterase domain LT40_RS05960 a3504ec66877b02009c3797d6ad08086 147 PANTHER PTHR12418 1 138 4.1E-49 T 23-04-2016 LT40_RS05960 a3504ec66877b02009c3797d6ad08086 147 PANTHER PTHR12418:SF33 1 138 4.1E-49 T 23-04-2016 LT40_RS05960 a3504ec66877b02009c3797d6ad08086 147 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 22 137 1.4E-33 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain LT40_RS05960 a3504ec66877b02009c3797d6ad08086 147 Gene3D G3DSA:3.10.129.10 2 139 6.3E-45 T 23-04-2016 IPR029069 HotDog domain LT40_RS05960 a3504ec66877b02009c3797d6ad08086 147 SUPERFAMILY SSF54637 18 144 2.14E-28 T 23-04-2016 IPR029069 HotDog domain LT40_RS12750 473792da15246873bfba31a661fbaac2 574 SUPERFAMILY SSF52518 4 177 1.26E-63 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12750 473792da15246873bfba31a661fbaac2 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 3.9E-254 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS12750 473792da15246873bfba31a661fbaac2 574 PANTHER PTHR18968:SF116 4 574 0.0 T 23-04-2016 LT40_RS12750 473792da15246873bfba31a661fbaac2 574 SUPERFAMILY SSF52467 189 361 4.42E-63 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12750 473792da15246873bfba31a661fbaac2 574 Gene3D G3DSA:3.40.50.1220 190 361 1.9E-63 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain LT40_RS12750 473792da15246873bfba31a661fbaac2 574 SUPERFAMILY SSF52518 370 571 4.24E-67 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12750 473792da15246873bfba31a661fbaac2 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 7.8E-49 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LT40_RS12750 473792da15246873bfba31a661fbaac2 574 Gene3D G3DSA:3.40.50.970 368 572 6.4E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12750 473792da15246873bfba31a661fbaac2 574 Gene3D G3DSA:3.40.50.970 4 174 4.2E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS12750 473792da15246873bfba31a661fbaac2 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 1.6E-59 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LT40_RS12750 473792da15246873bfba31a661fbaac2 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 3.5E-43 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LT40_RS12750 473792da15246873bfba31a661fbaac2 574 PANTHER PTHR18968 4 574 0.0 T 23-04-2016 LT40_RS18935 6c4c6a20987c441b33f0ef6825376ce0 489 Hamap MF_01932 AMP nucleosidase [amn]. 6 489 58.757 T 23-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LT40_RS18935 6c4c6a20987c441b33f0ef6825376ce0 489 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 14 489 5.5E-232 T 23-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LT40_RS18935 6c4c6a20987c441b33f0ef6825376ce0 489 Gene3D G3DSA:3.40.50.1580 178 471 1.1E-104 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LT40_RS18935 6c4c6a20987c441b33f0ef6825376ce0 489 SUPERFAMILY SSF53167 12 489 5.5E-143 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LT40_RS18935 6c4c6a20987c441b33f0ef6825376ce0 489 PANTHER PTHR21234 254 489 1.3E-119 T 23-04-2016 IPR018017 Nucleoside phosphorylase LT40_RS18935 6c4c6a20987c441b33f0ef6825376ce0 489 PANTHER PTHR21234 184 229 1.3E-119 T 23-04-2016 IPR018017 Nucleoside phosphorylase LT40_RS18935 6c4c6a20987c441b33f0ef6825376ce0 489 Pfam PF01048 Phosphorylase superfamily 275 435 2.9E-16 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LT40_RS18935 6c4c6a20987c441b33f0ef6825376ce0 489 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 15 169 1.3E-47 T 23-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LT40_RS18935 6c4c6a20987c441b33f0ef6825376ce0 489 Gene3D G3DSA:3.30.1730.10 9 174 5.5E-53 T 23-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 LT40_RS18935 6c4c6a20987c441b33f0ef6825376ce0 489 PANTHER PTHR21234:SF11 254 489 1.3E-119 T 23-04-2016 LT40_RS18935 6c4c6a20987c441b33f0ef6825376ce0 489 PANTHER PTHR21234:SF11 184 229 1.3E-119 T 23-04-2016 LT40_RS12740 1d497fdae9781bf2140827ead8a35b7a 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 1.3E-73 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS12740 1d497fdae9781bf2140827ead8a35b7a 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 1.7E-61 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS12740 1d497fdae9781bf2140827ead8a35b7a 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 44.419 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS12740 1d497fdae9781bf2140827ead8a35b7a 338 SUPERFAMILY SSF51735 1 182 3.2E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12740 1d497fdae9781bf2140827ead8a35b7a 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 5.4E-129 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS12740 1d497fdae9781bf2140827ead8a35b7a 338 Gene3D G3DSA:3.50.50.60 3 40 7.8E-6 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12740 1d497fdae9781bf2140827ead8a35b7a 338 Gene3D G3DSA:1.10.1040.10 41 325 2.4E-112 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS12740 1d497fdae9781bf2140827ead8a35b7a 338 SUPERFAMILY SSF48179 183 332 1.7E-67 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS12740 1d497fdae9781bf2140827ead8a35b7a 338 PANTHER PTHR21371 1 337 1.2E-190 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 LT40_RS08475 caafe4772df3fec4dca4e81f7e8f2ff1 508 SUPERFAMILY SSF103473 258 430 2.09E-31 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS08475 caafe4772df3fec4dca4e81f7e8f2ff1 508 SUPERFAMILY SSF103473 21 209 2.09E-31 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS08475 caafe4772df3fec4dca4e81f7e8f2ff1 508 SUPERFAMILY SSF103473 472 499 2.09E-31 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS08475 caafe4772df3fec4dca4e81f7e8f2ff1 508 Pfam PF07690 Major Facilitator Superfamily 25 420 6.3E-26 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS08475 caafe4772df3fec4dca4e81f7e8f2ff1 508 Gene3D G3DSA:1.20.1250.20 275 427 1.1E-6 T 23-04-2016 LT40_RS08475 caafe4772df3fec4dca4e81f7e8f2ff1 508 Gene3D G3DSA:1.20.1250.20 473 498 1.1E-6 T 23-04-2016 LT40_RS08475 caafe4772df3fec4dca4e81f7e8f2ff1 508 PANTHER PTHR23501 10 445 7.2E-89 T 23-04-2016 LT40_RS08475 caafe4772df3fec4dca4e81f7e8f2ff1 508 PANTHER PTHR23501 466 503 7.2E-89 T 23-04-2016 LT40_RS08475 caafe4772df3fec4dca4e81f7e8f2ff1 508 PANTHER PTHR23501:SF71 10 445 7.2E-89 T 23-04-2016 LT40_RS08475 caafe4772df3fec4dca4e81f7e8f2ff1 508 Gene3D G3DSA:1.20.1250.20 17 200 1.4E-15 T 23-04-2016 LT40_RS08475 caafe4772df3fec4dca4e81f7e8f2ff1 508 PANTHER PTHR23501:SF71 466 503 7.2E-89 T 23-04-2016 LT40_RS04800 f9138b9d723669a27bd0937829158248 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 19.533 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LT40_RS04800 f9138b9d723669a27bd0937829158248 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 1.0E-32 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LT40_RS04800 f9138b9d723669a27bd0937829158248 84 Pfam PF03776 Septum formation topological specificity factor MinE 15 82 3.9E-26 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LT40_RS04800 f9138b9d723669a27bd0937829158248 84 PANTHER PTHR33404 1 83 1.7E-28 T 23-04-2016 LT40_RS04800 f9138b9d723669a27bd0937829158248 84 Gene3D G3DSA:3.30.1070.10 34 83 1.5E-21 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LT40_RS04800 f9138b9d723669a27bd0937829158248 84 SUPERFAMILY SSF55229 33 83 6.15E-16 T 23-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 LT40_RS04145 35e7d371e5ac3d60f4e22ba0b9b4cd8c 335 Pfam PF04338 Protein of unknown function, DUF481 127 335 1.8E-48 T 23-04-2016 IPR007433 Protein of unknown function DUF481 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 1.7E-13 T 23-04-2016 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 1.7E-13 T 23-04-2016 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 1.7E-13 T 23-04-2016 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.7E-13 T 23-04-2016 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 3.7E-8 T 23-04-2016 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 3.7E-8 T 23-04-2016 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.7E-8 T 23-04-2016 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 338 3.8E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 Gene3D G3DSA:3.50.50.60 124 345 5.8E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 SUPERFAMILY SSF51905 1 55 1.21E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 SUPERFAMILY SSF51905 92 188 1.21E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 SUPERFAMILY SSF51905 232 360 1.21E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 Gene3D G3DSA:3.50.50.60 2 123 9.7E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 PANTHER PTHR22912 1 148 7.9E-25 T 23-04-2016 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 PANTHER PTHR22912 169 191 7.9E-25 T 23-04-2016 LT40_RS19565 f67539f8a40b831c9ceecf67c4806264 433 PANTHER PTHR22912 207 345 7.9E-25 T 23-04-2016 LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 178 206 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PANTHER PTHR24322 47 175 6.2E-64 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PANTHER PTHR24322 191 223 6.2E-64 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 191 210 3.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 3.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 3.6E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PANTHER PTHR24322:SF105 47 175 6.2E-64 T 23-04-2016 LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PANTHER PTHR24322:SF105 191 223 6.2E-64 T 23-04-2016 LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 Gene3D G3DSA:3.40.50.720 38 281 1.2E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 210 2.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 246 266 2.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 44 61 2.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 130 2.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 229 2.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 181 2.3E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 SUPERFAMILY SSF51735 42 281 2.49E-81 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12380 328c72ecf17670329686523b6fb584f4 285 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 52 281 5.9E-61 T 23-04-2016 LT40_RS00230 cab77759b9f24666a78e385041314efd 423 Pfam PF00155 Aminotransferase class I and II 68 414 1.2E-19 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS00230 cab77759b9f24666a78e385041314efd 423 PANTHER PTHR13693 11 416 6.6E-28 T 23-04-2016 LT40_RS00230 cab77759b9f24666a78e385041314efd 423 PANTHER PTHR13693:SF53 11 416 6.6E-28 T 23-04-2016 LT40_RS00230 cab77759b9f24666a78e385041314efd 423 Gene3D G3DSA:3.40.640.10 74 304 2.2E-35 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS00230 cab77759b9f24666a78e385041314efd 423 SUPERFAMILY SSF53383 30 415 5.3E-52 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS00230 cab77759b9f24666a78e385041314efd 423 Gene3D G3DSA:3.90.1150.10 305 414 2.5E-16 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS00060 de342fbe9b5429ee0940ca5cfe257b0d 373 Gene3D G3DSA:1.10.3290.10 33 289 5.0E-51 T 23-04-2016 IPR003812 Fido domain LT40_RS00060 de342fbe9b5429ee0940ca5cfe257b0d 373 Pfam PF02661 Fic/DOC family 151 218 1.3E-15 T 23-04-2016 IPR003812 Fido domain LT40_RS00060 de342fbe9b5429ee0940ca5cfe257b0d 373 SUPERFAMILY SSF140931 99 284 4.19E-32 T 23-04-2016 IPR003812 Fido domain LT40_RS00060 de342fbe9b5429ee0940ca5cfe257b0d 373 PANTHER PTHR13504 20 371 2.9E-198 T 23-04-2016 LT40_RS00060 de342fbe9b5429ee0940ca5cfe257b0d 373 PANTHER PTHR13504:SF35 20 371 2.9E-198 T 23-04-2016 LT40_RS00060 de342fbe9b5429ee0940ca5cfe257b0d 373 PIRSF PIRSF038925 8 365 3.1E-111 T 23-04-2016 IPR026287 Adenosine monophosphate-protein transferase LT40_RS00060 de342fbe9b5429ee0940ca5cfe257b0d 373 Pfam PF13784 Fic/DOC family N-terminal 32 113 2.0E-23 T 23-04-2016 IPR025758 Fic/DOC N-terminal LT40_RS19250 8811e93af7c1ac761dcc47224c89b81a 172 Pfam PF01799 [2Fe-2S] binding domain 88 160 2.8E-31 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS19250 8811e93af7c1ac761dcc47224c89b81a 172 SUPERFAMILY SSF54292 12 102 5.24E-27 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS19250 8811e93af7c1ac761dcc47224c89b81a 172 Gene3D G3DSA:3.10.20.30 16 89 4.4E-31 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS19250 8811e93af7c1ac761dcc47224c89b81a 172 Gene3D G3DSA:1.10.150.120 90 168 2.1E-33 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS19250 8811e93af7c1ac761dcc47224c89b81a 172 PANTHER PTHR11908 14 150 2.7E-39 T 23-04-2016 LT40_RS19250 8811e93af7c1ac761dcc47224c89b81a 172 SUPERFAMILY SSF47741 99 167 1.83E-29 T 23-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 LT40_RS19250 8811e93af7c1ac761dcc47224c89b81a 172 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 54 62 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 LT40_RS19250 8811e93af7c1ac761dcc47224c89b81a 172 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 22 75 4.4E-7 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS19250 8811e93af7c1ac761dcc47224c89b81a 172 PANTHER PTHR11908:SF66 14 150 2.7E-39 T 23-04-2016 LT40_RS16965 484dd4e056a35c2beea1f533a212f809 277 PANTHER PTHR30468 1 277 2.3E-93 T 23-04-2016 LT40_RS16965 484dd4e056a35c2beea1f533a212f809 277 SUPERFAMILY SSF51197 3 277 2.93E-93 T 23-04-2016 LT40_RS16965 484dd4e056a35c2beea1f533a212f809 277 Gene3D G3DSA:3.60.130.10 2 277 9.2E-97 T 23-04-2016 LT40_RS16965 484dd4e056a35c2beea1f533a212f809 277 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 5 270 2.5E-64 T 23-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 LT40_RS16965 484dd4e056a35c2beea1f533a212f809 277 PANTHER PTHR30468:SF2 1 277 2.3E-93 T 23-04-2016 LT40_RS03965 b0b2f952edbaf86d96eaf9855bca0bfd 347 Pfam PF00419 Fimbrial protein 187 346 5.2E-10 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LT40_RS03965 b0b2f952edbaf86d96eaf9855bca0bfd 347 PANTHER PTHR33420 183 347 6.7E-18 T 23-04-2016 LT40_RS03965 b0b2f952edbaf86d96eaf9855bca0bfd 347 PANTHER PTHR33420:SF1 183 347 6.7E-18 T 23-04-2016 LT40_RS03965 b0b2f952edbaf86d96eaf9855bca0bfd 347 SUPERFAMILY SSF49401 186 346 1.09E-19 T 23-04-2016 IPR008966 Adhesion domain LT40_RS03965 b0b2f952edbaf86d96eaf9855bca0bfd 347 Gene3D G3DSA:2.60.40.1090 185 346 5.7E-21 T 23-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 LT40_RS02710 736d42261495f36e5b8100d45bbe72cc 121 Gene3D G3DSA:3.40.50.2300 3 119 1.7E-28 T 23-04-2016 LT40_RS02710 736d42261495f36e5b8100d45bbe72cc 121 Pfam PF00072 Response regulator receiver domain 6 114 2.7E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02710 736d42261495f36e5b8100d45bbe72cc 121 SMART SM00448 4 114 5.6E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS02710 736d42261495f36e5b8100d45bbe72cc 121 PANTHER PTHR26402 4 116 6.2E-22 T 23-04-2016 LT40_RS02710 736d42261495f36e5b8100d45bbe72cc 121 SUPERFAMILY SSF52172 2 119 1.38E-25 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS16305 f4497ef2382933a0dff4c14a0f502082 480 PANTHER PTHR30330 1 466 1.2E-241 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LT40_RS16305 f4497ef2382933a0dff4c14a0f502082 480 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 84 99 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LT40_RS16305 f4497ef2382933a0dff4c14a0f502082 480 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 432 1.8E-143 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LT40_RS16305 f4497ef2382933a0dff4c14a0f502082 480 PRINTS PR00175 Sodium/alanine symporter signature 203 222 1.5E-50 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LT40_RS16305 f4497ef2382933a0dff4c14a0f502082 480 PRINTS PR00175 Sodium/alanine symporter signature 340 362 1.5E-50 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LT40_RS16305 f4497ef2382933a0dff4c14a0f502082 480 PRINTS PR00175 Sodium/alanine symporter signature 401 421 1.5E-50 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LT40_RS16305 f4497ef2382933a0dff4c14a0f502082 480 PRINTS PR00175 Sodium/alanine symporter signature 84 106 1.5E-50 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LT40_RS16305 f4497ef2382933a0dff4c14a0f502082 480 PRINTS PR00175 Sodium/alanine symporter signature 175 193 1.5E-50 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LT40_RS16305 f4497ef2382933a0dff4c14a0f502082 480 PRINTS PR00175 Sodium/alanine symporter signature 294 312 1.5E-50 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LT40_RS16305 f4497ef2382933a0dff4c14a0f502082 480 PANTHER PTHR30330:SF1 1 466 1.2E-241 T 23-04-2016 LT40_RS16305 f4497ef2382933a0dff4c14a0f502082 480 Pfam PF01235 Sodium:alanine symporter family 49 445 1.6E-151 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 LT40_RS09425 178eba6ade827a50f4cfa0a566445766 308 Gene3D G3DSA:1.10.3720.10 19 296 1.2E-48 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09425 178eba6ade827a50f4cfa0a566445766 308 SUPERFAMILY SSF161098 68 294 9.05E-48 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09425 178eba6ade827a50f4cfa0a566445766 308 PANTHER PTHR30193:SF28 18 308 1.5E-141 T 23-04-2016 LT40_RS09425 178eba6ade827a50f4cfa0a566445766 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 304 4.0E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS09425 178eba6ade827a50f4cfa0a566445766 308 PANTHER PTHR30193 18 308 1.5E-141 T 23-04-2016 LT40_RS05925 83d828c6b84e08382d493b27545d3600 135 SUPERFAMILY SSF82784 4 125 6.02E-28 T 23-04-2016 IPR003718 OsmC/Ohr family LT40_RS05925 83d828c6b84e08382d493b27545d3600 135 PANTHER PTHR39624 1 126 2.6E-23 T 23-04-2016 LT40_RS05925 83d828c6b84e08382d493b27545d3600 135 Pfam PF02566 OsmC-like protein 35 128 3.8E-17 T 23-04-2016 IPR003718 OsmC/Ohr family LT40_RS05925 83d828c6b84e08382d493b27545d3600 135 PANTHER PTHR39624:SF2 1 126 2.6E-23 T 23-04-2016 LT40_RS05925 83d828c6b84e08382d493b27545d3600 135 Gene3D G3DSA:3.30.300.20 3 130 9.0E-30 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta LT40_RS20490 f5fba6b5b06d4f28512606a93f2bfffb 425 SMART SM01154 35 413 4.0E-182 T 23-04-2016 IPR012548 Protein of unknown function DUF1704 LT40_RS20490 f5fba6b5b06d4f28512606a93f2bfffb 425 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 15 406 1.9E-135 T 23-04-2016 IPR012656 Conserved hypothetical protein CHP02421, QEGLA LT40_RS20490 f5fba6b5b06d4f28512606a93f2bfffb 425 Pfam PF08014 Domain of unknown function (DUF1704) 38 410 8.0E-131 T 23-04-2016 IPR012548 Protein of unknown function DUF1704 LT40_RS20490 f5fba6b5b06d4f28512606a93f2bfffb 425 PANTHER PTHR31817:SF4 207 340 2.0E-13 T 23-04-2016 LT40_RS20490 f5fba6b5b06d4f28512606a93f2bfffb 425 PANTHER PTHR31817 207 340 2.0E-13 T 23-04-2016 LT40_RS08615 86b9c39160feddeb4269ba2d688ddef5 79 Pfam PF01726 LexA DNA binding domain 8 66 1.6E-8 T 23-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 LT40_RS08615 86b9c39160feddeb4269ba2d688ddef5 79 Gene3D G3DSA:1.10.10.10 8 69 5.6E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS08615 86b9c39160feddeb4269ba2d688ddef5 79 SUPERFAMILY SSF46785 9 72 3.24E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07670 171be64e5e30291820545ea10297981d 340 PANTHER PTHR11732 4 339 2.7E-134 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS07670 171be64e5e30291820545ea10297981d 340 PANTHER PTHR11732:SF273 4 339 2.7E-134 T 23-04-2016 LT40_RS07670 171be64e5e30291820545ea10297981d 340 Pfam PF00248 Aldo/keto reductase family 18 314 9.8E-67 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS07670 171be64e5e30291820545ea10297981d 340 PRINTS PR00069 Aldo-keto reductase signature 42 66 1.6E-6 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS07670 171be64e5e30291820545ea10297981d 340 PRINTS PR00069 Aldo-keto reductase signature 139 156 1.6E-6 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS07670 171be64e5e30291820545ea10297981d 340 PRINTS PR00069 Aldo-keto reductase signature 108 126 1.6E-6 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS07670 171be64e5e30291820545ea10297981d 340 Gene3D G3DSA:3.20.20.100 13 318 1.3E-93 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS07670 171be64e5e30291820545ea10297981d 340 SUPERFAMILY SSF51430 5 316 9.82E-94 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS06810 0afd51f215e6da237b40104ee88a53a0 249 PANTHER PTHR24220 17 242 9.4E-53 T 23-04-2016 LT40_RS06810 0afd51f215e6da237b40104ee88a53a0 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS06810 0afd51f215e6da237b40104ee88a53a0 249 SUPERFAMILY SSF52540 9 231 1.74E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06810 0afd51f215e6da237b40104ee88a53a0 249 Pfam PF00005 ABC transporter 31 171 1.2E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS06810 0afd51f215e6da237b40104ee88a53a0 249 Gene3D G3DSA:3.40.50.300 14 235 2.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06810 0afd51f215e6da237b40104ee88a53a0 249 PANTHER PTHR24220:SF218 17 242 9.4E-53 T 23-04-2016 LT40_RS06810 0afd51f215e6da237b40104ee88a53a0 249 SMART SM00382 40 221 3.7E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS19130 108ea4cf464b8b2138290358de972c8f 246 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 86 244 1.0E-24 T 23-04-2016 IPR005642 Lysine exporter LysO LT40_RS19130 108ea4cf464b8b2138290358de972c8f 246 PANTHER PTHR35804 12 246 7.8E-38 T 23-04-2016 LT40_RS19130 108ea4cf464b8b2138290358de972c8f 246 Pfam PF03956 Membrane protein of unknown function (DUF340) 79 244 5.3E-44 T 23-04-2016 IPR005642 Lysine exporter LysO LT40_RS19130 108ea4cf464b8b2138290358de972c8f 246 PANTHER PTHR35804:SF1 12 246 7.8E-38 T 23-04-2016 LT40_RS06985 19331dc6950616cf117866fda02ef10a 74 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 4 63 2.9E-16 T 23-04-2016 IPR018691 Protein of unknown function DUF2188 LT40_RS20310 bcbe820861b43b4f1cddbb2bf138bd84 199 Gene3D G3DSA:3.90.79.10 3 183 1.1E-37 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS20310 bcbe820861b43b4f1cddbb2bf138bd84 199 Pfam PF00293 NUDIX domain 26 134 2.8E-10 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LT40_RS20310 bcbe820861b43b4f1cddbb2bf138bd84 199 SUPERFAMILY SSF55811 10 175 2.57E-31 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS20310 bcbe820861b43b4f1cddbb2bf138bd84 199 PANTHER PTHR12992 1 183 1.6E-53 T 23-04-2016 LT40_RS06455 07872676f3bece9019a36120b638eec4 330 PANTHER PTHR23024 76 327 1.7E-46 T 23-04-2016 LT40_RS06455 07872676f3bece9019a36120b638eec4 330 Pfam PF07859 alpha/beta hydrolase fold 91 298 5.2E-41 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LT40_RS06455 07872676f3bece9019a36120b638eec4 330 SUPERFAMILY SSF53474 56 316 6.37E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS06455 07872676f3bece9019a36120b638eec4 330 Gene3D G3DSA:3.40.50.1820 47 320 2.1E-58 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS17790 6fbfc2ae01e03b2ef74ada95c59047a6 200 SUPERFAMILY SSF56112 22 165 4.29E-13 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS17790 6fbfc2ae01e03b2ef74ada95c59047a6 200 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 36 186 4.9E-7 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 LT40_RS17790 6fbfc2ae01e03b2ef74ada95c59047a6 200 Gene3D G3DSA:1.10.510.10 114 184 1.6E-7 T 23-04-2016 LT40_RS03375 6641a45742e4d5b81c4d7e5005f19fc0 517 PANTHER PTHR22953 218 400 7.0E-155 T 23-04-2016 LT40_RS03375 6641a45742e4d5b81c4d7e5005f19fc0 517 PANTHER PTHR22953 1 189 7.0E-155 T 23-04-2016 LT40_RS03375 6641a45742e4d5b81c4d7e5005f19fc0 517 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 41 128 9.4E-18 T 23-04-2016 IPR032093 Phospholipase D, N-terminal LT40_RS03375 6641a45742e4d5b81c4d7e5005f19fc0 517 PANTHER PTHR22953:SF40 218 400 7.0E-155 T 23-04-2016 LT40_RS03375 6641a45742e4d5b81c4d7e5005f19fc0 517 PANTHER PTHR22953:SF40 1 189 7.0E-155 T 23-04-2016 LT40_RS03375 6641a45742e4d5b81c4d7e5005f19fc0 517 Pfam PF09423 PhoD-like phosphatase 156 500 7.7E-82 T 23-04-2016 IPR018946 Alkaline phosphatase D-related LT40_RS03375 6641a45742e4d5b81c4d7e5005f19fc0 517 Gene3D G3DSA:3.60.21.10 134 516 6.9E-29 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS03375 6641a45742e4d5b81c4d7e5005f19fc0 517 SUPERFAMILY SSF56300 135 514 3.04E-39 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like LT40_RS17845 c8c5f4b8858494a14d566b0d28f10c29 97 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 9 89 1.8E-35 T 23-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 LT40_RS17845 c8c5f4b8858494a14d566b0d28f10c29 97 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 3 90 25.243 T 23-04-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 UniPathway: UPA00539 LT40_RS17845 c8c5f4b8858494a14d566b0d28f10c29 97 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 25 88 1.6E-14 T 23-04-2016 IPR008792 Coenzyme PQQ synthesis D UniPathway: UPA00539 LT40_RS15845 4a294393a79825f7171fa41915d861bc 218 SUPERFAMILY SSF56784 3 213 4.2E-53 T 23-04-2016 IPR023214 HAD-like domain LT40_RS15845 4a294393a79825f7171fa41915d861bc 218 Gene3D G3DSA:3.40.50.1000 76 212 4.3E-40 T 23-04-2016 IPR023214 HAD-like domain LT40_RS15845 4a294393a79825f7171fa41915d861bc 218 PANTHER PTHR18901 3 213 1.3E-81 T 23-04-2016 LT40_RS15845 4a294393a79825f7171fa41915d861bc 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 2.1E-30 T 23-04-2016 IPR023214 HAD-like domain LT40_RS15845 4a294393a79825f7171fa41915d861bc 218 Gene3D G3DSA:1.10.150.240 17 75 2.4E-25 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LT40_RS15845 4a294393a79825f7171fa41915d861bc 218 PANTHER PTHR18901:SF23 3 213 1.3E-81 T 23-04-2016 LT40_RS07690 8a69cda7dfc2915c1f49c9d585a249c2 413 PRINTS PR00758 Arsenical pump membrane protein signature 389 413 4.9E-24 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS07690 8a69cda7dfc2915c1f49c9d585a249c2 413 PRINTS PR00758 Arsenical pump membrane protein signature 178 201 4.9E-24 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS07690 8a69cda7dfc2915c1f49c9d585a249c2 413 PRINTS PR00758 Arsenical pump membrane protein signature 105 129 4.9E-24 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS07690 8a69cda7dfc2915c1f49c9d585a249c2 413 PRINTS PR00758 Arsenical pump membrane protein signature 356 381 4.9E-24 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS07690 8a69cda7dfc2915c1f49c9d585a249c2 413 PRINTS PR00758 Arsenical pump membrane protein signature 274 298 4.9E-24 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS07690 8a69cda7dfc2915c1f49c9d585a249c2 413 PANTHER PTHR10283:SF21 7 413 1.5E-97 T 23-04-2016 LT40_RS07690 8a69cda7dfc2915c1f49c9d585a249c2 413 Pfam PF02040 Arsenical pump membrane protein 35 410 9.2E-30 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 LT40_RS07690 8a69cda7dfc2915c1f49c9d585a249c2 413 PANTHER PTHR10283 7 413 1.5E-97 T 23-04-2016 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 PANTHER PTHR11117 1 287 2.8E-193 T 23-04-2016 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 23-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 1.1E-143 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 Pfam PF00549 CoA-ligase 151 270 4.5E-22 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 SUPERFAMILY SSF51735 1 122 4.33E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 Pfam PF02629 CoA binding domain 6 99 4.7E-31 T 23-04-2016 IPR003781 CoA-binding GO:0048037 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 Gene3D G3DSA:3.40.50.261 120 287 9.7E-78 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 Gene3D G3DSA:3.40.50.720 2 119 4.2E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 8.2E-39 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 8.2E-39 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 8.2E-39 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 8.2E-39 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 SUPERFAMILY SSF52210 123 287 8.63E-58 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 PIRSF PIRSF001553 1 290 3.6E-132 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 LT40_RS12560 5097e6c7262798ce51c3e10772d5ce92 293 SMART SM00881 4 100 9.5E-37 T 23-04-2016 IPR003781 CoA-binding GO:0048037 LT40_RS17275 73b38f08c4bdc0aa96afa5a852028041 360 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 326 9.5E-98 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17275 73b38f08c4bdc0aa96afa5a852028041 360 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 339 8.4E-155 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LT40_RS17275 73b38f08c4bdc0aa96afa5a852028041 360 Gene3D G3DSA:3.40.50.720 1 191 6.7E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17275 73b38f08c4bdc0aa96afa5a852028041 360 SUPERFAMILY SSF51735 1 345 8.92E-95 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS17275 73b38f08c4bdc0aa96afa5a852028041 360 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS17275 73b38f08c4bdc0aa96afa5a852028041 360 PANTHER PTHR10366:SF41 2 353 1.6E-177 T 23-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LT40_RS17275 73b38f08c4bdc0aa96afa5a852028041 360 PANTHER PTHR10366 2 353 1.6E-177 T 23-04-2016 LT40_RS17275 73b38f08c4bdc0aa96afa5a852028041 360 Gene3D G3DSA:3.90.25.10 192 341 6.6E-55 T 23-04-2016 LT40_RS11765 a8f325afbc88ee57f791c18d51f8818b 142 PANTHER PTHR33516:SF1 16 142 4.2E-41 T 23-04-2016 LT40_RS11765 a8f325afbc88ee57f791c18d51f8818b 142 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 4.9E-6 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LT40_RS11765 a8f325afbc88ee57f791c18d51f8818b 142 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 4.9E-6 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LT40_RS11765 a8f325afbc88ee57f791c18d51f8818b 142 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 4.9E-6 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LT40_RS11765 a8f325afbc88ee57f791c18d51f8818b 142 SUPERFAMILY SSF51306 16 137 1.24E-32 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C LT40_RS11765 a8f325afbc88ee57f791c18d51f8818b 142 Gene3D G3DSA:2.10.109.10 25 139 2.2E-40 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain LT40_RS11765 a8f325afbc88ee57f791c18d51f8818b 142 Pfam PF00717 Peptidase S24-like 55 120 6.8E-14 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B LT40_RS11765 a8f325afbc88ee57f791c18d51f8818b 142 PANTHER PTHR33516 16 142 4.2E-41 T 23-04-2016 LT40_RS00315 9853cd9bca813d212b671b1f38058e3f 97 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 4 80 8.0E-32 T 23-04-2016 IPR027354 YcgL domain LT40_RS00315 9853cd9bca813d212b671b1f38058e3f 97 PANTHER PTHR38109 4 97 2.1E-33 T 23-04-2016 LT40_RS00315 9853cd9bca813d212b671b1f38058e3f 97 Hamap MF_01866 Protein YcgL [ycgL]. 3 90 24.481 T 23-04-2016 IPR027354 YcgL domain LT40_RS00315 9853cd9bca813d212b671b1f38058e3f 97 SUPERFAMILY SSF160191 2 95 8.11E-34 T 23-04-2016 LT40_RS00315 9853cd9bca813d212b671b1f38058e3f 97 Pfam PF05166 YcgL domain 5 77 1.2E-29 T 23-04-2016 IPR027354 YcgL domain LT40_RS11195 4792accce93c4934e37b5eb54098cf0c 295 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 8 292 2.4E-130 T 23-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 LT40_RS11195 4792accce93c4934e37b5eb54098cf0c 295 Gene3D G3DSA:3.20.20.60 6 288 8.6E-100 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS11195 4792accce93c4934e37b5eb54098cf0c 295 SUPERFAMILY SSF51621 4 290 1.17E-99 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS11195 4792accce93c4934e37b5eb54098cf0c 295 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 5 293 49.9 T 23-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 LT40_RS11195 4792accce93c4934e37b5eb54098cf0c 295 ProSitePatterns PS00161 Isocitrate lyase signature. 122 127 - T 23-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 LT40_RS11195 4792accce93c4934e37b5eb54098cf0c 295 Pfam PF13714 Phosphoenolpyruvate phosphomutase 11 255 3.4E-49 T 23-04-2016 LT40_RS11195 4792accce93c4934e37b5eb54098cf0c 295 PANTHER PTHR21631 5 295 6.2E-160 T 23-04-2016 LT40_RS11195 4792accce93c4934e37b5eb54098cf0c 295 PANTHER PTHR21631:SF4 5 295 6.2E-160 T 23-04-2016 LT40_RS13915 e49514353fb4c0d9a1a4a63fa7f81677 511 Pfam PF08668 HDOD domain 34 209 1.6E-9 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD LT40_RS13915 e49514353fb4c0d9a1a4a63fa7f81677 511 SUPERFAMILY SSF109604 17 252 1.04E-18 T 23-04-2016 LT40_RS13915 e49514353fb4c0d9a1a4a63fa7f81677 511 Gene3D G3DSA:1.10.3150.10 15 246 7.4E-13 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD LT40_RS20110 c3a818c241b4c4ff1827a6033986229e 136 Gene3D G3DSA:3.30.160.100 1 103 1.6E-9 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LT40_RS20110 c3a818c241b4c4ff1827a6033986229e 136 SUPERFAMILY SSF69754 1 95 9.81E-10 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LT40_RS20110 c3a818c241b4c4ff1827a6033986229e 136 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 9 101 2.7E-8 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LT40_RS00515 e6c7982df99f63cce9829926c6c312bd 92 PANTHER PTHR37485 5 91 5.2E-41 T 23-04-2016 LT40_RS00515 e6c7982df99f63cce9829926c6c312bd 92 PANTHER PTHR37485:SF1 5 91 5.2E-41 T 23-04-2016 LT40_RS00515 e6c7982df99f63cce9829926c6c312bd 92 Pfam PF04977 Septum formation initiator 14 90 2.2E-22 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 LT40_RS00515 e6c7982df99f63cce9829926c6c312bd 92 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 92 32.546 T 23-04-2016 IPR023081 Cell division protein FtsB LT40_RS08695 0045f5c8756f75a78dd11b6906eebe49 109 Pfam PF05106 Phage holin family (Lysis protein S) 3 105 1.5E-27 T 23-04-2016 IPR006481 Bacteriophage lambda, GpS, holin LT40_RS08695 0045f5c8756f75a78dd11b6906eebe49 109 TIGRFAM TIGR01594 holin_lambda: phage holin, lambda family 1 107 8.6E-28 T 23-04-2016 IPR006481 Bacteriophage lambda, GpS, holin LT40_RS10430 88ae671a767a2fe937b2bebae92eac49 408 SUPERFAMILY SSF55031 184 300 7.03E-6 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS10430 88ae671a767a2fe937b2bebae92eac49 408 Gene3D G3DSA:3.40.630.10 11 184 1.1E-50 T 23-04-2016 LT40_RS10430 88ae671a767a2fe937b2bebae92eac49 408 Gene3D G3DSA:3.40.630.10 311 403 1.1E-50 T 23-04-2016 LT40_RS10430 88ae671a767a2fe937b2bebae92eac49 408 Pfam PF01546 Peptidase family M20/M25/M40 79 398 4.8E-30 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LT40_RS10430 88ae671a767a2fe937b2bebae92eac49 408 SUPERFAMILY SSF53187 315 403 1.15E-52 T 23-04-2016 LT40_RS10430 88ae671a767a2fe937b2bebae92eac49 408 SUPERFAMILY SSF53187 13 183 1.15E-52 T 23-04-2016 LT40_RS10430 88ae671a767a2fe937b2bebae92eac49 408 Gene3D G3DSA:3.30.70.360 185 296 9.4E-7 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain LT40_RS10430 88ae671a767a2fe937b2bebae92eac49 408 PANTHER PTHR11014 16 406 3.7E-52 T 23-04-2016 LT40_RS16175 7898fc14c6f0e6d779f8c0d92c683a7c 472 PANTHER PTHR11271 25 469 4.5E-148 T 23-04-2016 LT40_RS16175 7898fc14c6f0e6d779f8c0d92c683a7c 472 Gene3D G3DSA:2.30.40.10 396 452 2.9E-4 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS16175 7898fc14c6f0e6d779f8c0d92c683a7c 472 PANTHER PTHR11271:SF4 25 469 4.5E-148 T 23-04-2016 IPR010252 Formiminoglutamate deiminase LT40_RS16175 7898fc14c6f0e6d779f8c0d92c683a7c 472 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 14 467 1.3E-175 T 23-04-2016 IPR010252 Formiminoglutamate deiminase LT40_RS16175 7898fc14c6f0e6d779f8c0d92c683a7c 472 Gene3D G3DSA:3.20.20.140 65 395 1.4E-75 T 23-04-2016 LT40_RS16175 7898fc14c6f0e6d779f8c0d92c683a7c 472 SUPERFAMILY SSF51556 62 389 4.25E-73 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS16175 7898fc14c6f0e6d779f8c0d92c683a7c 472 SUPERFAMILY SSF51338 366 450 1.18E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS16175 7898fc14c6f0e6d779f8c0d92c683a7c 472 Pfam PF01979 Amidohydrolase family 62 444 4.5E-31 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LT40_RS20795 2de457f1719946a8f3c37dbc6d25df25 293 Gene3D G3DSA:3.40.50.1820 76 290 4.5E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS20795 2de457f1719946a8f3c37dbc6d25df25 293 SUPERFAMILY SSF53474 23 288 1.86E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS20795 2de457f1719946a8f3c37dbc6d25df25 293 Pfam PF12146 Serine aminopeptidase, S33 91 221 8.3E-18 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 LT40_RS20795 2de457f1719946a8f3c37dbc6d25df25 293 PANTHER PTHR12277 77 291 4.2E-47 T 23-04-2016 LT40_RS20795 2de457f1719946a8f3c37dbc6d25df25 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 131 5.7E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS20795 2de457f1719946a8f3c37dbc6d25df25 293 PRINTS PR00111 Alpha/beta hydrolase fold signature 163 176 5.7E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS00435 0ffdb3b38a97cd04f04a3205baf60094 271 PANTHER PTHR13773 1 263 2.3E-65 T 23-04-2016 LT40_RS00435 0ffdb3b38a97cd04f04a3205baf60094 271 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 224 250 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 LT40_RS00435 0ffdb3b38a97cd04f04a3205baf60094 271 Pfam PF01148 Cytidylyltransferase family 3 264 1.1E-63 T 23-04-2016 LT40_RS00435 0ffdb3b38a97cd04f04a3205baf60094 271 PANTHER PTHR13773:SF0 1 263 2.3E-65 T 23-04-2016 LT40_RS15145 fd604307a67c235956fd11bbad6b35e6 92 PANTHER PTHR40266 1 92 5.2E-18 T 23-04-2016 LT40_RS15145 fd604307a67c235956fd11bbad6b35e6 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 3 92 2.1E-25 T 23-04-2016 IPR007711 Toxin HigB-1 LT40_RS15145 fd604307a67c235956fd11bbad6b35e6 92 PANTHER PTHR40266:SF2 1 92 5.2E-18 T 23-04-2016 LT40_RS15145 fd604307a67c235956fd11bbad6b35e6 92 SUPERFAMILY SSF143011 1 92 1.14E-17 T 23-04-2016 LT40_RS12875 c555e0abef6097f33e65946228708f4d 305 PANTHER PTHR13767 2 302 2.0E-130 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS12875 c555e0abef6097f33e65946228708f4d 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 242 3.5E-21 T 23-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal LT40_RS12875 c555e0abef6097f33e65946228708f4d 305 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 246 302 5.5E-19 T 23-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS12875 c555e0abef6097f33e65946228708f4d 305 SUPERFAMILY SSF88697 245 303 1.66E-14 T 23-04-2016 IPR015947 PUA-like domain LT40_RS12875 c555e0abef6097f33e65946228708f4d 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 302 19.143 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS12875 c555e0abef6097f33e65946228708f4d 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 6.2E-81 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS12875 c555e0abef6097f33e65946228708f4d 305 Gene3D G3DSA:2.30.130.10 244 303 6.8E-26 T 23-04-2016 IPR015947 PUA-like domain LT40_RS12875 c555e0abef6097f33e65946228708f4d 305 PANTHER PTHR13767:SF2 2 302 2.0E-130 T 23-04-2016 LT40_RS12875 c555e0abef6097f33e65946228708f4d 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 2.5E-56 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 LT40_RS12875 c555e0abef6097f33e65946228708f4d 305 SUPERFAMILY SSF55120 11 224 1.53E-81 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LT40_RS05740 bf6f1719a4c2f0cfb755dd3b36ae7362 195 SUPERFAMILY SSF101327 9 181 3.66E-21 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 LT40_RS05740 bf6f1719a4c2f0cfb755dd3b36ae7362 195 Pfam PF03695 Uncharacterised protein family (UPF0149) 9 181 3.7E-34 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 LT40_RS05740 bf6f1719a4c2f0cfb755dd3b36ae7362 195 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 6 180 3.0E-48 T 23-04-2016 IPR011978 Uncharacterised protein family UPF0149 LT40_RS06325 81db56b773dc8229ab9937438ca8a2c6 332 PIRSF PIRSF006470 1 331 5.7E-123 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 LT40_RS06325 81db56b773dc8229ab9937438ca8a2c6 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 277 3.4E-74 T 23-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 LT40_RS06325 81db56b773dc8229ab9937438ca8a2c6 332 PANTHER PTHR33376:SF7 1 332 5.1E-163 T 23-04-2016 LT40_RS06325 81db56b773dc8229ab9937438ca8a2c6 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 30 315 3.9E-102 T 23-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 LT40_RS06325 81db56b773dc8229ab9937438ca8a2c6 332 PANTHER PTHR33376 1 332 5.1E-163 T 23-04-2016 LT40_RS12170 967baa0bd4329c285a3980546f279910 305 Pfam PF02535 ZIP Zinc transporter 150 300 2.4E-27 T 23-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 LT40_RS12170 967baa0bd4329c285a3980546f279910 305 PANTHER PTHR11040:SF33 14 21 1.7E-61 T 23-04-2016 LT40_RS12170 967baa0bd4329c285a3980546f279910 305 PANTHER PTHR11040:SF33 45 305 1.7E-61 T 23-04-2016 LT40_RS12170 967baa0bd4329c285a3980546f279910 305 PANTHER PTHR11040 14 21 1.7E-61 T 23-04-2016 LT40_RS12170 967baa0bd4329c285a3980546f279910 305 PANTHER PTHR11040 45 305 1.7E-61 T 23-04-2016 LT40_RS06885 d3dcaa3c8a8af1c216d76b2aaf0e8f62 302 Pfam PF00682 HMGL-like 6 278 2.6E-57 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 LT40_RS06885 d3dcaa3c8a8af1c216d76b2aaf0e8f62 302 SUPERFAMILY SSF51569 3 290 1.25E-75 T 23-04-2016 LT40_RS06885 d3dcaa3c8a8af1c216d76b2aaf0e8f62 302 Gene3D G3DSA:3.20.20.70 6 289 2.9E-90 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS06885 d3dcaa3c8a8af1c216d76b2aaf0e8f62 302 PANTHER PTHR10277:SF40 2 294 1.3E-174 T 23-04-2016 LT40_RS06885 d3dcaa3c8a8af1c216d76b2aaf0e8f62 302 PANTHER PTHR10277 2 294 1.3E-174 T 23-04-2016 LT40_RS06885 d3dcaa3c8a8af1c216d76b2aaf0e8f62 302 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 232 241 - T 23-04-2016 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|UniPathway: UPA00896 LT40_RS13935 b359abdf2d3763830c47f544d0bf2660 336 Gene3D G3DSA:1.10.150.210 139 189 5.5E-24 T 23-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 LT40_RS13935 b359abdf2d3763830c47f544d0bf2660 336 PANTHER PTHR10000:SF7 103 332 3.7E-83 T 23-04-2016 LT40_RS13935 b359abdf2d3763830c47f544d0bf2660 336 Pfam PF12710 haloacid dehalogenase-like hydrolase 130 297 4.7E-22 T 23-04-2016 LT40_RS13935 b359abdf2d3763830c47f544d0bf2660 336 PANTHER PTHR10000 103 332 3.7E-83 T 23-04-2016 LT40_RS13935 b359abdf2d3763830c47f544d0bf2660 336 Gene3D G3DSA:3.40.50.1000 190 319 7.5E-39 T 23-04-2016 IPR023214 HAD-like domain LT40_RS13935 b359abdf2d3763830c47f544d0bf2660 336 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 114 332 4.6E-74 T 23-04-2016 LT40_RS13935 b359abdf2d3763830c47f544d0bf2660 336 SUPERFAMILY SSF56784 126 332 2.0E-49 T 23-04-2016 IPR023214 HAD-like domain LT40_RS13935 b359abdf2d3763830c47f544d0bf2660 336 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 129 299 9.9E-31 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 LT40_RS06480 efd612d54a83cd8af5f53bdc25795bca 562 PANTHER PTHR10010 1 460 3.1E-65 T 23-04-2016 LT40_RS06480 efd612d54a83cd8af5f53bdc25795bca 562 PANTHER PTHR10010:SF26 1 460 3.1E-65 T 23-04-2016 LT40_RS06480 efd612d54a83cd8af5f53bdc25795bca 562 Pfam PF02690 Na+/Pi-cotransporter 185 268 9.2E-14 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 LT40_RS06480 efd612d54a83cd8af5f53bdc25795bca 562 Pfam PF02690 Na+/Pi-cotransporter 19 153 8.7E-37 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 LT40_RS12085 c3bf5f21f48e4297836ef74e663a87a6 414 PANTHER PTHR30489:SF8 1 414 2.2E-109 T 23-04-2016 LT40_RS12085 c3bf5f21f48e4297836ef74e663a87a6 414 PANTHER PTHR30489 1 414 2.2E-109 T 23-04-2016 LT40_RS12085 c3bf5f21f48e4297836ef74e663a87a6 414 Pfam PF12704 MacB-like periplasmic core domain 27 241 2.3E-19 T 23-04-2016 IPR025857 MacB-like periplasmic core domain LT40_RS12085 c3bf5f21f48e4297836ef74e663a87a6 414 Pfam PF02687 FtsX-like permease family 274 407 1.8E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LT40_RS12085 c3bf5f21f48e4297836ef74e663a87a6 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 414 2.1E-148 T 23-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 LT40_RS06525 88ef8470fb717d5e48ed82f6775fafa6 568 Pfam PF01425 Amidase 459 544 9.4E-8 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS06525 88ef8470fb717d5e48ed82f6775fafa6 568 Pfam PF01425 Amidase 25 250 3.7E-44 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS06525 88ef8470fb717d5e48ed82f6775fafa6 568 SUPERFAMILY SSF75304 1 561 1.02E-87 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS06525 88ef8470fb717d5e48ed82f6775fafa6 568 PANTHER PTHR11895:SF8 317 561 2.2E-194 T 23-04-2016 LT40_RS06525 88ef8470fb717d5e48ed82f6775fafa6 568 PANTHER PTHR11895:SF8 1 296 2.2E-194 T 23-04-2016 LT40_RS06525 88ef8470fb717d5e48ed82f6775fafa6 568 Gene3D G3DSA:3.90.1300.10 2 565 3.2E-119 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS06525 88ef8470fb717d5e48ed82f6775fafa6 568 PANTHER PTHR11895 317 561 2.2E-194 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS06525 88ef8470fb717d5e48ed82f6775fafa6 568 PANTHER PTHR11895 1 296 2.2E-194 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LT40_RS13725 15495ddaeff36c6012318c0c2478de36 465 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 20 455 3.0E-174 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 LT40_RS13725 15495ddaeff36c6012318c0c2478de36 465 SUPERFAMILY SSF48024 18 129 2.75E-39 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LT40_RS13725 15495ddaeff36c6012318c0c2478de36 465 SUPERFAMILY SSF52540 195 446 7.94E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13725 15495ddaeff36c6012318c0c2478de36 465 Pfam PF00772 DnaB-like helicase N terminal domain 20 121 1.0E-35 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LT40_RS13725 15495ddaeff36c6012318c0c2478de36 465 Gene3D G3DSA:3.40.50.300 182 455 2.9E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13725 15495ddaeff36c6012318c0c2478de36 465 Pfam PF03796 DnaB-like helicase C terminal domain 197 453 1.8E-116 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 LT40_RS13725 15495ddaeff36c6012318c0c2478de36 465 Gene3D G3DSA:1.10.860.10 20 122 5.1E-39 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LT40_RS13725 15495ddaeff36c6012318c0c2478de36 465 PANTHER PTHR30153 4 463 1.1E-218 T 23-04-2016 LT40_RS13990 de353579a7de12d5dcebeaf8e8cb634e 248 Gene3D G3DSA:3.90.640.20 157 243 8.3E-15 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 LT40_RS13990 de353579a7de12d5dcebeaf8e8cb634e 248 Pfam PF11738 Protein of unknown function (DUF3298) 176 232 3.6E-9 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 LT40_RS13990 de353579a7de12d5dcebeaf8e8cb634e 248 Gene3D G3DSA:3.30.565.40 42 152 9.9E-13 T 23-04-2016 IPR025303 Domain of unknown function DUF4163 LT40_RS18405 fb554eb8300af3657b6a1035b9b10ad9 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.201 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LT40_RS18405 fb554eb8300af3657b6a1035b9b10ad9 122 Gene3D G3DSA:2.40.150.20 1 122 1.6E-55 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LT40_RS18405 fb554eb8300af3657b6a1035b9b10ad9 122 SMART SM01374 1 122 7.9E-86 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LT40_RS18405 fb554eb8300af3657b6a1035b9b10ad9 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 8.0E-55 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LT40_RS18405 fb554eb8300af3657b6a1035b9b10ad9 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.9E-58 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 LT40_RS18405 fb554eb8300af3657b6a1035b9b10ad9 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site LT40_RS18405 fb554eb8300af3657b6a1035b9b10ad9 122 SUPERFAMILY SSF50193 1 122 4.97E-52 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LT40_RS18405 fb554eb8300af3657b6a1035b9b10ad9 122 PANTHER PTHR11761 1 122 3.7E-78 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LT40_RS10620 88459f06fbd5b5056bd712d7e5333fde 453 PANTHER PTHR10283:SF87 1 452 8.9E-89 T 23-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 LT40_RS10620 88459f06fbd5b5056bd712d7e5333fde 453 Pfam PF03600 Citrate transporter 16 397 6.3E-36 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 LT40_RS10620 88459f06fbd5b5056bd712d7e5333fde 453 PANTHER PTHR10283 1 452 8.9E-89 T 23-04-2016 LT40_RS10620 88459f06fbd5b5056bd712d7e5333fde 453 TIGRFAM TIGR00784 citMHS: citrate transporter 1 450 3.5E-99 T 23-04-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 LT40_RS15705 1fcd88245d91e50bee728731b004d624 316 Gene3D G3DSA:3.30.200.20 1 102 1.0E-34 T 23-04-2016 LT40_RS15705 1fcd88245d91e50bee728731b004d624 316 Hamap MF_00301 Homoserine kinase [thrB]. 1 316 140.465 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 LT40_RS15705 1fcd88245d91e50bee728731b004d624 316 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 302 9.8E-84 T 23-04-2016 IPR005280 Homoserine kinase ThrB GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 LT40_RS15705 1fcd88245d91e50bee728731b004d624 316 SUPERFAMILY SSF56112 5 305 6.71E-66 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS15705 1fcd88245d91e50bee728731b004d624 316 Pfam PF01636 Phosphotransferase enzyme family 28 255 4.2E-36 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase LT40_RS15705 1fcd88245d91e50bee728731b004d624 316 PANTHER PTHR21064 10 283 2.6E-41 T 23-04-2016 LT40_RS15705 1fcd88245d91e50bee728731b004d624 316 Gene3D G3DSA:3.90.1200.10 105 306 3.1E-56 T 23-04-2016 LT40_RS19180 05e25b508ba4d3d8839308bb4b04ee26 295 PANTHER PTHR30168 2 295 7.6E-138 T 23-04-2016 LT40_RS19180 05e25b508ba4d3d8839308bb4b04ee26 295 Pfam PF04228 Putative neutral zinc metallopeptidase 1 290 1.4E-125 T 23-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative LT40_RS13525 dba4ac92bb1723f929fce66bd29d99de 160 Pfam PF04314 Protein of unknown function (DUF461) 32 139 2.2E-32 T 23-04-2016 IPR007410 DR1885-like metal-binding protein LT40_RS13525 dba4ac92bb1723f929fce66bd29d99de 160 SUPERFAMILY SSF110087 7 148 1.26E-40 T 23-04-2016 IPR007410 DR1885-like metal-binding protein LT40_RS13525 dba4ac92bb1723f929fce66bd29d99de 160 PANTHER PTHR36302 9 159 4.5E-26 T 23-04-2016 LT40_RS13525 dba4ac92bb1723f929fce66bd29d99de 160 PANTHER PTHR36302:SF1 9 159 4.5E-26 T 23-04-2016 LT40_RS14945 f85cff4e57db9611c14b0cbb4025e8d3 231 SUPERFAMILY SSF161098 10 208 2.49E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS14945 f85cff4e57db9611c14b0cbb4025e8d3 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 222 1.7E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS14945 f85cff4e57db9611c14b0cbb4025e8d3 231 PANTHER PTHR30133:SF2 4 231 2.0E-110 T 23-04-2016 LT40_RS14945 f85cff4e57db9611c14b0cbb4025e8d3 231 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 117 2.0E-19 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS14945 f85cff4e57db9611c14b0cbb4025e8d3 231 PANTHER PTHR30133 4 231 2.0E-110 T 23-04-2016 LT40_RS14945 f85cff4e57db9611c14b0cbb4025e8d3 231 Gene3D G3DSA:1.10.3720.10 11 222 2.1E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS06310 d845b87d6d981d723f4a3a75b2caa347 413 SUPERFAMILY SSF54506 198 397 1.05E-44 T 23-04-2016 LT40_RS06310 d845b87d6d981d723f4a3a75b2caa347 413 PANTHER PTHR30349 194 235 3.0E-17 T 23-04-2016 LT40_RS06310 d845b87d6d981d723f4a3a75b2caa347 413 PANTHER PTHR30349 15 136 3.0E-17 T 23-04-2016 LT40_RS06310 d845b87d6d981d723f4a3a75b2caa347 413 Gene3D G3DSA:3.10.310.10 24 203 4.6E-42 T 23-04-2016 LT40_RS06310 d845b87d6d981d723f4a3a75b2caa347 413 Pfam PF04303 PrpF protein 24 395 3.4E-64 T 23-04-2016 IPR007400 PrpF protein LT40_RS06310 d845b87d6d981d723f4a3a75b2caa347 413 PANTHER PTHR30349:SF18 194 235 3.0E-17 T 23-04-2016 LT40_RS06310 d845b87d6d981d723f4a3a75b2caa347 413 PANTHER PTHR30349:SF18 15 136 3.0E-17 T 23-04-2016 LT40_RS06310 d845b87d6d981d723f4a3a75b2caa347 413 SUPERFAMILY SSF54506 23 189 1.66E-31 T 23-04-2016 LT40_RS06310 d845b87d6d981d723f4a3a75b2caa347 413 Gene3D G3DSA:3.10.310.10 204 377 5.4E-46 T 23-04-2016 LT40_RS20235 09d9ed70fca39d9feeb22ef4ad42dd2a 84 Gene3D G3DSA:1.10.1220.10 9 48 1.1E-7 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 LT40_RS20235 09d9ed70fca39d9feeb22ef4ad42dd2a 84 SUPERFAMILY SSF47598 3 68 4.09E-20 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LT40_RS09775 9acd2f42fb53f07960b94ba7fc6a0668 209 Pfam PF09997 Predicted membrane protein (DUF2238) 33 180 2.9E-42 T 23-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 LT40_RS09775 9acd2f42fb53f07960b94ba7fc6a0668 209 PIRSF PIRSF020606 2 201 5.7E-54 T 23-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 SUPERFAMILY SSF50249 13 150 5.14E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 PANTHER PTHR22594 1 499 1.5E-270 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 210 226 1.5E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 239 252 1.5E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 381 397 1.5E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 194 204 1.5E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 257 274 1.5E-36 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 Pfam PF01336 OB-fold nucleic acid binding domain 68 140 1.1E-8 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 Pfam PF00152 tRNA synthetases class II (D, K and N) 158 496 6.1E-82 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 PANTHER PTHR22594:SF4 1 499 1.5E-270 T 23-04-2016 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 499 43.695 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 Gene3D G3DSA:3.30.930.10 152 495 3.5E-121 T 23-04-2016 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 SUPERFAMILY SSF55681 157 497 2.31E-122 T 23-04-2016 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 16 499 1.1E-201 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 LT40_RS20480 abeb63283ab399e1bbff14f2b34a22f7 500 Gene3D G3DSA:2.40.50.140 16 149 1.5E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS05310 656fbaadf4fb9276a6efa4230c4b217f 148 Pfam PF00011 Hsp20/alpha crystallin family 44 140 1.1E-16 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain LT40_RS05310 656fbaadf4fb9276a6efa4230c4b217f 148 PANTHER PTHR11527:SF127 1 147 9.3E-78 T 23-04-2016 LT40_RS05310 656fbaadf4fb9276a6efa4230c4b217f 148 Gene3D G3DSA:2.60.40.790 17 141 1.7E-18 T 23-04-2016 IPR008978 HSP20-like chaperone LT40_RS05310 656fbaadf4fb9276a6efa4230c4b217f 148 PANTHER PTHR11527 1 147 9.3E-78 T 23-04-2016 IPR031107 Small heat shock protein HSP20 LT40_RS05310 656fbaadf4fb9276a6efa4230c4b217f 148 SUPERFAMILY SSF49764 10 140 1.08E-19 T 23-04-2016 IPR008978 HSP20-like chaperone LT40_RS09160 339f93e2623596d3fbf8636fbd4fe185 527 Gene3D G3DSA:1.25.40.10 7 113 2.9E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS09160 339f93e2623596d3fbf8636fbd4fe185 527 SUPERFAMILY SSF48452 8 108 1.93E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS09160 339f93e2623596d3fbf8636fbd4fe185 527 PANTHER PTHR22916 195 499 1.1E-18 T 23-04-2016 LT40_RS09160 339f93e2623596d3fbf8636fbd4fe185 527 Gene3D G3DSA:3.90.550.10 258 492 2.2E-18 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS09160 339f93e2623596d3fbf8636fbd4fe185 527 PANTHER PTHR22916:SF26 195 499 1.1E-18 T 23-04-2016 LT40_RS09160 339f93e2623596d3fbf8636fbd4fe185 527 Pfam PF00535 Glycosyl transferase family 2 259 400 1.2E-10 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS09160 339f93e2623596d3fbf8636fbd4fe185 527 SUPERFAMILY SSF53448 255 512 2.3E-32 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS14950 28d9781456c2a4ca30a29d4ca487d7f0 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 116 4.4E-22 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS14950 28d9781456c2a4ca30a29d4ca487d7f0 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 222 1.8E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS14950 28d9781456c2a4ca30a29d4ca487d7f0 229 PANTHER PTHR30450:SF7 1 229 5.7E-124 T 23-04-2016 LT40_RS14950 28d9781456c2a4ca30a29d4ca487d7f0 229 SUPERFAMILY SSF161098 11 207 1.83E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS14950 28d9781456c2a4ca30a29d4ca487d7f0 229 PANTHER PTHR30450 1 229 5.7E-124 T 23-04-2016 LT40_RS14950 28d9781456c2a4ca30a29d4ca487d7f0 229 Gene3D G3DSA:1.10.3720.10 9 222 2.3E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS00195 767dc3c61a7b5d318dc6053555c2508d 295 Pfam PF14337 Domain of unknown function (DUF4393) 97 290 3.5E-47 T 23-04-2016 IPR025506 Protein of unknown function DUF4393 LT40_RS15360 22b178e5990c329094a1345e51a12f66 336 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 17 332 2.7E-141 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 LT40_RS15360 22b178e5990c329094a1345e51a12f66 336 PANTHER PTHR30368 1 336 5.9E-176 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 LT40_RS15360 22b178e5990c329094a1345e51a12f66 336 Pfam PF13531 Bacterial extracellular solute-binding protein 50 286 1.2E-40 T 23-04-2016 LT40_RS15360 22b178e5990c329094a1345e51a12f66 336 PANTHER PTHR30368:SF2 1 336 5.9E-176 T 23-04-2016 LT40_RS15360 22b178e5990c329094a1345e51a12f66 336 Gene3D G3DSA:3.40.190.10 119 283 6.3E-74 T 23-04-2016 LT40_RS15360 22b178e5990c329094a1345e51a12f66 336 SUPERFAMILY SSF53850 26 334 1.28E-83 T 23-04-2016 LT40_RS15360 22b178e5990c329094a1345e51a12f66 336 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 150 158 - T 23-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 LT40_RS18610 d9bd3a520fc9704dca8445659e3175f8 213 Pfam PF00925 GTP cyclohydrolase II 6 170 1.4E-66 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LT40_RS18610 d9bd3a520fc9704dca8445659e3175f8 213 PANTHER PTHR21327 3 201 1.8E-125 T 23-04-2016 LT40_RS18610 d9bd3a520fc9704dca8445659e3175f8 213 SUPERFAMILY SSF142695 3 172 1.96E-64 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LT40_RS18610 d9bd3a520fc9704dca8445659e3175f8 213 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 45.395 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LT40_RS18610 d9bd3a520fc9704dca8445659e3175f8 213 PANTHER PTHR21327:SF14 3 201 1.8E-125 T 23-04-2016 LT40_RS18610 d9bd3a520fc9704dca8445659e3175f8 213 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 194 1.3E-78 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 LT40_RS01210 71116c6c34356ebca6ee8387a5c7e648 248 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 131 2.4E-18 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS01210 71116c6c34356ebca6ee8387a5c7e648 248 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 237 9.1E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS01210 71116c6c34356ebca6ee8387a5c7e648 248 SUPERFAMILY SSF161098 24 226 7.46E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS01210 71116c6c34356ebca6ee8387a5c7e648 248 PANTHER PTHR30085:SF4 1 244 1.1E-138 T 23-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 LT40_RS01210 71116c6c34356ebca6ee8387a5c7e648 248 PANTHER PTHR30085 1 244 1.1E-138 T 23-04-2016 LT40_RS01210 71116c6c34356ebca6ee8387a5c7e648 248 Gene3D G3DSA:1.10.3720.10 24 237 9.1E-51 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS14610 84a16efc092127bf9c8575ce0da7e8f0 196 PANTHER PTHR33219 9 195 3.4E-63 T 23-04-2016 LT40_RS14610 84a16efc092127bf9c8575ce0da7e8f0 196 Pfam PF02325 YGGT family 14 80 5.6E-18 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 LT40_RS14610 84a16efc092127bf9c8575ce0da7e8f0 196 Pfam PF02325 YGGT family 109 178 1.6E-20 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 LT40_RS14610 84a16efc092127bf9c8575ce0da7e8f0 196 PANTHER PTHR33219:SF5 9 195 3.4E-63 T 23-04-2016 LT40_RS19650 b412688049ed461cfe94557fe7fdf5f8 205 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 105 182 6.1E-7 T 23-04-2016 IPR007621 TPM domain LT40_RS01250 57efec44b471b38e47a01112b0251d0c 123 ProSitePatterns PS00195 Glutaredoxin active site. 45 61 - T 23-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 LT40_RS01250 57efec44b471b38e47a01112b0251d0c 123 Pfam PF13417 Glutathione S-transferase, N-terminal domain 45 121 8.3E-11 T 23-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 LT40_RS01250 57efec44b471b38e47a01112b0251d0c 123 Gene3D G3DSA:3.40.30.10 50 121 1.5E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS01250 57efec44b471b38e47a01112b0251d0c 123 SUPERFAMILY SSF52833 43 121 1.33E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold LT40_RS01325 3596e51b2a682798a96470e5ab261267 699 PIRSF PIRSF005091 15 697 2.0E-133 T 23-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 LT40_RS01325 3596e51b2a682798a96470e5ab261267 699 Gene3D G3DSA:3.40.720.10 311 606 2.2E-38 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LT40_RS01325 3596e51b2a682798a96470e5ab261267 699 Pfam PF00884 Sulfatase 311 591 1.6E-44 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LT40_RS01325 3596e51b2a682798a96470e5ab261267 699 PANTHER PTHR10342 273 649 7.5E-81 T 23-04-2016 LT40_RS01325 3596e51b2a682798a96470e5ab261267 699 PANTHER PTHR10342:SF236 273 649 7.5E-81 T 23-04-2016 LT40_RS01325 3596e51b2a682798a96470e5ab261267 699 SUPERFAMILY SSF53649 311 686 7.27E-65 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LT40_RS10700 0913c585641e82c76354cec4b9590c5e 83 Gene3D G3DSA:1.10.1200.10 5 79 6.1E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS10700 0913c585641e82c76354cec4b9590c5e 83 Pfam PF00550 Phosphopantetheine attachment site 10 76 3.6E-6 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS10700 0913c585641e82c76354cec4b9590c5e 83 SUPERFAMILY SSF47336 5 81 1.44E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain LT40_RS07570 ff9d4f6f7bffb7832d17485de6e62ff8 265 Pfam PF01925 Sulfite exporter TauE/SafE 4 255 4.7E-40 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LT40_RS07570 ff9d4f6f7bffb7832d17485de6e62ff8 265 PANTHER PTHR30269:SF14 1 265 7.5E-45 T 23-04-2016 LT40_RS07570 ff9d4f6f7bffb7832d17485de6e62ff8 265 PANTHER PTHR30269 1 265 7.5E-45 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LT40_RS17905 b16f3823e86c62874ae0506e5341bba3 170 PANTHER PTHR30265 5 167 2.2E-26 T 23-04-2016 LT40_RS17905 b16f3823e86c62874ae0506e5341bba3 170 Gene3D G3DSA:3.30.70.940 8 105 7.2E-19 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 LT40_RS17905 b16f3823e86c62874ae0506e5341bba3 170 SMART SM00738 7 104 2.9E-17 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 LT40_RS17905 b16f3823e86c62874ae0506e5341bba3 170 Pfam PF02357 Transcription termination factor nusG 9 100 1.5E-21 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 LT40_RS17905 b16f3823e86c62874ae0506e5341bba3 170 PANTHER PTHR30265:SF3 5 167 2.2E-26 T 23-04-2016 LT40_RS17905 b16f3823e86c62874ae0506e5341bba3 170 SUPERFAMILY SSF82679 8 105 3.66E-26 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 LT40_RS17905 b16f3823e86c62874ae0506e5341bba3 170 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 10 162 1.6E-50 T 23-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 LT40_RS18850 4331c55969fc07b0bf5bb60794f3a010 439 Pfam PF01471 Putative peptidoglycan binding domain 381 435 2.7E-10 T 23-04-2016 IPR002477 Peptidoglycan binding-like LT40_RS18850 4331c55969fc07b0bf5bb60794f3a010 439 SUPERFAMILY SSF47090 369 436 3.14E-15 T 23-04-2016 IPR002477 Peptidoglycan binding-like LT40_RS18850 4331c55969fc07b0bf5bb60794f3a010 439 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 66 363 2.6E-122 T 23-04-2016 IPR011970 Lytic murein transglycosylase LT40_RS18850 4331c55969fc07b0bf5bb60794f3a010 439 Gene3D G3DSA:1.10.101.10 384 436 3.8E-11 T 23-04-2016 IPR002477 Peptidoglycan binding-like LT40_RS18850 4331c55969fc07b0bf5bb60794f3a010 439 PANTHER PTHR30163 62 437 4.5E-159 T 23-04-2016 IPR011757 Lytic transglycosylase MltB LT40_RS18850 4331c55969fc07b0bf5bb60794f3a010 439 SUPERFAMILY SSF53955 63 364 1.09E-105 T 23-04-2016 IPR023346 Lysozyme-like domain LT40_RS18850 4331c55969fc07b0bf5bb60794f3a010 439 Pfam PF13406 Transglycosylase SLT domain 66 359 4.7E-114 T 23-04-2016 IPR031304 Transglycosylase SLT domain 2 LT40_RS18850 4331c55969fc07b0bf5bb60794f3a010 439 PANTHER PTHR30163:SF2 62 437 4.5E-159 T 23-04-2016 LT40_RS18850 4331c55969fc07b0bf5bb60794f3a010 439 Gene3D G3DSA:1.10.530.10 247 363 2.3E-60 T 23-04-2016 LT40_RS18850 4331c55969fc07b0bf5bb60794f3a010 439 Gene3D G3DSA:1.10.530.10 109 166 2.3E-60 T 23-04-2016 LT40_RS02475 255c3d4fc2dab98d0f6ae5862bfa4190 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.4E-28 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LT40_RS02475 255c3d4fc2dab98d0f6ae5862bfa4190 89 PIRSF PIRSF004669 1 89 5.0E-29 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LT40_RS02475 255c3d4fc2dab98d0f6ae5862bfa4190 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 6.8E-29 T 23-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 LT40_RS02475 255c3d4fc2dab98d0f6ae5862bfa4190 89 PANTHER PTHR34040 1 89 1.5E-37 T 23-04-2016 LT40_RS02475 255c3d4fc2dab98d0f6ae5862bfa4190 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.1E-16 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LT40_RS02475 255c3d4fc2dab98d0f6ae5862bfa4190 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.1E-16 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LT40_RS02475 255c3d4fc2dab98d0f6ae5862bfa4190 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.1E-16 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 LT40_RS02475 255c3d4fc2dab98d0f6ae5862bfa4190 89 PANTHER PTHR34040:SF2 1 89 1.5E-37 T 23-04-2016 LT40_RS00795 6dcd2c2e309d8ff21fb10322a057f214 165 Gene3D G3DSA:3.40.50.150 60 143 7.6E-4 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS06080 cb74913a9ae18951de154728c336672d 179 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 91 148 5.4E-22 T 23-04-2016 IPR018637 Domain of unknown function DUF2059 LT40_RS05430 9e946cfcb8766da8e4e9f96468300a87 374 PANTHER PTHR31384 16 306 2.5E-57 T 23-04-2016 LT40_RS05430 9e946cfcb8766da8e4e9f96468300a87 374 PANTHER PTHR31384:SF26 16 306 2.5E-57 T 23-04-2016 LT40_RS05430 9e946cfcb8766da8e4e9f96468300a87 374 SUPERFAMILY SSF55729 174 344 1.7E-39 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS05430 9e946cfcb8766da8e4e9f96468300a87 374 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 9 373 1.0E-149 T 23-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition LT40_RS05430 9e946cfcb8766da8e4e9f96468300a87 374 Gene3D G3DSA:3.40.630.30 174 322 3.2E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS00590 025ef0521323723ef913a74ef7db9864 155 Gene3D G3DSA:1.10.10.10 104 153 3.6E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00590 025ef0521323723ef913a74ef7db9864 155 Gene3D G3DSA:1.10.10.10 13 57 2.7E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00590 025ef0521323723ef913a74ef7db9864 155 Gene3D G3DSA:1.10.10.10 58 101 3.7E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS00590 025ef0521323723ef913a74ef7db9864 155 Pfam PF02631 RecX family 34 150 3.6E-27 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 LT40_RS00590 025ef0521323723ef913a74ef7db9864 155 PANTHER PTHR33602 11 150 2.0E-35 T 23-04-2016 LT40_RS00590 025ef0521323723ef913a74ef7db9864 155 PANTHER PTHR33602:SF1 11 150 2.0E-35 T 23-04-2016 LT40_RS00590 025ef0521323723ef913a74ef7db9864 155 Hamap MF_01114 Regulatory protein RecX [recX]. 7 155 12.497 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 LT40_RS17230 e032a410e8c785c9032a96fdb8c2a4db 287 PIRSF PIRSF015626 24 285 2.7E-64 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 LT40_RS17230 e032a410e8c785c9032a96fdb8c2a4db 287 Gene3D G3DSA:3.40.140.10 156 281 1.9E-39 T 23-04-2016 LT40_RS17230 e032a410e8c785c9032a96fdb8c2a4db 287 Gene3D G3DSA:3.10.20.10 50 135 2.4E-25 T 23-04-2016 LT40_RS17230 e032a410e8c785c9032a96fdb8c2a4db 287 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 47 280 1.5E-45 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 LT40_RS17230 e032a410e8c785c9032a96fdb8c2a4db 287 SUPERFAMILY SSF53927 45 281 9.63E-66 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 LT40_RS17230 e032a410e8c785c9032a96fdb8c2a4db 287 PANTHER PTHR30592 47 282 5.0E-89 T 23-04-2016 LT40_RS17230 e032a410e8c785c9032a96fdb8c2a4db 287 PANTHER PTHR30592:SF1 47 282 5.0E-89 T 23-04-2016 LT40_RS17230 e032a410e8c785c9032a96fdb8c2a4db 287 Pfam PF02634 FdhD/NarQ family 48 280 1.9E-63 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 LT40_RS10640 7baa2054ed9084444dd92c09e0e06456 206 Gene3D G3DSA:3.40.50.1000 28 116 6.8E-4 T 23-04-2016 IPR023214 HAD-like domain LT40_RS10640 7baa2054ed9084444dd92c09e0e06456 206 SUPERFAMILY SSF56784 33 167 3.26E-5 T 23-04-2016 IPR023214 HAD-like domain LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PANTHER PTHR24322:SF649 162 194 1.1E-44 T 23-04-2016 LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PANTHER PTHR24322:SF649 12 145 1.1E-44 T 23-04-2016 LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.4E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.4E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 3.4E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.4E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.4E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 3.4E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 Gene3D G3DSA:3.40.50.720 10 252 6.1E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 SUPERFAMILY SSF51735 10 252 1.53E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 8.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 8.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.3E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PANTHER PTHR24322 162 194 1.1E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 PANTHER PTHR24322 12 145 1.1E-44 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 4.9E-58 T 23-04-2016 LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 180 0.004 T 23-04-2016 LT40_RS11490 9243c022dfc1a2667e907747040d95bb 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 8 398 2.2E-83 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 28 405 2.3E-158 T 23-04-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 PRINTS PR00419 Adrenodoxin reductase family signature 30 43 4.4E-7 T 23-04-2016 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 PRINTS PR00419 Adrenodoxin reductase family signature 7 29 4.4E-7 T 23-04-2016 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 SUPERFAMILY SSF51905 6 196 4.66E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 SUPERFAMILY SSF51905 345 404 4.66E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 PANTHER PTHR10617:SF103 3 306 2.2E-47 T 23-04-2016 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 PANTHER PTHR10617:SF103 338 408 2.2E-47 T 23-04-2016 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 PANTHER PTHR10617 3 306 2.2E-47 T 23-04-2016 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 PANTHER PTHR10617 338 408 2.2E-47 T 23-04-2016 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 Gene3D G3DSA:3.50.50.60 347 403 5.2E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 Gene3D G3DSA:3.50.50.60 5 192 5.2E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 Pfam PF03486 HI0933-like protein 7 399 1.6E-108 T 23-04-2016 LT40_RS19125 fe120c673fe15d9fb10799e4042094dd 408 SUPERFAMILY SSF160996 206 346 1.44E-10 T 23-04-2016 LT40_RS10940 ee87b3e3222d1b2d37c0937801254ff8 431 Gene3D G3DSA:2.40.50.100 95 129 6.4E-23 T 23-04-2016 LT40_RS10940 ee87b3e3222d1b2d37c0937801254ff8 431 Gene3D G3DSA:2.40.50.100 204 239 6.4E-23 T 23-04-2016 LT40_RS10940 ee87b3e3222d1b2d37c0937801254ff8 431 Pfam PF13437 HlyD family secretion protein 207 309 3.9E-5 T 23-04-2016 LT40_RS10940 ee87b3e3222d1b2d37c0937801254ff8 431 Pfam PF13533 Biotin-lipoyl like 96 144 9.3E-16 T 23-04-2016 LT40_RS10940 ee87b3e3222d1b2d37c0937801254ff8 431 PANTHER PTHR30469 4 44 2.0E-168 T 23-04-2016 LT40_RS10940 ee87b3e3222d1b2d37c0937801254ff8 431 PANTHER PTHR30469 67 410 2.0E-168 T 23-04-2016 LT40_RS10940 ee87b3e3222d1b2d37c0937801254ff8 431 SUPERFAMILY SSF111369 84 322 6.93E-57 T 23-04-2016 LT40_RS10940 ee87b3e3222d1b2d37c0937801254ff8 431 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 71 399 8.4E-75 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LT40_RS10940 ee87b3e3222d1b2d37c0937801254ff8 431 PANTHER PTHR30469:SF12 4 44 2.0E-168 T 23-04-2016 IPR022824 Multidrug resistance protein MdtA LT40_RS10940 ee87b3e3222d1b2d37c0937801254ff8 431 PANTHER PTHR30469:SF12 67 410 2.0E-168 T 23-04-2016 IPR022824 Multidrug resistance protein MdtA LT40_RS11710 eed89a51ed02a45a4d57bbfc24687761 531 Gene3D G3DSA:3.40.309.10 267 454 3.4E-51 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS11710 eed89a51ed02a45a4d57bbfc24687761 531 PANTHER PTHR11699 1 519 7.3E-167 T 23-04-2016 LT40_RS11710 eed89a51ed02a45a4d57bbfc24687761 531 Gene3D G3DSA:3.40.605.10 5 265 1.1E-47 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS11710 eed89a51ed02a45a4d57bbfc24687761 531 SUPERFAMILY SSF53720 23 518 3.93E-100 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS11710 eed89a51ed02a45a4d57bbfc24687761 531 PANTHER PTHR11699:SF10 1 519 7.3E-167 T 23-04-2016 LT40_RS11710 eed89a51ed02a45a4d57bbfc24687761 531 Pfam PF00171 Aldehyde dehydrogenase family 24 458 3.0E-46 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS11215 818ffadd35763e29f33dcd5bac823095 233 SUPERFAMILY SSF53597 2 226 1.96E-32 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain LT40_RS11215 818ffadd35763e29f33dcd5bac823095 233 Pfam PF01872 RibD C-terminal domain 3 214 1.6E-14 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 LT40_RS11215 818ffadd35763e29f33dcd5bac823095 233 Gene3D G3DSA:3.40.430.10 2 228 3.0E-35 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain LT40_RS00055 429c6f0d503cda9c73fbcc41f6bd9db2 181 SUPERFAMILY SSF48403 37 161 3.11E-30 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain LT40_RS00055 429c6f0d503cda9c73fbcc41f6bd9db2 181 PANTHER PTHR24198 39 165 2.8E-27 T 23-04-2016 LT40_RS00055 429c6f0d503cda9c73fbcc41f6bd9db2 181 Gene3D G3DSA:1.25.40.20 37 167 1.0E-31 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain LT40_RS00055 429c6f0d503cda9c73fbcc41f6bd9db2 181 Pfam PF12796 Ankyrin repeats (3 copies) 39 122 1.8E-9 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain LT40_RS00055 429c6f0d503cda9c73fbcc41f6bd9db2 181 SMART SM00248 97 126 78.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 LT40_RS00055 429c6f0d503cda9c73fbcc41f6bd9db2 181 SMART SM00248 64 93 0.015 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 LT40_RS00055 429c6f0d503cda9c73fbcc41f6bd9db2 181 SMART SM00248 130 159 0.35 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 LT40_RS19105 3bc0ba4394e8d163c713a16f08194697 159 PANTHER PTHR35458:SF2 1 156 3.1E-58 T 23-04-2016 LT40_RS19105 3bc0ba4394e8d163c713a16f08194697 159 PANTHER PTHR35458 1 156 3.1E-58 T 23-04-2016 LT40_RS19105 3bc0ba4394e8d163c713a16f08194697 159 Pfam PF01936 NYN domain 3 151 9.1E-37 T 23-04-2016 IPR021139 NYN domain, limkain-b1-type LT40_RS19105 3bc0ba4394e8d163c713a16f08194697 159 Gene3D G3DSA:3.40.50.1010 2 152 8.6E-43 T 23-04-2016 IPR029060 PIN domain-like LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PANTHER PTHR11206:SF90 217 442 2.6E-94 T 23-04-2016 LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PANTHER PTHR11206:SF90 70 82 2.6E-94 T 23-04-2016 LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PANTHER PTHR11206:SF90 469 493 2.6E-94 T 23-04-2016 LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PIRSF PIRSF002869 1 511 1.4E-172 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 507 1.1E-159 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PRINTS PR01806 Virulence factor MviN signature 157 178 1.4E-86 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PRINTS PR01806 Virulence factor MviN signature 133 157 1.4E-86 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PRINTS PR01806 Virulence factor MviN signature 357 376 1.4E-86 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PRINTS PR01806 Virulence factor MviN signature 33 52 1.4E-86 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PRINTS PR01806 Virulence factor MviN signature 52 68 1.4E-86 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PRINTS PR01806 Virulence factor MviN signature 259 285 1.4E-86 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PRINTS PR01806 Virulence factor MviN signature 409 426 1.4E-86 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 Pfam PF03023 MviN-like protein 28 477 9.2E-153 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PANTHER PTHR11206 217 442 2.6E-94 T 23-04-2016 LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PANTHER PTHR11206 70 82 2.6E-94 T 23-04-2016 LT40_RS19440 d5a3d40fc15736fce0c82b97d8826ac8 512 PANTHER PTHR11206 469 493 2.6E-94 T 23-04-2016 LT40_RS04685 869c2ceb231b52c71ca1ddcb80068a12 116 SUPERFAMILY SSF46785 7 84 2.72E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04685 869c2ceb231b52c71ca1ddcb80068a12 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 4.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS04685 869c2ceb231b52c71ca1ddcb80068a12 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 4.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS04685 869c2ceb231b52c71ca1ddcb80068a12 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 4.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS04685 869c2ceb231b52c71ca1ddcb80068a12 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 4.3E-21 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS04685 869c2ceb231b52c71ca1ddcb80068a12 116 SMART SM00418 7 85 4.0E-29 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS04685 869c2ceb231b52c71ca1ddcb80068a12 116 PANTHER PTHR33154 8 101 1.9E-23 T 23-04-2016 LT40_RS04685 869c2ceb231b52c71ca1ddcb80068a12 116 Pfam PF01022 Bacterial regulatory protein, arsR family 14 59 1.1E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS04685 869c2ceb231b52c71ca1ddcb80068a12 116 Gene3D G3DSA:1.10.10.10 7 85 2.0E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS17440 7e3a5b7f88216c3c88d83986224df89b 315 TIGRFAM TIGR03414 ABC_choline_bnd: choline ABC transporter, periplasmic binding protein 21 313 4.7E-146 T 23-04-2016 IPR017783 ABC transporter, choline, substrate-binding protein GO:0015871|GO:0033265|GO:0042597 LT40_RS17440 7e3a5b7f88216c3c88d83986224df89b 315 Gene3D G3DSA:3.40.190.100 116 235 1.0E-17 T 23-04-2016 LT40_RS17440 7e3a5b7f88216c3c88d83986224df89b 315 PANTHER PTHR30177 19 289 2.5E-139 T 23-04-2016 LT40_RS17440 7e3a5b7f88216c3c88d83986224df89b 315 SUPERFAMILY SSF53850 22 301 2.31E-81 T 23-04-2016 LT40_RS17440 7e3a5b7f88216c3c88d83986224df89b 315 Gene3D G3DSA:3.40.190.10 22 111 1.4E-45 T 23-04-2016 LT40_RS17440 7e3a5b7f88216c3c88d83986224df89b 315 Gene3D G3DSA:3.40.190.10 236 301 1.4E-45 T 23-04-2016 LT40_RS17440 7e3a5b7f88216c3c88d83986224df89b 315 PANTHER PTHR30177:SF6 19 289 2.5E-139 T 23-04-2016 LT40_RS17440 7e3a5b7f88216c3c88d83986224df89b 315 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 285 7.1E-52 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LT40_RS15440 9c35ad6b44e236b1f5f84c3f0fab5e62 209 PIRSF PIRSF006324 1 206 4.6E-51 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS15440 9c35ad6b44e236b1f5f84c3f0fab5e62 209 PANTHER PTHR30086 1 206 1.0E-79 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS15440 9c35ad6b44e236b1f5f84c3f0fab5e62 209 PANTHER PTHR30086:SF4 1 206 1.0E-79 T 23-04-2016 LT40_RS15440 9c35ad6b44e236b1f5f84c3f0fab5e62 209 Pfam PF01810 LysE type translocator 15 203 9.8E-26 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS18560 3fb82c4e59149303cf41b5fac312d1e6 153 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 63 130 3.0E-6 T 23-04-2016 LT40_RS04180 7b5f2523fc364fc4ec87fb194cd84c0d 238 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 18 226 5.3E-52 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 LT40_RS04180 7b5f2523fc364fc4ec87fb194cd84c0d 238 SUPERFAMILY SSF56112 30 193 9.35E-8 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS04180 7b5f2523fc364fc4ec87fb194cd84c0d 238 PIRSF PIRSF026326 1 238 1.3E-98 T 23-04-2016 IPR027023 Putative lipopolysaccharide kinase InaA LT40_RS00645 3a5609e1d65bd3a9968820be498ac379 632 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 13 632 34.096 T 23-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup LT40_RS00645 3a5609e1d65bd3a9968820be498ac379 632 PANTHER PTHR30540 24 558 7.1E-240 T 23-04-2016 LT40_RS00645 3a5609e1d65bd3a9968820be498ac379 632 Pfam PF02705 K+ potassium transporter 22 554 1.2E-207 T 23-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 LT40_RS00645 3a5609e1d65bd3a9968820be498ac379 632 PANTHER PTHR30540:SF7 24 558 7.1E-240 T 23-04-2016 LT40_RS20575 794763873928d2c75c384bfd92f1ba22 133 PANTHER PTHR38013 1 128 6.8E-36 T 23-04-2016 LT40_RS20575 794763873928d2c75c384bfd92f1ba22 133 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 23 122 3.2E-34 T 23-04-2016 LT40_RS17245 cd3bbc54466a804225bc9802d10a9b29 188 Pfam PF00293 NUDIX domain 48 161 7.9E-14 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LT40_RS17245 cd3bbc54466a804225bc9802d10a9b29 188 Gene3D G3DSA:3.90.79.10 6 180 5.1E-39 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS17245 cd3bbc54466a804225bc9802d10a9b29 188 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LT40_RS17245 cd3bbc54466a804225bc9802d10a9b29 188 PANTHER PTHR11839 2 180 2.4E-84 T 23-04-2016 LT40_RS17245 cd3bbc54466a804225bc9802d10a9b29 188 PANTHER PTHR11839:SF12 2 180 2.4E-84 T 23-04-2016 LT40_RS17245 cd3bbc54466a804225bc9802d10a9b29 188 SUPERFAMILY SSF55811 5 179 7.58E-36 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS19800 314250640bd5d07e0d488ccc8e52bf1e 201 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 172 1.9E-43 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 LT40_RS19800 314250640bd5d07e0d488ccc8e52bf1e 201 PANTHER PTHR33284 1 201 2.6E-58 T 23-04-2016 LT40_RS19800 314250640bd5d07e0d488ccc8e52bf1e 201 Gene3D G3DSA:2.170.120.20 100 194 1.3E-29 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain LT40_RS19800 314250640bd5d07e0d488ccc8e52bf1e 201 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 185 29.238 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 LT40_RS19800 314250640bd5d07e0d488ccc8e52bf1e 201 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 97 2.0E-33 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 LT40_RS19800 314250640bd5d07e0d488ccc8e52bf1e 201 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 102 188 1.1E-26 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain LT40_RS19800 314250640bd5d07e0d488ccc8e52bf1e 201 Pfam PF01386 Ribosomal L25p family 6 94 1.6E-26 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 LT40_RS19800 314250640bd5d07e0d488ccc8e52bf1e 201 SUPERFAMILY SSF50715 4 194 5.23E-55 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 LT40_RS19800 314250640bd5d07e0d488ccc8e52bf1e 201 Gene3D G3DSA:2.40.240.10 4 97 2.6E-32 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 LT40_RS08960 d9f0ca88efa1a0edba432b12ab49f2bf 435 PANTHER PTHR11271 29 434 6.9E-165 T 23-04-2016 LT40_RS08960 d9f0ca88efa1a0edba432b12ab49f2bf 435 PANTHER PTHR11271:SF6 29 434 6.9E-165 T 23-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 LT40_RS08960 d9f0ca88efa1a0edba432b12ab49f2bf 435 Gene3D G3DSA:3.20.20.140 81 374 8.3E-118 T 23-04-2016 LT40_RS08960 d9f0ca88efa1a0edba432b12ab49f2bf 435 Gene3D G3DSA:2.30.40.10 32 80 3.2E-10 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS08960 d9f0ca88efa1a0edba432b12ab49f2bf 435 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 28 428 8.5E-192 T 23-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 LT40_RS08960 d9f0ca88efa1a0edba432b12ab49f2bf 435 Pfam PF01979 Amidohydrolase family 70 431 1.5E-70 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 LT40_RS08960 d9f0ca88efa1a0edba432b12ab49f2bf 435 SUPERFAMILY SSF51556 72 374 1.36E-102 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS08960 d9f0ca88efa1a0edba432b12ab49f2bf 435 SUPERFAMILY SSF51338 32 73 1.98E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS08960 d9f0ca88efa1a0edba432b12ab49f2bf 435 SUPERFAMILY SSF51338 374 433 1.98E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LT40_RS18605 3d94d295355397d3fc5046f7c0e290b2 247 PANTHER PTHR35936:SF2 24 239 1.6E-63 T 23-04-2016 LT40_RS18605 3d94d295355397d3fc5046f7c0e290b2 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 236 6.4E-10 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS18605 3d94d295355397d3fc5046f7c0e290b2 247 PANTHER PTHR35936 24 239 1.6E-63 T 23-04-2016 LT40_RS18605 3d94d295355397d3fc5046f7c0e290b2 247 SUPERFAMILY SSF53850 39 236 1.96E-21 T 23-04-2016 LT40_RS20465 75bb0ba2fa5822a8c2d0b8ec50f3ce0b 337 SUPERFAMILY SSF52172 14 144 2.99E-29 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS20465 75bb0ba2fa5822a8c2d0b8ec50f3ce0b 337 PANTHER PTHR10799:SF750 54 331 8.8E-33 T 23-04-2016 LT40_RS20465 75bb0ba2fa5822a8c2d0b8ec50f3ce0b 337 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 330 7.6E-48 T 23-04-2016 IPR000160 GGDEF domain LT40_RS20465 75bb0ba2fa5822a8c2d0b8ec50f3ce0b 337 Gene3D G3DSA:3.30.70.270 171 335 2.0E-52 T 23-04-2016 LT40_RS20465 75bb0ba2fa5822a8c2d0b8ec50f3ce0b 337 SMART SM00448 17 131 4.3E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20465 75bb0ba2fa5822a8c2d0b8ec50f3ce0b 337 PANTHER PTHR10799 54 331 8.8E-33 T 23-04-2016 LT40_RS20465 75bb0ba2fa5822a8c2d0b8ec50f3ce0b 337 Gene3D G3DSA:3.40.50.2300 15 136 4.3E-28 T 23-04-2016 LT40_RS20465 75bb0ba2fa5822a8c2d0b8ec50f3ce0b 337 SUPERFAMILY SSF55073 174 333 8.63E-48 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS20465 75bb0ba2fa5822a8c2d0b8ec50f3ce0b 337 Pfam PF00072 Response regulator receiver domain 19 131 6.8E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20465 75bb0ba2fa5822a8c2d0b8ec50f3ce0b 337 SMART SM00267 155 334 8.0E-57 T 23-04-2016 IPR000160 GGDEF domain LT40_RS20465 75bb0ba2fa5822a8c2d0b8ec50f3ce0b 337 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 165 333 1.1E-50 T 23-04-2016 IPR000160 GGDEF domain LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 Gene3D G3DSA:3.40.50.1820 12 300 8.8E-65 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 PRINTS PR00412 Epoxide hydrolase signature 275 297 1.1E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 PRINTS PR00412 Epoxide hydrolase signature 49 67 1.1E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 PRINTS PR00412 Epoxide hydrolase signature 129 142 1.1E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 PRINTS PR00412 Epoxide hydrolase signature 115 128 1.1E-7 T 23-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 SUPERFAMILY SSF53474 16 299 3.13E-66 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 PANTHER PTHR10992 20 185 1.8E-120 T 23-04-2016 LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 PANTHER PTHR10992:SF26 201 300 1.8E-120 T 23-04-2016 LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 PANTHER PTHR10992 201 300 1.8E-120 T 23-04-2016 LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 68 83 3.8E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 129 142 3.8E-5 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 Pfam PF00561 alpha/beta hydrolase fold 43 144 4.6E-18 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS08350 34a2288cf559e611c4caa2ca823b96bf 303 PANTHER PTHR10992:SF26 20 185 1.8E-120 T 23-04-2016 LT40_RS16550 9141298af0cdf1bf7a7575437996d432 77 SUPERFAMILY SSF143800 1 75 2.16E-30 T 23-04-2016 LT40_RS16550 9141298af0cdf1bf7a7575437996d432 77 PANTHER PTHR13528 1 72 8.7E-35 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 LT40_RS16550 9141298af0cdf1bf7a7575437996d432 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 74 21.894 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS16550 9141298af0cdf1bf7a7575437996d432 77 Pfam PF00830 Ribosomal L28 family 3 61 8.7E-29 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 LT40_RS16550 9141298af0cdf1bf7a7575437996d432 77 Gene3D G3DSA:2.30.170.40 2 75 8.6E-36 T 23-04-2016 LT40_RS16550 9141298af0cdf1bf7a7575437996d432 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.2E-29 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18710 adceebdda390de47a1db6d3fca873b1f 440 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 281 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS18710 adceebdda390de47a1db6d3fca873b1f 440 Pfam PF00202 Aminotransferase class-III 30 431 1.1E-92 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS18710 adceebdda390de47a1db6d3fca873b1f 440 SUPERFAMILY SSF53383 7 433 1.99E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS18710 adceebdda390de47a1db6d3fca873b1f 440 Gene3D G3DSA:3.40.640.10 65 317 1.8E-74 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS18710 adceebdda390de47a1db6d3fca873b1f 440 Gene3D G3DSA:3.90.1150.10 318 433 1.6E-31 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS18710 adceebdda390de47a1db6d3fca873b1f 440 PANTHER PTHR11986 10 439 7.4E-129 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 LT40_RS06660 268fe5b601d67d94d1d317f500d1da50 234 PANTHER PTHR30050:SF5 1 232 2.3E-107 T 23-04-2016 LT40_RS06660 268fe5b601d67d94d1d317f500d1da50 234 SUPERFAMILY SSF52540 43 213 1.97E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06660 268fe5b601d67d94d1d317f500d1da50 234 Gene3D G3DSA:1.10.8.60 168 234 2.4E-29 T 23-04-2016 LT40_RS06660 268fe5b601d67d94d1d317f500d1da50 234 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 232 3.1E-85 T 23-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 LT40_RS06660 268fe5b601d67d94d1d317f500d1da50 234 Pfam PF00308 Bacterial dnaA protein 15 212 3.6E-20 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA LT40_RS06660 268fe5b601d67d94d1d317f500d1da50 234 Gene3D G3DSA:3.40.50.300 2 164 3.2E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06660 268fe5b601d67d94d1d317f500d1da50 234 PANTHER PTHR30050 1 232 2.3E-107 T 23-04-2016 LT40_RS12080 4e4fbd3e43c7025f667eb3d99d3ac1fe 276 SUPERFAMILY SSF55620 180 266 6.0E-10 T 23-04-2016 LT40_RS12080 4e4fbd3e43c7025f667eb3d99d3ac1fe 276 PANTHER PTHR34354 1 276 1.1E-89 T 23-04-2016 LT40_RS12080 4e4fbd3e43c7025f667eb3d99d3ac1fe 276 Gene3D G3DSA:3.30.1130.10 141 276 2.1E-49 T 23-04-2016 LT40_RS12080 4e4fbd3e43c7025f667eb3d99d3ac1fe 276 PIRSF PIRSF004750 1 276 5.8E-119 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS12080 4e4fbd3e43c7025f667eb3d99d3ac1fe 276 TIGRFAM TIGR03138 QueF: queuine synthase 5 276 7.4E-120 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS12080 4e4fbd3e43c7025f667eb3d99d3ac1fe 276 PANTHER PTHR34354:SF1 1 276 1.1E-89 T 23-04-2016 LT40_RS12080 4e4fbd3e43c7025f667eb3d99d3ac1fe 276 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 276 148.214 T 23-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS12080 4e4fbd3e43c7025f667eb3d99d3ac1fe 276 Gene3D G3DSA:3.30.1130.10 16 133 4.4E-40 T 23-04-2016 LT40_RS12080 4e4fbd3e43c7025f667eb3d99d3ac1fe 276 Pfam PF14489 QueF-like protein 190 265 1.3E-23 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS12080 4e4fbd3e43c7025f667eb3d99d3ac1fe 276 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 16 125 1.6E-45 T 23-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 LT40_RS11970 f0bd5de4d2644a4545444873137ef77d 291 Gene3D G3DSA:3.40.190.10 157 229 1.0E-19 T 23-04-2016 LT40_RS11970 f0bd5de4d2644a4545444873137ef77d 291 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 269 8.8E-51 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS11970 f0bd5de4d2644a4545444873137ef77d 291 PANTHER PTHR18966:SF191 46 267 8.6E-46 T 23-04-2016 LT40_RS11970 f0bd5de4d2644a4545444873137ef77d 291 SUPERFAMILY SSF53850 6 272 3.45E-60 T 23-04-2016 LT40_RS11970 f0bd5de4d2644a4545444873137ef77d 291 Gene3D G3DSA:3.40.190.10 13 156 3.9E-37 T 23-04-2016 LT40_RS11970 f0bd5de4d2644a4545444873137ef77d 291 SMART SM00062 50 272 1.4E-69 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS11970 f0bd5de4d2644a4545444873137ef77d 291 PANTHER PTHR18966 46 267 8.6E-46 T 23-04-2016 LT40_RS13175 e8a44df5eb7941c7d14878ddf3696853 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 291 8.6E-36 T 23-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 LT40_RS13175 e8a44df5eb7941c7d14878ddf3696853 296 PANTHER PTHR22981 1 293 3.7E-128 T 23-04-2016 LT40_RS13175 e8a44df5eb7941c7d14878ddf3696853 296 SUPERFAMILY SSF51735 1 161 1.22E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS13175 e8a44df5eb7941c7d14878ddf3696853 296 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 5 291 7.6E-132 T 23-04-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|UniPathway: UPA00362 LT40_RS13175 e8a44df5eb7941c7d14878ddf3696853 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 23-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 LT40_RS13175 e8a44df5eb7941c7d14878ddf3696853 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 1.4E-49 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LT40_RS13175 e8a44df5eb7941c7d14878ddf3696853 296 Gene3D G3DSA:1.10.1040.10 163 293 8.5E-48 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LT40_RS13175 e8a44df5eb7941c7d14878ddf3696853 296 SUPERFAMILY SSF48179 162 292 9.41E-41 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LT40_RS13175 e8a44df5eb7941c7d14878ddf3696853 296 PIRSF PIRSF000103 1 296 2.6E-77 T 23-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 LT40_RS13175 e8a44df5eb7941c7d14878ddf3696853 296 Gene3D G3DSA:3.40.50.720 1 162 3.9E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS16650 7101d88886852119606ef93da5a8ef79 457 Pfam PF07063 Domain of unknown function (DUF1338) 9 404 3.7E-120 T 23-04-2016 IPR009770 Domain of unknown function DUF1338 LT40_RS16650 7101d88886852119606ef93da5a8ef79 457 PANTHER PTHR39479:SF2 1 456 1.6E-245 T 23-04-2016 LT40_RS16650 7101d88886852119606ef93da5a8ef79 457 PANTHER PTHR39479 1 456 1.6E-245 T 23-04-2016 LT40_RS16650 7101d88886852119606ef93da5a8ef79 457 SMART SM01150 10 404 5.0E-223 T 23-04-2016 IPR009770 Domain of unknown function DUF1338 LT40_RS05920 e063b6f319ee817521ce674696c652b4 242 Pfam PF01738 Dienelactone hydrolase family 29 239 1.7E-46 T 23-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 LT40_RS05920 e063b6f319ee817521ce674696c652b4 242 Gene3D G3DSA:3.40.50.1820 5 238 6.5E-47 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS05920 e063b6f319ee817521ce674696c652b4 242 PANTHER PTHR22946 1 240 5.1E-107 T 23-04-2016 LT40_RS05920 e063b6f319ee817521ce674696c652b4 242 SUPERFAMILY SSF53474 5 238 7.16E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS05920 e063b6f319ee817521ce674696c652b4 242 PANTHER PTHR22946:SF4 1 240 5.1E-107 T 23-04-2016 LT40_RS04050 7fbdc63c507b0f5ea564a79aadc7c569 404 PANTHER PTHR30474:SF2 19 398 7.2E-158 T 23-04-2016 LT40_RS04050 7fbdc63c507b0f5ea564a79aadc7c569 404 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 338 362 - T 23-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 LT40_RS04050 7fbdc63c507b0f5ea564a79aadc7c569 404 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 23 379 1.1E-128 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 LT40_RS04050 7fbdc63c507b0f5ea564a79aadc7c569 404 PANTHER PTHR30474 19 398 7.2E-158 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LT40_RS04050 7fbdc63c507b0f5ea564a79aadc7c569 404 Pfam PF01098 Cell cycle protein 25 380 3.4E-101 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LT40_RS04050 7fbdc63c507b0f5ea564a79aadc7c569 404 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 20 389 40.17 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 LT40_RS15235 2d70c83c244e9d817ca8e2972b8c9d92 345 Gene3D G3DSA:3.40.190.10 142 282 3.9E-34 T 23-04-2016 LT40_RS15235 2d70c83c244e9d817ca8e2972b8c9d92 345 PANTHER PTHR30222 11 343 1.9E-112 T 23-04-2016 LT40_RS15235 2d70c83c244e9d817ca8e2972b8c9d92 345 Pfam PF13416 Bacterial extracellular solute-binding protein 55 301 7.7E-35 T 23-04-2016 LT40_RS15235 2d70c83c244e9d817ca8e2972b8c9d92 345 SUPERFAMILY SSF53850 26 328 5.43E-59 T 23-04-2016 LT40_RS15235 2d70c83c244e9d817ca8e2972b8c9d92 345 Gene3D G3DSA:3.40.190.10 40 141 2.4E-11 T 23-04-2016 LT40_RS15235 2d70c83c244e9d817ca8e2972b8c9d92 345 PANTHER PTHR30222:SF2 11 343 1.9E-112 T 23-04-2016 LT40_RS17690 47dd667f6bf700abcb28bb7e84d0f2bb 244 Gene3D G3DSA:3.90.1200.10 118 179 3.5E-7 T 23-04-2016 LT40_RS17690 47dd667f6bf700abcb28bb7e84d0f2bb 244 SUPERFAMILY SSF56112 35 191 4.24E-16 T 23-04-2016 IPR011009 Protein kinase-like domain LT40_RS17690 47dd667f6bf700abcb28bb7e84d0f2bb 244 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 154 166 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 LT40_RS17690 47dd667f6bf700abcb28bb7e84d0f2bb 244 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 37 178 1.3E-17 T 23-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 LT40_RS20845 b7902379b2a9170f1719092b2ca92647 375 PANTHER PTHR22935:SF64 29 375 2.1E-59 T 23-04-2016 LT40_RS20845 b7902379b2a9170f1719092b2ca92647 375 ProSitePatterns PS00336 Beta-lactamase class-C active site. 77 84 - T 23-04-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 LT40_RS20845 b7902379b2a9170f1719092b2ca92647 375 SUPERFAMILY SSF56601 23 373 7.57E-88 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS20845 b7902379b2a9170f1719092b2ca92647 375 Pfam PF00144 Beta-lactamase 32 363 1.0E-69 T 23-04-2016 IPR001466 Beta-lactamase-related LT40_RS20845 b7902379b2a9170f1719092b2ca92647 375 Gene3D G3DSA:3.40.710.10 29 373 3.0E-74 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS20845 b7902379b2a9170f1719092b2ca92647 375 PANTHER PTHR22935 29 375 2.1E-59 T 23-04-2016 LT40_RS11160 d98f7d106fa679f94dce7be3623f261d 293 SUPERFAMILY SSF103481 178 277 2.22E-12 T 23-04-2016 LT40_RS11160 d98f7d106fa679f94dce7be3623f261d 293 PANTHER PTHR32322:SF9 1 279 8.9E-83 T 23-04-2016 LT40_RS11160 d98f7d106fa679f94dce7be3623f261d 293 Pfam PF00892 EamA-like transporter family 136 274 9.7E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS11160 d98f7d106fa679f94dce7be3623f261d 293 Pfam PF00892 EamA-like transporter family 2 124 5.0E-12 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS11160 d98f7d106fa679f94dce7be3623f261d 293 SUPERFAMILY SSF103481 37 128 2.62E-10 T 23-04-2016 LT40_RS11160 d98f7d106fa679f94dce7be3623f261d 293 PANTHER PTHR32322 1 279 8.9E-83 T 23-04-2016 LT40_RS16785 a580fa9cf707d4fa394b8d632d87a7dc 378 PANTHER PTHR38043 2 372 6.4E-50 T 23-04-2016 LT40_RS16785 a580fa9cf707d4fa394b8d632d87a7dc 378 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 32 358 1.5E-82 T 23-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX LT40_RS18535 197ef3ce759283f7f8ab92c06a7c903c 421 Pfam PF02687 FtsX-like permease family 294 412 1.1E-20 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LT40_RS18535 197ef3ce759283f7f8ab92c06a7c903c 421 Pfam PF12704 MacB-like periplasmic core domain 19 203 7.9E-13 T 23-04-2016 IPR025857 MacB-like periplasmic core domain LT40_RS18535 197ef3ce759283f7f8ab92c06a7c903c 421 PANTHER PTHR30489 228 420 2.3E-114 T 23-04-2016 LT40_RS18535 197ef3ce759283f7f8ab92c06a7c903c 421 PANTHER PTHR30489 1 204 2.3E-114 T 23-04-2016 LT40_RS18535 197ef3ce759283f7f8ab92c06a7c903c 421 PANTHER PTHR30489:SF2 228 420 2.3E-114 T 23-04-2016 LT40_RS18535 197ef3ce759283f7f8ab92c06a7c903c 421 PANTHER PTHR30489:SF2 1 204 2.3E-114 T 23-04-2016 LT40_RS03960 fa91fd2865e1f12c7d49968c2e8ddf03 143 Pfam PF04386 Stringent starvation protein B 4 143 5.0E-37 T 23-04-2016 IPR007481 Stringent starvation protein B LT40_RS03960 fa91fd2865e1f12c7d49968c2e8ddf03 143 PANTHER PTHR37486 1 143 8.0E-74 T 23-04-2016 LT40_RS03960 fa91fd2865e1f12c7d49968c2e8ddf03 143 PANTHER PTHR37486:SF1 1 143 8.0E-74 T 23-04-2016 LT40_RS03960 fa91fd2865e1f12c7d49968c2e8ddf03 143 SUPERFAMILY SSF101738 1 111 1.7E-47 T 23-04-2016 IPR007481 Stringent starvation protein B LT40_RS03960 fa91fd2865e1f12c7d49968c2e8ddf03 143 Gene3D G3DSA:2.30.30.220 1 103 9.0E-48 T 23-04-2016 IPR007481 Stringent starvation protein B LT40_RS03960 fa91fd2865e1f12c7d49968c2e8ddf03 143 PIRSF PIRSF005276 1 143 1.4E-57 T 23-04-2016 IPR007481 Stringent starvation protein B LT40_RS03915 27ea07ff711c75ae02292c47cc96e780 364 PANTHER PTHR12169 1 364 1.2E-189 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 LT40_RS03915 27ea07ff711c75ae02292c47cc96e780 364 Gene3D G3DSA:3.40.50.300 5 169 1.5E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03915 27ea07ff711c75ae02292c47cc96e780 364 SUPERFAMILY SSF52540 54 181 9.58E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS03915 27ea07ff711c75ae02292c47cc96e780 364 PANTHER PTHR12169:SF11 1 364 1.2E-189 T 23-04-2016 LT40_RS03915 27ea07ff711c75ae02292c47cc96e780 364 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 364 53.537 T 23-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 LT40_RS03915 27ea07ff711c75ae02292c47cc96e780 364 Pfam PF03969 AFG1-like ATPase 1 360 1.3E-159 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 LT40_RS15850 81486a7501dd8fbd457ec9fc913d963e 351 PIRSF PIRSF029285 3 350 9.8E-159 T 23-04-2016 IPR014553 Predicted aminopeptidase LT40_RS15850 81486a7501dd8fbd457ec9fc913d963e 351 Pfam PF10023 Putative aminopeptidase 28 346 7.8E-136 T 23-04-2016 IPR014553 Predicted aminopeptidase LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 SUPERFAMILY SSF81901 24 219 1.48E-35 T 23-04-2016 LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 Gene3D G3DSA:1.25.40.10 23 112 1.2E-19 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 Gene3D G3DSA:1.25.40.10 117 221 2.5E-18 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 SMART SM00671 78 113 0.032 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 SMART SM00671 186 217 53.0 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 SMART SM00671 42 77 1.3E-7 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 SMART SM00671 116 149 3.7 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 SMART SM00671 150 185 1.4 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 Pfam PF08238 Sel1 repeat 117 149 0.017 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 Pfam PF08238 Sel1 repeat 199 217 4.3 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 Pfam PF08238 Sel1 repeat 43 77 7.5E-8 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 Pfam PF08238 Sel1 repeat 79 112 0.43 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 Pfam PF08238 Sel1 repeat 151 185 42.0 T 23-04-2016 IPR006597 Sel1-like repeat LT40_RS19755 b53e79819d4bcf3c6a9232ac3f266280 252 PANTHER PTHR11102 25 218 7.5E-35 T 23-04-2016 LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 PANTHER PTHR24322:SF392 7 136 2.4E-84 T 23-04-2016 LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 PANTHER PTHR24322:SF392 152 184 2.4E-84 T 23-04-2016 LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 SUPERFAMILY SSF51735 4 237 6.54E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.2E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.2E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.2E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.2E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.2E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.2E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 PANTHER PTHR24322 7 136 2.4E-84 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 PANTHER PTHR24322 152 184 2.4E-84 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 Pfam PF00106 short chain dehydrogenase 4 189 3.3E-48 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 Gene3D G3DSA:3.40.50.720 4 237 8.6E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS13660 0679e4b5062a6c4f8af3d848019d4979 255 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 0.0016 T 23-04-2016 LT40_RS04205 327e1d41cc9df34960d3b6aba2657ada 450 Pfam PF09375 Imelysin 71 427 1.6E-98 T 23-04-2016 LT40_RS18765 9148df4e028b2c3ebca142cb6a76a9f7 238 PANTHER PTHR30249:SF5 1 237 1.9E-82 T 23-04-2016 LT40_RS18765 9148df4e028b2c3ebca142cb6a76a9f7 238 Pfam PF04172 LrgB-like family 23 234 8.6E-69 T 23-04-2016 IPR007300 CidB/LrgB family LT40_RS18765 9148df4e028b2c3ebca142cb6a76a9f7 238 PANTHER PTHR30249 1 237 1.9E-82 T 23-04-2016 LT40_RS05730 29f4e37d3fd81ce52abe33b1c0b621c8 452 Pfam PF02321 Outer membrane efflux protein 237 414 1.1E-25 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS05730 29f4e37d3fd81ce52abe33b1c0b621c8 452 Pfam PF02321 Outer membrane efflux protein 25 212 2.1E-15 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LT40_RS05730 29f4e37d3fd81ce52abe33b1c0b621c8 452 PANTHER PTHR30026:SF3 1 450 1.9E-71 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LT40_RS05730 29f4e37d3fd81ce52abe33b1c0b621c8 452 PANTHER PTHR30026 1 450 1.9E-71 T 23-04-2016 LT40_RS05730 29f4e37d3fd81ce52abe33b1c0b621c8 452 SUPERFAMILY SSF56954 3 425 2.09E-76 T 23-04-2016 LT40_RS05730 29f4e37d3fd81ce52abe33b1c0b621c8 452 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 430 1.3E-91 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 LT40_RS05730 29f4e37d3fd81ce52abe33b1c0b621c8 452 Gene3D G3DSA:1.20.1600.10 19 425 1.7E-59 T 23-04-2016 LT40_RS16330 1a8331b78ca59506b5cb08b91b6440bc 82 PANTHER PTHR33884:SF1 1 82 2.0E-28 T 23-04-2016 LT40_RS16330 1a8331b78ca59506b5cb08b91b6440bc 82 Pfam PF04226 Transglycosylase associated protein 33 80 3.4E-12 T 23-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 LT40_RS16330 1a8331b78ca59506b5cb08b91b6440bc 82 PANTHER PTHR33884 1 82 2.0E-28 T 23-04-2016 LT40_RS11705 6f45a922eb093db2bde3d2a7b1a263c1 515 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 113 513 1.8E-161 T 23-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 LT40_RS11705 6f45a922eb093db2bde3d2a7b1a263c1 515 PANTHER PTHR30536 1 515 1.7E-212 T 23-04-2016 LT40_RS11705 6f45a922eb093db2bde3d2a7b1a263c1 515 PANTHER PTHR30536:SF5 1 515 1.7E-212 T 23-04-2016 LT40_RS11705 6f45a922eb093db2bde3d2a7b1a263c1 515 SMART SM00858 19 88 1.8E-15 T 23-04-2016 IPR013974 SAF domain LT40_RS11705 6f45a922eb093db2bde3d2a7b1a263c1 515 Pfam PF08666 SAF domain 19 87 6.5E-15 T 23-04-2016 IPR013974 SAF domain LT40_RS12830 7cbd67b3ad47d253cdcb2daf9254f19f 266 PIRSF PIRSF000388 1 266 1.3E-94 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 LT40_RS12830 7cbd67b3ad47d253cdcb2daf9254f19f 266 SUPERFAMILY SSF51621 4 264 1.26E-99 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS12830 7cbd67b3ad47d253cdcb2daf9254f19f 266 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 264 40.783 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 LT40_RS12830 7cbd67b3ad47d253cdcb2daf9254f19f 266 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 259 2.9E-102 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 LT40_RS12830 7cbd67b3ad47d253cdcb2daf9254f19f 266 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 4 264 1.6E-99 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 LT40_RS12830 7cbd67b3ad47d253cdcb2daf9254f19f 266 PANTHER PTHR20881:SF3 1 265 8.3E-161 T 23-04-2016 LT40_RS12830 7cbd67b3ad47d253cdcb2daf9254f19f 266 Gene3D G3DSA:3.20.20.60 3 264 1.2E-105 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS12830 7cbd67b3ad47d253cdcb2daf9254f19f 266 PANTHER PTHR20881 1 265 8.3E-161 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 LT40_RS20885 6a1fd5a7631f1e2656c4d15e3024f274 241 SUPERFAMILY SSF46894 130 229 7.94E-12 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS20885 6a1fd5a7631f1e2656c4d15e3024f274 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 1.4E-6 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS20885 6a1fd5a7631f1e2656c4d15e3024f274 241 SMART SM00862 151 228 6.1E-5 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS20885 6a1fd5a7631f1e2656c4d15e3024f274 241 Gene3D G3DSA:1.10.10.10 138 229 4.3E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01375 af2f34c2b37aa81cc6e54972a33a5fc0 251 PIRSF PIRSF031679 3 251 5.5E-90 T 23-04-2016 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted LT40_RS01375 af2f34c2b37aa81cc6e54972a33a5fc0 251 Gene3D G3DSA:3.40.50.150 19 213 5.3E-12 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS01375 af2f34c2b37aa81cc6e54972a33a5fc0 251 Pfam PF13489 Methyltransferase domain 27 173 7.6E-7 T 23-04-2016 LT40_RS01375 af2f34c2b37aa81cc6e54972a33a5fc0 251 SUPERFAMILY SSF53335 36 220 3.45E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14300 919c5c0726d9349ed4f0a0ff415734cf 256 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 30 255 3.3E-82 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LT40_RS14300 919c5c0726d9349ed4f0a0ff415734cf 256 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 163 177 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LT40_RS14300 919c5c0726d9349ed4f0a0ff415734cf 256 Pfam PF01209 ubiE/COQ5 methyltransferase family 25 255 1.7E-97 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LT40_RS14300 919c5c0726d9349ed4f0a0ff415734cf 256 PANTHER PTHR10108 9 255 9.7E-166 T 23-04-2016 LT40_RS14300 919c5c0726d9349ed4f0a0ff415734cf 256 PANTHER PTHR10108:SF864 9 255 9.7E-166 T 23-04-2016 LT40_RS14300 919c5c0726d9349ed4f0a0ff415734cf 256 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 41 56 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LT40_RS14300 919c5c0726d9349ed4f0a0ff415734cf 256 SUPERFAMILY SSF53335 21 252 8.97E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14300 919c5c0726d9349ed4f0a0ff415734cf 256 Gene3D G3DSA:3.40.50.150 28 252 3.9E-58 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS14300 919c5c0726d9349ed4f0a0ff415734cf 256 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 21 255 38.489 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 LT40_RS19875 1c030019a6f025fe6741e276939285ca 74 Pfam PF09493 Tryptophan-rich protein (DUF2389) 15 74 3.7E-20 T 23-04-2016 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich LT40_RS19875 1c030019a6f025fe6741e276939285ca 74 TIGRFAM TIGR02450 TIGR02450: tryptophan-rich conserved hypothetical protein 13 74 1.2E-18 T 23-04-2016 IPR012663 Conserved hypothetical protein CHP02450, tryptophan-rich LT40_RS03325 5642a36a9e724d3fed9e8378c5c83406 209 PANTHER PTHR11403 12 209 1.4E-110 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 LT40_RS03325 5642a36a9e724d3fed9e8378c5c83406 209 PANTHER PTHR11403:SF2 12 209 1.4E-110 T 23-04-2016 LT40_RS03325 5642a36a9e724d3fed9e8378c5c83406 209 Pfam PF00510 Cytochrome c oxidase subunit III 20 207 1.1E-16 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 LT40_RS03325 5642a36a9e724d3fed9e8378c5c83406 209 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 30 209 7.0E-87 T 23-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 LT40_RS03325 5642a36a9e724d3fed9e8378c5c83406 209 SUPERFAMILY SSF81452 14 207 5.76E-58 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 LT40_RS03325 5642a36a9e724d3fed9e8378c5c83406 209 Gene3D G3DSA:1.20.120.80 30 207 3.1E-51 T 23-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 LT40_RS14880 072d54a4a43a3e643f9cdc837a18da5e 85 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 11 83 2.2E-27 T 23-04-2016 IPR018680 Protein of unknown function DUF2164 LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 7 58 2.2E-12 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 SMART SM00138 5 272 1.7E-94 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 PANTHER PTHR24422:SF9 5 275 7.8E-116 T 23-04-2016 LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 SUPERFAMILY SSF47757 5 72 4.18E-16 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 SUPERFAMILY SSF53335 73 266 1.21E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 PANTHER PTHR24422 5 275 7.8E-116 T 23-04-2016 LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 269 1.2E-64 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 2.6E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 2.6E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 PRINTS PR00996 Glutamate methyltransferase family signature 105 125 2.6E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 2.6E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 2.6E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 2.6E-43 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 Gene3D G3DSA:1.10.155.10 7 71 5.1E-14 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal LT40_RS02290 8d44c0fd5c82ee059e2b47381cd63d02 275 Gene3D G3DSA:3.40.50.150 72 270 2.4E-61 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS04245 7c5851a179265208f8448f62a7df37d6 388 Gene3D G3DSA:1.20.1250.20 201 380 9.0E-9 T 23-04-2016 LT40_RS04245 7c5851a179265208f8448f62a7df37d6 388 SUPERFAMILY SSF103473 4 382 2.88E-52 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04245 7c5851a179265208f8448f62a7df37d6 388 PANTHER PTHR23501:SF4 1 380 1.2E-160 T 23-04-2016 LT40_RS04245 7c5851a179265208f8448f62a7df37d6 388 PANTHER PTHR23501 1 380 1.2E-160 T 23-04-2016 LT40_RS04245 7c5851a179265208f8448f62a7df37d6 388 Pfam PF07690 Major Facilitator Superfamily 8 311 4.5E-37 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS04245 7c5851a179265208f8448f62a7df37d6 388 Gene3D G3DSA:1.20.1250.20 5 188 4.3E-30 T 23-04-2016 LT40_RS04490 61c7401ce8cfe5ecaa06eec34d3537f5 321 Pfam PF07859 alpha/beta hydrolase fold 80 290 1.6E-58 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LT40_RS04490 61c7401ce8cfe5ecaa06eec34d3537f5 321 PANTHER PTHR23024 54 313 1.1E-60 T 23-04-2016 LT40_RS04490 61c7401ce8cfe5ecaa06eec34d3537f5 321 Gene3D G3DSA:3.40.50.1820 22 313 1.7E-78 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS04490 61c7401ce8cfe5ecaa06eec34d3537f5 321 SUPERFAMILY SSF53474 47 312 7.7E-63 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS10560 98f3851516736ecc62f12b84258c8a55 415 PANTHER PTHR23522:SF1 1 399 9.6E-134 T 23-04-2016 LT40_RS10560 98f3851516736ecc62f12b84258c8a55 415 SUPERFAMILY SSF103473 8 403 3.66E-36 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS10560 98f3851516736ecc62f12b84258c8a55 415 Gene3D G3DSA:1.20.1250.20 208 403 4.8E-22 T 23-04-2016 LT40_RS10560 98f3851516736ecc62f12b84258c8a55 415 Gene3D G3DSA:1.20.1250.20 8 187 3.6E-14 T 23-04-2016 LT40_RS10560 98f3851516736ecc62f12b84258c8a55 415 Pfam PF03825 Nucleoside H+ symporter 4 401 2.9E-121 T 23-04-2016 LT40_RS10560 98f3851516736ecc62f12b84258c8a55 415 PANTHER PTHR23522 1 399 9.6E-134 T 23-04-2016 LT40_RS00235 6487c3098c9608acd6efaafe02e7f6a2 111 Pfam PF01817 Chorismate mutase type II 20 97 7.4E-16 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS00235 6487c3098c9608acd6efaafe02e7f6a2 111 Gene3D G3DSA:1.20.59.10 14 109 2.3E-17 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS00235 6487c3098c9608acd6efaafe02e7f6a2 111 SUPERFAMILY SSF48600 23 104 1.47E-19 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS00235 6487c3098c9608acd6efaafe02e7f6a2 111 SMART SM00830 20 100 4.9E-17 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 LT40_RS04190 360524797d3be8898b2f68ac7b2c1a78 365 PIRSF PIRSF028101 2 365 2.8E-141 T 23-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 LT40_RS04190 360524797d3be8898b2f68ac7b2c1a78 365 Gene3D G3DSA:2.130.10.10 63 176 9.3E-13 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LT40_RS04190 360524797d3be8898b2f68ac7b2c1a78 365 Gene3D G3DSA:2.130.10.10 270 348 9.3E-13 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LT40_RS04190 360524797d3be8898b2f68ac7b2c1a78 365 SUPERFAMILY SSF50969 53 357 6.51E-19 T 23-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like LT40_RS04190 360524797d3be8898b2f68ac7b2c1a78 365 Pfam PF07433 Protein of unknown function (DUF1513) 61 364 1.4E-109 T 23-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 LT40_RS00675 69919ab5de69382b7a5bdf050209d49f 232 SUPERFAMILY SSF56784 5 216 2.97E-58 T 23-04-2016 IPR023214 HAD-like domain LT40_RS00675 69919ab5de69382b7a5bdf050209d49f 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 186 5.2E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS00675 69919ab5de69382b7a5bdf050209d49f 232 Gene3D G3DSA:3.40.50.1000 75 217 5.7E-43 T 23-04-2016 IPR023214 HAD-like domain LT40_RS00675 69919ab5de69382b7a5bdf050209d49f 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 180 1.8E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LT40_RS00675 69919ab5de69382b7a5bdf050209d49f 232 PANTHER PTHR18901:SF40 1 219 3.4E-64 T 23-04-2016 LT40_RS00675 69919ab5de69382b7a5bdf050209d49f 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 186 1.8E-30 T 23-04-2016 IPR023214 HAD-like domain LT40_RS00675 69919ab5de69382b7a5bdf050209d49f 232 Gene3D G3DSA:1.10.150.240 23 74 5.2E-13 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 LT40_RS00675 69919ab5de69382b7a5bdf050209d49f 232 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 87 186 8.9E-13 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA LT40_RS00675 69919ab5de69382b7a5bdf050209d49f 232 PANTHER PTHR18901 1 219 3.4E-64 T 23-04-2016 LT40_RS04665 f3563567fb77e8a7699bbac16cee691b 434 SUPERFAMILY SSF103473 27 432 9.94E-57 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS04665 f3563567fb77e8a7699bbac16cee691b 434 Pfam PF00083 Sugar (and other) transporter 231 432 1.4E-13 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS04665 f3563567fb77e8a7699bbac16cee691b 434 Pfam PF00083 Sugar (and other) transporter 31 214 2.3E-16 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 LT40_RS04665 f3563567fb77e8a7699bbac16cee691b 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 139 164 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LT40_RS04665 f3563567fb77e8a7699bbac16cee691b 434 PANTHER PTHR23508 27 421 1.1E-107 T 23-04-2016 LT40_RS04665 f3563567fb77e8a7699bbac16cee691b 434 Gene3D G3DSA:1.20.1250.20 259 429 1.1E-18 T 23-04-2016 LT40_RS04665 f3563567fb77e8a7699bbac16cee691b 434 Gene3D G3DSA:1.20.1250.20 27 223 2.1E-16 T 23-04-2016 LT40_RS04665 f3563567fb77e8a7699bbac16cee691b 434 PANTHER PTHR23508:SF11 27 421 1.1E-107 T 23-04-2016 LT40_RS18515 04db7ceed988f43c4520e20ffab35cd3 294 Gene3D G3DSA:3.40.50.720 3 230 1.0E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18515 04db7ceed988f43c4520e20ffab35cd3 294 Pfam PF04321 RmlD substrate binding domain 3 290 2.5E-69 T 23-04-2016 IPR029903 RmlD-like substrate binding domain LT40_RS18515 04db7ceed988f43c4520e20ffab35cd3 294 SUPERFAMILY SSF51735 3 291 1.62E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18515 04db7ceed988f43c4520e20ffab35cd3 294 PANTHER PTHR10491:SF4 1 290 1.3E-49 T 23-04-2016 LT40_RS18515 04db7ceed988f43c4520e20ffab35cd3 294 PANTHER PTHR10491 1 290 1.3E-49 T 23-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family LT40_RS18540 50141f2de687101de1dbac8aad6e539b 239 PANTHER PTHR24220:SF578 7 224 6.2E-77 T 23-04-2016 LT40_RS18540 50141f2de687101de1dbac8aad6e539b 239 Pfam PF00005 ABC transporter 26 180 8.4E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS18540 50141f2de687101de1dbac8aad6e539b 239 SUPERFAMILY SSF52540 5 224 9.26E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18540 50141f2de687101de1dbac8aad6e539b 239 PANTHER PTHR24220 7 224 6.2E-77 T 23-04-2016 LT40_RS18540 50141f2de687101de1dbac8aad6e539b 239 Gene3D G3DSA:3.40.50.300 4 224 3.9E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS18540 50141f2de687101de1dbac8aad6e539b 239 SMART SM00382 31 229 2.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10335 cf8bad9e80b0ef645fcab34908a11b3a 119 Pfam PF04234 CopC domain 22 117 5.2E-22 T 23-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 LT40_RS10335 cf8bad9e80b0ef645fcab34908a11b3a 119 Gene3D G3DSA:2.60.40.1220 21 117 2.0E-27 T 23-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like LT40_RS10335 cf8bad9e80b0ef645fcab34908a11b3a 119 SUPERFAMILY SSF81296 21 117 4.06E-25 T 23-04-2016 IPR014756 Immunoglobulin E-set LT40_RS05100 b3c3c338b72b8a6a4be05ac80321b38e 300 PANTHER PTHR30465:SF10 18 298 1.6E-79 T 23-04-2016 LT40_RS05100 b3c3c338b72b8a6a4be05ac80321b38e 300 SUPERFAMILY SSF161098 99 285 5.36E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05100 b3c3c338b72b8a6a4be05ac80321b38e 300 PANTHER PTHR30465 18 298 1.6E-79 T 23-04-2016 LT40_RS05100 b3c3c338b72b8a6a4be05ac80321b38e 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 293 6.3E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05100 b3c3c338b72b8a6a4be05ac80321b38e 300 Gene3D G3DSA:1.10.3720.10 97 297 1.8E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS10820 6cc884a3b155df36996bdbacbaa79147 254 Gene3D G3DSA:3.40.190.10 116 214 4.2E-37 T 23-04-2016 LT40_RS10820 6cc884a3b155df36996bdbacbaa79147 254 PIRSF PIRSF004846 2 254 7.4E-55 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 LT40_RS10820 6cc884a3b155df36996bdbacbaa79147 254 Gene3D G3DSA:3.40.190.10 10 115 1.5E-9 T 23-04-2016 LT40_RS10820 6cc884a3b155df36996bdbacbaa79147 254 Gene3D G3DSA:3.40.190.10 216 253 1.5E-9 T 23-04-2016 LT40_RS10820 6cc884a3b155df36996bdbacbaa79147 254 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 251 2.0E-76 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 LT40_RS10820 6cc884a3b155df36996bdbacbaa79147 254 Pfam PF13531 Bacterial extracellular solute-binding protein 30 253 5.9E-45 T 23-04-2016 LT40_RS10820 6cc884a3b155df36996bdbacbaa79147 254 SUPERFAMILY SSF53850 28 252 4.27E-60 T 23-04-2016 LT40_RS10820 6cc884a3b155df36996bdbacbaa79147 254 PANTHER PTHR30632 12 253 1.8E-44 T 23-04-2016 LT40_RS10125 7165d349458baa5a47b25b038a0ac08c 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 5.1E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS10125 7165d349458baa5a47b25b038a0ac08c 246 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 5.1E-8 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS10125 7165d349458baa5a47b25b038a0ac08c 246 SUPERFAMILY SSF46785 13 85 4.21E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10125 7165d349458baa5a47b25b038a0ac08c 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 81 1.8E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS10125 7165d349458baa5a47b25b038a0ac08c 246 SMART SM00345 22 81 6.5E-21 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LT40_RS10125 7165d349458baa5a47b25b038a0ac08c 246 SMART SM00895 105 232 2.0E-18 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS10125 7165d349458baa5a47b25b038a0ac08c 246 SUPERFAMILY SSF48008 101 240 1.52E-24 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS10125 7165d349458baa5a47b25b038a0ac08c 246 PANTHER PTHR11751 20 121 1.7E-22 T 23-04-2016 LT40_RS10125 7165d349458baa5a47b25b038a0ac08c 246 Gene3D G3DSA:1.10.10.10 14 83 9.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10125 7165d349458baa5a47b25b038a0ac08c 246 Pfam PF07729 FCD domain 106 231 7.4E-20 T 23-04-2016 IPR011711 GntR, C-terminal LT40_RS10125 7165d349458baa5a47b25b038a0ac08c 246 Gene3D G3DSA:1.20.120.530 99 242 8.4E-29 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal LT40_RS16665 286a91e75cf2916939b8468657b329f0 428 PANTHER PTHR13847:SF190 8 395 2.3E-151 T 23-04-2016 LT40_RS16665 286a91e75cf2916939b8468657b329f0 428 PANTHER PTHR13847 8 395 2.3E-151 T 23-04-2016 LT40_RS16665 286a91e75cf2916939b8468657b329f0 428 SUPERFAMILY SSF51905 345 391 8.63E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16665 286a91e75cf2916939b8468657b329f0 428 SUPERFAMILY SSF51905 29 254 8.63E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16665 286a91e75cf2916939b8468657b329f0 428 Pfam PF01266 FAD dependent oxidoreductase 30 381 4.9E-53 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS16665 286a91e75cf2916939b8468657b329f0 428 Gene3D G3DSA:3.50.50.60 345 389 3.5E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16665 286a91e75cf2916939b8468657b329f0 428 Gene3D G3DSA:3.50.50.60 21 119 3.5E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16665 286a91e75cf2916939b8468657b329f0 428 Gene3D G3DSA:3.50.50.60 172 252 3.5E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10260 4ba8744a8d6bc910079705c91a140c17 143 PIRSF PIRSF008546 1 141 1.1E-58 T 23-04-2016 IPR014937 Protein of unknown function DUF1810 LT40_RS10260 4ba8744a8d6bc910079705c91a140c17 143 Pfam PF08837 Protein of unknown function (DUF1810) 5 139 1.0E-58 T 23-04-2016 IPR014937 Protein of unknown function DUF1810 LT40_RS10260 4ba8744a8d6bc910079705c91a140c17 143 SUPERFAMILY SSF140736 3 140 6.93E-58 T 23-04-2016 LT40_RS10260 4ba8744a8d6bc910079705c91a140c17 143 PANTHER PTHR41377 1 141 2.0E-53 T 23-04-2016 LT40_RS10260 4ba8744a8d6bc910079705c91a140c17 143 PANTHER PTHR41377:SF1 1 141 2.0E-53 T 23-04-2016 LT40_RS20960 2ba1462064eb9d6475f1cab6765a2677 367 SUPERFAMILY SSF55729 12 176 2.84E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS20960 2ba1462064eb9d6475f1cab6765a2677 367 Pfam PF13302 Acetyltransferase (GNAT) domain 212 333 3.3E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS20960 2ba1462064eb9d6475f1cab6765a2677 367 Gene3D G3DSA:3.40.630.30 182 362 4.4E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS20960 2ba1462064eb9d6475f1cab6765a2677 367 PANTHER PTHR23091 8 205 4.4E-14 T 23-04-2016 LT40_RS20960 2ba1462064eb9d6475f1cab6765a2677 367 Pfam PF00583 Acetyltransferase (GNAT) family 75 155 1.3E-9 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS20960 2ba1462064eb9d6475f1cab6765a2677 367 Gene3D G3DSA:3.40.630.30 11 179 5.3E-36 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS20960 2ba1462064eb9d6475f1cab6765a2677 367 SUPERFAMILY SSF55729 187 340 6.38E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS07160 6999426bc799661466e5b53501727e3e 142 SUPERFAMILY SSF53474 1 128 5.71E-12 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS07160 6999426bc799661466e5b53501727e3e 142 Gene3D G3DSA:3.40.50.1820 1 130 1.1E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS15260 f4878b80f19af74c3ffd3c84d4f14ede 159 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LT40_RS15260 f4878b80f19af74c3ffd3c84d4f14ede 159 Pfam PF00293 NUDIX domain 7 146 4.2E-26 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 LT40_RS15260 f4878b80f19af74c3ffd3c84d4f14ede 159 Gene3D G3DSA:3.90.79.10 3 151 1.4E-30 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS15260 f4878b80f19af74c3ffd3c84d4f14ede 159 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.5E-6 T 23-04-2016 IPR020476 NUDIX hydrolase LT40_RS15260 f4878b80f19af74c3ffd3c84d4f14ede 159 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.5E-6 T 23-04-2016 IPR020476 NUDIX hydrolase LT40_RS15260 f4878b80f19af74c3ffd3c84d4f14ede 159 PANTHER PTHR23114 1 152 1.7E-52 T 23-04-2016 LT40_RS15260 f4878b80f19af74c3ffd3c84d4f14ede 159 SUPERFAMILY SSF55811 4 156 4.6E-32 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 LT40_RS15260 f4878b80f19af74c3ffd3c84d4f14ede 159 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.424 T 23-04-2016 IPR022927 RNA pyrophosphohydrolase RppH LT40_RS02430 2fd65dcd68a0d8276b5f972437cdd384 105 PANTHER PTHR33495 1 105 2.0E-14 T 23-04-2016 LT40_RS02430 2fd65dcd68a0d8276b5f972437cdd384 105 PANTHER PTHR33495:SF3 1 105 2.0E-14 T 23-04-2016 LT40_RS02430 2fd65dcd68a0d8276b5f972437cdd384 105 Pfam PF13466 STAS domain 22 99 1.1E-11 T 23-04-2016 IPR002645 STAS domain LT40_RS02430 2fd65dcd68a0d8276b5f972437cdd384 105 SUPERFAMILY SSF52091 10 104 4.12E-22 T 23-04-2016 IPR002645 STAS domain LT40_RS02430 2fd65dcd68a0d8276b5f972437cdd384 105 Gene3D G3DSA:3.30.750.24 11 104 6.2E-21 T 23-04-2016 IPR002645 STAS domain LT40_RS09290 29eaa747cd22948852b941337610951d 151 PANTHER PTHR36966 9 151 1.2E-25 T 23-04-2016 LT40_RS09290 29eaa747cd22948852b941337610951d 151 PANTHER PTHR36966:SF1 9 151 1.2E-25 T 23-04-2016 LT40_RS09290 29eaa747cd22948852b941337610951d 151 Gene3D G3DSA:3.30.70.1290 5 133 5.6E-17 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LT40_RS09290 29eaa747cd22948852b941337610951d 151 SMART SM01321 16 130 3.7E-31 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LT40_RS09290 29eaa747cd22948852b941337610951d 151 Pfam PF01797 Transposase IS200 like 23 129 1.3E-14 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LT40_RS09290 29eaa747cd22948852b941337610951d 151 SUPERFAMILY SSF143422 9 136 4.97E-29 T 23-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LT40_RS19950 9710a490d32625b8558d23f358a2ceea 86 Pfam PF09413 Putative prokaryotic signal transducing protein 1 66 4.5E-8 T 23-04-2016 IPR018551 Domain of unknown function DUF2007 LT40_RS19955 c60fbe28afe5da7fb93f47d47cbf4cb2 206 Pfam PF02586 SOS response associated peptidase (SRAP) 1 194 4.8E-39 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS19955 c60fbe28afe5da7fb93f47d47cbf4cb2 206 PANTHER PTHR13604 2 205 1.9E-38 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS19955 c60fbe28afe5da7fb93f47d47cbf4cb2 206 Gene3D G3DSA:3.90.1680.10 1 205 1.5E-44 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS19955 c60fbe28afe5da7fb93f47d47cbf4cb2 206 SUPERFAMILY SSF143081 2 201 4.32E-46 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS00290 ec877d82a3be79d067fe8fc54af68d3d 132 SUPERFAMILY SSF54427 8 124 1.42E-18 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS00290 ec877d82a3be79d067fe8fc54af68d3d 132 Gene3D G3DSA:3.10.450.50 4 123 7.6E-12 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS00290 ec877d82a3be79d067fe8fc54af68d3d 132 Pfam PF12680 SnoaL-like domain 12 113 3.0E-6 T 23-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain LT40_RS04590 b08eb99aa2681b17d896f5676c9e1155 84 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 3.3E-23 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase LT40_RS04590 b08eb99aa2681b17d896f5676c9e1155 84 PANTHER PTHR39585 2 83 3.2E-30 T 23-04-2016 LT40_RS04590 b08eb99aa2681b17d896f5676c9e1155 84 SUPERFAMILY SSF109910 2 79 8.76E-24 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase LT40_RS04590 b08eb99aa2681b17d896f5676c9e1155 84 PANTHER PTHR39585:SF1 2 83 3.2E-30 T 23-04-2016 LT40_RS04590 b08eb99aa2681b17d896f5676c9e1155 84 Gene3D G3DSA:1.10.150.250 3 83 3.8E-27 T 23-04-2016 IPR005631 Flavinator of succinate dehydrogenase LT40_RS17810 198ec74f86b92a4dc54bb41d45305e33 270 Gene3D G3DSA:3.20.20.100 11 263 1.4E-41 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS17810 198ec74f86b92a4dc54bb41d45305e33 270 PANTHER PTHR11732 10 263 2.3E-52 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS17810 198ec74f86b92a4dc54bb41d45305e33 270 Pfam PF00248 Aldo/keto reductase family 22 219 6.7E-31 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS17810 198ec74f86b92a4dc54bb41d45305e33 270 PRINTS PR00069 Aldo-keto reductase signature 153 170 7.1E-5 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS17810 198ec74f86b92a4dc54bb41d45305e33 270 PRINTS PR00069 Aldo-keto reductase signature 119 137 7.1E-5 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS17810 198ec74f86b92a4dc54bb41d45305e33 270 PRINTS PR00069 Aldo-keto reductase signature 57 81 7.1E-5 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LT40_RS17810 198ec74f86b92a4dc54bb41d45305e33 270 PANTHER PTHR11732:SF14 10 263 2.3E-52 T 23-04-2016 LT40_RS17810 198ec74f86b92a4dc54bb41d45305e33 270 SUPERFAMILY SSF51430 10 263 3.8E-48 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS17505 47a30ebd26410a2af4d4ab9fb1f5ce2d 325 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 6 320 5.9E-94 T 23-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 LT40_RS17505 47a30ebd26410a2af4d4ab9fb1f5ce2d 325 PANTHER PTHR10443 9 251 1.6E-176 T 23-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 LT40_RS17505 47a30ebd26410a2af4d4ab9fb1f5ce2d 325 PANTHER PTHR10443 276 323 1.6E-176 T 23-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 LT40_RS17505 47a30ebd26410a2af4d4ab9fb1f5ce2d 325 PANTHER PTHR10443:SF24 9 251 1.6E-176 T 23-04-2016 LT40_RS17505 47a30ebd26410a2af4d4ab9fb1f5ce2d 325 PANTHER PTHR10443:SF24 276 323 1.6E-176 T 23-04-2016 LT40_RS17505 47a30ebd26410a2af4d4ab9fb1f5ce2d 325 SUPERFAMILY SSF51556 9 324 3.02E-79 T 23-04-2016 IPR032466 Metal-dependent hydrolase LT40_RS17505 47a30ebd26410a2af4d4ab9fb1f5ce2d 325 Gene3D G3DSA:3.20.20.140 5 324 5.2E-94 T 23-04-2016 LT40_RS07870 609512ec5670229acbd174a85359cfbb 502 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 4.5E-152 T 23-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane LT40_RS07870 609512ec5670229acbd174a85359cfbb 502 PANTHER PTHR35342 2 502 4.3E-278 T 23-04-2016 LT40_RS07870 609512ec5670229acbd174a85359cfbb 502 PANTHER PTHR35342:SF2 2 502 4.3E-278 T 23-04-2016 LT40_RS19465 1d98c128e66c2dcbf029d850600ff0e5 315 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 285 6.1E-98 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 LT40_RS19465 1d98c128e66c2dcbf029d850600ff0e5 315 Pfam PF02401 LytB protein 3 283 3.0E-93 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 LT40_RS19465 1d98c128e66c2dcbf029d850600ff0e5 315 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 287 37.933 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 LT40_RS19465 1d98c128e66c2dcbf029d850600ff0e5 315 PANTHER PTHR30426 1 311 2.5E-159 T 23-04-2016 LT40_RS18335 8a65b7c14488bb8fd023c455cae276ce 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.3E-68 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 LT40_RS18335 8a65b7c14488bb8fd023c455cae276ce 156 Gene3D G3DSA:1.10.455.10 8 156 1.6E-66 T 23-04-2016 IPR023798 Ribosomal protein S7 domain LT40_RS18335 8a65b7c14488bb8fd023c455cae276ce 156 PANTHER PTHR11205 1 156 1.2E-89 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 LT40_RS18335 8a65b7c14488bb8fd023c455cae276ce 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 LT40_RS18335 8a65b7c14488bb8fd023c455cae276ce 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.585 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 LT40_RS18335 8a65b7c14488bb8fd023c455cae276ce 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.0E-67 T 23-04-2016 IPR023798 Ribosomal protein S7 domain LT40_RS18335 8a65b7c14488bb8fd023c455cae276ce 156 PIRSF PIRSF002122 2 156 2.0E-60 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 LT40_RS18335 8a65b7c14488bb8fd023c455cae276ce 156 SUPERFAMILY SSF47973 6 149 1.1E-60 T 23-04-2016 IPR023798 Ribosomal protein S7 domain LT40_RS09315 75988f0460cde2368c71611f2df3bd37 280 PANTHER PTHR31632 2 265 1.8E-88 T 23-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 LT40_RS09315 75988f0460cde2368c71611f2df3bd37 280 Pfam PF03239 Iron permease FTR1 family 2 259 5.2E-52 T 23-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 LT40_RS10505 833694e08bce40b0794fe693fdf2ec5e 110 PANTHER PTHR11908 67 110 8.3E-17 T 23-04-2016 LT40_RS10505 833694e08bce40b0794fe693fdf2ec5e 110 Gene3D G3DSA:3.30.365.10 18 59 1.7E-14 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS10505 833694e08bce40b0794fe693fdf2ec5e 110 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 18 89 7.2E-12 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS10505 833694e08bce40b0794fe693fdf2ec5e 110 SUPERFAMILY SSF56003 17 109 1.99E-27 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS10505 833694e08bce40b0794fe693fdf2ec5e 110 PANTHER PTHR11908:SF71 67 110 8.3E-17 T 23-04-2016 LT40_RS10505 833694e08bce40b0794fe693fdf2ec5e 110 Gene3D G3DSA:3.30.365.10 60 109 3.1E-14 T 23-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 LT40_RS13565 871ac24b35fd99dcbee60f3a4592847a 279 Pfam PF01774 UreD urease accessory protein 57 252 3.6E-48 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 LT40_RS13565 871ac24b35fd99dcbee60f3a4592847a 279 PANTHER PTHR33643:SF1 1 276 8.4E-50 T 23-04-2016 LT40_RS13565 871ac24b35fd99dcbee60f3a4592847a 279 Hamap MF_01384 Urease accessory protein UreD [ureD]. 14 263 28.606 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 LT40_RS13565 871ac24b35fd99dcbee60f3a4592847a 279 PANTHER PTHR33643 1 276 8.4E-50 T 23-04-2016 LT40_RS10255 e954fcb86dc3b3dbdb2769ebe1b9110f 394 PANTHER PTHR23517:SF4 1 394 1.3E-107 T 23-04-2016 LT40_RS10255 e954fcb86dc3b3dbdb2769ebe1b9110f 394 Gene3D G3DSA:1.20.1250.20 18 199 3.9E-18 T 23-04-2016 LT40_RS10255 e954fcb86dc3b3dbdb2769ebe1b9110f 394 Gene3D G3DSA:1.20.1250.20 223 391 4.8E-15 T 23-04-2016 LT40_RS10255 e954fcb86dc3b3dbdb2769ebe1b9110f 394 PANTHER PTHR23517 1 394 1.3E-107 T 23-04-2016 LT40_RS10255 e954fcb86dc3b3dbdb2769ebe1b9110f 394 Pfam PF07690 Major Facilitator Superfamily 22 267 6.8E-14 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS10255 e954fcb86dc3b3dbdb2769ebe1b9110f 394 SUPERFAMILY SSF103473 18 392 3.92E-44 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS03365 d85271fd2a5750ee839af426120a8ee6 258 Pfam PF10014 2OG-Fe dioxygenase 64 254 8.0E-59 T 23-04-2016 IPR018724 2OG-Fe dioxygenase LT40_RS19080 905277dec86ffa78126c0bdef770dc23 127 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 127 40.883 T 23-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC LT40_RS19080 905277dec86ffa78126c0bdef770dc23 127 PANTHER PTHR11803 1 127 6.0E-30 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS19080 905277dec86ffa78126c0bdef770dc23 127 Gene3D G3DSA:3.30.1330.40 1 127 3.8E-32 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS19080 905277dec86ffa78126c0bdef770dc23 127 Pfam PF01042 Endoribonuclease L-PSP 13 125 7.8E-29 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS19080 905277dec86ffa78126c0bdef770dc23 127 SUPERFAMILY SSF55298 2 127 3.3E-34 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS19080 905277dec86ffa78126c0bdef770dc23 127 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 3.1E-75 T 23-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC LT40_RS05975 5ce34d84058f0cac21f0a2aba6966cd1 347 Pfam PF01594 Domain of unknown function DUF20 10 339 1.7E-45 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like LT40_RS05975 5ce34d84058f0cac21f0a2aba6966cd1 347 PANTHER PTHR21716 4 346 3.4E-121 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like LT40_RS05975 5ce34d84058f0cac21f0a2aba6966cd1 347 PANTHER PTHR21716:SF20 4 346 3.4E-121 T 23-04-2016 LT40_RS10755 64ea57fbc97ac7622d8f2905fa55ba23 110 Gene3D G3DSA:1.10.260.40 7 48 4.5E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS10755 64ea57fbc97ac7622d8f2905fa55ba23 110 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 6 55 1.0E-9 T 23-04-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 LT40_RS11355 a390fd2e1b9051c42b443c0176f67163 137 PANTHER PTHR11058:SF5 1 127 3.3E-64 T 23-04-2016 LT40_RS11355 a390fd2e1b9051c42b443c0176f67163 137 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 123 6.1E-33 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 LT40_RS11355 a390fd2e1b9051c42b443c0176f67163 137 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.962 T 23-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 LT40_RS11355 a390fd2e1b9051c42b443c0176f67163 137 PANTHER PTHR11058 1 127 3.3E-64 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 LT40_RS07050 53ef7e34085e3fde240e2bc3033d3a5d 299 PANTHER PTHR12715:SF7 9 298 2.9E-98 T 23-04-2016 LT40_RS07050 53ef7e34085e3fde240e2bc3033d3a5d 299 PANTHER PTHR12715 9 298 2.9E-98 T 23-04-2016 LT40_RS07050 53ef7e34085e3fde240e2bc3033d3a5d 299 Pfam PF00892 EamA-like transporter family 161 287 2.9E-7 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS07050 53ef7e34085e3fde240e2bc3033d3a5d 299 SUPERFAMILY SSF103481 49 143 2.35E-6 T 23-04-2016 LT40_RS07050 53ef7e34085e3fde240e2bc3033d3a5d 299 SUPERFAMILY SSF103481 193 292 1.7E-7 T 23-04-2016 LT40_RS14070 d314f4747d80f09356d85e1fa6826325 438 Gene3D G3DSA:3.20.20.30 347 433 6.7E-140 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS14070 d314f4747d80f09356d85e1fa6826325 438 Gene3D G3DSA:3.20.20.30 2 307 6.7E-140 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS14070 d314f4747d80f09356d85e1fa6826325 438 PANTHER PTHR30011:SF18 1 438 1.3E-207 T 23-04-2016 LT40_RS14070 d314f4747d80f09356d85e1fa6826325 438 SUPERFAMILY SSF51679 4 433 3.27E-137 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS14070 d314f4747d80f09356d85e1fa6826325 438 PIRSF PIRSF000337 2 438 3.9E-163 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LT40_RS14070 d314f4747d80f09356d85e1fa6826325 438 PANTHER PTHR30011 1 438 1.3E-207 T 23-04-2016 LT40_RS14070 d314f4747d80f09356d85e1fa6826325 438 Pfam PF00296 Luciferase-like monooxygenase 16 384 3.2E-69 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 LT40_RS14070 d314f4747d80f09356d85e1fa6826325 438 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 8 429 1.1E-177 T 23-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 LT40_RS11310 379f1a815c44862604d339df246ad95b 742 SUPERFAMILY SSF53659 4 741 0.0 T 23-04-2016 LT40_RS11310 379f1a815c44862604d339df246ad95b 742 PIRSF PIRSF009407 1 742 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 LT40_RS11310 379f1a815c44862604d339df246ad95b 742 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 4 741 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 LT40_RS11310 379f1a815c44862604d339df246ad95b 742 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 LT40_RS11310 379f1a815c44862604d339df246ad95b 742 Gene3D G3DSA:3.40.718.10 340 363 4.1E-37 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LT40_RS11310 379f1a815c44862604d339df246ad95b 742 Gene3D G3DSA:3.40.718.10 539 646 4.1E-37 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LT40_RS11310 379f1a815c44862604d339df246ad95b 742 Gene3D G3DSA:3.40.718.10 147 285 4.1E-37 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 LT40_RS11310 379f1a815c44862604d339df246ad95b 742 PANTHER PTHR36999 1 742 0.0 T 23-04-2016 LT40_RS01365 c6c9a05b05511dab7cca4f2ce1f90570 229 PANTHER PTHR11941:SF50 1 225 3.1E-118 T 23-04-2016 LT40_RS01365 c6c9a05b05511dab7cca4f2ce1f90570 229 Gene3D G3DSA:3.90.226.10 2 221 4.4E-38 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS01365 c6c9a05b05511dab7cca4f2ce1f90570 229 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 224 1.8E-31 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LT40_RS01365 c6c9a05b05511dab7cca4f2ce1f90570 229 PANTHER PTHR11941 1 225 3.1E-118 T 23-04-2016 LT40_RS01365 c6c9a05b05511dab7cca4f2ce1f90570 229 SUPERFAMILY SSF52096 3 224 1.24E-46 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 Gene3D G3DSA:3.40.50.300 358 516 1.9E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 Pfam PF00005 ABC transporter 356 483 8.2E-17 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 Pfam PF00005 ABC transporter 25 171 1.7E-17 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 SUPERFAMILY SSF52540 18 222 8.13E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 SUPERFAMILY SSF52540 353 515 5.17E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 SMART SM00382 30 216 4.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 SMART SM00382 362 529 3.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 Gene3D G3DSA:3.40.50.300 7 259 1.1E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 PANTHER PTHR19211 314 519 2.7E-147 T 23-04-2016 LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 PANTHER PTHR19211 6 297 2.7E-147 T 23-04-2016 LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 PANTHER PTHR19211:SF6 314 519 2.7E-147 T 23-04-2016 LT40_RS13075 d0ed5017f5a4b47b5362159f0f5d81eb 533 PANTHER PTHR19211:SF6 6 297 2.7E-147 T 23-04-2016 LT40_RS12230 053c20bf23caa3c9f81f145a9b6c5510 125 Pfam PF13560 Helix-turn-helix domain 4 51 1.1E-7 T 23-04-2016 LT40_RS12230 053c20bf23caa3c9f81f145a9b6c5510 125 Gene3D G3DSA:1.10.260.40 4 61 5.3E-11 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS12230 053c20bf23caa3c9f81f145a9b6c5510 125 SMART SM00530 7 61 1.5E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS12230 053c20bf23caa3c9f81f145a9b6c5510 125 SUPERFAMILY SSF47413 2 59 5.36E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS00990 0ec50b9d179ada652807a22063bafb13 185 Pfam PF02674 Colicin V production protein 6 143 4.8E-35 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 LT40_RS00990 0ec50b9d179ada652807a22063bafb13 185 PANTHER PTHR36926:SF1 2 162 1.3E-69 T 23-04-2016 LT40_RS00990 0ec50b9d179ada652807a22063bafb13 185 PANTHER PTHR36926 2 162 1.3E-69 T 23-04-2016 LT40_RS01670 99a611fd7a190b75a4fe69133843b326 215 SUPERFAMILY SSF50494 29 166 4.79E-11 T 23-04-2016 IPR009003 Peptidase S1, PA clan LT40_RS01670 99a611fd7a190b75a4fe69133843b326 215 Gene3D G3DSA:2.40.10.10 92 169 4.4E-7 T 23-04-2016 LT40_RS16840 f7f25ad6945aebb1fefb40b99e53ab95 500 Pfam PF02541 Ppx/GppA phosphatase family 26 309 6.0E-73 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 LT40_RS16840 f7f25ad6945aebb1fefb40b99e53ab95 500 PIRSF PIRSF001267 2 500 1.5E-195 T 23-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 LT40_RS16840 f7f25ad6945aebb1fefb40b99e53ab95 500 Gene3D G3DSA:3.30.420.40 4 132 1.5E-45 T 23-04-2016 LT40_RS16840 f7f25ad6945aebb1fefb40b99e53ab95 500 SUPERFAMILY SSF109604 313 499 2.35E-52 T 23-04-2016 LT40_RS16840 f7f25ad6945aebb1fefb40b99e53ab95 500 SUPERFAMILY SSF53067 137 311 2.51E-43 T 23-04-2016 LT40_RS16840 f7f25ad6945aebb1fefb40b99e53ab95 500 PANTHER PTHR30005:SF4 3 500 5.0E-204 T 23-04-2016 LT40_RS16840 f7f25ad6945aebb1fefb40b99e53ab95 500 SUPERFAMILY SSF53067 12 132 2.85E-36 T 23-04-2016 LT40_RS16840 f7f25ad6945aebb1fefb40b99e53ab95 500 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 12 306 8.2E-98 T 23-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 LT40_RS16840 f7f25ad6945aebb1fefb40b99e53ab95 500 Gene3D G3DSA:3.30.420.150 135 311 1.5E-51 T 23-04-2016 LT40_RS16840 f7f25ad6945aebb1fefb40b99e53ab95 500 PANTHER PTHR30005 3 500 5.0E-204 T 23-04-2016 LT40_RS00610 41b577008d4b285cd32485f81b841199 120 PANTHER PTHR34299 1 120 7.0E-37 T 23-04-2016 LT40_RS00610 41b577008d4b285cd32485f81b841199 120 PANTHER PTHR34299:SF1 1 120 7.0E-37 T 23-04-2016 LT40_RS00610 41b577008d4b285cd32485f81b841199 120 Pfam PF01219 Prokaryotic diacylglycerol kinase 18 119 2.0E-33 T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 LT40_RS00610 41b577008d4b285cd32485f81b841199 120 Gene3D G3DSA:1.10.3830.10 5 120 2.7E-43 T 23-04-2016 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 Gene3D G3DSA:3.30.9.10 119 169 1.9E-4 T 23-04-2016 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 Gene3D G3DSA:3.30.9.10 248 340 1.9E-4 T 23-04-2016 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 Pfam PF01266 FAD dependent oxidoreductase 25 376 1.5E-58 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 SUPERFAMILY SSF51905 341 396 1.49E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 SUPERFAMILY SSF51905 23 249 1.49E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 PANTHER PTHR13847:SF190 2 406 1.6E-102 T 23-04-2016 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 PANTHER PTHR13847 2 406 1.6E-102 T 23-04-2016 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 Gene3D G3DSA:3.50.50.60 13 114 3.4E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 Gene3D G3DSA:3.50.50.60 170 247 3.4E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 Gene3D G3DSA:3.50.50.60 341 386 3.4E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 25 47 1.4E-6 T 23-04-2016 LT40_RS15135 9fbcc2b0af6bcb9bb7cd15806d04b000 422 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 305 1.4E-6 T 23-04-2016 LT40_RS03495 f72e52303d15c590d6c854695c8f18bd 128 SUPERFAMILY SSF82649 1 125 4.97E-48 T 23-04-2016 LT40_RS03495 f72e52303d15c590d6c854695c8f18bd 128 PANTHER PTHR10093:SF3 1 128 4.6E-99 T 23-04-2016 LT40_RS03495 f72e52303d15c590d6c854695c8f18bd 128 Pfam PF01592 NifU-like N terminal domain 2 125 2.7E-57 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 LT40_RS03495 f72e52303d15c590d6c854695c8f18bd 128 Gene3D G3DSA:3.90.1010.10 2 125 5.8E-56 T 23-04-2016 LT40_RS03495 f72e52303d15c590d6c854695c8f18bd 128 PANTHER PTHR10093 1 128 4.6E-99 T 23-04-2016 LT40_RS03495 f72e52303d15c590d6c854695c8f18bd 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.6E-69 T 23-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 LT40_RS17930 ba587e2984804bec4a8595229a78b485 510 Pfam PF01943 Polysaccharide biosynthesis protein 8 293 1.7E-13 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 LT40_RS17930 ba587e2984804bec4a8595229a78b485 510 PANTHER PTHR30250 1 503 7.8E-26 T 23-04-2016 LT40_RS18365 4d5db01f8d04b48d1a46274d65e0e7f9 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 21.851 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 LT40_RS18365 4d5db01f8d04b48d1a46274d65e0e7f9 99 Gene3D G3DSA:3.30.70.330 5 96 8.0E-32 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 LT40_RS18365 4d5db01f8d04b48d1a46274d65e0e7f9 99 SUPERFAMILY SSF54189 1 91 3.6E-29 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18365 4d5db01f8d04b48d1a46274d65e0e7f9 99 Pfam PF00276 Ribosomal protein L23 8 94 7.1E-30 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 LT40_RS18365 4d5db01f8d04b48d1a46274d65e0e7f9 99 PANTHER PTHR11620 7 94 6.6E-28 T 23-04-2016 LT40_RS08505 907eb23224c543c2ea8806727db5ede7 183 SUPERFAMILY SSF117856 33 175 1.62E-11 T 23-04-2016 LT40_RS08505 907eb23224c543c2ea8806727db5ede7 183 Gene3D G3DSA:3.30.1330.80 44 178 8.9E-11 T 23-04-2016 LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PANTHER PTHR24322 214 336 2.6E-60 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PANTHER PTHR24322 352 384 2.6E-60 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 326 342 3.3E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 352 371 3.3E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 406 426 3.3E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 279 290 3.3E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 373 390 3.3E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 228 3.3E-34 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PANTHER PTHR24322:SF438 214 336 2.6E-60 T 23-04-2016 LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PANTHER PTHR24322:SF438 352 384 2.6E-60 T 23-04-2016 LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 332 340 6.4E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 352 371 6.4E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 279 290 6.4E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 216 440 1.6E-50 T 23-04-2016 LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 Gene3D G3DSA:3.40.50.720 204 442 1.2E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 339 367 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 210 388 4.3E-7 T 23-04-2016 LT40_RS13355 3b823e0f4a1868f1c06de047333cd016 446 SUPERFAMILY SSF51735 206 442 9.07E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS00945 a8acba759886cc6aaee993bc06013519 1424 Gene3D G3DSA:1.20.1270.130 1129 1206 9.3E-12 T 23-04-2016 LT40_RS00945 a8acba759886cc6aaee993bc06013519 1424 Gene3D G3DSA:1.20.58.360 1210 1346 4.5E-36 T 23-04-2016 LT40_RS00945 a8acba759886cc6aaee993bc06013519 1424 SUPERFAMILY SSF52058 916 1071 1.25E-19 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LT40_RS00945 a8acba759886cc6aaee993bc06013519 1424 Gene3D G3DSA:3.80.10.10 916 1071 2.6E-22 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LT40_RS00945 a8acba759886cc6aaee993bc06013519 1424 PANTHER PTHR23155 956 1075 3.5E-14 T 23-04-2016 LT40_RS00945 a8acba759886cc6aaee993bc06013519 1424 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 1132 1351 1.3E-56 T 23-04-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- LT40_RS00945 a8acba759886cc6aaee993bc06013519 1424 SMART SM00369 1008 1031 59.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype LT40_RS00945 a8acba759886cc6aaee993bc06013519 1424 SMART SM00369 959 982 15.0 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype LT40_RS00945 a8acba759886cc6aaee993bc06013519 1424 SMART SM00369 1053 1076 0.32 T 23-04-2016 IPR003591 Leucine-rich repeat, typical subtype LT40_RS08950 91ae2bc327d0870386663e4a099e33a1 615 PANTHER PTHR30290:SF2 386 606 7.6E-166 T 23-04-2016 LT40_RS08950 91ae2bc327d0870386663e4a099e33a1 615 PANTHER PTHR30290:SF2 1 361 7.6E-166 T 23-04-2016 LT40_RS08950 91ae2bc327d0870386663e4a099e33a1 615 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 102 508 2.5E-69 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS08950 91ae2bc327d0870386663e4a099e33a1 615 Gene3D G3DSA:3.10.105.10 396 566 2.1E-46 T 23-04-2016 LT40_RS08950 91ae2bc327d0870386663e4a099e33a1 615 Gene3D G3DSA:3.10.105.10 330 363 2.1E-46 T 23-04-2016 LT40_RS08950 91ae2bc327d0870386663e4a099e33a1 615 PIRSF PIRSF002741 1 599 3.2E-92 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS08950 91ae2bc327d0870386663e4a099e33a1 615 SUPERFAMILY SSF53850 50 595 2.6E-111 T 23-04-2016 LT40_RS08950 91ae2bc327d0870386663e4a099e33a1 615 Gene3D G3DSA:3.40.190.10 216 329 2.0E-21 T 23-04-2016 LT40_RS08950 91ae2bc327d0870386663e4a099e33a1 615 PANTHER PTHR30290 386 606 7.6E-166 T 23-04-2016 LT40_RS08950 91ae2bc327d0870386663e4a099e33a1 615 PANTHER PTHR30290 1 361 7.6E-166 T 23-04-2016 LT40_RS08950 91ae2bc327d0870386663e4a099e33a1 615 Gene3D G3DSA:3.90.76.10 70 215 1.2E-31 T 23-04-2016 LT40_RS08050 80ad047f81bdde902762beb1c485f481 165 PANTHER PTHR40455 5 163 3.4E-13 T 23-04-2016 LT40_RS08050 80ad047f81bdde902762beb1c485f481 165 PANTHER PTHR40455:SF1 5 163 3.4E-13 T 23-04-2016 LT40_RS08050 80ad047f81bdde902762beb1c485f481 165 Gene3D G3DSA:1.10.260.40 89 155 3.7E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS08050 80ad047f81bdde902762beb1c485f481 165 SUPERFAMILY SSF47413 93 155 9.38E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS14930 2c064d5bb43641f6b9ab65b88c47b85c 462 PANTHER PTHR11785:SF24 4 453 9.7E-246 T 23-04-2016 LT40_RS14930 2c064d5bb43641f6b9ab65b88c47b85c 462 Pfam PF00324 Amino acid permease 17 425 3.7E-120 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LT40_RS14930 2c064d5bb43641f6b9ab65b88c47b85c 462 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LT40_RS14930 2c064d5bb43641f6b9ab65b88c47b85c 462 TIGRFAM TIGR01773 GABAperm: GABA permease 4 450 2.4E-222 T 23-04-2016 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 LT40_RS14930 2c064d5bb43641f6b9ab65b88c47b85c 462 PANTHER PTHR11785 4 453 9.7E-246 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS14930 2c064d5bb43641f6b9ab65b88c47b85c 462 PIRSF PIRSF006060 1 458 3.9E-80 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS12835 21c8ab2cf0f2369f071499d867dc61e9 289 PANTHER PTHR21299:SF1 1 283 1.6E-132 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 LT40_RS12835 21c8ab2cf0f2369f071499d867dc61e9 289 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.828 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 LT40_RS12835 21c8ab2cf0f2369f071499d867dc61e9 289 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 1.1E-102 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 LT40_RS12835 21c8ab2cf0f2369f071499d867dc61e9 289 Gene3D G3DSA:3.30.1300.10 181 282 5.1E-31 T 23-04-2016 LT40_RS12835 21c8ab2cf0f2369f071499d867dc61e9 289 PANTHER PTHR21299 1 283 1.6E-132 T 23-04-2016 LT40_RS12835 21c8ab2cf0f2369f071499d867dc61e9 289 Gene3D G3DSA:3.40.50.620 1 174 1.6E-76 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS12835 21c8ab2cf0f2369f071499d867dc61e9 289 SUPERFAMILY SSF52374 1 283 3.64E-107 T 23-04-2016 LT40_RS12835 21c8ab2cf0f2369f071499d867dc61e9 289 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 2.8E-104 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 LT40_RS02625 281e4e2149a69cbc309ea3ee8b2eee2f 672 PANTHER PTHR23028 10 469 1.6E-96 T 23-04-2016 LT40_RS02625 281e4e2149a69cbc309ea3ee8b2eee2f 672 PANTHER PTHR23028 498 575 1.6E-96 T 23-04-2016 LT40_RS02625 281e4e2149a69cbc309ea3ee8b2eee2f 672 PANTHER PTHR23028:SF53 10 469 1.6E-96 T 23-04-2016 LT40_RS02625 281e4e2149a69cbc309ea3ee8b2eee2f 672 PANTHER PTHR23028:SF53 498 575 1.6E-96 T 23-04-2016 LT40_RS02625 281e4e2149a69cbc309ea3ee8b2eee2f 672 Pfam PF01757 Acyltransferase family 13 337 1.9E-27 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LT40_RS12010 fc51b182aa6fdce3f6bd7ec2d16ace35 499 PANTHER PTHR31806:SF2 5 481 3.3E-209 T 23-04-2016 LT40_RS12010 fc51b182aa6fdce3f6bd7ec2d16ace35 499 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 14 434 8.8E-49 T 23-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 LT40_RS12010 fc51b182aa6fdce3f6bd7ec2d16ace35 499 PANTHER PTHR31806 5 481 3.3E-209 T 23-04-2016 LT40_RS12010 fc51b182aa6fdce3f6bd7ec2d16ace35 499 PIRSF PIRSF002744 1 480 2.8E-96 T 23-04-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 LT40_RS12780 96deeba8515613d3a4d0d1e46daa9443 90 Gene3D G3DSA:1.10.150.20 3 84 2.6E-25 T 23-04-2016 LT40_RS12780 96deeba8515613d3a4d0d1e46daa9443 90 PANTHER PTHR36121 1 77 6.1E-26 T 23-04-2016 LT40_RS12780 96deeba8515613d3a4d0d1e46daa9443 90 Pfam PF04994 TfoX C-terminal domain 1 80 3.9E-28 T 23-04-2016 IPR007077 TfoX, C-terminal LT40_RS12780 96deeba8515613d3a4d0d1e46daa9443 90 PANTHER PTHR36121:SF1 1 77 6.1E-26 T 23-04-2016 LT40_RS20495 a54cc0935d7e4a354c2d0e2c495012d0 297 SUPERFAMILY SSF53474 23 266 1.16E-41 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS20495 a54cc0935d7e4a354c2d0e2c495012d0 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 135 148 1.5E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS20495 a54cc0935d7e4a354c2d0e2c495012d0 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 149 162 1.5E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS20495 a54cc0935d7e4a354c2d0e2c495012d0 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 103 1.5E-6 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 LT40_RS20495 a54cc0935d7e4a354c2d0e2c495012d0 297 Pfam PF12146 Serine aminopeptidase, S33 59 164 2.0E-15 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 LT40_RS20495 a54cc0935d7e4a354c2d0e2c495012d0 297 Gene3D G3DSA:3.40.50.1820 31 261 1.3E-42 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS20495 a54cc0935d7e4a354c2d0e2c495012d0 297 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 135 149 6.2E-5 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LT40_RS20495 a54cc0935d7e4a354c2d0e2c495012d0 297 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 91 102 6.2E-5 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LT40_RS20495 a54cc0935d7e4a354c2d0e2c495012d0 297 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 64 72 6.2E-5 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LT40_RS20495 a54cc0935d7e4a354c2d0e2c495012d0 297 PANTHER PTHR12277 26 273 2.1E-45 T 23-04-2016 LT40_RS19275 cf8e1df3c2edff6536e7b789aee2c987 418 Pfam PF13557 Putative MetA-pathway of phenol degradation 206 404 1.6E-6 T 23-04-2016 IPR025737 MetA-pathway of phenol degradation, putative LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 28 260 3.5E-67 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 PANTHER PTHR23293 248 305 3.1E-97 T 23-04-2016 LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 PANTHER PTHR23293 177 210 3.1E-97 T 23-04-2016 LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 PANTHER PTHR23293 1 157 3.1E-97 T 23-04-2016 LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 3 305 56.411 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 8 305 1.3E-157 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 Gene3D G3DSA:3.40.50.620 5 209 3.6E-64 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 Gene3D G3DSA:3.40.50.620 247 256 3.6E-64 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 PANTHER PTHR23293:SF6 248 305 3.1E-97 T 23-04-2016 LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 PANTHER PTHR23293:SF6 177 210 3.1E-97 T 23-04-2016 LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 PANTHER PTHR23293:SF6 1 157 3.1E-97 T 23-04-2016 LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 SUPERFAMILY SSF52402 5 209 9.54E-78 T 23-04-2016 LT40_RS03885 3bcabe4dc9f9b426f3b6299f5fce41e0 305 PIRSF PIRSF002936 1 305 1.6E-155 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 LT40_RS20335 d284797eb9527a44b7708d0cf5aa878a 270 PANTHER PTHR38034 8 269 7.3E-80 T 23-04-2016 LT40_RS20335 d284797eb9527a44b7708d0cf5aa878a 270 Pfam PF01578 Cytochrome C assembly protein 42 267 9.0E-38 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 LT40_RS18600 8ef46dcaf77760b6c65ba82f673d286f 169 Pfam PF04608 Phosphatidylglycerophosphatase A 23 162 1.2E-53 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 LT40_RS18600 8ef46dcaf77760b6c65ba82f673d286f 169 PIRSF PIRSF006162 15 169 4.1E-50 T 23-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 LT40_RS18600 8ef46dcaf77760b6c65ba82f673d286f 169 SUPERFAMILY SSF101307 17 164 1.96E-47 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 LT40_RS18600 8ef46dcaf77760b6c65ba82f673d286f 169 PANTHER PTHR36305 8 168 5.0E-68 T 23-04-2016 LT40_RS19570 743688d8c6fcef918adddeeb5659531c 209 Pfam PF08682 Putative endonuclease, protein of unknown function (DUF1780) 2 209 6.6E-124 T 23-04-2016 IPR014796 Protein of unknown function DUF1780, putative endonuclease LT40_RS19570 743688d8c6fcef918adddeeb5659531c 209 SUPERFAMILY SSF52980 1 209 5.9E-118 T 23-04-2016 IPR011335 Restriction endonuclease type II-like LT40_RS19570 743688d8c6fcef918adddeeb5659531c 209 Gene3D G3DSA:3.40.1540.10 1 209 4.5E-132 T 23-04-2016 IPR014796 Protein of unknown function DUF1780, putative endonuclease LT40_RS02010 e2779b3c066a35b27ea07a51cf422b8b 96 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 91 7.2E-22 T 23-04-2016 LT40_RS02010 e2779b3c066a35b27ea07a51cf422b8b 96 SUPERFAMILY SSF54292 15 93 3.88E-16 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 LT40_RS02010 e2779b3c066a35b27ea07a51cf422b8b 96 Gene3D G3DSA:3.10.20.30 28 83 7.6E-4 T 23-04-2016 IPR012675 Beta-grasp domain LT40_RS19470 9d7583f7d7ddc6431baa2935764d695f 172 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site LT40_RS19470 9d7583f7d7ddc6431baa2935764d695f 172 Gene3D G3DSA:3.30.700.10 7 61 9.6E-7 T 23-04-2016 LT40_RS19470 9d7583f7d7ddc6431baa2935764d695f 172 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 4 73 1.4E-13 T 23-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 LT40_RS19470 9d7583f7d7ddc6431baa2935764d695f 172 Pfam PF12019 Type II transport protein GspH 42 154 1.9E-12 T 23-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 LT40_RS19470 9d7583f7d7ddc6431baa2935764d695f 172 SUPERFAMILY SSF54523 7 89 7.85E-16 T 23-04-2016 LT40_RS19470 9d7583f7d7ddc6431baa2935764d695f 172 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 4.5E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site LT40_RS19640 bfa5aeb11da3492e707416060afa88c6 199 Gene3D G3DSA:1.20.1440.20 18 198 1.5E-60 T 23-04-2016 IPR023353 LemA-like domain LT40_RS19640 bfa5aeb11da3492e707416060afa88c6 199 SUPERFAMILY SSF140478 29 179 3.79E-52 T 23-04-2016 IPR023353 LemA-like domain LT40_RS19640 bfa5aeb11da3492e707416060afa88c6 199 PANTHER PTHR34478:SF2 1 199 5.2E-75 T 23-04-2016 LT40_RS19640 bfa5aeb11da3492e707416060afa88c6 199 Pfam PF04011 LemA family 11 198 6.6E-64 T 23-04-2016 IPR007156 LemA LT40_RS19640 bfa5aeb11da3492e707416060afa88c6 199 PANTHER PTHR34478 1 199 5.2E-75 T 23-04-2016 LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 Pfam PF01514 Secretory protein of YscJ/FliF family 43 234 4.7E-69 T 23-04-2016 IPR006182 Secretory protein YscJ/FliF LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 30 594 4.4E-96 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 PIRSF PIRSF004862 15 595 5.9E-138 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 PANTHER PTHR30046 371 595 3.4E-186 T 23-04-2016 LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 PANTHER PTHR30046 12 337 3.4E-186 T 23-04-2016 LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 PRINTS PR01009 Flagellar M-ring protein signature 388 412 2.9E-39 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 PRINTS PR01009 Flagellar M-ring protein signature 167 181 2.9E-39 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 PRINTS PR01009 Flagellar M-ring protein signature 210 228 2.9E-39 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 PRINTS PR01009 Flagellar M-ring protein signature 135 153 2.9E-39 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 PRINTS PR01009 Flagellar M-ring protein signature 280 298 2.9E-39 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 Pfam PF08345 Flagellar M-ring protein C-terminal 267 465 1.4E-46 T 23-04-2016 IPR013556 Flagellar M-ring C-terminal LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 PANTHER PTHR30046:SF0 371 595 3.4E-186 T 23-04-2016 LT40_RS02405 fd5a8baa17d000c727d7bdd3f9413d6a 595 PANTHER PTHR30046:SF0 12 337 3.4E-186 T 23-04-2016 LT40_RS18040 f0da0a491a5d72f3a7acb14b730df46f 171 PANTHER PTHR20941 5 165 5.5E-73 T 23-04-2016 LT40_RS18040 f0da0a491a5d72f3a7acb14b730df46f 171 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 130 1.2E-20 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS18040 f0da0a491a5d72f3a7acb14b730df46f 171 Gene3D G3DSA:3.30.70.560 5 152 2.9E-33 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS18040 f0da0a491a5d72f3a7acb14b730df46f 171 SUPERFAMILY SSF55083 4 152 1.11E-36 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS18040 f0da0a491a5d72f3a7acb14b730df46f 171 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 7 130 7.5E-21 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 LT40_RS18040 f0da0a491a5d72f3a7acb14b730df46f 171 PANTHER PTHR20941:SF12 5 165 5.5E-73 T 23-04-2016 LT40_RS05165 3b43f25aa45fb426e6a04db7a549d396 310 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS05165 3b43f25aa45fb426e6a04db7a549d396 310 Gene3D G3DSA:3.40.50.300 2 225 4.3E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05165 3b43f25aa45fb426e6a04db7a549d396 310 SUPERFAMILY SSF52540 4 233 3.34E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS05165 3b43f25aa45fb426e6a04db7a549d396 310 PANTHER PTHR24220:SF305 6 302 8.8E-169 T 23-04-2016 LT40_RS05165 3b43f25aa45fb426e6a04db7a549d396 310 Pfam PF00005 ABC transporter 21 165 1.2E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS05165 3b43f25aa45fb426e6a04db7a549d396 310 PANTHER PTHR24220 6 302 8.8E-169 T 23-04-2016 LT40_RS05165 3b43f25aa45fb426e6a04db7a549d396 310 SMART SM00382 30 213 2.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS18545 06491edced8ac5809f24173ea6e52c32 197 Pfam PF10986 Protein of unknown function (DUF2796) 36 193 7.8E-55 T 23-04-2016 IPR021253 Protein of unknown function DUF2796 LT40_RS13970 b876b985c834b6c23ae199aac59d4198 202 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 187 5.9E-61 T 23-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA LT40_RS13970 b876b985c834b6c23ae199aac59d4198 202 SUPERFAMILY SSF53474 5 186 2.03E-18 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS13970 b876b985c834b6c23ae199aac59d4198 202 PANTHER PTHR35602:SF3 1 192 1.7E-90 T 23-04-2016 LT40_RS13970 b876b985c834b6c23ae199aac59d4198 202 PANTHER PTHR35602 1 192 1.7E-90 T 23-04-2016 LT40_RS13970 b876b985c834b6c23ae199aac59d4198 202 Gene3D G3DSA:3.40.50.1820 4 96 1.3E-16 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS13970 b876b985c834b6c23ae199aac59d4198 202 Gene3D G3DSA:3.40.50.1820 128 184 1.3E-16 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS01100 c230c89e87433cca435ef6e64fb5d1ab 487 PANTHER PTHR11699 1 453 8.1E-274 T 23-04-2016 LT40_RS01100 c230c89e87433cca435ef6e64fb5d1ab 487 SUPERFAMILY SSF53720 3 456 7.2E-119 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS01100 c230c89e87433cca435ef6e64fb5d1ab 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LT40_RS01100 c230c89e87433cca435ef6e64fb5d1ab 487 Gene3D G3DSA:3.40.605.10 3 257 2.9E-70 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS01100 c230c89e87433cca435ef6e64fb5d1ab 487 Pfam PF00171 Aldehyde dehydrogenase family 10 461 4.2E-116 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS01100 c230c89e87433cca435ef6e64fb5d1ab 487 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 4 486 2.1E-246 T 23-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 LT40_RS01100 c230c89e87433cca435ef6e64fb5d1ab 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS01100 c230c89e87433cca435ef6e64fb5d1ab 487 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 2 487 57.507 T 23-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 LT40_RS01100 c230c89e87433cca435ef6e64fb5d1ab 487 PANTHER PTHR11699:SF197 1 453 8.1E-274 T 23-04-2016 LT40_RS01100 c230c89e87433cca435ef6e64fb5d1ab 487 Gene3D G3DSA:3.40.309.10 258 446 2.5E-40 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS18480 c2436297544e86f637c91ff1680641c3 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.3E-46 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18480 c2436297544e86f637c91ff1680641c3 128 SUPERFAMILY SSF64263 1 119 1.03E-49 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18480 c2436297544e86f637c91ff1680641c3 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18480 c2436297544e86f637c91ff1680641c3 128 Pfam PF01196 Ribosomal protein L17 20 116 8.3E-33 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18480 c2436297544e86f637c91ff1680641c3 128 PANTHER PTHR14413 1 119 2.5E-62 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18480 c2436297544e86f637c91ff1680641c3 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.527 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18480 c2436297544e86f637c91ff1680641c3 128 Gene3D G3DSA:3.90.1030.10 1 117 2.0E-48 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS07600 60fad85d48ee89af003c0365e568d9b8 413 PANTHER PTHR30489 1 413 9.1E-15 T 23-04-2016 LT40_RS07600 60fad85d48ee89af003c0365e568d9b8 413 Pfam PF02687 FtsX-like permease family 287 406 2.8E-11 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LT40_RS08435 ab043d2aea1b62eaa37421f3fada6435 452 Pfam PF13440 Polysaccharide biosynthesis protein 49 352 1.4E-14 T 23-04-2016 LT40_RS16830 455b143157fc500106d1a3e1906b6e98 204 Pfam PF09335 SNARE associated Golgi protein 22 140 6.7E-17 T 23-04-2016 IPR032816 SNARE associated Golgi protein LT40_RS16830 455b143157fc500106d1a3e1906b6e98 204 PANTHER PTHR30353:SF8 1 187 2.1E-84 T 23-04-2016 LT40_RS16830 455b143157fc500106d1a3e1906b6e98 204 PANTHER PTHR30353 1 187 2.1E-84 T 23-04-2016 IPR032818 DedA family LT40_RS15325 3dc2e9891b2536d3550101c94cd37e12 359 SUPERFAMILY SSF111369 48 262 4.84E-24 T 23-04-2016 LT40_RS15325 3dc2e9891b2536d3550101c94cd37e12 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 353 8.3E-69 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LT40_RS15325 3dc2e9891b2536d3550101c94cd37e12 359 PANTHER PTHR30469:SF7 11 359 4.6E-136 T 23-04-2016 LT40_RS15325 3dc2e9891b2536d3550101c94cd37e12 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 261 1.2E-14 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain LT40_RS15325 3dc2e9891b2536d3550101c94cd37e12 359 PANTHER PTHR30469 11 359 4.6E-136 T 23-04-2016 LT40_RS15325 3dc2e9891b2536d3550101c94cd37e12 359 Gene3D G3DSA:2.40.50.100 167 196 1.1E-13 T 23-04-2016 LT40_RS15325 3dc2e9891b2536d3550101c94cd37e12 359 Gene3D G3DSA:2.40.50.100 60 92 1.1E-13 T 23-04-2016 LT40_RS07115 e078e489373a9a2face4f9cb4aa5469f 317 PANTHER PTHR30177 14 294 1.3E-119 T 23-04-2016 LT40_RS07115 e078e489373a9a2face4f9cb4aa5469f 317 PANTHER PTHR30177:SF2 14 294 1.3E-119 T 23-04-2016 LT40_RS07115 e078e489373a9a2face4f9cb4aa5469f 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 273 7.3E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS07115 e078e489373a9a2face4f9cb4aa5469f 317 SUPERFAMILY SSF161098 94 277 4.84E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS07115 e078e489373a9a2face4f9cb4aa5469f 317 Gene3D G3DSA:1.10.3720.10 59 277 7.5E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03670 6e5e80f0e8d48285c070d6a861e88046 450 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LT40_RS03670 6e5e80f0e8d48285c070d6a861e88046 450 Pfam PF00324 Amino acid permease 18 448 1.4E-112 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LT40_RS03670 6e5e80f0e8d48285c070d6a861e88046 450 PIRSF PIRSF006060 1 450 4.9E-73 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS03670 6e5e80f0e8d48285c070d6a861e88046 450 PANTHER PTHR11785:SF26 1 449 4.2E-265 T 23-04-2016 LT40_RS03670 6e5e80f0e8d48285c070d6a861e88046 450 PANTHER PTHR11785 1 449 4.2E-265 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LT40_RS06510 55d96f93f6714f660e3aff90b6b06037 255 Pfam PF05235 CHAD domain 21 212 4.8E-24 T 23-04-2016 IPR007899 CHAD domain LT40_RS06510 55d96f93f6714f660e3aff90b6b06037 255 SMART SM00880 10 251 8.9E-32 T 23-04-2016 IPR007899 CHAD domain LT40_RS11015 58cddf293b021b7e2a47693fcdc3e242 604 PANTHER PTHR31616 2 598 2.7E-188 T 23-04-2016 LT40_RS11015 58cddf293b021b7e2a47693fcdc3e242 604 SUPERFAMILY SSF48208 191 587 4.42E-103 T 23-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 LT40_RS11015 58cddf293b021b7e2a47693fcdc3e242 604 Pfam PF00723 Glycosyl hydrolases family 15 220 532 5.6E-55 T 23-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 LT40_RS11015 58cddf293b021b7e2a47693fcdc3e242 604 Gene3D G3DSA:1.50.10.10 216 599 7.1E-86 T 23-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 LT40_RS11015 58cddf293b021b7e2a47693fcdc3e242 604 PANTHER PTHR31616:SF0 2 598 2.7E-188 T 23-04-2016 LT40_RS15615 eac8c3a60a9f54a6ff898580d95e3211 463 Gene3D G3DSA:3.30.830.10 295 417 1.3E-6 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LT40_RS15615 eac8c3a60a9f54a6ff898580d95e3211 463 Gene3D G3DSA:3.30.830.10 22 232 2.3E-33 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 LT40_RS15615 eac8c3a60a9f54a6ff898580d95e3211 463 SUPERFAMILY SSF63411 23 219 1.75E-29 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LT40_RS15615 eac8c3a60a9f54a6ff898580d95e3211 463 PANTHER PTHR11851:SF124 389 440 3.1E-31 T 23-04-2016 LT40_RS15615 eac8c3a60a9f54a6ff898580d95e3211 463 PANTHER PTHR11851:SF124 31 362 3.1E-31 T 23-04-2016 LT40_RS15615 eac8c3a60a9f54a6ff898580d95e3211 463 Pfam PF05193 Peptidase M16 inactive domain 191 362 9.2E-17 T 23-04-2016 IPR007863 Peptidase M16, C-terminal LT40_RS15615 eac8c3a60a9f54a6ff898580d95e3211 463 Pfam PF00675 Insulinase (Peptidase family M16) 67 183 4.1E-12 T 23-04-2016 IPR011765 Peptidase M16, N-terminal LT40_RS15615 eac8c3a60a9f54a6ff898580d95e3211 463 SUPERFAMILY SSF63411 263 428 2.44E-14 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LT40_RS15615 eac8c3a60a9f54a6ff898580d95e3211 463 PANTHER PTHR11851 389 440 3.1E-31 T 23-04-2016 LT40_RS15615 eac8c3a60a9f54a6ff898580d95e3211 463 PANTHER PTHR11851 31 362 3.1E-31 T 23-04-2016 LT40_RS05455 fc7f5700fb677d8a93a727c8d894ca50 107 Pfam PF01381 Helix-turn-helix 49 91 4.3E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS05455 fc7f5700fb677d8a93a727c8d894ca50 107 PANTHER PTHR40275 1 99 1.7E-25 T 23-04-2016 LT40_RS05455 fc7f5700fb677d8a93a727c8d894ca50 107 PANTHER PTHR40275:SF1 1 99 1.7E-25 T 23-04-2016 LT40_RS05455 fc7f5700fb677d8a93a727c8d894ca50 107 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 4 93 2.8E-37 T 23-04-2016 IPR014057 Addiction module antidote protein, HI1420 LT40_RS05455 fc7f5700fb677d8a93a727c8d894ca50 107 SUPERFAMILY SSF47413 29 92 2.18E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS05455 fc7f5700fb677d8a93a727c8d894ca50 107 Gene3D G3DSA:1.10.260.40 50 92 9.9E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS08640 03d386df3a72b7c6c0b5f577a63bddf8 83 Pfam PF07867 Protein of unknown function (DUF1654) 14 82 2.4E-24 T 23-04-2016 IPR012449 Bacteriophage F116, Orf28 LT40_RS10830 5e7f310fb56d38a7ab9d40a0b0bcb3f3 359 PANTHER PTHR24220 1 229 8.4E-97 T 23-04-2016 LT40_RS10830 5e7f310fb56d38a7ab9d40a0b0bcb3f3 359 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS10830 5e7f310fb56d38a7ab9d40a0b0bcb3f3 359 PANTHER PTHR24220:SF284 1 229 8.4E-97 T 23-04-2016 LT40_RS10830 5e7f310fb56d38a7ab9d40a0b0bcb3f3 359 SUPERFAMILY SSF52540 6 218 4.63E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10830 5e7f310fb56d38a7ab9d40a0b0bcb3f3 359 SMART SM00382 23 210 1.2E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS10830 5e7f310fb56d38a7ab9d40a0b0bcb3f3 359 SUPERFAMILY SSF50331 239 358 1.77E-16 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS10830 5e7f310fb56d38a7ab9d40a0b0bcb3f3 359 Pfam PF03459 TOBE domain 295 357 3.8E-12 T 23-04-2016 IPR005116 Transport-associated OB, type 1 LT40_RS10830 5e7f310fb56d38a7ab9d40a0b0bcb3f3 359 Gene3D G3DSA:2.40.50.100 282 355 6.0E-16 T 23-04-2016 LT40_RS10830 5e7f310fb56d38a7ab9d40a0b0bcb3f3 359 Gene3D G3DSA:3.40.50.300 16 219 2.2E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS10830 5e7f310fb56d38a7ab9d40a0b0bcb3f3 359 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 357 3.2E-132 T 23-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 LT40_RS10830 5e7f310fb56d38a7ab9d40a0b0bcb3f3 359 Pfam PF00005 ABC transporter 16 160 3.5E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS11800 2cc3a4b7e2a6884787b7c2ae3f23a551 241 PANTHER PTHR30625 16 234 1.6E-56 T 23-04-2016 LT40_RS11800 2cc3a4b7e2a6884787b7c2ae3f23a551 241 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 200 3.3E-36 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 LT40_RS11800 2cc3a4b7e2a6884787b7c2ae3f23a551 241 PANTHER PTHR30625:SF3 16 234 1.6E-56 T 23-04-2016 LT40_RS09515 faee9d48b496504faa76ba597ea562c3 216 PANTHER PTHR23091:SF240 1 88 8.5E-20 T 23-04-2016 LT40_RS09515 faee9d48b496504faa76ba597ea562c3 216 PANTHER PTHR23091:SF240 126 193 8.5E-20 T 23-04-2016 LT40_RS09515 faee9d48b496504faa76ba597ea562c3 216 PANTHER PTHR23091 1 88 8.5E-20 T 23-04-2016 LT40_RS09515 faee9d48b496504faa76ba597ea562c3 216 PANTHER PTHR23091 126 193 8.5E-20 T 23-04-2016 LT40_RS09515 faee9d48b496504faa76ba597ea562c3 216 SUPERFAMILY SSF55729 11 203 1.63E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS09515 faee9d48b496504faa76ba597ea562c3 216 Gene3D G3DSA:3.40.630.30 10 195 1.7E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS17855 1405af9dd84ff6d97e763093ac192f90 303 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 303 178.031 T 23-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 LT40_RS17855 1405af9dd84ff6d97e763093ac192f90 303 SUPERFAMILY SSF56281 1 303 1.34E-67 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS17855 1405af9dd84ff6d97e763093ac192f90 303 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 3 303 4.3E-137 T 23-04-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 UniPathway: UPA00539 LT40_RS17855 1405af9dd84ff6d97e763093ac192f90 303 Pfam PF12706 Beta-lactamase superfamily domain 50 270 1.7E-51 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS17855 1405af9dd84ff6d97e763093ac192f90 303 Gene3D G3DSA:3.60.15.10 1 303 1.2E-126 T 23-04-2016 IPR001279 Metallo-beta-lactamase LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 PANTHER PTHR30295:SF9 1 154 8.1E-48 T 23-04-2016 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 PRINTS PR00601 Bacterioferritin signature 128 149 2.1E-62 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 PRINTS PR00601 Bacterioferritin signature 3 22 2.1E-62 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 PRINTS PR00601 Bacterioferritin signature 23 43 2.1E-62 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 PRINTS PR00601 Bacterioferritin signature 107 127 2.1E-62 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 PRINTS PR00601 Bacterioferritin signature 65 85 2.1E-62 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 PRINTS PR00601 Bacterioferritin signature 44 64 2.1E-62 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 PRINTS PR00601 Bacterioferritin signature 86 106 2.1E-62 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 Gene3D G3DSA:1.20.1260.10 1 157 1.2E-55 T 23-04-2016 IPR012347 Ferritin-related LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 Pfam PF00210 Ferritin-like domain 8 143 2.1E-33 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 SUPERFAMILY SSF47240 1 153 8.8E-46 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 PANTHER PTHR30295 1 154 8.1E-48 T 23-04-2016 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 PIRSF PIRSF002560 1 157 5.3E-66 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS05335 ddeddbacfe0623b3d2e4b94c23c23fc7 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 1.9E-70 T 23-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 LT40_RS01205 d4a6825ebbb9c754ec192ebaab5059e3 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 115 1.0E-23 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS01205 d4a6825ebbb9c754ec192ebaab5059e3 222 PANTHER PTHR30614:SF1 1 222 1.7E-131 T 23-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 LT40_RS01205 d4a6825ebbb9c754ec192ebaab5059e3 222 Gene3D G3DSA:1.10.3720.10 11 220 5.1E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS01205 d4a6825ebbb9c754ec192ebaab5059e3 222 SUPERFAMILY SSF161098 12 212 6.93E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS01205 d4a6825ebbb9c754ec192ebaab5059e3 222 PANTHER PTHR30614 1 222 1.7E-131 T 23-04-2016 LT40_RS01205 d4a6825ebbb9c754ec192ebaab5059e3 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 220 1.3E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS19655 175530b5139927aed0db7601c0123aea 257 PANTHER PTHR33121:SF15 27 254 2.6E-72 T 23-04-2016 LT40_RS19655 175530b5139927aed0db7601c0123aea 257 Pfam PF00563 EAL domain 27 248 1.2E-44 T 23-04-2016 IPR001633 EAL domain LT40_RS19655 175530b5139927aed0db7601c0123aea 257 Gene3D G3DSA:3.20.20.450 27 249 3.0E-49 T 23-04-2016 IPR001633 EAL domain LT40_RS19655 175530b5139927aed0db7601c0123aea 257 PANTHER PTHR33121 27 254 2.6E-72 T 23-04-2016 LT40_RS19655 175530b5139927aed0db7601c0123aea 257 SMART SM00052 21 253 1.1E-29 T 23-04-2016 IPR001633 EAL domain LT40_RS19655 175530b5139927aed0db7601c0123aea 257 SUPERFAMILY SSF141868 27 249 7.85E-58 T 23-04-2016 IPR001633 EAL domain LT40_RS07320 1209b73fce0edeaa96d5c2c18e862caa 336 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 296 4.4E-78 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS07320 1209b73fce0edeaa96d5c2c18e862caa 336 Gene3D G3DSA:3.20.20.300 9 304 1.3E-90 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LT40_RS07320 1209b73fce0edeaa96d5c2c18e862caa 336 SUPERFAMILY SSF51445 7 301 5.58E-84 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS07320 1209b73fce0edeaa96d5c2c18e862caa 336 PANTHER PTHR30480 9 289 7.0E-120 T 23-04-2016 LT40_RS07320 1209b73fce0edeaa96d5c2c18e862caa 336 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 8 334 49.44 T 23-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 LT40_RS07320 1209b73fce0edeaa96d5c2c18e862caa 336 PANTHER PTHR30480:SF7 9 289 7.0E-120 T 23-04-2016 LT40_RS07320 1209b73fce0edeaa96d5c2c18e862caa 336 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 23-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 LT40_RS17375 2312f879d203862a3c0f074bb97597b7 98 Pfam PF09904 Winged helix-turn helix 5 95 4.9E-40 T 23-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 LT40_RS17375 2312f879d203862a3c0f074bb97597b7 98 PIRSF PIRSF037266 1 98 6.2E-45 T 23-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 LT40_RS19895 04b9301cfa3560c48e96181aa31bb1ad 420 Pfam PF00860 Permease family 12 379 2.5E-93 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS19895 04b9301cfa3560c48e96181aa31bb1ad 420 PANTHER PTHR11119 8 409 4.2E-169 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS19895 04b9301cfa3560c48e96181aa31bb1ad 420 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 327 347 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LT40_RS19895 04b9301cfa3560c48e96181aa31bb1ad 420 PANTHER PTHR11119:SF49 8 409 4.2E-169 T 23-04-2016 LT40_RS19895 04b9301cfa3560c48e96181aa31bb1ad 420 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 10 407 4.9E-112 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 LT40_RS11360 80e9b19390735dcfcddd75fb39e5a667 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 39 182 2.2E-67 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 LT40_RS11360 80e9b19390735dcfcddd75fb39e5a667 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 LT40_RS11360 80e9b19390735dcfcddd75fb39e5a667 224 SUPERFAMILY SSF56770 44 189 2.22E-63 T 23-04-2016 LT40_RS11360 80e9b19390735dcfcddd75fb39e5a667 224 PANTHER PTHR11995 2 220 3.5E-134 T 23-04-2016 LT40_RS11360 80e9b19390735dcfcddd75fb39e5a667 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 42.586 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 LT40_RS11360 80e9b19390735dcfcddd75fb39e5a667 224 Gene3D G3DSA:3.40.50.700 51 178 2.7E-30 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 LT40_RS11360 80e9b19390735dcfcddd75fb39e5a667 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 87 174 2.0E-21 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 LT40_RS11360 80e9b19390735dcfcddd75fb39e5a667 224 PANTHER PTHR11995:SF14 2 220 3.5E-134 T 23-04-2016 LT40_RS02940 673a8cb243ad025248dc1fad610d4fa4 150 PANTHER PTHR23091 1 148 2.9E-29 T 23-04-2016 LT40_RS02940 673a8cb243ad025248dc1fad610d4fa4 150 Pfam PF13673 Acetyltransferase (GNAT) domain 40 128 5.3E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS02940 673a8cb243ad025248dc1fad610d4fa4 150 PANTHER PTHR23091:SF247 1 148 2.9E-29 T 23-04-2016 LT40_RS02940 673a8cb243ad025248dc1fad610d4fa4 150 SUPERFAMILY SSF55729 1 148 8.61E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS02940 673a8cb243ad025248dc1fad610d4fa4 150 Gene3D G3DSA:3.40.630.30 5 148 1.1E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS02940 673a8cb243ad025248dc1fad610d4fa4 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 144 1.7E-40 T 23-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 LT40_RS01875 affe04972446b8513451c45dc46ffa2a 447 Pfam PF00425 chorismate binding enzyme 183 435 4.6E-93 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal LT40_RS01875 affe04972446b8513451c45dc46ffa2a 447 SUPERFAMILY SSF56322 6 444 1.16E-134 T 23-04-2016 IPR005801 ADC synthase GO:0009058 LT40_RS01875 affe04972446b8513451c45dc46ffa2a 447 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 93 439 3.1E-111 T 23-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 LT40_RS01875 affe04972446b8513451c45dc46ffa2a 447 PRINTS PR00095 Anthranilate synthase component I signature 298 311 1.9E-15 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS01875 affe04972446b8513451c45dc46ffa2a 447 PRINTS PR00095 Anthranilate synthase component I signature 378 392 1.9E-15 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS01875 affe04972446b8513451c45dc46ffa2a 447 PRINTS PR00095 Anthranilate synthase component I signature 393 407 1.9E-15 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS01875 affe04972446b8513451c45dc46ffa2a 447 PRINTS PR00095 Anthranilate synthase component I signature 284 297 1.9E-15 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS01875 affe04972446b8513451c45dc46ffa2a 447 Pfam PF04715 Anthranilate synthase component I, N terminal region 14 138 5.7E-18 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 LT40_RS01875 affe04972446b8513451c45dc46ffa2a 447 PANTHER PTHR11236 8 445 1.6E-148 T 23-04-2016 LT40_RS01875 affe04972446b8513451c45dc46ffa2a 447 Gene3D G3DSA:3.60.120.10 8 444 3.9E-142 T 23-04-2016 IPR005801 ADC synthase GO:0009058 LT40_RS15885 2d7ee6c0954f5468b903d90189b99981 71 Gene3D G3DSA:3.30.1660.10 4 70 1.9E-34 T 23-04-2016 IPR025543 Dodecin-like LT40_RS15885 2d7ee6c0954f5468b903d90189b99981 71 Pfam PF07311 Dodecin 6 68 2.7E-30 T 23-04-2016 IPR009923 Dodecin LT40_RS15885 2d7ee6c0954f5468b903d90189b99981 71 PANTHER PTHR39324:SF1 1 71 4.7E-25 T 23-04-2016 LT40_RS15885 2d7ee6c0954f5468b903d90189b99981 71 SUPERFAMILY SSF89807 6 70 1.83E-26 T 23-04-2016 IPR009923 Dodecin LT40_RS15885 2d7ee6c0954f5468b903d90189b99981 71 PANTHER PTHR39324 1 71 4.7E-25 T 23-04-2016 LT40_RS01880 6e39e8487d131c543e78a3009de2570b 328 SUPERFAMILY SSF56059 232 281 1.42E-18 T 23-04-2016 LT40_RS01880 6e39e8487d131c543e78a3009de2570b 328 SUPERFAMILY SSF56059 41 202 1.42E-18 T 23-04-2016 LT40_RS01880 6e39e8487d131c543e78a3009de2570b 328 Gene3D G3DSA:3.30.470.20 40 101 1.5E-4 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS01880 6e39e8487d131c543e78a3009de2570b 328 Gene3D G3DSA:3.30.470.20 239 288 7.0E-5 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LT40_RS01880 6e39e8487d131c543e78a3009de2570b 328 Pfam PF14397 Sugar-transfer associated ATP-grasp 21 295 1.3E-99 T 23-04-2016 LT40_RS01880 6e39e8487d131c543e78a3009de2570b 328 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 5 324 1.5E-170 T 23-04-2016 IPR011758 Alpha-L-glutamate ligase-related protein LT40_RS16660 59851ebd2da613d66f1ba98f3d3978fb 496 Gene3D G3DSA:3.40.309.10 267 455 6.6E-52 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LT40_RS16660 59851ebd2da613d66f1ba98f3d3978fb 496 Pfam PF00171 Aldehyde dehydrogenase family 20 478 1.3E-127 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LT40_RS16660 59851ebd2da613d66f1ba98f3d3978fb 496 Gene3D G3DSA:3.40.605.10 20 266 5.0E-71 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LT40_RS16660 59851ebd2da613d66f1ba98f3d3978fb 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LT40_RS16660 59851ebd2da613d66f1ba98f3d3978fb 496 PANTHER PTHR11699:SF144 24 496 1.1E-270 T 23-04-2016 LT40_RS16660 59851ebd2da613d66f1ba98f3d3978fb 496 PANTHER PTHR11699 24 496 1.1E-270 T 23-04-2016 LT40_RS16660 59851ebd2da613d66f1ba98f3d3978fb 496 SUPERFAMILY SSF53720 18 483 3.53E-131 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LT40_RS11590 7325cbd82bf8ea4385d614bc9e9f1dcf 358 PANTHER PTHR11360:SF126 7 343 3.9E-43 T 23-04-2016 LT40_RS11590 7325cbd82bf8ea4385d614bc9e9f1dcf 358 PANTHER PTHR11360 7 343 3.9E-43 T 23-04-2016 LT40_RS11590 7325cbd82bf8ea4385d614bc9e9f1dcf 358 SUPERFAMILY SSF103473 5 353 9.55E-32 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS11590 7325cbd82bf8ea4385d614bc9e9f1dcf 358 Pfam PF07690 Major Facilitator Superfamily 15 277 6.1E-14 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS11590 7325cbd82bf8ea4385d614bc9e9f1dcf 358 Gene3D G3DSA:1.20.1250.20 179 350 7.7E-4 T 23-04-2016 LT40_RS11590 7325cbd82bf8ea4385d614bc9e9f1dcf 358 Gene3D G3DSA:1.20.1250.20 5 159 8.9E-13 T 23-04-2016 LT40_RS03040 de296b1a09a727790af493dac48064a3 160 Pfam PF04449 CS1 type fimbrial major subunit 24 155 3.4E-18 T 23-04-2016 IPR007540 Fimbrial major subunit, CS1-type GO:0009289 LT40_RS04585 10f2e0416a197850e9afcee015e15896 313 Pfam PF01571 Aminomethyltransferase folate-binding domain 8 108 4.7E-5 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal LT40_RS04585 10f2e0416a197850e9afcee015e15896 313 Gene3D G3DSA:3.30.70.1400 14 98 1.1E-28 T 23-04-2016 LT40_RS04585 10f2e0416a197850e9afcee015e15896 313 SUPERFAMILY SSF101790 228 306 1.9E-11 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain LT40_RS04585 10f2e0416a197850e9afcee015e15896 313 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 171 235 3.0E-26 T 23-04-2016 IPR017703 YgfZ/GcvT conserved site LT40_RS04585 10f2e0416a197850e9afcee015e15896 313 PANTHER PTHR22602:SF0 6 286 4.8E-53 T 23-04-2016 LT40_RS04585 10f2e0416a197850e9afcee015e15896 313 SUPERFAMILY SSF103025 4 226 1.88E-54 T 23-04-2016 LT40_RS04585 10f2e0416a197850e9afcee015e15896 313 PANTHER PTHR22602 6 286 4.8E-53 T 23-04-2016 LT40_RS04585 10f2e0416a197850e9afcee015e15896 313 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 210 285 1.5E-5 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 LT40_RS12465 34f5add42fda6ede79d70c63ad267334 146 PANTHER PTHR26402 1 108 4.0E-14 T 23-04-2016 LT40_RS12465 34f5add42fda6ede79d70c63ad267334 146 SMART SM00448 1 110 2.2E-10 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS12465 34f5add42fda6ede79d70c63ad267334 146 SUPERFAMILY SSF52172 1 115 3.27E-19 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS12465 34f5add42fda6ede79d70c63ad267334 146 Gene3D G3DSA:3.40.50.2300 1 110 2.4E-16 T 23-04-2016 LT40_RS12465 34f5add42fda6ede79d70c63ad267334 146 Pfam PF00072 Response regulator receiver domain 3 107 3.1E-11 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 SUPERFAMILY SSF52172 587 698 2.7E-26 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 PANTHER PTHR24423:SF438 326 698 1.7E-119 T 23-04-2016 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 Gene3D G3DSA:1.10.287.130 336 404 3.6E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 SUPERFAMILY SSF55874 398 560 6.9E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 Gene3D G3DSA:3.30.565.10 407 560 3.9E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 PANTHER PTHR24423 326 698 1.7E-119 T 23-04-2016 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 SUPERFAMILY SSF47384 333 406 1.24E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 Gene3D G3DSA:3.40.50.2300 587 699 7.9E-27 T 23-04-2016 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 Pfam PF00072 Response regulator receiver domain 587 693 1.6E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 SMART SM00448 585 693 6.8E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 SMART SM00388 342 408 1.9E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 Pfam PF00512 His Kinase A (phospho-acceptor) domain 343 405 7.4E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 450 561 1.9E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 505 4.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 519 4.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 540 4.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 559 4.5E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 LT40_RS20880 c3ce7c50cbdb592655a45ee119906a59 704 SMART SM00387 449 562 2.1E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain LT40_RS17925 516631b6b05bf02ae043c4945427e06a 308 Pfam PF00535 Glycosyl transferase family 2 21 136 4.2E-16 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS17925 516631b6b05bf02ae043c4945427e06a 308 PANTHER PTHR22916 16 233 1.4E-50 T 23-04-2016 LT40_RS17925 516631b6b05bf02ae043c4945427e06a 308 Gene3D G3DSA:3.90.550.10 17 155 4.8E-31 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS17925 516631b6b05bf02ae043c4945427e06a 308 PANTHER PTHR22916:SF2 16 233 1.4E-50 T 23-04-2016 LT40_RS17925 516631b6b05bf02ae043c4945427e06a 308 SUPERFAMILY SSF53448 18 244 4.03E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.8E-17 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 SUPERFAMILY SSF47413 1 59 1.51E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 Gene3D G3DSA:3.40.50.2300 54 172 5.2E-51 T 23-04-2016 LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 Gene3D G3DSA:1.10.260.40 2 53 1.9E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 SUPERFAMILY SSF53822 61 331 2.72E-89 T 23-04-2016 IPR028082 Periplasmic binding protein-like I LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 Pfam PF13377 Periplasmic binding protein-like domain 170 329 7.9E-41 T 23-04-2016 LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.4E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.4E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 PANTHER PTHR30146:SF30 1 331 8.0E-132 T 23-04-2016 LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 SMART SM00354 1 71 3.4E-29 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 Gene3D G3DSA:3.40.50.2300 173 308 4.3E-54 T 23-04-2016 LT40_RS07460 2b60c6948ee94a8ac95c6130d8b4efe4 340 PANTHER PTHR30146 1 331 8.0E-132 T 23-04-2016 LT40_RS17200 7091242e425ece368cfb1bf23f00acff 265 Pfam PF01569 PAP2 superfamily 107 228 4.4E-11 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LT40_RS17200 7091242e425ece368cfb1bf23f00acff 265 Gene3D G3DSA:1.20.144.10 40 224 2.1E-7 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LT40_RS17200 7091242e425ece368cfb1bf23f00acff 265 SUPERFAMILY SSF48317 17 234 7.46E-13 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LT40_RS07055 c3494a31c5983b4fea4c4050c834b11e 146 PANTHER PTHR30537 3 139 9.7E-24 T 23-04-2016 LT40_RS07055 c3494a31c5983b4fea4c4050c834b11e 146 SUPERFAMILY SSF53850 2 142 7.06E-19 T 23-04-2016 LT40_RS07055 c3494a31c5983b4fea4c4050c834b11e 146 Pfam PF03466 LysR substrate binding domain 2 140 8.2E-18 T 23-04-2016 IPR005119 LysR, substrate-binding LT40_RS07055 c3494a31c5983b4fea4c4050c834b11e 146 Gene3D G3DSA:3.40.190.10 15 111 9.5E-23 T 23-04-2016 LT40_RS07055 c3494a31c5983b4fea4c4050c834b11e 146 PANTHER PTHR30537:SF15 3 139 9.7E-24 T 23-04-2016 LT40_RS11535 919ad21358397e35ea4f2b35a78cd1ab 331 Pfam PF00248 Aldo/keto reductase family 15 320 6.4E-76 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS11535 919ad21358397e35ea4f2b35a78cd1ab 331 PANTHER PTHR11732:SF255 1 322 1.1E-140 T 23-04-2016 LT40_RS11535 919ad21358397e35ea4f2b35a78cd1ab 331 Gene3D G3DSA:3.20.20.100 9 327 1.0E-107 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS11535 919ad21358397e35ea4f2b35a78cd1ab 331 SUPERFAMILY SSF51430 1 326 1.7E-102 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain LT40_RS11535 919ad21358397e35ea4f2b35a78cd1ab 331 PANTHER PTHR11732 1 322 1.1E-140 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta LT40_RS10790 36172761539e6a988b002535d48e0d53 97 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 4 96 9.3E-29 T 23-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 LT40_RS10790 36172761539e6a988b002535d48e0d53 97 PANTHER PTHR37526 3 96 3.2E-22 T 23-04-2016 LT40_RS10790 36172761539e6a988b002535d48e0d53 97 Pfam PF04077 DsrH like protein 9 93 5.9E-23 T 23-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 LT40_RS10790 36172761539e6a988b002535d48e0d53 97 SUPERFAMILY SSF75169 3 96 1.77E-25 T 23-04-2016 IPR027396 DsrEFH-like LT40_RS10790 36172761539e6a988b002535d48e0d53 97 Gene3D G3DSA:3.40.1260.10 4 93 2.4E-19 T 23-04-2016 IPR027396 DsrEFH-like LT40_RS09525 9c097df6860035aeaaef6ce94ac39210 1229 PANTHER PTHR36985 1 1229 6.0E-259 T 23-04-2016 LT40_RS09525 9c097df6860035aeaaef6ce94ac39210 1229 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 904 1229 1.4E-54 T 23-04-2016 IPR007452 Translocation and assembly module TamB LT40_RS03785 7c33598079a8e93b67009959341c40c4 102 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 2.1E-35 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LT40_RS03785 7c33598079a8e93b67009959341c40c4 102 SUPERFAMILY SSF69754 1 94 1.7E-35 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LT40_RS03785 7c33598079a8e93b67009959341c40c4 102 Gene3D G3DSA:3.30.160.100 1 93 7.9E-38 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LT40_RS03785 7c33598079a8e93b67009959341c40c4 102 PANTHER PTHR33231 1 91 4.0E-39 T 23-04-2016 LT40_RS03785 7c33598079a8e93b67009959341c40c4 102 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 7.4E-28 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LT40_RS03230 2905c96491914e5d6b409bd4bb97b23d 428 Gene3D G3DSA:3.40.190.10 149 348 1.0E-26 T 23-04-2016 LT40_RS03230 2905c96491914e5d6b409bd4bb97b23d 428 PANTHER PTHR30061:SF22 7 426 4.9E-100 T 23-04-2016 LT40_RS03230 2905c96491914e5d6b409bd4bb97b23d 428 SUPERFAMILY SSF53850 27 425 2.72E-53 T 23-04-2016 LT40_RS03230 2905c96491914e5d6b409bd4bb97b23d 428 PANTHER PTHR30061 7 426 4.9E-100 T 23-04-2016 LT40_RS00875 b48a2746a2ce7f830b1b0a978db3bc34 307 PANTHER PTHR11795:SF371 6 307 2.9E-136 T 23-04-2016 LT40_RS00875 b48a2746a2ce7f830b1b0a978db3bc34 307 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 291 3.9E-57 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS00875 b48a2746a2ce7f830b1b0a978db3bc34 307 PANTHER PTHR11795 6 307 2.9E-136 T 23-04-2016 LT40_RS02275 9e1790fe15bad5ff485b07173d0d056c 101 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 5 98 8.8E-26 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 LT40_RS02275 9e1790fe15bad5ff485b07173d0d056c 101 SUPERFAMILY SSF101498 10 98 1.96E-20 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 LT40_RS02275 9e1790fe15bad5ff485b07173d0d056c 101 Pfam PF04316 Anti-sigma-28 factor, FlgM 44 96 1.4E-19 T 23-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal LT40_RS09810 68bb34acd2d6b38485b873952dfb8929 383 PIRSF PIRSF005096 26 383 4.8E-130 T 23-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 LT40_RS09810 68bb34acd2d6b38485b873952dfb8929 383 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 203 212 - T 23-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 LT40_RS09810 68bb34acd2d6b38485b873952dfb8929 383 Pfam PF01263 Aldose 1-epimerase 45 378 1.1E-96 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 LT40_RS09810 68bb34acd2d6b38485b873952dfb8929 383 Gene3D G3DSA:2.70.98.10 29 381 3.3E-138 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 LT40_RS09810 68bb34acd2d6b38485b873952dfb8929 383 PANTHER PTHR10091 17 383 5.2E-165 T 23-04-2016 LT40_RS09810 68bb34acd2d6b38485b873952dfb8929 383 SUPERFAMILY SSF74650 32 381 1.88E-119 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LT40_RS09810 68bb34acd2d6b38485b873952dfb8929 383 PANTHER PTHR10091:SF0 17 383 5.2E-165 T 23-04-2016 LT40_RS01395 8eb0fd9f24475c3e953a41fcf1ae66b6 99 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 85 6.1E-31 T 23-04-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 LT40_RS01395 8eb0fd9f24475c3e953a41fcf1ae66b6 99 Pfam PF01381 Helix-turn-helix 20 69 2.7E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS01395 8eb0fd9f24475c3e953a41fcf1ae66b6 99 PANTHER PTHR36924:SF1 2 90 2.8E-35 T 23-04-2016 LT40_RS01395 8eb0fd9f24475c3e953a41fcf1ae66b6 99 SMART SM00530 14 70 0.005 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS01395 8eb0fd9f24475c3e953a41fcf1ae66b6 99 PANTHER PTHR36924 2 90 2.8E-35 T 23-04-2016 LT40_RS01395 8eb0fd9f24475c3e953a41fcf1ae66b6 99 SUPERFAMILY SSF47413 10 92 2.68E-23 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS01395 8eb0fd9f24475c3e953a41fcf1ae66b6 99 Gene3D G3DSA:1.10.260.40 4 92 3.2E-30 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS09075 d079967979378d5e7841f6471dd8d50f 404 Pfam PF00005 ABC transporter 40 172 1.3E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS09075 d079967979378d5e7841f6471dd8d50f 404 Gene3D G3DSA:3.40.50.300 2 242 1.6E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09075 d079967979378d5e7841f6471dd8d50f 404 SUPERFAMILY SSF52540 34 236 3.7E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09075 d079967979378d5e7841f6471dd8d50f 404 Gene3D G3DSA:2.70.50.60 256 396 7.6E-40 T 23-04-2016 LT40_RS09075 d079967979378d5e7841f6471dd8d50f 404 PANTHER PTHR24220 37 236 1.1E-100 T 23-04-2016 LT40_RS09075 d079967979378d5e7841f6471dd8d50f 404 PANTHER PTHR24220 5 15 1.1E-100 T 23-04-2016 LT40_RS09075 d079967979378d5e7841f6471dd8d50f 404 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS09075 d079967979378d5e7841f6471dd8d50f 404 PANTHER PTHR24220:SF117 37 236 1.1E-100 T 23-04-2016 LT40_RS09075 d079967979378d5e7841f6471dd8d50f 404 PANTHER PTHR24220:SF117 5 15 1.1E-100 T 23-04-2016 LT40_RS09075 d079967979378d5e7841f6471dd8d50f 404 Pfam PF14524 Wzt C-terminal domain 258 397 8.0E-35 T 23-04-2016 IPR029439 Wzt, C-terminal LT40_RS09075 d079967979378d5e7841f6471dd8d50f 404 SMART SM00382 49 227 4.6E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS04495 57635acf5cb5c2a1e674396b0a7c7301 340 Gene3D G3DSA:3.40.50.970 11 210 5.4E-53 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS04495 57635acf5cb5c2a1e674396b0a7c7301 340 SUPERFAMILY SSF52518 19 198 2.84E-49 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS04495 57635acf5cb5c2a1e674396b0a7c7301 340 Gene3D G3DSA:3.40.50.920 211 340 1.6E-36 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS04495 57635acf5cb5c2a1e674396b0a7c7301 340 Pfam PF02780 Transketolase, C-terminal domain 210 332 5.6E-29 T 23-04-2016 IPR033248 Transketolase, C-terminal domain LT40_RS04495 57635acf5cb5c2a1e674396b0a7c7301 340 SUPERFAMILY SSF52922 204 340 1.44E-33 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LT40_RS04495 57635acf5cb5c2a1e674396b0a7c7301 340 PANTHER PTHR11624:SF2 34 340 1.2E-96 T 23-04-2016 LT40_RS04495 57635acf5cb5c2a1e674396b0a7c7301 340 SMART SM00861 33 198 4.8E-44 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS04495 57635acf5cb5c2a1e674396b0a7c7301 340 Pfam PF02779 Transketolase, pyrimidine binding domain 37 197 4.4E-36 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain LT40_RS04495 57635acf5cb5c2a1e674396b0a7c7301 340 PANTHER PTHR11624 34 340 1.2E-96 T 23-04-2016 IPR033247 Transketolase family LT40_RS17775 dcd6f31e100faeb4784898947ff5b6c1 298 Pfam PF07395 Mig-14 35 297 1.1E-139 T 23-04-2016 IPR009977 Mig-14 LT40_RS17775 dcd6f31e100faeb4784898947ff5b6c1 298 PIRSF PIRSF029703 1 298 1.0E-130 T 23-04-2016 IPR009977 Mig-14 LT40_RS17775 dcd6f31e100faeb4784898947ff5b6c1 298 SUPERFAMILY SSF55729 137 291 6.36E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS17820 7b29a87f7c1428b19f5046eda2a2a8d6 110 Pfam PF00893 Small Multidrug Resistance protein 3 94 3.2E-26 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 LT40_RS17820 7b29a87f7c1428b19f5046eda2a2a8d6 110 PANTHER PTHR30561:SF1 1 110 1.2E-49 T 23-04-2016 LT40_RS17820 7b29a87f7c1428b19f5046eda2a2a8d6 110 PANTHER PTHR30561 1 110 1.2E-49 T 23-04-2016 LT40_RS17820 7b29a87f7c1428b19f5046eda2a2a8d6 110 SUPERFAMILY SSF103481 6 106 1.44E-19 T 23-04-2016 LT40_RS13100 bcac0a4a512885404f0c7e65b13b9b24 295 PANTHER PTHR30465:SF68 9 294 2.1E-128 T 23-04-2016 LT40_RS13100 bcac0a4a512885404f0c7e65b13b9b24 295 SUPERFAMILY SSF161098 87 274 1.83E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13100 bcac0a4a512885404f0c7e65b13b9b24 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 291 2.3E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13100 bcac0a4a512885404f0c7e65b13b9b24 295 PANTHER PTHR30465 9 294 2.1E-128 T 23-04-2016 LT40_RS13100 bcac0a4a512885404f0c7e65b13b9b24 295 Gene3D G3DSA:1.10.3720.10 83 289 5.5E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS13100 bcac0a4a512885404f0c7e65b13b9b24 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 68 4.8E-11 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LT40_RS12240 48fb26de8eda5cb8aab54f163f7766e6 147 SUPERFAMILY SSF55729 3 135 1.44E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS12240 48fb26de8eda5cb8aab54f163f7766e6 147 Gene3D G3DSA:3.40.630.30 1 135 3.3E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS12240 48fb26de8eda5cb8aab54f163f7766e6 147 PANTHER PTHR23091 1 131 6.7E-12 T 23-04-2016 LT40_RS12240 48fb26de8eda5cb8aab54f163f7766e6 147 Pfam PF00583 Acetyltransferase (GNAT) family 58 127 1.0E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS08450 6aa8b1c943d21e76a8c5e1007c66fe4e 330 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 20 292 9.3E-43 T 23-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 LT40_RS08450 6aa8b1c943d21e76a8c5e1007c66fe4e 330 Gene3D G3DSA:3.20.20.80 19 315 7.3E-79 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS08450 6aa8b1c943d21e76a8c5e1007c66fe4e 330 SUPERFAMILY SSF51445 19 312 1.59E-70 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS08450 6aa8b1c943d21e76a8c5e1007c66fe4e 330 PANTHER PTHR34142 19 303 8.0E-46 T 23-04-2016 LT40_RS16105 f0a64c7f9c00f386a7ab600814f8e8e1 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 2.2E-35 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LT40_RS16105 f0a64c7f9c00f386a7ab600814f8e8e1 156 Gene3D G3DSA:1.20.5.620 63 122 7.0E-20 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain LT40_RS16105 f0a64c7f9c00f386a7ab600814f8e8e1 156 PANTHER PTHR33445 1 156 1.4E-43 T 23-04-2016 LT40_RS16105 f0a64c7f9c00f386a7ab600814f8e8e1 156 SUPERFAMILY SSF81573 63 121 2.75E-14 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain LT40_RS16105 f0a64c7f9c00f386a7ab600814f8e8e1 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.429 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LT40_RS16105 f0a64c7f9c00f386a7ab600814f8e8e1 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 7.5E-46 T 23-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 PANTHER PTHR11482:SF6 3 387 3.5E-126 T 23-04-2016 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 PANTHER PTHR11482 3 387 3.5E-126 T 23-04-2016 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 Gene3D G3DSA:3.20.20.10 36 255 1.1E-60 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 23-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 SUPERFAMILY SSF50621 245 386 3.35E-31 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 54 72 - T 23-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 54 72 1.1E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 177 190 1.1E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 74 86 1.1E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 261 280 1.1E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 46 272 1.6E-53 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 276 384 3.0E-17 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 PRINTS PR01182 Ornithine decarboxylase signature 52 79 5.71E-17 T 23-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 PRINTS PR01182 Ornithine decarboxylase signature 126 148 5.71E-17 T 23-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 PRINTS PR01182 Ornithine decarboxylase signature 96 120 5.71E-17 T 23-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 PRINTS PR01182 Ornithine decarboxylase signature 329 339 5.71E-17 T 23-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 SUPERFAMILY SSF51419 25 273 1.38E-61 T 23-04-2016 IPR029066 PLP-binding barrel LT40_RS19760 ce3b399eba24a15a092ee7a23866199e 387 Gene3D G3DSA:2.40.37.10 256 387 1.3E-28 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 LT40_RS04220 2831cd19800d89bdba89fee9abacebdf 199 PANTHER PTHR30086:SF0 1 198 3.0E-83 T 23-04-2016 LT40_RS04220 2831cd19800d89bdba89fee9abacebdf 199 Pfam PF01810 LysE type translocator 15 197 2.0E-44 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS04220 2831cd19800d89bdba89fee9abacebdf 199 PANTHER PTHR30086 1 198 3.0E-83 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS02415 0e9afe8a47cfc27bc3d53cd7a127c76f 255 PRINTS PR01003 Flagellar assembly protein FliH signature 123 140 3.6E-5 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LT40_RS02415 0e9afe8a47cfc27bc3d53cd7a127c76f 255 PRINTS PR01003 Flagellar assembly protein FliH signature 141 163 3.6E-5 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LT40_RS02415 0e9afe8a47cfc27bc3d53cd7a127c76f 255 PRINTS PR01003 Flagellar assembly protein FliH signature 61 83 3.6E-5 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LT40_RS02415 0e9afe8a47cfc27bc3d53cd7a127c76f 255 PRINTS PR01003 Flagellar assembly protein FliH signature 190 206 3.6E-5 T 23-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 LT40_RS02415 0e9afe8a47cfc27bc3d53cd7a127c76f 255 Pfam PF02108 Flagellar assembly protein FliH 102 224 4.7E-34 T 23-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE LT40_RS02415 0e9afe8a47cfc27bc3d53cd7a127c76f 255 PANTHER PTHR34982 30 247 6.3E-61 T 23-04-2016 LT40_RS02415 0e9afe8a47cfc27bc3d53cd7a127c76f 255 PANTHER PTHR34982:SF2 30 247 6.3E-61 T 23-04-2016 LT40_RS02415 0e9afe8a47cfc27bc3d53cd7a127c76f 255 SUPERFAMILY SSF160527 151 234 3.92E-6 T 23-04-2016 LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 PANTHER PTHR24322 149 181 5.5E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 PANTHER PTHR24322 9 130 5.5E-32 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 PANTHER PTHR24322:SF343 149 181 5.5E-32 T 23-04-2016 LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 PANTHER PTHR24322:SF343 9 130 5.5E-32 T 23-04-2016 LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 Pfam PF00106 short chain dehydrogenase 5 188 2.7E-26 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 SUPERFAMILY SSF51735 5 227 1.67E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 Gene3D G3DSA:3.40.50.720 4 227 4.0E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 8.9E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 8.9E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 8.9E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 8.9E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS13260 f11688bb9891b1b61611dd73ad873e7a 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 8.9E-16 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS09570 58c08925c1f216ecf73afd4538439d4b 463 PANTHER PTHR39329:SF1 1 461 1.3E-295 T 23-04-2016 LT40_RS09570 58c08925c1f216ecf73afd4538439d4b 463 Gene3D G3DSA:3.20.20.70 142 447 9.1E-164 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS09570 58c08925c1f216ecf73afd4538439d4b 463 Gene3D G3DSA:1.10.220.70 55 141 1.9E-39 T 23-04-2016 LT40_RS09570 58c08925c1f216ecf73afd4538439d4b 463 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 442 2.1E-218 T 23-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 LT40_RS09570 58c08925c1f216ecf73afd4538439d4b 463 PANTHER PTHR39329 1 461 1.3E-295 T 23-04-2016 LT40_RS09570 58c08925c1f216ecf73afd4538439d4b 463 Gene3D G3DSA:2.30.170.30 1 54 7.0E-24 T 23-04-2016 LT40_RS09570 58c08925c1f216ecf73afd4538439d4b 463 PIRSF PIRSF018788 1 459 1.4E-236 T 23-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 Pfam PF01595 Domain of unknown function DUF21 21 208 1.8E-48 T 23-04-2016 IPR002550 Domain of unknown function DUF21 LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 SUPERFAMILY SSF54631 227 368 2.02E-26 T 23-04-2016 LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 PANTHER PTHR22777 6 446 1.7E-169 T 23-04-2016 LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 SMART SM01091 368 446 9.3E-16 T 23-04-2016 IPR005170 Transporter-associated domain LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 PANTHER PTHR22777:SF18 6 446 1.7E-169 T 23-04-2016 LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 Gene3D G3DSA:3.10.580.10 220 362 2.9E-18 T 23-04-2016 LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 Pfam PF03471 Transporter associated domain 372 443 3.0E-16 T 23-04-2016 IPR005170 Transporter-associated domain LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 Pfam PF00571 CBS domain 303 353 1.2E-5 T 23-04-2016 IPR000644 CBS domain LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 Pfam PF00571 CBS domain 238 288 5.3E-7 T 23-04-2016 IPR000644 CBS domain LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 SMART SM00116 305 353 0.24 T 23-04-2016 IPR000644 CBS domain LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 SMART SM00116 239 288 1.8E-4 T 23-04-2016 IPR000644 CBS domain LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 SUPERFAMILY SSF56176 367 445 2.73E-14 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LT40_RS16390 bd140e7c958925f6b1db759f9daaca88 446 Gene3D G3DSA:3.30.465.10 371 443 2.2E-17 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LT40_RS15725 ec22d557ee263fe88f98ff0326b831dc 260 PANTHER PTHR30477 3 260 1.1E-85 T 23-04-2016 LT40_RS15725 ec22d557ee263fe88f98ff0326b831dc 260 Pfam PF00950 ABC 3 transport family 2 256 2.9E-75 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 LT40_RS15725 ec22d557ee263fe88f98ff0326b831dc 260 PANTHER PTHR30477:SF0 3 260 1.1E-85 T 23-04-2016 LT40_RS15725 ec22d557ee263fe88f98ff0326b831dc 260 Gene3D G3DSA:1.10.3470.10 39 232 5.0E-7 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS15725 ec22d557ee263fe88f98ff0326b831dc 260 SUPERFAMILY SSF81345 3 253 7.72E-38 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS06350 8408ab5e89a5f350777f17e5cf2ed8f0 290 Gene3D G3DSA:3.10.129.10 136 252 1.2E-7 T 23-04-2016 IPR029069 HotDog domain LT40_RS06350 8408ab5e89a5f350777f17e5cf2ed8f0 290 SUPERFAMILY SSF54637 82 152 2.76E-5 T 23-04-2016 IPR029069 HotDog domain LT40_RS06350 8408ab5e89a5f350777f17e5cf2ed8f0 290 SUPERFAMILY SSF54637 170 262 5.52E-14 T 23-04-2016 IPR029069 HotDog domain LT40_RS06350 8408ab5e89a5f350777f17e5cf2ed8f0 290 PANTHER PTHR28152 16 281 5.2E-67 T 23-04-2016 LT40_RS06350 8408ab5e89a5f350777f17e5cf2ed8f0 290 Pfam PF13452 N-terminal half of MaoC dehydratase 62 137 3.3E-6 T 23-04-2016 LT40_RS02025 edc2bd2ee5c1dbe9437fbefffa867f27 341 Pfam PF08402 TOBE domain 263 335 2.2E-11 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LT40_RS02025 edc2bd2ee5c1dbe9437fbefffa867f27 341 SUPERFAMILY SSF52540 4 241 1.46E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02025 edc2bd2ee5c1dbe9437fbefffa867f27 341 PANTHER PTHR24220:SF150 5 243 2.0E-119 T 23-04-2016 LT40_RS02025 edc2bd2ee5c1dbe9437fbefffa867f27 341 PANTHER PTHR24220 5 243 2.0E-119 T 23-04-2016 LT40_RS02025 edc2bd2ee5c1dbe9437fbefffa867f27 341 SMART SM00382 28 211 4.7E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02025 edc2bd2ee5c1dbe9437fbefffa867f27 341 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS02025 edc2bd2ee5c1dbe9437fbefffa867f27 341 Pfam PF00005 ABC transporter 23 161 7.7E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS02025 edc2bd2ee5c1dbe9437fbefffa867f27 341 SUPERFAMILY SSF50331 238 338 4.68E-10 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS02025 edc2bd2ee5c1dbe9437fbefffa867f27 341 Gene3D G3DSA:3.40.50.300 3 233 4.5E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS14795 9d6f7e7062e8ba6a5245355efb21ae88 247 Pfam PF05742 Transport and Golgi organisation 2 1 232 4.4E-60 T 23-04-2016 IPR008551 Transport and Golgi organisation protein 2 LT40_RS14795 9d6f7e7062e8ba6a5245355efb21ae88 247 PANTHER PTHR17985 2 235 4.1E-69 T 23-04-2016 IPR008551 Transport and Golgi organisation protein 2 LT40_RS17110 a7600da097c4b038ae667077992687f0 263 PANTHER PTHR18966:SF189 27 257 5.7E-115 T 23-04-2016 LT40_RS17110 a7600da097c4b038ae667077992687f0 263 SUPERFAMILY SSF53850 11 260 2.67E-74 T 23-04-2016 LT40_RS17110 a7600da097c4b038ae667077992687f0 263 SMART SM00062 39 260 1.5E-80 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS17110 a7600da097c4b038ae667077992687f0 263 Gene3D G3DSA:3.40.190.10 117 220 1.0E-28 T 23-04-2016 LT40_RS17110 a7600da097c4b038ae667077992687f0 263 Gene3D G3DSA:3.40.190.10 36 116 2.0E-46 T 23-04-2016 LT40_RS17110 a7600da097c4b038ae667077992687f0 263 Gene3D G3DSA:3.40.190.10 221 261 2.0E-46 T 23-04-2016 LT40_RS17110 a7600da097c4b038ae667077992687f0 263 PANTHER PTHR18966 27 257 5.7E-115 T 23-04-2016 LT40_RS17110 a7600da097c4b038ae667077992687f0 263 SMART SM00079 39 259 5.1E-4 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LT40_RS17110 a7600da097c4b038ae667077992687f0 263 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 258 4.3E-69 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 SUPERFAMILY SSF51161 3 258 2.36E-76 T 23-04-2016 IPR011004 Trimeric LpxA-like LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 PANTHER PTHR23416:SF8 1 250 1.7E-124 T 23-04-2016 LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 PANTHER PTHR23416 1 250 1.7E-124 T 23-04-2016 LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 256 7.9E-93 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 256 2.5E-26 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 Gene3D G3DSA:2.160.10.10 3 189 8.5E-49 T 23-04-2016 LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 PIRSF PIRSF000456 1 258 1.2E-96 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 Gene3D G3DSA:1.20.1180.10 193 258 1.0E-24 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 4 32 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 6 35 9.3E-6 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 137 8.0E-8 T 23-04-2016 IPR001451 Hexapeptide repeat LT40_RS00470 2e20226cf920f25d10a895664094b38d 258 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 258 44.017 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 LT40_RS10315 26c1b17e1abef32f4b3ec648e996c196 340 Pfam PF01965 DJ-1/PfpI family 45 202 2.1E-10 T 23-04-2016 IPR002818 DJ-1/PfpI LT40_RS10315 26c1b17e1abef32f4b3ec648e996c196 340 SUPERFAMILY SSF46689 238 287 3.4E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10315 26c1b17e1abef32f4b3ec648e996c196 340 Gene3D G3DSA:1.10.10.60 290 334 2.4E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10315 26c1b17e1abef32f4b3ec648e996c196 340 Gene3D G3DSA:1.10.10.60 236 289 8.3E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10315 26c1b17e1abef32f4b3ec648e996c196 340 Gene3D G3DSA:3.40.50.880 34 219 4.9E-26 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS10315 26c1b17e1abef32f4b3ec648e996c196 340 SUPERFAMILY SSF46689 289 335 1.7E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS10315 26c1b17e1abef32f4b3ec648e996c196 340 Pfam PF12833 Helix-turn-helix domain 259 334 3.5E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10315 26c1b17e1abef32f4b3ec648e996c196 340 SMART SM00342 253 337 5.9E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LT40_RS10315 26c1b17e1abef32f4b3ec648e996c196 340 SUPERFAMILY SSF52317 34 218 2.35E-31 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS10315 26c1b17e1abef32f4b3ec648e996c196 340 PANTHER PTHR11019:SF90 101 335 1.2E-57 T 23-04-2016 LT40_RS10315 26c1b17e1abef32f4b3ec648e996c196 340 PANTHER PTHR11019 101 335 1.2E-57 T 23-04-2016 LT40_RS00150 58ac44c86bb89b0918527a58f0488980 356 PANTHER PTHR21716 6 355 1.6E-138 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like LT40_RS00150 58ac44c86bb89b0918527a58f0488980 356 PANTHER PTHR21716:SF19 6 355 1.6E-138 T 23-04-2016 LT40_RS00150 58ac44c86bb89b0918527a58f0488980 356 Pfam PF01594 Domain of unknown function DUF20 20 345 1.5E-67 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like LT40_RS09950 241c94c9dbff17d478b778818aeb5c0d 260 Gene3D G3DSA:3.20.20.150 1 255 5.7E-94 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS09950 241c94c9dbff17d478b778818aeb5c0d 260 SUPERFAMILY SSF51658 1 256 2.63E-88 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS09950 241c94c9dbff17d478b778818aeb5c0d 260 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 255 3.8E-121 T 23-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 LT40_RS09950 241c94c9dbff17d478b778818aeb5c0d 260 PANTHER PTHR12110 1 256 5.7E-100 T 23-04-2016 LT40_RS09950 241c94c9dbff17d478b778818aeb5c0d 260 PIRSF PIRSF006241 1 259 7.5E-96 T 23-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 LT40_RS09950 241c94c9dbff17d478b778818aeb5c0d 260 PANTHER PTHR12110:SF3 1 256 5.7E-100 T 23-04-2016 LT40_RS09950 241c94c9dbff17d478b778818aeb5c0d 260 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 1.7E-34 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS14365 e27edd367e6e5226325978b20fdd099f 858 PANTHER PTHR10587:SF63 471 749 1.1E-145 T 23-04-2016 LT40_RS14365 e27edd367e6e5226325978b20fdd099f 858 PANTHER PTHR10587:SF63 153 422 1.1E-145 T 23-04-2016 LT40_RS14365 e27edd367e6e5226325978b20fdd099f 858 PANTHER PTHR10587 471 749 1.1E-145 T 23-04-2016 LT40_RS14365 e27edd367e6e5226325978b20fdd099f 858 PANTHER PTHR10587 153 422 1.1E-145 T 23-04-2016 LT40_RS14365 e27edd367e6e5226325978b20fdd099f 858 SUPERFAMILY SSF53448 248 534 1.59E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS14365 e27edd367e6e5226325978b20fdd099f 858 Pfam PF00535 Glycosyl transferase family 2 250 432 3.3E-22 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS14365 e27edd367e6e5226325978b20fdd099f 858 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 70 749 52.101 T 23-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 LT40_RS17215 0e4129002f38d41174787ce5f35fe2fd 79 Pfam PF01402 Ribbon-helix-helix protein, copG family 8 40 3.3E-5 T 23-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 LT40_RS17215 0e4129002f38d41174787ce5f35fe2fd 79 SUPERFAMILY SSF47598 1 42 5.19E-7 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 LT40_RS02860 a4a696de3812f3828f27dd5611513ea0 114 PANTHER PTHR34583:SF1 1 114 1.0E-49 T 23-04-2016 LT40_RS02860 a4a696de3812f3828f27dd5611513ea0 114 PANTHER PTHR34583 1 114 1.0E-49 T 23-04-2016 LT40_RS02860 a4a696de3812f3828f27dd5611513ea0 114 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 109 1.3E-24 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 LT40_RS10645 0a7663efbebba14447a1de5f05877a2f 233 Gene3D G3DSA:1.10.3290.10 140 178 9.5E-6 T 23-04-2016 IPR003812 Fido domain LT40_RS10645 0a7663efbebba14447a1de5f05877a2f 233 SUPERFAMILY SSF140931 109 180 4.05E-7 T 23-04-2016 IPR003812 Fido domain LT40_RS15505 9ec675b6cd73b1ecdc3411983667ebdd 226 PANTHER PTHR39327 26 218 9.4E-74 T 23-04-2016 LT40_RS15505 9ec675b6cd73b1ecdc3411983667ebdd 226 PANTHER PTHR39327:SF1 26 218 9.4E-74 T 23-04-2016 LT40_RS15505 9ec675b6cd73b1ecdc3411983667ebdd 226 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 66 171 4.1E-16 T 23-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted LT40_RS15505 9ec675b6cd73b1ecdc3411983667ebdd 226 SUPERFAMILY SSF54001 55 128 6.87E-8 T 23-04-2016 LT40_RS13375 c8d71cae3e2d34312c3cc4040508596e 205 Pfam PF13590 Domain of unknown function (DUF4136) 50 204 2.3E-20 T 23-04-2016 IPR025411 Domain of unknown function DUF4136 LT40_RS13295 e70e41f02a5e75069cdf46a3c040138d 263 Gene3D G3DSA:3.40.50.300 3 238 1.9E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13295 e70e41f02a5e75069cdf46a3c040138d 263 PANTHER PTHR24220:SF438 5 254 2.1E-118 T 23-04-2016 LT40_RS13295 e70e41f02a5e75069cdf46a3c040138d 263 SMART SM00382 28 246 8.3E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS13295 e70e41f02a5e75069cdf46a3c040138d 263 Pfam PF00005 ABC transporter 20 167 8.2E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS13295 e70e41f02a5e75069cdf46a3c040138d 263 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS13295 e70e41f02a5e75069cdf46a3c040138d 263 SUPERFAMILY SSF52540 3 229 2.81E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS13295 e70e41f02a5e75069cdf46a3c040138d 263 PANTHER PTHR24220 5 254 2.1E-118 T 23-04-2016 LT40_RS08490 69acce00e8a42cf306d75fc3876653c0 138 Pfam PF01042 Endoribonuclease L-PSP 22 135 5.9E-14 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS08490 69acce00e8a42cf306d75fc3876653c0 138 SUPERFAMILY SSF55298 8 137 1.52E-25 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS08490 69acce00e8a42cf306d75fc3876653c0 138 PANTHER PTHR11803 18 138 1.3E-20 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS08490 69acce00e8a42cf306d75fc3876653c0 138 Gene3D G3DSA:3.30.1330.40 8 137 1.2E-28 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS06415 cb13cbcb1d54849af83d73a7b438a25e 275 PANTHER PTHR30043:SF1 7 273 2.5E-81 T 23-04-2016 LT40_RS06415 cb13cbcb1d54849af83d73a7b438a25e 275 Gene3D G3DSA:1.10.3720.10 67 274 3.3E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS06415 cb13cbcb1d54849af83d73a7b438a25e 275 PANTHER PTHR30043 7 273 2.5E-81 T 23-04-2016 LT40_RS06415 cb13cbcb1d54849af83d73a7b438a25e 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 272 1.9E-10 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS06415 cb13cbcb1d54849af83d73a7b438a25e 275 SUPERFAMILY SSF161098 67 266 6.02E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS19415 6617672d6d9654d01c47431d394a1d1d 85 Pfam PF01016 Ribosomal L27 protein 2 82 1.0E-36 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19415 6617672d6d9654d01c47431d394a1d1d 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.2E-34 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19415 6617672d6d9654d01c47431d394a1d1d 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.2E-34 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19415 6617672d6d9654d01c47431d394a1d1d 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.2E-34 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19415 6617672d6d9654d01c47431d394a1d1d 85 Gene3D G3DSA:2.40.50.100 20 83 7.1E-28 T 23-04-2016 LT40_RS19415 6617672d6d9654d01c47431d394a1d1d 85 SUPERFAMILY SSF110324 2 81 3.14E-32 T 23-04-2016 LT40_RS19415 6617672d6d9654d01c47431d394a1d1d 85 PANTHER PTHR15893 1 85 1.4E-46 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19415 6617672d6d9654d01c47431d394a1d1d 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19415 6617672d6d9654d01c47431d394a1d1d 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.5E-37 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19415 6617672d6d9654d01c47431d394a1d1d 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 27.686 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS19415 6617672d6d9654d01c47431d394a1d1d 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 9.0E-18 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS06565 b9bfa93b3fad35f254a0c3dd99fcbf58 318 Pfam PF01758 Sodium Bile acid symporter family 42 218 1.2E-41 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 LT40_RS06565 b9bfa93b3fad35f254a0c3dd99fcbf58 318 PANTHER PTHR10361 1 307 9.8E-89 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 LT40_RS16695 2c8e046926ceee8705f48101f27aba9c 444 PANTHER PTHR11730:SF17 24 444 3.9E-191 T 23-04-2016 LT40_RS16695 2c8e046926ceee8705f48101f27aba9c 444 Gene3D G3DSA:1.10.3430.10 29 423 3.5E-144 T 23-04-2016 IPR029020 Ammonium/urea transporter LT40_RS16695 2c8e046926ceee8705f48101f27aba9c 444 ProSitePatterns PS01219 Ammonium transporters signature. 200 225 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 LT40_RS16695 2c8e046926ceee8705f48101f27aba9c 444 Pfam PF00909 Ammonium Transporter Family 37 442 2.1E-120 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 LT40_RS16695 2c8e046926ceee8705f48101f27aba9c 444 PANTHER PTHR11730 24 444 3.9E-191 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 LT40_RS16695 2c8e046926ceee8705f48101f27aba9c 444 TIGRFAM TIGR00836 amt: ammonium transporter 35 442 3.9E-145 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 LT40_RS16695 2c8e046926ceee8705f48101f27aba9c 444 SUPERFAMILY SSF111352 31 423 2.88E-131 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 LT40_RS16585 e16d2c3b0cc1075aba8b8bdd69969ef2 430 PANTHER PTHR13847 8 429 2.5E-148 T 23-04-2016 LT40_RS16585 e16d2c3b0cc1075aba8b8bdd69969ef2 430 Pfam PF01266 FAD dependent oxidoreductase 32 384 1.2E-51 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS16585 e16d2c3b0cc1075aba8b8bdd69969ef2 430 SUPERFAMILY SSF51905 347 416 2.23E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16585 e16d2c3b0cc1075aba8b8bdd69969ef2 430 SUPERFAMILY SSF51905 31 255 2.23E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16585 e16d2c3b0cc1075aba8b8bdd69969ef2 430 Gene3D G3DSA:3.50.50.60 175 254 9.7E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16585 e16d2c3b0cc1075aba8b8bdd69969ef2 430 Gene3D G3DSA:3.50.50.60 19 121 9.7E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16585 e16d2c3b0cc1075aba8b8bdd69969ef2 430 Gene3D G3DSA:3.50.50.60 347 394 9.7E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS16585 e16d2c3b0cc1075aba8b8bdd69969ef2 430 PANTHER PTHR13847:SF196 8 429 2.5E-148 T 23-04-2016 LT40_RS08565 afcdc56da2164e1c9da43c35ddbd115b 402 Pfam PF00589 Phage integrase family 189 368 7.5E-18 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS08565 afcdc56da2164e1c9da43c35ddbd115b 402 SUPERFAMILY SSF56349 83 371 1.03E-51 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LT40_RS08565 afcdc56da2164e1c9da43c35ddbd115b 402 Gene3D G3DSA:1.10.443.10 185 372 1.6E-29 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS08565 afcdc56da2164e1c9da43c35ddbd115b 402 PANTHER PTHR30349 86 401 2.9E-29 T 23-04-2016 LT40_RS08565 afcdc56da2164e1c9da43c35ddbd115b 402 Gene3D G3DSA:1.10.150.130 83 179 2.6E-8 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal LT40_RS08565 afcdc56da2164e1c9da43c35ddbd115b 402 Pfam PF12167 Domain of unknown function (DUF3596) 9 74 1.1E-11 T 23-04-2016 IPR022000 Domain of unknown function (DUF3596) LT40_RS04395 f686653bd6fb2b2e7af696283e9411ca 298 PANTHER PTHR22911:SF70 11 293 4.0E-103 T 23-04-2016 LT40_RS04395 f686653bd6fb2b2e7af696283e9411ca 298 SUPERFAMILY SSF103481 196 294 6.8E-12 T 23-04-2016 LT40_RS04395 f686653bd6fb2b2e7af696283e9411ca 298 SUPERFAMILY SSF103481 53 153 5.23E-15 T 23-04-2016 LT40_RS04395 f686653bd6fb2b2e7af696283e9411ca 298 PANTHER PTHR22911 11 293 4.0E-103 T 23-04-2016 LT40_RS04395 f686653bd6fb2b2e7af696283e9411ca 298 Pfam PF00892 EamA-like transporter family 159 283 5.7E-8 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS04395 f686653bd6fb2b2e7af696283e9411ca 298 Pfam PF00892 EamA-like transporter family 16 149 6.7E-14 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS06330 767c8fd062bd91d0a922a839451f384b 274 Gene3D G3DSA:3.20.20.60 5 226 1.8E-64 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS06330 767c8fd062bd91d0a922a839451f384b 274 PIRSF PIRSF015582 1 274 3.0E-73 T 23-04-2016 IPR011206 Citrate lyase beta subunit-like LT40_RS06330 767c8fd062bd91d0a922a839451f384b 274 SUPERFAMILY SSF51621 3 226 5.23E-55 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LT40_RS06330 767c8fd062bd91d0a922a839451f384b 274 PANTHER PTHR32308 6 274 1.0E-69 T 23-04-2016 IPR011206 Citrate lyase beta subunit-like LT40_RS06330 767c8fd062bd91d0a922a839451f384b 274 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 214 9.2E-28 T 23-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 LT40_RS17965 eaa8ab90f5653f58cedf80ab9c17d8e3 83 Pfam PF13560 Helix-turn-helix domain 9 63 6.4E-9 T 23-04-2016 LT40_RS17965 eaa8ab90f5653f58cedf80ab9c17d8e3 83 SUPERFAMILY SSF47413 6 67 2.95E-13 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS17965 eaa8ab90f5653f58cedf80ab9c17d8e3 83 Gene3D G3DSA:1.10.260.40 4 67 8.6E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LT40_RS17965 eaa8ab90f5653f58cedf80ab9c17d8e3 83 SMART SM00530 13 68 5.3E-9 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 PANTHER PTHR32114 807 1210 3.1E-121 T 23-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 PANTHER PTHR32114 2 545 3.1E-121 T 23-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 PANTHER PTHR32114 562 736 3.1E-121 T 23-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 Gene3D G3DSA:3.40.50.300 1109 1190 1.9E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 Pfam PF13555 P-loop containing region of AAA domain 30 58 1.8E-6 T 23-04-2016 LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 Gene3D G3DSA:3.40.50.300 1 178 7.1E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 SUPERFAMILY SSF52540 300 408 3.23E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 SUPERFAMILY SSF52540 1 234 3.23E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 SUPERFAMILY SSF52540 1 58 3.47E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 SUPERFAMILY SSF52540 968 1187 3.47E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1109 1168 4.1E-12 T 23-04-2016 LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 PANTHER PTHR32114:SF2 807 1210 3.1E-121 T 23-04-2016 LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 PANTHER PTHR32114:SF2 2 545 3.1E-121 T 23-04-2016 LT40_RS01735 1e5237451b93121ae57121df0024f9f0 1210 PANTHER PTHR32114:SF2 562 736 3.1E-121 T 23-04-2016 LT40_RS00710 04de5872b882ce49563507d47849b256 246 PANTHER PTHR24322:SF635 10 138 2.6E-70 T 23-04-2016 LT40_RS00710 04de5872b882ce49563507d47849b256 246 PANTHER PTHR24322:SF635 154 186 2.6E-70 T 23-04-2016 LT40_RS00710 04de5872b882ce49563507d47849b256 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 3.3E-99 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 LT40_RS00710 04de5872b882ce49563507d47849b256 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 7.0E-64 T 23-04-2016 LT40_RS00710 04de5872b882ce49563507d47849b256 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.0E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS00710 04de5872b882ce49563507d47849b256 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 7.0E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS00710 04de5872b882ce49563507d47849b256 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.0E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS00710 04de5872b882ce49563507d47849b256 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.0E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS00710 04de5872b882ce49563507d47849b256 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.0E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS00710 04de5872b882ce49563507d47849b256 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.0E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS00710 04de5872b882ce49563507d47849b256 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS00710 04de5872b882ce49563507d47849b256 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.5E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS00710 04de5872b882ce49563507d47849b256 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.5E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS00710 04de5872b882ce49563507d47849b256 246 SUPERFAMILY SSF51735 4 246 9.19E-82 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS00710 04de5872b882ce49563507d47849b256 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LT40_RS00710 04de5872b882ce49563507d47849b256 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 8.7E-6 T 23-04-2016 LT40_RS00710 04de5872b882ce49563507d47849b256 246 PANTHER PTHR24322 10 138 2.6E-70 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS00710 04de5872b882ce49563507d47849b256 246 PANTHER PTHR24322 154 186 2.6E-70 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR LT40_RS00710 04de5872b882ce49563507d47849b256 246 Gene3D G3DSA:3.40.50.720 1 245 5.3E-86 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS05855 b1d2b4bd2de37f3b09506e6038b60ec5 248 SUPERFAMILY SSF56529 4 246 1.96E-36 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS05855 b1d2b4bd2de37f3b09506e6038b60ec5 248 PANTHER PTHR30143 2 246 5.1E-25 T 23-04-2016 LT40_RS05855 b1d2b4bd2de37f3b09506e6038b60ec5 248 Gene3D G3DSA:3.90.850.10 3 246 2.7E-41 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS05855 b1d2b4bd2de37f3b09506e6038b60ec5 248 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 85 244 3.5E-14 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS17825 f2a2c9169400266df23542fe98c4dc34 423 PANTHER PTHR23417 1 113 9.0E-127 T 23-04-2016 LT40_RS17825 f2a2c9169400266df23542fe98c4dc34 423 PANTHER PTHR23417 132 142 9.0E-127 T 23-04-2016 LT40_RS17825 f2a2c9169400266df23542fe98c4dc34 423 PANTHER PTHR23417 192 420 9.0E-127 T 23-04-2016 LT40_RS17825 f2a2c9169400266df23542fe98c4dc34 423 SUPERFAMILY SSF53756 57 418 3.01E-11 T 23-04-2016 LT40_RS17825 f2a2c9169400266df23542fe98c4dc34 423 PANTHER PTHR23417:SF2 1 113 9.0E-127 T 23-04-2016 LT40_RS17825 f2a2c9169400266df23542fe98c4dc34 423 PANTHER PTHR23417:SF2 132 142 9.0E-127 T 23-04-2016 LT40_RS17825 f2a2c9169400266df23542fe98c4dc34 423 PANTHER PTHR23417:SF2 192 420 9.0E-127 T 23-04-2016 LT40_RS17825 f2a2c9169400266df23542fe98c4dc34 423 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 2.1E-65 T 23-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 LT40_RS17825 f2a2c9169400266df23542fe98c4dc34 423 Pfam PF00534 Glycosyl transferases group 1 300 400 6.6E-8 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS09660 bd597d0625717737c6da5a8d05538c60 239 PIRSF PIRSF000851 3 238 5.6E-87 T 23-04-2016 IPR026027 Phosphatidylcholine synthase Pcs KEGG: 00564+2.7.8.24|MetaCyc: PWY-6826 LT40_RS09660 bd597d0625717737c6da5a8d05538c60 239 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 68 5.7E-7 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LT40_RS17910 d7b798b29f66ae6a65d817b709520b30 237 Pfam PF08889 WbqC-like protein family 9 228 6.8E-65 T 23-04-2016 IPR014985 WbqC-like protein family LT40_RS17815 9b6a02d5835456566b79be8434ede982 393 SUPERFAMILY SSF51905 7 224 1.3E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17815 9b6a02d5835456566b79be8434ede982 393 SUPERFAMILY SSF51905 252 303 1.3E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS17815 9b6a02d5835456566b79be8434ede982 393 Pfam PF01266 FAD dependent oxidoreductase 8 342 1.2E-17 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS17815 9b6a02d5835456566b79be8434ede982 393 Gene3D G3DSA:3.50.50.60 4 237 1.4E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10665 75a3ef6762aa34402a05aa23684ba9ce 343 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 30 342 2.0E-128 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 LT40_RS10665 75a3ef6762aa34402a05aa23684ba9ce 343 SUPERFAMILY SSF53850 30 342 3.14E-92 T 23-04-2016 LT40_RS10665 75a3ef6762aa34402a05aa23684ba9ce 343 PANTHER PTHR30570 12 343 2.5E-111 T 23-04-2016 LT40_RS10665 75a3ef6762aa34402a05aa23684ba9ce 343 Gene3D G3DSA:3.40.190.10 28 173 3.6E-48 T 23-04-2016 LT40_RS10665 75a3ef6762aa34402a05aa23684ba9ce 343 PANTHER PTHR30570:SF0 12 343 2.5E-111 T 23-04-2016 LT40_RS10665 75a3ef6762aa34402a05aa23684ba9ce 343 Gene3D G3DSA:3.40.190.10 189 338 2.6E-26 T 23-04-2016 LT40_RS10665 75a3ef6762aa34402a05aa23684ba9ce 343 Pfam PF12849 PBP superfamily domain 25 313 8.3E-63 T 23-04-2016 IPR024370 PBP domain LT40_RS10665 75a3ef6762aa34402a05aa23684ba9ce 343 PIRSF PIRSF002756 1 343 8.5E-105 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 LT40_RS17370 6fb1c9b2c24acb4fe04f78a2bcca318d 166 PANTHER PTHR30399 1 164 2.7E-92 T 23-04-2016 LT40_RS17370 6fb1c9b2c24acb4fe04f78a2bcca318d 166 Pfam PF01863 Protein of unknown function DUF45 93 154 9.7E-13 T 23-04-2016 IPR002725 Protein of unknown function DUF45 LT40_RS17370 6fb1c9b2c24acb4fe04f78a2bcca318d 166 PANTHER PTHR30399:SF4 1 164 2.7E-92 T 23-04-2016 LT40_RS03310 debb9532956a811f439cd07db591c4bf 169 Pfam PF02600 Disulfide bond formation protein DsbB 13 158 3.3E-37 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 LT40_RS03310 debb9532956a811f439cd07db591c4bf 169 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 8 168 19.466 T 23-04-2016 IPR022920 Disulphide bond formation protein DsbB LT40_RS03310 debb9532956a811f439cd07db591c4bf 169 PANTHER PTHR36570 1 169 1.5E-18 T 23-04-2016 LT40_RS03310 debb9532956a811f439cd07db591c4bf 169 Gene3D G3DSA:1.20.1550.10 8 167 6.3E-50 T 23-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain LT40_RS03310 debb9532956a811f439cd07db591c4bf 169 SUPERFAMILY SSF158442 16 158 1.2E-36 T 23-04-2016 LT40_RS04740 987d848fe0c83a543c9c898fc5cf00eb 368 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 200 360 4.3E-41 T 23-04-2016 IPR000160 GGDEF domain LT40_RS04740 987d848fe0c83a543c9c898fc5cf00eb 368 PANTHER PTHR10799 237 358 1.0E-23 T 23-04-2016 LT40_RS04740 987d848fe0c83a543c9c898fc5cf00eb 368 SMART SM00267 193 362 9.4E-54 T 23-04-2016 IPR000160 GGDEF domain LT40_RS04740 987d848fe0c83a543c9c898fc5cf00eb 368 Pfam PF00990 Diguanylate cyclase, GGDEF domain 205 358 5.8E-42 T 23-04-2016 IPR000160 GGDEF domain LT40_RS04740 987d848fe0c83a543c9c898fc5cf00eb 368 Gene3D G3DSA:3.30.70.270 206 361 4.4E-49 T 23-04-2016 LT40_RS04740 987d848fe0c83a543c9c898fc5cf00eb 368 SUPERFAMILY SSF55073 209 360 1.88E-45 T 23-04-2016 IPR029787 Nucleotide cyclase LT40_RS02545 6f5d1fafc9599e7f98c2d23782ec3c4f 288 Pfam PF01584 CheW-like domain 128 259 6.1E-13 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS02545 6f5d1fafc9599e7f98c2d23782ec3c4f 288 SMART SM00260 124 259 4.8E-16 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS02545 6f5d1fafc9599e7f98c2d23782ec3c4f 288 SUPERFAMILY SSF50341 125 260 3.4E-15 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 LT40_RS15460 3aafeb128367f70003b2ab463191de7b 296 PANTHER PTHR30367 9 285 2.8E-88 T 23-04-2016 LT40_RS15460 3aafeb128367f70003b2ab463191de7b 296 Gene3D G3DSA:2.40.50.100 153 185 6.3E-16 T 23-04-2016 LT40_RS15460 3aafeb128367f70003b2ab463191de7b 296 Gene3D G3DSA:2.40.50.100 48 80 6.3E-16 T 23-04-2016 LT40_RS15460 3aafeb128367f70003b2ab463191de7b 296 Pfam PF13533 Biotin-lipoyl like 48 93 6.0E-18 T 23-04-2016 LT40_RS15460 3aafeb128367f70003b2ab463191de7b 296 Pfam PF13437 HlyD family secretion protein 155 237 1.6E-11 T 23-04-2016 LT40_RS15460 3aafeb128367f70003b2ab463191de7b 296 PANTHER PTHR30367:SF5 9 285 2.8E-88 T 23-04-2016 LT40_RS15460 3aafeb128367f70003b2ab463191de7b 296 SUPERFAMILY SSF111369 46 185 1.44E-20 T 23-04-2016 LT40_RS15460 3aafeb128367f70003b2ab463191de7b 296 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 236 1.3E-32 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 LT40_RS00080 e8e204644977dc0d936de8a063d1506d 130 PANTHER PTHR36530:SF2 1 130 8.5E-23 T 23-04-2016 LT40_RS00080 e8e204644977dc0d936de8a063d1506d 130 PANTHER PTHR36530 1 130 8.5E-23 T 23-04-2016 LT40_RS00080 e8e204644977dc0d936de8a063d1506d 130 SUPERFAMILY SSF141066 28 130 4.05E-29 T 23-04-2016 IPR018990 Proteinase inhibitor I42, chagasin LT40_RS00080 e8e204644977dc0d936de8a063d1506d 130 Pfam PF09394 Chagasin family peptidase inhibitor I42 37 126 1.7E-21 T 23-04-2016 IPR018990 Proteinase inhibitor I42, chagasin LT40_RS03950 463bff4cbb3641366b831b5d08605a7b 242 Gene3D G3DSA:1.20.5.100 213 242 6.5E-9 T 23-04-2016 LT40_RS03950 463bff4cbb3641366b831b5d08605a7b 242 Pfam PF02167 Cytochrome C1 family 34 241 9.3E-13 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 LT40_RS03950 463bff4cbb3641366b831b5d08605a7b 242 Gene3D G3DSA:1.10.760.10 21 207 3.0E-49 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS03950 463bff4cbb3641366b831b5d08605a7b 242 PANTHER PTHR10266 35 162 1.5E-36 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 LT40_RS03950 463bff4cbb3641366b831b5d08605a7b 242 PANTHER PTHR10266 181 241 1.5E-36 T 23-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 LT40_RS03950 463bff4cbb3641366b831b5d08605a7b 242 SUPERFAMILY SSF46626 30 205 1.41E-37 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 LT40_RS06690 c290cc33795336c0f55e5ef7d4bffd80 215 SUPERFAMILY SSF55469 13 212 1.24E-45 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 LT40_RS06690 c290cc33795336c0f55e5ef7d4bffd80 215 Gene3D G3DSA:3.40.109.10 6 213 2.1E-45 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 LT40_RS06690 c290cc33795336c0f55e5ef7d4bffd80 215 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 5 206 1.3E-73 T 23-04-2016 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 LT40_RS06690 c290cc33795336c0f55e5ef7d4bffd80 215 Pfam PF00881 Nitroreductase family 17 180 2.1E-26 T 23-04-2016 IPR029479 Nitroreductase LT40_RS06690 c290cc33795336c0f55e5ef7d4bffd80 215 PANTHER PTHR21712 1 211 4.9E-85 T 23-04-2016 LT40_RS06690 c290cc33795336c0f55e5ef7d4bffd80 215 PANTHER PTHR21712:SF31 1 211 4.9E-85 T 23-04-2016 LT40_RS05860 c9818e32fb06b9fd010d2e13e09aaa0b 97 Gene3D G3DSA:1.25.40.10 36 94 4.0E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS01125 9e937ab5929b590e65a020e9c30dd942 334 PANTHER PTHR10289 3 333 3.5E-160 T 23-04-2016 LT40_RS01125 9e937ab5929b590e65a020e9c30dd942 334 Gene3D G3DSA:3.90.1150.10 248 332 4.8E-23 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS01125 9e937ab5929b590e65a020e9c30dd942 334 SUPERFAMILY SSF53383 4 333 9.9E-116 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS01125 9e937ab5929b590e65a020e9c30dd942 334 Pfam PF01212 Beta-eliminating lyase 5 283 3.1E-96 T 23-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 LT40_RS01125 9e937ab5929b590e65a020e9c30dd942 334 Gene3D G3DSA:3.40.640.10 2 247 9.1E-88 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS01125 9e937ab5929b590e65a020e9c30dd942 334 PIRSF PIRSF017617 1 334 1.2E-132 T 23-04-2016 IPR023603 Threonine aldolase LT40_RS01125 9e937ab5929b590e65a020e9c30dd942 334 PANTHER PTHR10289:SF5 3 333 3.5E-160 T 23-04-2016 LT40_RS19985 8c66f7b339572ea4be4c198d19ab53e8 624 Pfam PF06980 Protein of unknown function (DUF1302) 30 624 9.7E-215 T 23-04-2016 IPR010727 Protein of unknown function DUF1302 LT40_RS07940 96662424be39c27f55b1faaaf069be4e 112 Pfam PF12840 Helix-turn-helix domain 6 79 1.1E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07940 96662424be39c27f55b1faaaf069be4e 112 SUPERFAMILY SSF46785 4 99 1.98E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07940 96662424be39c27f55b1faaaf069be4e 112 SMART SM00418 6 100 3.6E-5 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS07940 96662424be39c27f55b1faaaf069be4e 112 Gene3D G3DSA:1.10.10.10 3 100 5.8E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS07940 96662424be39c27f55b1faaaf069be4e 112 PANTHER PTHR33154 43 109 2.9E-13 T 23-04-2016 LT40_RS07940 96662424be39c27f55b1faaaf069be4e 112 PANTHER PTHR33154 6 26 2.9E-13 T 23-04-2016 LT40_RS15745 fc016d5b33854253513589f4b20d9e9e 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 223 8.6E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15745 fc016d5b33854253513589f4b20d9e9e 223 PANTHER PTHR30450 1 223 6.7E-121 T 23-04-2016 LT40_RS15745 fc016d5b33854253513589f4b20d9e9e 223 Gene3D G3DSA:1.10.3720.10 12 218 3.1E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15745 fc016d5b33854253513589f4b20d9e9e 223 SUPERFAMILY SSF161098 12 207 3.14E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS15745 fc016d5b33854253513589f4b20d9e9e 223 PANTHER PTHR30450:SF1 1 223 6.7E-121 T 23-04-2016 LT40_RS07875 93c1a01259e7a27288aa2a2c71ec09a8 293 Pfam PF00144 Beta-lactamase 23 256 3.7E-35 T 23-04-2016 IPR001466 Beta-lactamase-related LT40_RS07875 93c1a01259e7a27288aa2a2c71ec09a8 293 Gene3D G3DSA:3.40.710.10 23 256 3.2E-40 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS07875 93c1a01259e7a27288aa2a2c71ec09a8 293 SUPERFAMILY SSF56601 21 256 9.46E-43 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like LT40_RS07875 93c1a01259e7a27288aa2a2c71ec09a8 293 PANTHER PTHR22935 24 151 1.2E-24 T 23-04-2016 LT40_RS04250 cf656e089230c18e32c77b9502fe553a 100 Gene3D G3DSA:1.10.10.10 4 97 1.4E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04250 cf656e089230c18e32c77b9502fe553a 100 SMART SM00418 7 98 4.9E-13 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LT40_RS04250 cf656e089230c18e32c77b9502fe553a 100 PANTHER PTHR33154 3 96 1.8E-22 T 23-04-2016 LT40_RS04250 cf656e089230c18e32c77b9502fe553a 100 Pfam PF12840 Helix-turn-helix domain 6 78 2.2E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS04250 cf656e089230c18e32c77b9502fe553a 100 SUPERFAMILY SSF46785 3 96 2.32E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS16855 14034d46436c10b9b6491fd42ea76efb 221 Gene3D G3DSA:1.10.3720.10 13 216 4.1E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16855 14034d46436c10b9b6491fd42ea76efb 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 216 3.0E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16855 14034d46436c10b9b6491fd42ea76efb 221 PANTHER PTHR30614 1 219 9.4E-76 T 23-04-2016 LT40_RS16855 14034d46436c10b9b6491fd42ea76efb 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 111 3.1E-29 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LT40_RS16855 14034d46436c10b9b6491fd42ea76efb 221 SUPERFAMILY SSF161098 15 214 5.23E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16855 14034d46436c10b9b6491fd42ea76efb 221 PANTHER PTHR30614:SF18 1 219 9.4E-76 T 23-04-2016 LT40_RS09045 031140988a3fbed2c70caa2aeecf65c0 109 Pfam PF07119 Protein of unknown function (DUF1375) 7 95 1.5E-20 T 23-04-2016 IPR010780 Protein of unknown function DUF1375 LT40_RS07305 b26947244c9ff6b9bb6eee0d2ebd15d4 158 Pfam PF03846 Cell division inhibitor SulA 42 130 2.9E-8 T 23-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 LT40_RS07305 b26947244c9ff6b9bb6eee0d2ebd15d4 158 Gene3D G3DSA:3.40.50.300 42 156 1.1E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS07305 b26947244c9ff6b9bb6eee0d2ebd15d4 158 SUPERFAMILY SSF52540 42 156 7.43E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02215 7ba5e1a964166594ec46173c527dbbd4 367 PANTHER PTHR12169:SF11 3 358 1.1E-107 T 23-04-2016 LT40_RS02215 7ba5e1a964166594ec46173c527dbbd4 367 PANTHER PTHR12169 3 358 1.1E-107 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 LT40_RS02215 7ba5e1a964166594ec46173c527dbbd4 367 Pfam PF03969 AFG1-like ATPase 65 358 2.3E-96 T 23-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 LT40_RS02215 7ba5e1a964166594ec46173c527dbbd4 367 Gene3D G3DSA:3.40.50.300 62 182 4.1E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02215 7ba5e1a964166594ec46173c527dbbd4 367 SUPERFAMILY SSF52540 65 185 2.41E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS06520 eefed3912e3879a3dde3216635c54af9 126 Gene3D G3DSA:3.30.1330.40 21 126 1.1E-29 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS06520 eefed3912e3879a3dde3216635c54af9 126 Pfam PF01042 Endoribonuclease L-PSP 28 124 1.1E-21 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS06520 eefed3912e3879a3dde3216635c54af9 126 SUPERFAMILY SSF55298 22 125 5.65E-28 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like LT40_RS06520 eefed3912e3879a3dde3216635c54af9 126 PANTHER PTHR11803 32 126 2.3E-26 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family LT40_RS09440 eb54446ebeed91fe133ab9375106c531 311 Pfam PF01380 SIS domain 139 263 3.2E-13 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 LT40_RS09440 eb54446ebeed91fe133ab9375106c531 311 Gene3D G3DSA:1.10.10.10 13 85 1.7E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09440 eb54446ebeed91fe133ab9375106c531 311 SUPERFAMILY SSF53697 113 265 2.43E-23 T 23-04-2016 LT40_RS09440 eb54446ebeed91fe133ab9375106c531 311 PANTHER PTHR30514:SF3 12 264 3.1E-26 T 23-04-2016 LT40_RS09440 eb54446ebeed91fe133ab9375106c531 311 Pfam PF01418 Helix-turn-helix domain, rpiR family 14 85 4.3E-10 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LT40_RS09440 eb54446ebeed91fe133ab9375106c531 311 Gene3D G3DSA:3.40.50.10490 111 250 2.4E-20 T 23-04-2016 LT40_RS09440 eb54446ebeed91fe133ab9375106c531 311 SUPERFAMILY SSF46689 13 85 9.85E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS09440 eb54446ebeed91fe133ab9375106c531 311 PANTHER PTHR30514 12 264 3.1E-26 T 23-04-2016 LT40_RS11340 fa15fb4f9abcdea6d6844d003b2a7e53 141 PANTHER PTHR13355:SF8 14 139 2.5E-29 T 23-04-2016 LT40_RS11340 fa15fb4f9abcdea6d6844d003b2a7e53 141 Pfam PF13673 Acetyltransferase (GNAT) domain 24 138 1.2E-19 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS11340 fa15fb4f9abcdea6d6844d003b2a7e53 141 PANTHER PTHR13355 14 139 2.5E-29 T 23-04-2016 LT40_RS11340 fa15fb4f9abcdea6d6844d003b2a7e53 141 SUPERFAMILY SSF55729 4 139 8.89E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS11340 fa15fb4f9abcdea6d6844d003b2a7e53 141 Gene3D G3DSA:3.40.630.30 13 138 3.7E-36 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS04680 ae44187ab36aa76cb02c758131b61a9f 113 Gene3D G3DSA:1.20.1260.10 25 111 2.4E-24 T 23-04-2016 IPR012347 Ferritin-related LT40_RS04680 ae44187ab36aa76cb02c758131b61a9f 113 Pfam PF03713 Domain of unknown function (DUF305) 24 107 3.6E-19 T 23-04-2016 IPR005183 Domain of unknown function DUF305 LT40_RS04680 ae44187ab36aa76cb02c758131b61a9f 113 PANTHER PTHR36933:SF1 28 110 3.2E-15 T 23-04-2016 LT40_RS04680 ae44187ab36aa76cb02c758131b61a9f 113 PANTHER PTHR36933 28 110 3.2E-15 T 23-04-2016 LT40_RS07625 9e2ab2b0dd39016f12340920b072d94e 1020 Pfam PF07520 Virulence factor SrfB 1 1017 0.0 T 23-04-2016 IPR009216 Virulence factor SrfB LT40_RS07625 9e2ab2b0dd39016f12340920b072d94e 1020 PIRSF PIRSF034585 1 1020 0.0 T 23-04-2016 IPR009216 Virulence factor SrfB LT40_RS07625 9e2ab2b0dd39016f12340920b072d94e 1020 SUPERFAMILY SSF53067 678 805 5.65E-6 T 23-04-2016 LT40_RS07625 9e2ab2b0dd39016f12340920b072d94e 1020 SUPERFAMILY SSF53067 562 628 5.65E-6 T 23-04-2016 LT40_RS18965 b34937006c0246fbaae135402beee820 145 PANTHER PTHR30353:SF12 1 143 2.8E-49 T 23-04-2016 LT40_RS18965 b34937006c0246fbaae135402beee820 145 Pfam PF09335 SNARE associated Golgi protein 27 139 4.5E-12 T 23-04-2016 IPR032816 SNARE associated Golgi protein LT40_RS18965 b34937006c0246fbaae135402beee820 145 PANTHER PTHR30353 1 143 2.8E-49 T 23-04-2016 IPR032818 DedA family LT40_RS18965 b34937006c0246fbaae135402beee820 145 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 38 116 0.008 T 23-04-2016 IPR020143 Uncharacterised protein family, RP436 LT40_RS18840 3d9c79f372b46b220529555354024c7a 343 PIRSF PIRSF005963 13 343 6.0E-129 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LT40_RS18840 3d9c79f372b46b220529555354024c7a 343 SMART SM00729 105 311 2.7E-15 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 LT40_RS18840 3d9c79f372b46b220529555354024c7a 343 SUPERFAMILY SSF102114 71 341 1.83E-67 T 23-04-2016 LT40_RS18840 3d9c79f372b46b220529555354024c7a 343 TIGRFAM TIGR00510 lipA: lipoyl synthase 53 337 6.8E-129 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LT40_RS18840 3d9c79f372b46b220529555354024c7a 343 Pfam PF04055 Radical SAM superfamily 112 271 5.0E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 LT40_RS18840 3d9c79f372b46b220529555354024c7a 343 PANTHER PTHR10949 32 342 1.5E-167 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LT40_RS18840 3d9c79f372b46b220529555354024c7a 343 Gene3D G3DSA:3.20.20.70 73 336 3.5E-70 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS18840 3d9c79f372b46b220529555354024c7a 343 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 58 94 1.9E-7 T 23-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LT40_RS18840 3d9c79f372b46b220529555354024c7a 343 Hamap MF_00206 Lipoyl synthase [lipA]. 57 343 152.611 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 LT40_RS05810 b4996ddee1577c87397c525c180164dd 278 PANTHER PTHR33969:SF2 30 278 1.4E-91 T 23-04-2016 LT40_RS05810 b4996ddee1577c87397c525c180164dd 278 Hamap MF_01805 Segregation and condensation protein A [scpA]. 46 276 21.462 T 23-04-2016 IPR003768 Segregation and condensation protein A LT40_RS05810 b4996ddee1577c87397c525c180164dd 278 Pfam PF02616 Segregation and condensation protein ScpA 63 272 4.8E-28 T 23-04-2016 IPR003768 Segregation and condensation protein A LT40_RS05810 b4996ddee1577c87397c525c180164dd 278 PANTHER PTHR33969 30 278 1.4E-91 T 23-04-2016 LT40_RS20390 defb8a8d16e5aec8a197e0c25ca2f894 120 SUPERFAMILY SSF52172 1 86 4.13E-10 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS20390 defb8a8d16e5aec8a197e0c25ca2f894 120 Gene3D G3DSA:3.40.50.2300 2 86 2.0E-8 T 23-04-2016 LT40_RS20390 defb8a8d16e5aec8a197e0c25ca2f894 120 Pfam PF00072 Response regulator receiver domain 6 73 7.4E-5 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS18630 f281aa9d446b9022064f2fc903a7470a 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 139 7.3E-24 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LT40_RS18630 f281aa9d446b9022064f2fc903a7470a 345 Pfam PF00107 Zinc-binding dehydrogenase 180 300 3.2E-14 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LT40_RS18630 f281aa9d446b9022064f2fc903a7470a 345 SUPERFAMILY SSF50129 15 166 3.3E-44 T 23-04-2016 IPR011032 GroES-like LT40_RS18630 f281aa9d446b9022064f2fc903a7470a 345 PANTHER PTHR11695 18 344 3.7E-105 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 LT40_RS18630 f281aa9d446b9022064f2fc903a7470a 345 SMART SM00829 16 335 2.3E-5 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LT40_RS18630 f281aa9d446b9022064f2fc903a7470a 345 SUPERFAMILY SSF51735 144 305 1.25E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18630 f281aa9d446b9022064f2fc903a7470a 345 PANTHER PTHR11695:SF261 18 344 3.7E-105 T 23-04-2016 LT40_RS18630 f281aa9d446b9022064f2fc903a7470a 345 Gene3D G3DSA:3.90.180.10 7 173 5.2E-56 T 23-04-2016 IPR011032 GroES-like LT40_RS18630 f281aa9d446b9022064f2fc903a7470a 345 Gene3D G3DSA:3.40.50.720 174 283 9.8E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain LT40_RS18630 f281aa9d446b9022064f2fc903a7470a 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 65 79 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 LT40_RS02030 16273d531e4495426784d78980ba2d73 283 SUPERFAMILY SSF46785 21 93 1.64E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02030 16273d531e4495426784d78980ba2d73 283 PANTHER PTHR30136 1 278 5.9E-51 T 23-04-2016 LT40_RS02030 16273d531e4495426784d78980ba2d73 283 SUPERFAMILY SSF55781 87 267 5.76E-37 T 23-04-2016 IPR029016 GAF domain-like LT40_RS02030 16273d531e4495426784d78980ba2d73 283 Pfam PF01614 Bacterial transcriptional regulator 161 262 1.9E-13 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal LT40_RS02030 16273d531e4495426784d78980ba2d73 283 PANTHER PTHR30136:SF3 1 278 5.9E-51 T 23-04-2016 LT40_RS02030 16273d531e4495426784d78980ba2d73 283 Gene3D G3DSA:3.30.450.40 90 267 2.1E-38 T 23-04-2016 IPR029016 GAF domain-like LT40_RS02030 16273d531e4495426784d78980ba2d73 283 SMART SM00346 21 112 2.8E-14 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS02030 16273d531e4495426784d78980ba2d73 283 Pfam PF09339 IclR helix-turn-helix domain 23 74 1.1E-12 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 LT40_RS02030 16273d531e4495426784d78980ba2d73 283 Gene3D G3DSA:1.10.10.10 18 89 7.1E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02020 e975db89a6a9ad1498f3638dcc2fb93c 281 PANTHER PTHR30193 5 281 5.0E-94 T 23-04-2016 LT40_RS02020 e975db89a6a9ad1498f3638dcc2fb93c 281 PANTHER PTHR30193:SF32 5 281 5.0E-94 T 23-04-2016 LT40_RS02020 e975db89a6a9ad1498f3638dcc2fb93c 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 265 5.4E-8 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02020 e975db89a6a9ad1498f3638dcc2fb93c 281 SUPERFAMILY SSF161098 4 270 1.03E-54 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02020 e975db89a6a9ad1498f3638dcc2fb93c 281 Gene3D G3DSA:1.10.3720.10 7 273 1.5E-55 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS08345 29bb2f0c7c7c171d3690ba370c0377e5 99 Pfam PF07007 Protein of unknown function (DUF1311) 5 90 6.3E-18 T 23-04-2016 IPR009739 Protein of unknown function DUF1311 LT40_RS08345 29bb2f0c7c7c171d3690ba370c0377e5 99 PANTHER PTHR39176 5 95 8.8E-13 T 23-04-2016 LT40_RS17355 5d7fdbd9ab48e12b81faee5c1b40b2e0 108 SUPERFAMILY SSF141488 26 106 3.66E-14 T 23-04-2016 IPR018660 C-type lysozyme, inhibitor LT40_RS17355 5d7fdbd9ab48e12b81faee5c1b40b2e0 108 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 32 99 1.1E-10 T 23-04-2016 IPR018660 C-type lysozyme, inhibitor LT40_RS00260 d5bc302cdcebd7c6ae850fa6d0d1093a 523 PANTHER PTHR11686:SF8 5 520 3.6E-115 T 23-04-2016 LT40_RS00260 d5bc302cdcebd7c6ae850fa6d0d1093a 523 PANTHER PTHR11686 5 520 3.6E-115 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS00260 d5bc302cdcebd7c6ae850fa6d0d1093a 523 Pfam PF01019 Gamma-glutamyltranspeptidase 23 516 4.9E-94 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS00260 d5bc302cdcebd7c6ae850fa6d0d1093a 523 SUPERFAMILY SSF56235 4 520 9.84E-122 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal LT40_RS00260 d5bc302cdcebd7c6ae850fa6d0d1093a 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 213 229 4.8E-16 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS00260 d5bc302cdcebd7c6ae850fa6d0d1093a 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 359 377 4.8E-16 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS00260 d5bc302cdcebd7c6ae850fa6d0d1093a 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 390 405 4.8E-16 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS00260 d5bc302cdcebd7c6ae850fa6d0d1093a 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 115 134 4.8E-16 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS00260 d5bc302cdcebd7c6ae850fa6d0d1093a 523 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 30 55 4.8E-16 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 LT40_RS02065 484702a7b80429da7d56ea7200fd3bf6 581 PIRSF PIRSF035859 1 581 0.0 T 23-04-2016 IPR014597 ABC transporter, periplasmic substrate-binding protein GO:0005215 LT40_RS02065 484702a7b80429da7d56ea7200fd3bf6 581 Gene3D G3DSA:3.40.190.10 84 202 8.4E-11 T 23-04-2016 LT40_RS02065 484702a7b80429da7d56ea7200fd3bf6 581 SUPERFAMILY SSF53850 78 521 3.5E-55 T 23-04-2016 LT40_RS02065 484702a7b80429da7d56ea7200fd3bf6 581 PANTHER PTHR30061 90 542 2.7E-12 T 23-04-2016 LT40_RS02065 484702a7b80429da7d56ea7200fd3bf6 581 Gene3D G3DSA:3.40.190.10 203 450 5.9E-41 T 23-04-2016 LT40_RS06145 73dc2cb17aeb7082a77f2b5bfe2cc292 361 Gene3D G3DSA:3.90.1150.10 259 360 1.7E-39 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS06145 73dc2cb17aeb7082a77f2b5bfe2cc292 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 6 359 1.8E-161 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 LT40_RS06145 73dc2cb17aeb7082a77f2b5bfe2cc292 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 360 50.89 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 LT40_RS06145 73dc2cb17aeb7082a77f2b5bfe2cc292 361 PIRSF PIRSF000525 1 361 9.4E-149 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 LT40_RS06145 73dc2cb17aeb7082a77f2b5bfe2cc292 361 PANTHER PTHR21152 2 361 1.3E-187 T 23-04-2016 LT40_RS06145 73dc2cb17aeb7082a77f2b5bfe2cc292 361 SUPERFAMILY SSF53383 3 359 1.17E-118 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS06145 73dc2cb17aeb7082a77f2b5bfe2cc292 361 PANTHER PTHR21152:SF1 2 361 1.3E-187 T 23-04-2016 LT40_RS06145 73dc2cb17aeb7082a77f2b5bfe2cc292 361 Gene3D G3DSA:3.40.640.10 18 258 3.2E-109 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS06145 73dc2cb17aeb7082a77f2b5bfe2cc292 361 Pfam PF00266 Aminotransferase class-V 6 349 6.2E-51 T 23-04-2016 IPR000192 Aminotransferase class V domain LT40_RS02985 432ea0c34beb98edc2ec21f8ecff729f 217 PANTHER PTHR30177 15 215 2.5E-82 T 23-04-2016 LT40_RS02985 432ea0c34beb98edc2ec21f8ecff729f 217 PANTHER PTHR30177:SF4 15 215 2.5E-82 T 23-04-2016 LT40_RS02985 432ea0c34beb98edc2ec21f8ecff729f 217 Gene3D G3DSA:1.10.3720.10 11 204 2.6E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02985 432ea0c34beb98edc2ec21f8ecff729f 217 SUPERFAMILY SSF161098 12 203 1.44E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02985 432ea0c34beb98edc2ec21f8ecff729f 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 210 4.9E-22 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS16825 be8d0cc5e4ca44f142fb6c5ef3e70834 219 SUPERFAMILY SSF52317 3 216 3.35E-59 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS16825 be8d0cc5e4ca44f142fb6c5ef3e70834 219 PIRSF PIRSF006320 2 217 3.7E-102 T 23-04-2016 IPR026041 Enhancing lycopene biosynthesis protein 2 LT40_RS16825 be8d0cc5e4ca44f142fb6c5ef3e70834 219 Gene3D G3DSA:3.40.50.880 1 218 4.2E-100 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like LT40_RS16825 be8d0cc5e4ca44f142fb6c5ef3e70834 219 PANTHER PTHR10224 1 219 3.0E-117 T 23-04-2016 LT40_RS03355 697a4ed3602459bcc0003244a23be21d 272 Gene3D G3DSA:3.40.50.150 36 270 1.8E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS03355 697a4ed3602459bcc0003244a23be21d 272 SUPERFAMILY SSF53335 21 229 7.12E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS03355 697a4ed3602459bcc0003244a23be21d 272 Pfam PF08241 Methyltransferase domain 59 150 4.9E-20 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LT40_RS03355 697a4ed3602459bcc0003244a23be21d 272 PANTHER PTHR10108 25 190 7.5E-25 T 23-04-2016 LT40_RS06395 23fd77bd16deebaebcdb5cfbdda926a5 175 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 153 2.5E-24 T 23-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component LT40_RS06395 23fd77bd16deebaebcdb5cfbdda926a5 175 PANTHER PTHR35011:SF2 5 171 1.5E-33 T 23-04-2016 LT40_RS06395 23fd77bd16deebaebcdb5cfbdda926a5 175 PANTHER PTHR35011 5 171 1.5E-33 T 23-04-2016 LT40_RS18135 2b3578d1172375c23edcdfd5fda885f2 344 Pfam PF13416 Bacterial extracellular solute-binding protein 55 306 3.5E-42 T 23-04-2016 LT40_RS18135 2b3578d1172375c23edcdfd5fda885f2 344 Gene3D G3DSA:3.40.190.10 140 284 2.9E-36 T 23-04-2016 LT40_RS18135 2b3578d1172375c23edcdfd5fda885f2 344 Gene3D G3DSA:3.40.190.10 24 139 9.0E-6 T 23-04-2016 LT40_RS18135 2b3578d1172375c23edcdfd5fda885f2 344 PANTHER PTHR30222:SF2 10 344 1.3E-161 T 23-04-2016 LT40_RS18135 2b3578d1172375c23edcdfd5fda885f2 344 PANTHER PTHR30222 10 344 1.3E-161 T 23-04-2016 LT40_RS18135 2b3578d1172375c23edcdfd5fda885f2 344 SUPERFAMILY SSF53850 25 341 2.6E-65 T 23-04-2016 LT40_RS09800 a91de1de1c2c8987e5f4dcdafcbf9c20 89 Pfam PF07865 Protein of unknown function (DUF1652) 6 71 4.0E-24 T 23-04-2016 IPR012448 Protein of unknown function DUF1652 LT40_RS02210 64780ecbbc9d94129efec84360dc1b46 625 Gene3D G3DSA:3.30.300.30 495 600 3.3E-26 T 23-04-2016 LT40_RS02210 64780ecbbc9d94129efec84360dc1b46 625 Pfam PF00501 AMP-binding enzyme 66 500 8.6E-87 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LT40_RS02210 64780ecbbc9d94129efec84360dc1b46 625 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 588 1.1E-24 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain LT40_RS02210 64780ecbbc9d94129efec84360dc1b46 625 PANTHER PTHR24095:SF160 1 625 0.0 T 23-04-2016 LT40_RS02210 64780ecbbc9d94129efec84360dc1b46 625 Gene3D G3DSA:2.30.38.10 416 494 8.4E-11 T 23-04-2016 LT40_RS02210 64780ecbbc9d94129efec84360dc1b46 625 Gene3D G3DSA:3.40.50.980 241 400 2.9E-29 T 23-04-2016 LT40_RS02210 64780ecbbc9d94129efec84360dc1b46 625 SUPERFAMILY SSF56801 2 622 8.37E-160 T 23-04-2016 LT40_RS02210 64780ecbbc9d94129efec84360dc1b46 625 Gene3D G3DSA:3.40.50.980 53 240 5.5E-37 T 23-04-2016 LT40_RS02210 64780ecbbc9d94129efec84360dc1b46 625 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 57 1.0E-18 T 23-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 LT40_RS02210 64780ecbbc9d94129efec84360dc1b46 625 PANTHER PTHR24095 1 625 0.0 T 23-04-2016 LT40_RS02210 64780ecbbc9d94129efec84360dc1b46 625 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 23-04-2016 IPR020845 AMP-binding, conserved site LT40_RS06255 23dc902427122b81ec01680dc1a43df2 365 Gene3D G3DSA:3.40.50.1820 46 360 1.0E-88 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS06255 23dc902427122b81ec01680dc1a43df2 365 Pfam PF07859 alpha/beta hydrolase fold 134 339 1.7E-65 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LT40_RS06255 23dc902427122b81ec01680dc1a43df2 365 SUPERFAMILY SSF53474 95 348 5.02E-71 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS06255 23dc902427122b81ec01680dc1a43df2 365 PANTHER PTHR23024:SF24 88 339 2.7E-76 T 23-04-2016 LT40_RS06255 23dc902427122b81ec01680dc1a43df2 365 PANTHER PTHR23024 88 339 2.7E-76 T 23-04-2016 LT40_RS06635 1136f7ebd297b4e5a3df2ecb788e5b45 236 Pfam PF11306 Protein of unknown function (DUF3108) 11 217 1.4E-25 T 23-04-2016 IPR021457 Protein of unknown function DUF3108 LT40_RS11505 ea966a306210c2e2857d2da524850cf7 141 SUPERFAMILY SSF54593 5 137 1.75E-24 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS11505 ea966a306210c2e2857d2da524850cf7 141 Gene3D G3DSA:3.10.180.10 6 137 4.1E-27 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS11505 ea966a306210c2e2857d2da524850cf7 141 PANTHER PTHR39434 1 141 1.5E-48 T 23-04-2016 LT40_RS11505 ea966a306210c2e2857d2da524850cf7 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 129 3.3E-6 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain LT40_RS11505 ea966a306210c2e2857d2da524850cf7 141 PANTHER PTHR39434:SF1 1 141 1.5E-48 T 23-04-2016 LT40_RS17795 b8c423cb2b9017566d088c7354454d4f 602 SMART SM00382 381 568 2.6E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS17795 b8c423cb2b9017566d088c7354454d4f 602 PANTHER PTHR24221 1 601 3.8E-225 T 23-04-2016 LT40_RS17795 b8c423cb2b9017566d088c7354454d4f 602 SUPERFAMILY SSF52540 346 590 8.37E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17795 b8c423cb2b9017566d088c7354454d4f 602 Pfam PF00005 ABC transporter 372 522 6.1E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS17795 b8c423cb2b9017566d088c7354454d4f 602 Pfam PF00664 ABC transporter transmembrane region 32 305 7.0E-50 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS17795 b8c423cb2b9017566d088c7354454d4f 602 Gene3D G3DSA:1.20.1560.10 19 340 2.1E-70 T 23-04-2016 LT40_RS17795 b8c423cb2b9017566d088c7354454d4f 602 SUPERFAMILY SSF90123 19 340 4.58E-72 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LT40_RS17795 b8c423cb2b9017566d088c7354454d4f 602 Gene3D G3DSA:3.40.50.300 354 586 6.1E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS17795 b8c423cb2b9017566d088c7354454d4f 602 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 17 594 1.2E-255 T 23-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 LT40_RS17795 b8c423cb2b9017566d088c7354454d4f 602 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LT40_RS11855 2520edb111f7af600cd5ef3e3df79969 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 277 4.4E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11855 2520edb111f7af600cd5ef3e3df79969 288 PANTHER PTHR30465 5 276 5.3E-78 T 23-04-2016 LT40_RS11855 2520edb111f7af600cd5ef3e3df79969 288 Gene3D G3DSA:1.10.3720.10 78 282 5.6E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS11855 2520edb111f7af600cd5ef3e3df79969 288 PANTHER PTHR30465:SF10 5 276 5.3E-78 T 23-04-2016 LT40_RS11855 2520edb111f7af600cd5ef3e3df79969 288 SUPERFAMILY SSF161098 82 269 7.33E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS02970 15935e0eceaddb2a50c5af452a4f49e6 431 PIRSF PIRSF005353 1 429 9.7E-180 T 23-04-2016 IPR026033 Purine permease PbuG-like LT40_RS02970 15935e0eceaddb2a50c5af452a4f49e6 431 PANTHER PTHR11119:SF9 1 418 2.1E-173 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 LT40_RS02970 15935e0eceaddb2a50c5af452a4f49e6 431 PANTHER PTHR11119 1 418 2.1E-173 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS02970 15935e0eceaddb2a50c5af452a4f49e6 431 Pfam PF00860 Permease family 17 391 3.9E-56 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LT40_RS08375 8d9d826cb58a748febe206817b199aaa 207 PANTHER PTHR30485:SF1 6 194 1.1E-56 T 23-04-2016 LT40_RS08375 8d9d826cb58a748febe206817b199aaa 207 Pfam PF01292 Prokaryotic cytochrome b561 7 194 4.9E-24 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 LT40_RS08375 8d9d826cb58a748febe206817b199aaa 207 SUPERFAMILY SSF81342 4 197 1.8E-36 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 LT40_RS08375 8d9d826cb58a748febe206817b199aaa 207 Gene3D G3DSA:1.20.950.20 5 197 1.6E-47 T 23-04-2016 LT40_RS08375 8d9d826cb58a748febe206817b199aaa 207 PANTHER PTHR30485 6 194 1.1E-56 T 23-04-2016 LT40_RS20195 7d8acfb0e013f5a25b6cbb95dc8deca5 247 PANTHER PTHR30269 3 245 3.7E-45 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LT40_RS20195 7d8acfb0e013f5a25b6cbb95dc8deca5 247 Pfam PF01925 Sulfite exporter TauE/SafE 12 239 2.8E-28 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LT40_RS20195 7d8acfb0e013f5a25b6cbb95dc8deca5 247 PANTHER PTHR30269:SF14 3 245 3.7E-45 T 23-04-2016 LT40_RS20475 1e19f9e025491eeacb4ab79f59c8f052 293 PANTHER PTHR11075:SF6 1 291 3.1E-143 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 LT40_RS20475 1e19f9e025491eeacb4ab79f59c8f052 293 SMART SM00937 13 123 9.0E-54 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LT40_RS20475 1e19f9e025491eeacb4ab79f59c8f052 293 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 291 9.7E-141 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 LT40_RS20475 1e19f9e025491eeacb4ab79f59c8f052 293 Pfam PF00472 RF-1 domain 157 265 1.7E-39 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LT40_RS20475 1e19f9e025491eeacb4ab79f59c8f052 293 Gene3D G3DSA:3.30.160.20 156 233 5.8E-38 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain LT40_RS20475 1e19f9e025491eeacb4ab79f59c8f052 293 PANTHER PTHR11075 1 291 3.1E-143 T 23-04-2016 LT40_RS20475 1e19f9e025491eeacb4ab79f59c8f052 293 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 173 189 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LT40_RS20475 1e19f9e025491eeacb4ab79f59c8f052 293 Pfam PF03462 PCRF domain 7 148 2.5E-45 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LT40_RS20475 1e19f9e025491eeacb4ab79f59c8f052 293 SUPERFAMILY SSF75620 5 290 3.14E-120 T 23-04-2016 LT40_RS20475 1e19f9e025491eeacb4ab79f59c8f052 293 Gene3D G3DSA:1.20.58.410 2 44 1.2E-6 T 23-04-2016 LT40_RS12055 31ab784fb65a7c66d4078923d9751da9 160 PIRSF PIRSF029548 1 160 9.7E-104 T 23-04-2016 IPR014557 Uncharacterised conserved protein UCP029548, STAS-type LT40_RS12055 31ab784fb65a7c66d4078923d9751da9 160 Gene3D G3DSA:3.30.750.24 5 104 2.5E-13 T 23-04-2016 IPR002645 STAS domain LT40_RS12055 31ab784fb65a7c66d4078923d9751da9 160 SUPERFAMILY SSF52091 6 105 1.14E-12 T 23-04-2016 IPR002645 STAS domain LT40_RS01380 0126e41d870a86dfb8a999c0ff95fcd1 180 PANTHER PTHR33204 2 162 9.8E-44 T 23-04-2016 LT40_RS01380 0126e41d870a86dfb8a999c0ff95fcd1 180 PANTHER PTHR33204:SF10 2 162 9.8E-44 T 23-04-2016 LT40_RS01380 0126e41d870a86dfb8a999c0ff95fcd1 180 SUPERFAMILY SSF46785 9 145 2.11E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS01380 0126e41d870a86dfb8a999c0ff95fcd1 180 Pfam PF01638 HxlR-like helix-turn-helix 23 107 1.5E-20 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type LT40_RS01380 0126e41d870a86dfb8a999c0ff95fcd1 180 Gene3D G3DSA:1.10.10.10 8 112 1.0E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS03825 3c12088c1596c9b2340f26fae02cc8a7 265 PANTHER PTHR30188:SF4 2 263 5.7E-116 T 23-04-2016 LT40_RS03825 3c12088c1596c9b2340f26fae02cc8a7 265 Pfam PF02405 Permease MlaE 49 260 1.6E-76 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 LT40_RS03825 3c12088c1596c9b2340f26fae02cc8a7 265 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 15 262 4.2E-90 T 23-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria LT40_RS03825 3c12088c1596c9b2340f26fae02cc8a7 265 PANTHER PTHR30188 2 263 5.7E-116 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 LT40_RS07825 2f590939a7a6d0ffe12ad60019a48d78 124 SUPERFAMILY SSF48452 10 111 4.67E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS07825 2f590939a7a6d0ffe12ad60019a48d78 124 Gene3D G3DSA:1.25.40.10 9 111 4.3E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS09245 2e85c497c8d3dceb79027bdba1c220eb 107 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 44 104 2.3E-22 T 23-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain LT40_RS09245 2e85c497c8d3dceb79027bdba1c220eb 107 Gene3D G3DSA:1.10.150.320 39 106 2.0E-16 T 23-04-2016 LT40_RS09245 2e85c497c8d3dceb79027bdba1c220eb 107 SUPERFAMILY SSF47781 31 104 7.34E-23 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 LT40_RS09245 2e85c497c8d3dceb79027bdba1c220eb 107 Pfam PF12836 Helix-hairpin-helix motif 44 105 1.9E-20 T 23-04-2016 LT40_RS09245 2e85c497c8d3dceb79027bdba1c220eb 107 PANTHER PTHR21180 35 107 4.3E-20 T 23-04-2016 LT40_RS11550 920a4dc3224bad3df1b28fc99b8b2517 208 Gene3D G3DSA:3.50.30.40 20 175 2.1E-47 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS11550 920a4dc3224bad3df1b28fc99b8b2517 208 PANTHER PTHR33254:SF5 12 201 4.4E-52 T 23-04-2016 LT40_RS11550 920a4dc3224bad3df1b28fc99b8b2517 208 Pfam PF03737 Demethylmenaquinone methyltransferase 24 168 9.5E-43 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS11550 920a4dc3224bad3df1b28fc99b8b2517 208 PANTHER PTHR33254 12 201 4.4E-52 T 23-04-2016 LT40_RS11550 920a4dc3224bad3df1b28fc99b8b2517 208 SUPERFAMILY SSF89562 19 175 7.72E-43 T 23-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein LT40_RS02245 edd2ecac64a3313fc38af10d474e6274 146 SMART SM00862 46 120 6.4E-8 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS02245 edd2ecac64a3313fc38af10d474e6274 146 SUPERFAMILY SSF46894 30 120 4.25E-14 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS02245 edd2ecac64a3313fc38af10d474e6274 146 Gene3D G3DSA:1.10.10.10 23 121 1.3E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS02245 edd2ecac64a3313fc38af10d474e6274 146 Pfam PF00486 Transcriptional regulatory protein, C terminal 48 120 1.6E-8 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LT40_RS05950 0e435e0987c610e720f1bfebe77fe8f6 114 Pfam PF14333 Domain of unknown function (DUF4389) 10 85 6.9E-29 T 23-04-2016 IPR025498 Protein of unknown function DUF4389 LT40_RS09255 6ac2071c060cd4e1fa274bf4a8ac4cc6 153 SUPERFAMILY SSF52172 5 81 1.99E-7 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS09255 6ac2071c060cd4e1fa274bf4a8ac4cc6 153 Gene3D G3DSA:3.40.50.2300 3 82 1.8E-6 T 23-04-2016 LT40_RS03235 53470e2a231151029078d4e371e19de1 302 Gene3D G3DSA:1.10.3720.10 68 293 8.6E-54 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03235 53470e2a231151029078d4e371e19de1 302 PANTHER PTHR30193:SF29 1 301 3.3E-140 T 23-04-2016 LT40_RS03235 53470e2a231151029078d4e371e19de1 302 PANTHER PTHR30193 1 301 3.3E-140 T 23-04-2016 LT40_RS03235 53470e2a231151029078d4e371e19de1 302 SUPERFAMILY SSF161098 62 288 1.44E-49 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03235 53470e2a231151029078d4e371e19de1 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 289 4.4E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS07085 3b4de4e99e3c659dd6c242f8d7ca844a 124 Pfam PF06249 Ethanolamine utilisation protein EutQ 38 119 1.6E-15 T 23-04-2016 IPR010424 Ethanolamine utilisation EutQ UniPathway: UPA00560 LT40_RS07085 3b4de4e99e3c659dd6c242f8d7ca844a 124 SUPERFAMILY SSF51182 25 117 3.89E-14 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS07085 3b4de4e99e3c659dd6c242f8d7ca844a 124 Gene3D G3DSA:2.60.120.10 13 119 1.1E-19 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS08075 101e64c21598f7ef1599e314e914e739 248 SUPERFAMILY SSF48317 26 233 2.18E-10 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LT40_RS08075 101e64c21598f7ef1599e314e914e739 248 Pfam PF01569 PAP2 superfamily 101 230 7.4E-17 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LT40_RS05210 2d074ece1badfc33250d4135a993d661 396 Pfam PF05343 M42 glutamyl aminopeptidase 54 340 1.9E-72 T 23-04-2016 IPR008007 Peptidase M42 LT40_RS05210 2d074ece1badfc33250d4135a993d661 396 TIGRFAM TIGR03106 trio_M42_hydro: hydrolase, peptidase M42 family 9 350 5.4E-177 T 23-04-2016 IPR017537 Peptidase M42, hydrolase LT40_RS05210 2d074ece1badfc33250d4135a993d661 396 Gene3D G3DSA:3.40.630.10 175 349 2.0E-50 T 23-04-2016 LT40_RS05210 2d074ece1badfc33250d4135a993d661 396 Gene3D G3DSA:3.40.630.10 11 78 2.0E-50 T 23-04-2016 LT40_RS05210 2d074ece1badfc33250d4135a993d661 396 Gene3D G3DSA:2.40.30.40 79 174 2.0E-24 T 23-04-2016 IPR023367 Peptidase M42, domain 2 LT40_RS05210 2d074ece1badfc33250d4135a993d661 396 PANTHER PTHR32481 8 361 3.6E-176 T 23-04-2016 LT40_RS05210 2d074ece1badfc33250d4135a993d661 396 SUPERFAMILY SSF101821 79 191 2.75E-25 T 23-04-2016 LT40_RS05210 2d074ece1badfc33250d4135a993d661 396 SUPERFAMILY SSF53187 12 91 2.56E-46 T 23-04-2016 LT40_RS05210 2d074ece1badfc33250d4135a993d661 396 SUPERFAMILY SSF53187 186 348 2.56E-46 T 23-04-2016 LT40_RS05210 2d074ece1badfc33250d4135a993d661 396 PANTHER PTHR32481:SF7 8 361 3.6E-176 T 23-04-2016 LT40_RS00690 0fbec101010a66d8890f6bea87850f4a 175 PANTHER PTHR38099 2 172 9.2E-50 T 23-04-2016 LT40_RS00690 0fbec101010a66d8890f6bea87850f4a 175 Pfam PF02620 Uncharacterized ACR, COG1399 66 170 4.3E-18 T 23-04-2016 IPR003772 Protein of unknown function DUF177 LT40_RS09325 576f03378850a8cfe02b93c2408b3117 105 Gene3D G3DSA:3.30.1050.10 4 103 7.6E-29 T 23-04-2016 IPR003033 SCP2 sterol-binding domain LT40_RS09325 576f03378850a8cfe02b93c2408b3117 105 SUPERFAMILY SSF55718 3 103 1.04E-29 T 23-04-2016 IPR003033 SCP2 sterol-binding domain LT40_RS09325 576f03378850a8cfe02b93c2408b3117 105 Pfam PF02036 SCP-2 sterol transfer family 16 103 9.2E-21 T 23-04-2016 IPR003033 SCP2 sterol-binding domain LT40_RS09325 576f03378850a8cfe02b93c2408b3117 105 PANTHER PTHR10094 21 103 6.3E-24 T 23-04-2016 LT40_RS09325 576f03378850a8cfe02b93c2408b3117 105 PANTHER PTHR10094:SF13 21 103 6.3E-24 T 23-04-2016 LT40_RS09085 a0bc157bed2d97301e8397cf7a0338b0 1069 SUPERFAMILY SSF53756 758 1036 6.28E-35 T 23-04-2016 LT40_RS09085 a0bc157bed2d97301e8397cf7a0338b0 1069 Pfam PF00534 Glycosyl transferases group 1 870 1011 8.8E-21 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS09085 a0bc157bed2d97301e8397cf7a0338b0 1069 PANTHER PTHR12526:SF399 761 1034 2.6E-24 T 23-04-2016 LT40_RS09085 a0bc157bed2d97301e8397cf7a0338b0 1069 PANTHER PTHR12526 761 1034 2.6E-24 T 23-04-2016 LT40_RS09085 a0bc157bed2d97301e8397cf7a0338b0 1069 SUPERFAMILY SSF53756 364 608 2.35E-27 T 23-04-2016 LT40_RS09085 a0bc157bed2d97301e8397cf7a0338b0 1069 SUPERFAMILY SSF53756 224 330 2.35E-27 T 23-04-2016 LT40_RS09085 a0bc157bed2d97301e8397cf7a0338b0 1069 Gene3D G3DSA:3.40.50.2000 866 1009 3.2E-11 T 23-04-2016 LT40_RS09085 a0bc157bed2d97301e8397cf7a0338b0 1069 Gene3D G3DSA:3.40.50.2000 414 514 9.7E-4 T 23-04-2016 LT40_RS00070 7e441e57d2c4a37d6919a5833de9e501 318 PANTHER PTHR10108:SF847 74 318 1.1E-98 T 23-04-2016 LT40_RS00070 7e441e57d2c4a37d6919a5833de9e501 318 Gene3D G3DSA:3.40.50.150 90 288 8.7E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS00070 7e441e57d2c4a37d6919a5833de9e501 318 SUPERFAMILY SSF53335 88 317 4.58E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS00070 7e441e57d2c4a37d6919a5833de9e501 318 PANTHER PTHR10108 74 318 1.1E-98 T 23-04-2016 LT40_RS00070 7e441e57d2c4a37d6919a5833de9e501 318 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 12 318 52.442 T 23-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 LT40_RS00070 7e441e57d2c4a37d6919a5833de9e501 318 Pfam PF08003 Protein of unknown function (DUF1698) 8 318 1.5E-144 T 23-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like LT40_RS00070 7e441e57d2c4a37d6919a5833de9e501 318 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 8 317 3.0E-137 T 23-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 LT40_RS08660 82c14d461c5a25ba7d96ffdcfcd2b481 253 Pfam PF13730 Helix-turn-helix domain 15 65 1.5E-8 T 23-04-2016 LT40_RS08660 82c14d461c5a25ba7d96ffdcfcd2b481 253 Gene3D G3DSA:1.10.10.10 10 90 9.4E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15630 63a25419d531f564bfa496451c539bea 437 Gene3D G3DSA:1.10.3860.10 2 415 5.3E-133 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 305 328 - T 23-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 Pfam PF00375 Sodium:dicarboxylate symporter family 8 410 2.7E-120 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 23-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 3.4E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 PRINTS PR00173 Glutamate-aspartate symporter signature 202 221 3.4E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 3.4E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 PRINTS PR00173 Glutamate-aspartate symporter signature 154 176 3.4E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 3.4E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 PRINTS PR00173 Glutamate-aspartate symporter signature 364 384 3.4E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 3.4E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 3.4E-52 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 PANTHER PTHR11958 1 434 2.6E-250 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 SUPERFAMILY SSF118215 8 411 4.32E-125 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 LT40_RS15630 63a25419d531f564bfa496451c539bea 437 PANTHER PTHR11958:SF26 1 434 2.6E-250 T 23-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 LT40_RS10250 8e0245a68caecf366baff8f5f5c7a4e1 345 Gene3D G3DSA:3.40.50.1820 12 180 4.4E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS10250 8e0245a68caecf366baff8f5f5c7a4e1 345 Gene3D G3DSA:3.40.50.1820 219 331 4.4E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS10250 8e0245a68caecf366baff8f5f5c7a4e1 345 SUPERFAMILY SSF53474 219 295 7.21E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS10250 8e0245a68caecf366baff8f5f5c7a4e1 345 SUPERFAMILY SSF53474 12 180 7.21E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS10250 8e0245a68caecf366baff8f5f5c7a4e1 345 PIRSF PIRSF031982 5 337 2.2E-92 T 23-04-2016 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 PANTHER PTHR26402 14 218 5.6E-42 T 23-04-2016 LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 Gene3D G3DSA:1.10.10.10 139 222 1.0E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 SMART SM00421 161 218 1.5E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 Pfam PF00072 Response regulator receiver domain 17 130 3.4E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 3.9E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 3.9E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 3.9E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 SMART SM00448 14 132 2.6E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 217 2.9E-13 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 Gene3D G3DSA:3.40.50.2300 14 138 1.4E-23 T 23-04-2016 LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 PANTHER PTHR26402:SF458 14 218 5.6E-42 T 23-04-2016 LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 SUPERFAMILY SSF46894 150 223 5.78E-15 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LT40_RS09385 200d20bb528dd270c9ab8ec910941a63 225 SUPERFAMILY SSF52172 14 148 1.42E-21 T 23-04-2016 IPR011006 CheY-like superfamily LT40_RS01695 9d2d14bd70f7fdb4e0d970446d397d98 154 SUPERFAMILY SSF54534 83 143 6.93E-7 T 23-04-2016 LT40_RS01695 9d2d14bd70f7fdb4e0d970446d397d98 154 Gene3D G3DSA:3.10.50.30 81 143 4.7E-8 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LT40_RS00280 52e6dea82d10f1cf34f6c64aab6a5520 289 PANTHER PTHR11795:SF371 1 289 1.5E-72 T 23-04-2016 LT40_RS00280 52e6dea82d10f1cf34f6c64aab6a5520 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 273 5.5E-40 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS00280 52e6dea82d10f1cf34f6c64aab6a5520 289 PANTHER PTHR11795 1 289 1.5E-72 T 23-04-2016 LT40_RS12635 d2fe1543bcc477056f96b461116a85d9 117 Pfam PF14346 Domain of unknown function (DUF4398) 12 110 1.1E-21 T 23-04-2016 IPR025511 Domain of unknown function DUF4398 LT40_RS03730 75e38f6ee62981e4491725d5daf28e2d 480 Pfam PF01523 Putative modulator of DNA gyrase 38 330 2.1E-66 T 23-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS03730 75e38f6ee62981e4491725d5daf28e2d 480 SUPERFAMILY SSF111283 21 478 2.09E-132 T 23-04-2016 LT40_RS03730 75e38f6ee62981e4491725d5daf28e2d 480 PANTHER PTHR30624:SF4 15 480 8.2E-248 T 23-04-2016 LT40_RS03730 75e38f6ee62981e4491725d5daf28e2d 480 PANTHER PTHR30624 15 480 8.2E-248 T 23-04-2016 LT40_RS03730 75e38f6ee62981e4491725d5daf28e2d 480 PIRSF PIRSF004919 18 479 4.1E-141 T 23-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS16890 380a83038b589ae832731f58811ceafe 224 Gene3D G3DSA:3.10.490.10 39 204 4.8E-26 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like LT40_RS16890 380a83038b589ae832731f58811ceafe 224 SUPERFAMILY SSF110857 44 157 1.57E-9 T 23-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like LT40_RS16890 380a83038b589ae832731f58811ceafe 224 PANTHER PTHR12192 26 204 2.3E-45 T 23-04-2016 IPR006840 ChaC-like protein LT40_RS16890 380a83038b589ae832731f58811ceafe 224 PANTHER PTHR12192:SF9 26 204 2.3E-45 T 23-04-2016 LT40_RS16890 380a83038b589ae832731f58811ceafe 224 Pfam PF04752 ChaC-like protein 44 205 1.4E-38 T 23-04-2016 IPR006840 ChaC-like protein LT40_RS13110 533dcd81dbb2710c3c0924af7218c001 558 Gene3D G3DSA:3.40.190.10 164 313 1.2E-33 T 23-04-2016 LT40_RS13110 533dcd81dbb2710c3c0924af7218c001 558 SUPERFAMILY SSF53850 48 556 1.5E-123 T 23-04-2016 LT40_RS13110 533dcd81dbb2710c3c0924af7218c001 558 Gene3D G3DSA:3.10.105.10 314 526 2.6E-55 T 23-04-2016 LT40_RS13110 533dcd81dbb2710c3c0924af7218c001 558 PANTHER PTHR30290 11 558 1.0E-132 T 23-04-2016 LT40_RS13110 533dcd81dbb2710c3c0924af7218c001 558 PIRSF PIRSF002741 18 558 2.4E-103 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LT40_RS13110 533dcd81dbb2710c3c0924af7218c001 558 PANTHER PTHR30290:SF9 11 558 1.0E-132 T 23-04-2016 LT40_RS13110 533dcd81dbb2710c3c0924af7218c001 558 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 469 1.5E-82 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain LT40_RS09110 1329c6c33ad03fc729a108f19e2c24a6 335 PANTHER PTHR39087 1 335 3.5E-27 T 23-04-2016 LT40_RS09110 1329c6c33ad03fc729a108f19e2c24a6 335 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 23 323 3.4E-23 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LT40_RS09110 1329c6c33ad03fc729a108f19e2c24a6 335 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 16 319 9.7E-46 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LT40_RS17475 6a3775bf7d22a05a3ebae68df8c40c35 294 Gene3D G3DSA:3.20.20.70 3 291 2.2E-112 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 LT40_RS17475 6a3775bf7d22a05a3ebae68df8c40c35 294 PANTHER PTHR37418 2 88 6.4E-146 T 23-04-2016 LT40_RS17475 6a3775bf7d22a05a3ebae68df8c40c35 294 PANTHER PTHR37418 107 294 6.4E-146 T 23-04-2016 LT40_RS17475 6a3775bf7d22a05a3ebae68df8c40c35 294 Pfam PF05853 beta-keto acid cleavage enzyme 5 291 5.3E-98 T 23-04-2016 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00600+2.3.1.24|UniPathway: UPA00870 LT40_RS17475 6a3775bf7d22a05a3ebae68df8c40c35 294 PANTHER PTHR37418:SF2 2 88 6.4E-146 T 23-04-2016 LT40_RS17475 6a3775bf7d22a05a3ebae68df8c40c35 294 PANTHER PTHR37418:SF2 107 294 6.4E-146 T 23-04-2016 LT40_RS13045 92cd3d90f1591b52455cc72fe726bda4 173 Gene3D G3DSA:3.30.450.40 22 154 1.8E-12 T 23-04-2016 IPR029016 GAF domain-like LT40_RS13045 92cd3d90f1591b52455cc72fe726bda4 173 Pfam PF01590 GAF domain 25 154 1.8E-11 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS13045 92cd3d90f1591b52455cc72fe726bda4 173 SMART SM00065 19 167 0.0017 T 23-04-2016 IPR003018 GAF domain GO:0005515 LT40_RS13045 92cd3d90f1591b52455cc72fe726bda4 173 SUPERFAMILY SSF55781 25 154 1.98E-17 T 23-04-2016 IPR029016 GAF domain-like LT40_RS14995 1af91828f54a63da5acded1f3135395d 298 SUPERFAMILY SSF56349 35 250 8.24E-7 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LT40_RS14995 1af91828f54a63da5acded1f3135395d 298 Gene3D G3DSA:1.10.443.10 109 249 5.6E-4 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LT40_RS14995 1af91828f54a63da5acded1f3135395d 298 Gene3D G3DSA:1.10.150.130 8 76 8.5E-7 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal LT40_RS15805 b4d3956ba331a42b5f38e7e4ddd7b9b8 315 Gene3D G3DSA:1.10.1370.10 142 314 1.1E-48 T 23-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 LT40_RS15805 b4d3956ba331a42b5f38e7e4ddd7b9b8 315 SUPERFAMILY SSF55486 1 311 6.07E-73 T 23-04-2016 LT40_RS15805 b4d3956ba331a42b5f38e7e4ddd7b9b8 315 Gene3D G3DSA:3.40.390.10 1 141 1.1E-40 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LT40_RS15805 b4d3956ba331a42b5f38e7e4ddd7b9b8 315 PANTHER PTHR11804 1 313 1.8E-80 T 23-04-2016 LT40_RS15805 b4d3956ba331a42b5f38e7e4ddd7b9b8 315 Pfam PF01432 Peptidase family M3 1 312 1.5E-68 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 LT40_RS05865 9d7efb990bc57752637483a5e40b75aa 506 Pfam PF02646 RmuC family 174 470 2.5E-105 T 23-04-2016 IPR003798 DNA recombination RmuC LT40_RS05865 9d7efb990bc57752637483a5e40b75aa 506 PANTHER PTHR30563 22 503 3.8E-125 T 23-04-2016 LT40_RS10715 39b22c41db7a80be83adc60b73c84e47 340 Pfam PF00535 Glycosyl transferase family 2 14 119 2.1E-12 T 23-04-2016 IPR001173 Glycosyltransferase 2-like LT40_RS10715 39b22c41db7a80be83adc60b73c84e47 340 Gene3D G3DSA:3.90.550.10 14 249 1.2E-15 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS10715 39b22c41db7a80be83adc60b73c84e47 340 SUPERFAMILY SSF53448 13 306 1.85E-27 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 PANTHER PTHR32303 32 370 1.4E-73 T 23-04-2016 LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 SMART SM00564 240 272 0.0023 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 SMART SM00564 65 96 0.007 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 SMART SM00564 320 351 360.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 SMART SM00564 104 136 0.14 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 SMART SM00564 279 310 780.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 SMART SM00564 145 176 2.2 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 SMART SM00564 190 221 28.0 T 23-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 PANTHER PTHR32303:SF8 32 370 1.4E-73 T 23-04-2016 LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 Pfam PF13360 PQQ-like domain 292 380 5.9E-5 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 Pfam PF13360 PQQ-like domain 79 288 3.5E-46 T 23-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 380 7.7E-133 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 Gene3D G3DSA:2.140.10.10 8 382 3.9E-68 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 SUPERFAMILY SSF50998 32 371 3.23E-75 T 23-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily LT40_RS03560 a32d55621e4548c4287731b60967f62f 384 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 382 37.977 T 23-04-2016 IPR017687 Outer membrane protein assembly factor BamB LT40_RS00325 8df3d05cd27641208ca2f23a079d0a6f 197 Pfam PF00881 Nitroreductase family 18 62 1.0E-9 T 23-04-2016 IPR029479 Nitroreductase LT40_RS00325 8df3d05cd27641208ca2f23a079d0a6f 197 Pfam PF00881 Nitroreductase family 83 163 1.5E-4 T 23-04-2016 IPR029479 Nitroreductase LT40_RS00325 8df3d05cd27641208ca2f23a079d0a6f 197 PANTHER PTHR23026 7 195 1.4E-15 T 23-04-2016 LT40_RS00325 8df3d05cd27641208ca2f23a079d0a6f 197 SUPERFAMILY SSF55469 6 194 4.45E-42 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 LT40_RS00325 8df3d05cd27641208ca2f23a079d0a6f 197 Gene3D G3DSA:3.40.109.10 6 194 2.6E-42 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 LT40_RS19965 6d8d850735cf6014ce3e3958a633622d 194 PANTHER PTHR12608 10 193 7.6E-34 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 LT40_RS19965 6d8d850735cf6014ce3e3958a633622d 194 Pfam PF01169 Uncharacterized protein family UPF0016 106 180 4.0E-20 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 LT40_RS19965 6d8d850735cf6014ce3e3958a633622d 194 Pfam PF01169 Uncharacterized protein family UPF0016 10 79 3.1E-19 T 23-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 LT40_RS09300 cd1a52267cc51fd8383c766125bebfe0 275 PANTHER PTHR39192 29 275 2.3E-103 T 23-04-2016 LT40_RS09300 cd1a52267cc51fd8383c766125bebfe0 275 Pfam PF09375 Imelysin 35 267 4.2E-43 T 23-04-2016 LT40_RS15880 58a0989ad37cfe7652c93c4ab374ed7f 74 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 1 74 2.0E-22 T 23-04-2016 IPR010595 Protein of unknown function DUF1161 LT40_RS15880 58a0989ad37cfe7652c93c4ab374ed7f 74 Pfam PF06649 Protein of unknown function (DUF1161) 24 74 3.4E-22 T 23-04-2016 IPR010595 Protein of unknown function DUF1161 LT40_RS12480 823bfcf364ad40ba317b28cb21e6cff9 385 SUPERFAMILY SSF51905 4 169 1.99E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12480 823bfcf364ad40ba317b28cb21e6cff9 385 SUPERFAMILY SSF51905 266 353 1.99E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12480 823bfcf364ad40ba317b28cb21e6cff9 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 1.2E-15 T 23-04-2016 LT40_RS12480 823bfcf364ad40ba317b28cb21e6cff9 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 1.2E-15 T 23-04-2016 LT40_RS12480 823bfcf364ad40ba317b28cb21e6cff9 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 1.2E-15 T 23-04-2016 LT40_RS12480 823bfcf364ad40ba317b28cb21e6cff9 385 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 1.2E-15 T 23-04-2016 LT40_RS12480 823bfcf364ad40ba317b28cb21e6cff9 385 PANTHER PTHR13789:SF186 1 356 5.6E-81 T 23-04-2016 LT40_RS12480 823bfcf364ad40ba317b28cb21e6cff9 385 PANTHER PTHR13789 1 356 5.6E-81 T 23-04-2016 LT40_RS12480 823bfcf364ad40ba317b28cb21e6cff9 385 Gene3D G3DSA:3.50.50.60 267 344 4.5E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12480 823bfcf364ad40ba317b28cb21e6cff9 385 Gene3D G3DSA:3.50.50.60 5 175 4.5E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS12480 823bfcf364ad40ba317b28cb21e6cff9 385 Pfam PF01494 FAD binding domain 6 341 6.4E-26 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 LT40_RS10415 8b419a772b99479690a5213c56dc931c 432 Gene3D G3DSA:3.50.50.60 16 118 7.2E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10415 8b419a772b99479690a5213c56dc931c 432 Gene3D G3DSA:3.50.50.60 171 252 7.2E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10415 8b419a772b99479690a5213c56dc931c 432 Gene3D G3DSA:3.50.50.60 344 394 7.2E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10415 8b419a772b99479690a5213c56dc931c 432 Pfam PF01266 FAD dependent oxidoreductase 29 380 1.3E-51 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS10415 8b419a772b99479690a5213c56dc931c 432 PANTHER PTHR13847 8 406 1.1E-76 T 23-04-2016 LT40_RS10415 8b419a772b99479690a5213c56dc931c 432 SUPERFAMILY SSF51905 28 253 1.68E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10415 8b419a772b99479690a5213c56dc931c 432 SUPERFAMILY SSF51905 344 395 1.68E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS10415 8b419a772b99479690a5213c56dc931c 432 PANTHER PTHR13847:SF196 8 406 1.1E-76 T 23-04-2016 LT40_RS00650 50e3c5e65536487a1d3f3657102eed95 426 Pfam PF06057 Bacterial virulence protein (VirJ) 234 422 7.5E-76 T 23-04-2016 IPR010333 Bacterial virulence LT40_RS00650 50e3c5e65536487a1d3f3657102eed95 426 PIRSF PIRSF029063 1 426 5.9E-129 T 23-04-2016 IPR011225 Type IV secretory pathway, VirJ component LT40_RS00650 50e3c5e65536487a1d3f3657102eed95 426 Gene3D G3DSA:3.40.50.1820 275 339 9.8E-9 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS00650 50e3c5e65536487a1d3f3657102eed95 426 SUPERFAMILY SSF53474 222 420 1.56E-22 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS04725 03582c169150f983fa2cb99c663961a2 1181 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 57 281 1.1E-50 T 23-04-2016 IPR018003 Insecticidal toxin complex/plasmid virulence protein LT40_RS02565 1f525a38204902f8fe47e8bae9092d66 106 SUPERFAMILY SSF160544 7 83 1.57E-20 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal LT40_RS02565 1f525a38204902f8fe47e8bae9092d66 106 Gene3D G3DSA:3.40.1690.10 8 83 8.3E-23 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal LT40_RS02565 1f525a38204902f8fe47e8bae9092d66 106 PANTHER PTHR30531 6 93 1.9E-31 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS02565 1f525a38204902f8fe47e8bae9092d66 106 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 78 6.7E-18 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 LT40_RS09725 2a52061e56e0e8ee868a32d66f0ee88a 322 PANTHER PTHR30388:SF4 5 322 6.5E-75 T 23-04-2016 LT40_RS09725 2a52061e56e0e8ee868a32d66f0ee88a 322 Pfam PF02625 XdhC and CoxI family 15 69 3.5E-16 T 23-04-2016 IPR003777 XdhC- CoxI LT40_RS09725 2a52061e56e0e8ee868a32d66f0ee88a 322 PANTHER PTHR30388 5 322 6.5E-75 T 23-04-2016 LT40_RS09725 2a52061e56e0e8ee868a32d66f0ee88a 322 Pfam PF13478 XdhC Rossmann domain 168 310 6.0E-33 T 23-04-2016 IPR027051 XdhC Rossmann domain LT40_RS03620 b7d697051af8925ec299906fc66fe6ed 459 Gene3D G3DSA:2.40.160.10 49 459 5.4E-122 T 23-04-2016 IPR023614 Porin domain LT40_RS03620 b7d697051af8925ec299906fc66fe6ed 459 Pfam PF03573 outer membrane porin, OprD family 44 458 3.7E-124 T 23-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 LT40_RS03620 b7d697051af8925ec299906fc66fe6ed 459 PANTHER PTHR34596 15 459 1.5E-116 T 23-04-2016 LT40_RS11395 32ce31c37e798ab42cdb24c26c9381f5 165 PANTHER PTHR33269:SF2 1 165 8.5E-81 T 23-04-2016 LT40_RS11395 32ce31c37e798ab42cdb24c26c9381f5 165 PANTHER PTHR33269 1 165 8.5E-81 T 23-04-2016 LT40_RS11395 32ce31c37e798ab42cdb24c26c9381f5 165 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 159 1.1E-31 T 23-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 LT40_RS16335 60dc336defd0dcc0128e2eaf5c065a6f 177 Pfam PF11736 Protein of unknown function (DUF3299) 24 170 8.8E-43 T 23-04-2016 IPR021727 Protein of unknown function DUF3299 LT40_RS11925 de363a4aea7ef8d623e8f987ab48d353 244 PANTHER PTHR30348 6 234 3.5E-62 T 23-04-2016 LT40_RS11925 de363a4aea7ef8d623e8f987ab48d353 244 Pfam PF01904 Protein of unknown function DUF72 26 234 8.4E-49 T 23-04-2016 IPR002763 Protein of unknown function DUF72 LT40_RS11925 de363a4aea7ef8d623e8f987ab48d353 244 SUPERFAMILY SSF117396 6 234 1.24E-62 T 23-04-2016 IPR002763 Protein of unknown function DUF72 LT40_RS11925 de363a4aea7ef8d623e8f987ab48d353 244 Gene3D G3DSA:3.20.20.410 6 234 1.7E-62 T 23-04-2016 IPR002763 Protein of unknown function DUF72 LT40_RS04460 856ba7ff9d1152888cbad7b10681a33f 356 SUPERFAMILY SSF51695 36 338 9.94E-67 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LT40_RS04460 856ba7ff9d1152888cbad7b10681a33f 356 PANTHER PTHR23344 242 345 8.5E-63 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 LT40_RS04460 856ba7ff9d1152888cbad7b10681a33f 356 PANTHER PTHR23344 36 223 8.5E-63 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 LT40_RS04460 856ba7ff9d1152888cbad7b10681a33f 356 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 43 332 1.1E-41 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 LT40_RS04460 856ba7ff9d1152888cbad7b10681a33f 356 Gene3D G3DSA:3.20.20.190 37 338 1.1E-78 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LT40_RS05630 808951f95f15768bf613fb81b7c3a094 265 PANTHER PTHR30193:SF20 1 265 2.1E-59 T 23-04-2016 LT40_RS05630 808951f95f15768bf613fb81b7c3a094 265 PANTHER PTHR30193 1 265 2.1E-59 T 23-04-2016 LT40_RS05630 808951f95f15768bf613fb81b7c3a094 265 SUPERFAMILY SSF161098 10 261 6.67E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05630 808951f95f15768bf613fb81b7c3a094 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 262 2.4E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS05630 808951f95f15768bf613fb81b7c3a094 265 Gene3D G3DSA:1.10.3720.10 14 263 2.2E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS03275 75c9837598f73b95577b28beab2bd9b0 80 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 67 1.2E-30 T 23-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor LT40_RS03275 75c9837598f73b95577b28beab2bd9b0 80 PANTHER PTHR40613 1 71 2.4E-22 T 23-04-2016 LT40_RS03275 75c9837598f73b95577b28beab2bd9b0 80 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 70 2.0E-24 T 23-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor LT40_RS03275 75c9837598f73b95577b28beab2bd9b0 80 PANTHER PTHR40613:SF1 1 71 2.4E-22 T 23-04-2016 LT40_RS20120 de85a047948ce48cd9bfbb923bac13f8 317 PANTHER PTHR30273 5 317 4.9E-101 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component LT40_RS20120 de85a047948ce48cd9bfbb923bac13f8 317 PANTHER PTHR30273:SF3 5 317 4.9E-101 T 23-04-2016 LT40_RS20120 de85a047948ce48cd9bfbb923bac13f8 317 Pfam PF04773 FecR protein 111 201 2.3E-12 T 23-04-2016 IPR006860 FecR protein LT40_RS20120 de85a047948ce48cd9bfbb923bac13f8 317 PIRSF PIRSF018266 3 316 5.8E-83 T 23-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component LT40_RS20120 de85a047948ce48cd9bfbb923bac13f8 317 Pfam PF16220 Domain of unknown function (DUF4880) 13 54 1.9E-12 T 23-04-2016 IPR032623 FecR, N-terminal LT40_RS06805 fbf6b6c3f7842052cb97b6abe6d935f0 299 Gene3D G3DSA:1.10.3470.10 63 287 3.4E-13 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS06805 fbf6b6c3f7842052cb97b6abe6d935f0 299 SUPERFAMILY SSF81345 21 282 2.35E-33 T 23-04-2016 IPR029022 ABC transporter, BtuC-like LT40_RS06805 fbf6b6c3f7842052cb97b6abe6d935f0 299 PANTHER PTHR30477:SF0 16 297 7.2E-85 T 23-04-2016 LT40_RS06805 fbf6b6c3f7842052cb97b6abe6d935f0 299 Pfam PF00950 ABC 3 transport family 25 286 6.7E-54 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 LT40_RS06805 fbf6b6c3f7842052cb97b6abe6d935f0 299 PANTHER PTHR30477 16 297 7.2E-85 T 23-04-2016 LT40_RS00375 dad76971d6cf7ac46463689800bbdc1f 548 PANTHER PTHR10110:SF120 7 539 7.0E-178 T 23-04-2016 LT40_RS00375 dad76971d6cf7ac46463689800bbdc1f 548 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 8 544 1.4E-127 T 23-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 LT40_RS00375 dad76971d6cf7ac46463689800bbdc1f 548 Pfam PF00999 Sodium/hydrogen exchanger family 7 417 8.9E-74 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LT40_RS00375 dad76971d6cf7ac46463689800bbdc1f 548 PANTHER PTHR10110 7 539 7.0E-178 T 23-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 LT40_RS10065 030b37ea81f0634b9e2087aee9393850 163 Gene3D G3DSA:3.90.1590.10 1 160 4.7E-28 T 23-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 LT40_RS10065 030b37ea81f0634b9e2087aee9393850 163 SUPERFAMILY SSF51316 1 155 7.85E-30 T 23-04-2016 IPR011057 Mss4-like LT40_RS10065 030b37ea81f0634b9e2087aee9393850 163 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 112 2.0E-7 T 23-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 LT40_RS10680 97aefd059733fe4841e2e0485a2968b5 230 Pfam PF08808 RES domain 75 217 3.0E-27 T 23-04-2016 IPR014914 RES domain LT40_RS10680 97aefd059733fe4841e2e0485a2968b5 230 SMART SM00953 82 210 1.7E-25 T 23-04-2016 IPR014914 RES domain LT40_RS09360 3a2ec503c5d8eb26f2d645d45c147e99 100 Pfam PF08980 Domain of unknown function (DUF1883) 1 75 9.0E-31 T 23-04-2016 IPR015073 Atu1913-like LT40_RS09360 3a2ec503c5d8eb26f2d645d45c147e99 100 Gene3D G3DSA:4.10.1210.10 1 91 6.3E-35 T 23-04-2016 IPR015073 Atu1913-like LT40_RS09360 3a2ec503c5d8eb26f2d645d45c147e99 100 SUPERFAMILY SSF141099 1 96 2.09E-34 T 23-04-2016 IPR015073 Atu1913-like LT40_RS12185 6fcd77a1089471b93371d5d2d9fb0bb8 286 Pfam PF02272 DHHA1 domain 248 284 2.5E-4 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 LT40_RS12185 6fcd77a1089471b93371d5d2d9fb0bb8 286 SUPERFAMILY SSF64182 8 282 3.98E-20 T 23-04-2016 LT40_RS19215 f678ebffe5608759ce97f7fcfb992586 271 PANTHER PTHR12110 1 271 8.4E-82 T 23-04-2016 LT40_RS19215 f678ebffe5608759ce97f7fcfb992586 271 PANTHER PTHR12110:SF26 1 271 8.4E-82 T 23-04-2016 LT40_RS19215 f678ebffe5608759ce97f7fcfb992586 271 Pfam PF01261 Xylose isomerase-like TIM barrel 23 221 1.3E-11 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS19215 f678ebffe5608759ce97f7fcfb992586 271 Gene3D G3DSA:3.20.20.150 6 270 3.7E-35 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS19215 f678ebffe5608759ce97f7fcfb992586 271 SUPERFAMILY SSF51658 4 270 1.32E-59 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain LT40_RS18680 ab255056abc4aad175367d39f719e48f 175 SUPERFAMILY SSF54593 65 174 4.68E-19 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS18680 ab255056abc4aad175367d39f719e48f 175 Gene3D G3DSA:3.10.180.10 60 174 1.8E-32 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase LT40_RS02665 09009562d1af2f4c72718d33239cd79b 288 PANTHER PTHR30565:SF3 2 273 1.5E-135 T 23-04-2016 LT40_RS02665 09009562d1af2f4c72718d33239cd79b 288 Pfam PF05067 Manganese containing catalase 1 284 1.7E-95 T 23-04-2016 IPR007760 Manganese catalase LT40_RS02665 09009562d1af2f4c72718d33239cd79b 288 Gene3D G3DSA:1.20.1260.10 1 199 1.4E-76 T 23-04-2016 IPR012347 Ferritin-related LT40_RS02665 09009562d1af2f4c72718d33239cd79b 288 PANTHER PTHR30565 2 273 1.5E-135 T 23-04-2016 LT40_RS02665 09009562d1af2f4c72718d33239cd79b 288 SUPERFAMILY SSF47240 1 285 1.26E-84 T 23-04-2016 IPR009078 Ferritin-like superfamily LT40_RS12860 3ea156297c6879d4466dd7e0440693ea 116 PANTHER PTHR34606 42 115 2.1E-20 T 23-04-2016 LT40_RS12860 3ea156297c6879d4466dd7e0440693ea 116 SMART SM00749 52 116 0.0018 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria LT40_RS12860 3ea156297c6879d4466dd7e0440693ea 116 Pfam PF04972 BON domain 47 110 1.8E-14 T 23-04-2016 IPR007055 BON domain LT40_RS13520 367f0c3d656f5e75bed1364e2b68ab46 243 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 3 236 6.9E-59 T 23-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 LT40_RS13520 367f0c3d656f5e75bed1364e2b68ab46 243 PANTHER PTHR36925 1 242 1.5E-71 T 23-04-2016 LT40_RS17880 7b6ad96ba3684d19055230780a4672f0 369 Pfam PF13439 Glycosyltransferase Family 4 15 162 1.2E-7 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain LT40_RS17880 7b6ad96ba3684d19055230780a4672f0 369 PANTHER PTHR12526:SF399 96 353 1.7E-49 T 23-04-2016 LT40_RS17880 7b6ad96ba3684d19055230780a4672f0 369 SUPERFAMILY SSF53756 7 346 1.12E-61 T 23-04-2016 LT40_RS17880 7b6ad96ba3684d19055230780a4672f0 369 Gene3D G3DSA:3.40.50.2000 173 325 1.2E-20 T 23-04-2016 LT40_RS17880 7b6ad96ba3684d19055230780a4672f0 369 PANTHER PTHR12526 96 353 1.7E-49 T 23-04-2016 LT40_RS17880 7b6ad96ba3684d19055230780a4672f0 369 Pfam PF00534 Glycosyl transferases group 1 170 315 1.0E-24 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS14670 4b3e9b57c7dadf674d194e385c8390c9 343 PIRSF PIRSF003097 44 339 5.8E-65 T 23-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 LT40_RS14670 4b3e9b57c7dadf674d194e385c8390c9 343 Pfam PF02687 FtsX-like permease family 217 338 2.7E-8 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 LT40_RS09135 cda54662bfe87a7432d74063989cb6b4 444 Pfam PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX 132 307 2.1E-10 T 23-04-2016 IPR031811 AlgX, SGNH hydrolase-like domain KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 LT40_RS16765 6ed90e7bc49f1badb4845c467a782ede 355 PANTHER PTHR34220:SF3 12 351 8.6E-90 T 23-04-2016 LT40_RS16765 6ed90e7bc49f1badb4845c467a782ede 355 PANTHER PTHR34220 12 351 8.6E-90 T 23-04-2016 LT40_RS16765 6ed90e7bc49f1badb4845c467a782ede 355 Pfam PF06580 Histidine kinase 158 235 2.4E-23 T 23-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 LT40_RS02450 8dcf44067287253e4f7817ce624ef251 169 PANTHER PTHR35091 2 169 4.7E-63 T 23-04-2016 LT40_RS02450 8dcf44067287253e4f7817ce624ef251 169 PANTHER PTHR35091:SF1 2 169 4.7E-63 T 23-04-2016 LT40_RS02450 8dcf44067287253e4f7817ce624ef251 169 Pfam PF03748 Flagellar basal body-associated protein FliL 70 169 1.9E-23 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 LT40_RS10980 7b06d097a269977680e39af140dfe297 312 Gene3D G3DSA:1.20.1250.20 268 281 1.6E-4 T 23-04-2016 LT40_RS10980 7b06d097a269977680e39af140dfe297 312 Gene3D G3DSA:1.20.1250.20 29 95 1.6E-4 T 23-04-2016 LT40_RS17385 b15d88ae4843190e466d16dcd28b5f04 729 Pfam PF13515 Fusaric acid resistance protein-like 410 530 2.7E-22 T 23-04-2016 LT40_RS17385 b15d88ae4843190e466d16dcd28b5f04 729 PANTHER PTHR30509 5 688 4.4E-295 T 23-04-2016 LT40_RS17385 b15d88ae4843190e466d16dcd28b5f04 729 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 719 1.1E-273 T 23-04-2016 IPR010020 Integral membrane protein, YccS/YhfK LT40_RS17385 b15d88ae4843190e466d16dcd28b5f04 729 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 14 717 1.2E-227 T 23-04-2016 IPR010019 Integral membrane protein, YccS LT40_RS17385 b15d88ae4843190e466d16dcd28b5f04 729 PANTHER PTHR30509:SF8 5 688 4.4E-295 T 23-04-2016 LT40_RS17385 b15d88ae4843190e466d16dcd28b5f04 729 Pfam PF12805 FUSC-like inner membrane protein yccS 70 355 1.2E-111 T 23-04-2016 IPR032692 Integral membrane protein YccS, N-terminal LT40_RS09785 3ae7ecd0b4cebaf45e397de88b5cacd1 82 Pfam PF05532 CsbD-like 4 54 2.9E-14 T 23-04-2016 IPR008462 CsbD-like LT40_RS09785 3ae7ecd0b4cebaf45e397de88b5cacd1 82 SUPERFAMILY SSF69047 1 59 5.49E-12 T 23-04-2016 IPR008462 CsbD-like LT40_RS09785 3ae7ecd0b4cebaf45e397de88b5cacd1 82 Gene3D G3DSA:1.10.1470.10 1 60 4.2E-14 T 23-04-2016 IPR008462 CsbD-like LT40_RS03435 0969c2073f47b25ff73f9ea05a803e05 290 PANTHER PTHR20883 6 240 6.5E-35 T 23-04-2016 LT40_RS03435 0969c2073f47b25ff73f9ea05a803e05 290 SUPERFAMILY SSF51197 3 251 2.66E-56 T 23-04-2016 LT40_RS03435 0969c2073f47b25ff73f9ea05a803e05 290 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 10 224 1.7E-28 T 23-04-2016 IPR008775 Phytanoyl-CoA dioxygenase LT40_RS03435 0969c2073f47b25ff73f9ea05a803e05 290 Gene3D G3DSA:2.60.120.620 4 245 2.8E-52 T 23-04-2016 LT40_RS09530 9da76722d8790297d73efe4ead55c80b 124 Gene3D G3DSA:1.10.10.60 79 118 6.5E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS09530 9da76722d8790297d73efe4ead55c80b 124 SUPERFAMILY SSF46689 50 121 1.16E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 LT40_RS09530 9da76722d8790297d73efe4ead55c80b 124 Pfam PF08765 Mor transcription activator family 52 118 9.3E-9 T 23-04-2016 IPR014875 Mor transcription activator LT40_RS15205 4c98f949152a95335b2769bd6d6d91e1 236 SUPERFAMILY SSF51182 61 234 6.77E-14 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS15205 4c98f949152a95335b2769bd6d6d91e1 236 Pfam PF05899 Protein of unknown function (DUF861) 165 232 3.9E-13 T 23-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 LT40_RS15205 4c98f949152a95335b2769bd6d6d91e1 236 Gene3D G3DSA:2.60.120.10 138 235 1.0E-21 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS15205 4c98f949152a95335b2769bd6d6d91e1 236 Gene3D G3DSA:2.60.120.10 61 115 2.1E-7 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS07495 48b56d5156b941048f312e2f56554248 70 PIRSF PIRSF002599 1 70 4.3E-24 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 LT40_RS07495 48b56d5156b941048f312e2f56554248 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 68 1.5E-29 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS07495 48b56d5156b941048f312e2f56554248 70 PRINTS PR00050 Cold shock protein signature 7 22 2.2E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS07495 48b56d5156b941048f312e2f56554248 70 PRINTS PR00050 Cold shock protein signature 28 37 2.2E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS07495 48b56d5156b941048f312e2f56554248 70 PRINTS PR00050 Cold shock protein signature 43 61 2.2E-16 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LT40_RS07495 48b56d5156b941048f312e2f56554248 70 Gene3D G3DSA:2.40.50.140 5 68 2.7E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS07495 48b56d5156b941048f312e2f56554248 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 23-04-2016 IPR019844 Cold-shock conserved site LT40_RS07495 48b56d5156b941048f312e2f56554248 70 SMART SM00357 6 70 5.6E-26 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 LT40_RS07495 48b56d5156b941048f312e2f56554248 70 SUPERFAMILY SSF50249 3 68 2.57E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS07495 48b56d5156b941048f312e2f56554248 70 PANTHER PTHR11544 1 69 6.5E-35 T 23-04-2016 LT40_RS19115 46db99c4a24a0234394e01e3dbe41be6 295 SUPERFAMILY SSF103481 45 146 4.05E-11 T 23-04-2016 LT40_RS19115 46db99c4a24a0234394e01e3dbe41be6 295 SUPERFAMILY SSF103481 188 291 1.44E-12 T 23-04-2016 LT40_RS19115 46db99c4a24a0234394e01e3dbe41be6 295 Pfam PF00892 EamA-like transporter family 15 142 4.5E-17 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS19115 46db99c4a24a0234394e01e3dbe41be6 295 Pfam PF00892 EamA-like transporter family 152 285 4.2E-17 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 LT40_RS19115 46db99c4a24a0234394e01e3dbe41be6 295 PANTHER PTHR32322 1 291 1.5E-125 T 23-04-2016 LT40_RS19115 46db99c4a24a0234394e01e3dbe41be6 295 PANTHER PTHR32322:SF8 1 291 1.5E-125 T 23-04-2016 LT40_RS06775 a9e29e5bf6e32310e2e5a3575f76e06f 312 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 309 1.0E-139 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 LT40_RS06775 a9e29e5bf6e32310e2e5a3575f76e06f 312 PANTHER PTHR11061 1 312 1.2E-96 T 23-04-2016 LT40_RS06775 a9e29e5bf6e32310e2e5a3575f76e06f 312 SUPERFAMILY SSF53335 9 286 3.93E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS06775 a9e29e5bf6e32310e2e5a3575f76e06f 312 PANTHER PTHR11061:SF34 1 312 1.2E-96 T 23-04-2016 LT40_RS06775 a9e29e5bf6e32310e2e5a3575f76e06f 312 Gene3D G3DSA:3.40.50.150 43 309 2.9E-54 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS08670 56a1795c17dbd198554b1047ec799f99 101 Pfam PF07102 Protein of unknown function (DUF1364) 5 98 2.3E-38 T 23-04-2016 IPR010774 Protein of unknown function DUF1364 LT40_RS08670 56a1795c17dbd198554b1047ec799f99 101 Gene3D G3DSA:3.30.50.20 21 98 1.4E-36 T 23-04-2016 LT40_RS17885 70eecc40379fe67ea290f0f463db6fea 433 SUPERFAMILY SSF51445 26 328 8.4E-57 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS17885 70eecc40379fe67ea290f0f463db6fea 433 Gene3D G3DSA:3.20.20.80 28 327 8.1E-53 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS14305 1a7dc68b724ca3e01e3625c9f58e6464 207 SUPERFAMILY SSF55718 24 119 1.29E-7 T 23-04-2016 IPR003033 SCP2 sterol-binding domain LT40_RS14305 1a7dc68b724ca3e01e3625c9f58e6464 207 Pfam PF02036 SCP-2 sterol transfer family 14 111 3.3E-12 T 23-04-2016 IPR003033 SCP2 sterol-binding domain LT40_RS14305 1a7dc68b724ca3e01e3625c9f58e6464 207 PANTHER PTHR38693 6 205 9.7E-52 T 23-04-2016 LT40_RS14305 1a7dc68b724ca3e01e3625c9f58e6464 207 PANTHER PTHR38693:SF1 6 205 9.7E-52 T 23-04-2016 LT40_RS20720 5955c8adbcfa4fe08cb38cf38b819c92 286 PIRSF PIRSF028200 5 286 6.0E-84 T 23-04-2016 IPR016875 Uncharacterised conserved protein UCP028200 LT40_RS06110 f4ab21074b3cdaf3de3a10a33e0a51f4 260 Pfam PF14518 Iron-containing redox enzyme 55 225 1.9E-10 T 23-04-2016 IPR028201 PqqC-like protein LT40_RS06110 f4ab21074b3cdaf3de3a10a33e0a51f4 260 SUPERFAMILY SSF48613 19 243 3.71E-41 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LT40_RS06110 f4ab21074b3cdaf3de3a10a33e0a51f4 260 Gene3D G3DSA:1.20.910.10 18 249 2.4E-48 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 LT40_RS13610 9ad12b667a29f47cc0f14891a0595653 115 Pfam PF04355 SmpA / OmlA family 32 100 2.8E-14 T 23-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 LT40_RS16590 49a0b6fcaa1fa7d43d3a32400b1d05c2 117 Pfam PF03692 Putative zinc- or iron-chelating domain 19 81 4.7E-10 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein LT40_RS16590 49a0b6fcaa1fa7d43d3a32400b1d05c2 117 PIRSF PIRSF029611 1 117 1.4E-70 T 23-04-2016 IPR016928 Uncharacterised conserved protein UCP029611 LT40_RS00345 578e10f6a61c309c74ec23c386860b41 121 SMART SM00507 25 81 0.0018 T 23-04-2016 IPR003615 HNH nuclease LT40_RS00345 578e10f6a61c309c74ec23c386860b41 121 Pfam PF01844 HNH endonuclease 38 86 2.6E-12 T 23-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 LT40_RS18380 d9dac43286d48fa21d0b5cdb26095755 110 Gene3D G3DSA:3.90.470.10 1 109 3.1E-42 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LT40_RS18380 d9dac43286d48fa21d0b5cdb26095755 110 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 1.0E-33 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LT40_RS18380 d9dac43286d48fa21d0b5cdb26095755 110 PANTHER PTHR13501 1 109 6.7E-50 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 LT40_RS18380 d9dac43286d48fa21d0b5cdb26095755 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LT40_RS18380 d9dac43286d48fa21d0b5cdb26095755 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 8.9E-45 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 LT40_RS18380 d9dac43286d48fa21d0b5cdb26095755 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 27.804 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 LT40_RS18380 d9dac43286d48fa21d0b5cdb26095755 110 SUPERFAMILY SSF54843 1 109 6.8E-42 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LT40_RS00595 abad2ccd8d5131ea640b8f5a3db9efb9 134 Pfam PF13652 Putative quorum-sensing-regulated virulence factor 22 132 1.4E-57 T 23-04-2016 IPR025203 Putative quorum-sensing-regulated virulence factor, QSregVF LT40_RS00870 a4c14f545beddd89e148c6ef2b2c00d3 417 Pfam PF02653 Branched-chain amino acid transport system / permease component 113 398 3.9E-53 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS00870 a4c14f545beddd89e148c6ef2b2c00d3 417 Pfam PF11862 Domain of unknown function (DUF3382) 3 104 5.7E-16 T 23-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal LT40_RS00870 a4c14f545beddd89e148c6ef2b2c00d3 417 PANTHER PTHR30482 62 417 1.0E-188 T 23-04-2016 LT40_RS00870 a4c14f545beddd89e148c6ef2b2c00d3 417 PANTHER PTHR30482:SF9 62 417 1.0E-188 T 23-04-2016 LT40_RS13005 6b47b26aa71db33eec0bb2e302d5dcdf 144 Gene3D G3DSA:3.30.530.20 4 144 4.1E-46 T 23-04-2016 IPR023393 START-like domain LT40_RS13005 6b47b26aa71db33eec0bb2e302d5dcdf 144 SUPERFAMILY SSF55961 1 143 5.32E-35 T 23-04-2016 LT40_RS13005 6b47b26aa71db33eec0bb2e302d5dcdf 144 PANTHER PTHR12901:SF7 3 144 1.5E-69 T 23-04-2016 LT40_RS13005 6b47b26aa71db33eec0bb2e302d5dcdf 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 135 2.0E-32 T 23-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain LT40_RS13005 6b47b26aa71db33eec0bb2e302d5dcdf 144 PANTHER PTHR12901 3 144 1.5E-69 T 23-04-2016 LT40_RS17990 9113d2d4b5d8cb15c5988add3ec72c13 204 Pfam PF00665 Integrase core domain 38 152 4.9E-30 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 LT40_RS17990 9113d2d4b5d8cb15c5988add3ec72c13 204 PANTHER PTHR32552 1 191 3.5E-53 T 23-04-2016 LT40_RS17990 9113d2d4b5d8cb15c5988add3ec72c13 204 SUPERFAMILY SSF53098 31 191 1.82E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS17990 9113d2d4b5d8cb15c5988add3ec72c13 204 Gene3D G3DSA:3.30.420.10 32 186 1.5E-34 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 LT40_RS10130 e905d9681eb554a72aadadbe249a4d2c 453 Gene3D G3DSA:1.20.1250.20 234 434 2.3E-35 T 23-04-2016 LT40_RS10130 e905d9681eb554a72aadadbe249a4d2c 453 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 19 425 5.7E-159 T 23-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 LT40_RS10130 e905d9681eb554a72aadadbe249a4d2c 453 Gene3D G3DSA:1.20.1250.20 5 207 1.3E-47 T 23-04-2016 LT40_RS10130 e905d9681eb554a72aadadbe249a4d2c 453 PANTHER PTHR11662:SF18 5 453 1.1E-230 T 23-04-2016 LT40_RS10130 e905d9681eb554a72aadadbe249a4d2c 453 SUPERFAMILY SSF103473 3 434 8.63E-83 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS10130 e905d9681eb554a72aadadbe249a4d2c 453 PIRSF PIRSF002808 3 440 4.2E-44 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 LT40_RS10130 e905d9681eb554a72aadadbe249a4d2c 453 Pfam PF07690 Major Facilitator Superfamily 17 305 6.7E-50 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS10130 e905d9681eb554a72aadadbe249a4d2c 453 PANTHER PTHR11662 5 453 1.1E-230 T 23-04-2016 LT40_RS20745 20d81ef2bf092f26196d123b2591a7b4 63 Gene3D G3DSA:1.10.1470.10 5 62 2.9E-15 T 23-04-2016 IPR008462 CsbD-like LT40_RS20745 20d81ef2bf092f26196d123b2591a7b4 63 SUPERFAMILY SSF69047 5 61 1.44E-12 T 23-04-2016 IPR008462 CsbD-like LT40_RS20745 20d81ef2bf092f26196d123b2591a7b4 63 Pfam PF05532 CsbD-like 6 58 2.8E-15 T 23-04-2016 IPR008462 CsbD-like LT40_RS14455 b689903559fdec2fa802bea6d3be967c 199 Pfam PF13511 Domain of unknown function (DUF4124) 7 59 1.2E-12 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 LT40_RS10075 0ab70b6957df55ad656f91c665023fda 381 SUPERFAMILY SSF50952 25 378 7.72E-46 T 23-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 LT40_RS10075 0ab70b6957df55ad656f91c665023fda 381 Pfam PF07995 Glucose / Sorbosone dehydrogenase 45 377 8.2E-141 T 23-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 LT40_RS10075 0ab70b6957df55ad656f91c665023fda 381 Gene3D G3DSA:2.120.10.30 27 378 2.6E-110 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like LT40_RS10075 0ab70b6957df55ad656f91c665023fda 381 PANTHER PTHR19328 34 379 1.6E-87 T 23-04-2016 LT40_RS03840 2ab08685da3892d46d2c13819a71384a 100 Pfam PF13466 STAS domain 13 94 3.6E-16 T 23-04-2016 IPR002645 STAS domain LT40_RS03840 2ab08685da3892d46d2c13819a71384a 100 Gene3D G3DSA:3.30.750.24 13 97 2.7E-16 T 23-04-2016 IPR002645 STAS domain LT40_RS03840 2ab08685da3892d46d2c13819a71384a 100 SUPERFAMILY SSF52091 13 98 8.24E-17 T 23-04-2016 IPR002645 STAS domain LT40_RS19665 52c22f89a52cb898ba9f17508065f90e 83 Gene3D G3DSA:3.30.920.30 19 76 3.4E-6 T 23-04-2016 LT40_RS19665 52c22f89a52cb898ba9f17508065f90e 83 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 20 80 1.1E-13 T 23-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 LT40_RS19665 52c22f89a52cb898ba9f17508065f90e 83 SUPERFAMILY SSF54786 19 77 5.1E-9 T 23-04-2016 LT40_RS15300 b3afbebac6332fe8fcceb2cd1ed00a5b 263 SUPERFAMILY SSF53850 25 255 1.78E-63 T 23-04-2016 LT40_RS15300 b3afbebac6332fe8fcceb2cd1ed00a5b 263 Pfam PF03180 NLPA lipoprotein 27 254 6.9E-69 T 23-04-2016 IPR004872 Lipoprotein NlpA family LT40_RS15300 b3afbebac6332fe8fcceb2cd1ed00a5b 263 PANTHER PTHR30429 1 262 2.9E-94 T 23-04-2016 IPR004872 Lipoprotein NlpA family LT40_RS15300 b3afbebac6332fe8fcceb2cd1ed00a5b 263 Gene3D G3DSA:3.40.190.10 22 152 3.4E-46 T 23-04-2016 LT40_RS16295 ab1d8c62ea05036963cf04c9d075277c 403 PANTHER PTHR30574 27 391 3.2E-96 T 23-04-2016 LT40_RS16295 ab1d8c62ea05036963cf04c9d075277c 403 PANTHER PTHR30574:SF5 27 391 3.2E-96 T 23-04-2016 LT40_RS16295 ab1d8c62ea05036963cf04c9d075277c 403 Pfam PF04143 Sulphur transport 54 380 1.4E-75 T 23-04-2016 IPR007272 Sulphur transport domain LT40_RS07195 0510ed16d31083823f7e17c4412892db 129 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 17 126 1.9E-19 T 23-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III LT40_RS16745 c8fa546bc2bd7be2b7236ab91dd4f2c2 79 Pfam PF06945 Protein of unknown function (DUF1289) 23 69 6.9E-18 T 23-04-2016 IPR010710 Protein of unknown function DUF1289 LT40_RS16745 c8fa546bc2bd7be2b7236ab91dd4f2c2 79 PANTHER PTHR35175 20 78 3.1E-13 T 23-04-2016 LT40_RS05795 06c824d2cddee349bde123540d349e7e 198 PANTHER PTHR36917 1 198 1.1E-62 T 23-04-2016 LT40_RS05795 06c824d2cddee349bde123540d349e7e 198 PANTHER PTHR36917:SF1 1 198 1.1E-62 T 23-04-2016 LT40_RS05795 06c824d2cddee349bde123540d349e7e 198 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 189 17.644 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 LT40_RS05795 06c824d2cddee349bde123540d349e7e 198 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 188 4.1E-54 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 LT40_RS05795 06c824d2cddee349bde123540d349e7e 198 Pfam PF04279 Intracellular septation protein A 1 188 5.0E-59 T 23-04-2016 IPR006008 Intracellular septation protein A GO:0016021 LT40_RS08110 164f3d20dba9f1b679f164988208213d 211 PANTHER PTHR30086 3 210 9.5E-34 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS08110 164f3d20dba9f1b679f164988208213d 211 Pfam PF01810 LysE type translocator 16 208 1.1E-31 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS09675 695e3f0e6a0e5e9bde283c772e2c879f 357 Pfam PF04632 Fusaric acid resistance protein family 31 320 6.6E-19 T 23-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 LT40_RS09675 695e3f0e6a0e5e9bde283c772e2c879f 357 PANTHER PTHR30509 11 265 1.9E-23 T 23-04-2016 LT40_RS09675 695e3f0e6a0e5e9bde283c772e2c879f 357 PANTHER PTHR30509 284 301 1.9E-23 T 23-04-2016 LT40_RS16810 3463097767342a61d839d4d20d06243f 166 Pfam PF09523 Protein of unknown function (DUF2390) 4 110 4.2E-32 T 23-04-2016 IPR012659 Conserved hypothetical protein CHP02444 LT40_RS16810 3463097767342a61d839d4d20d06243f 166 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 4 112 1.7E-34 T 23-04-2016 IPR012659 Conserved hypothetical protein CHP02444 LT40_RS06550 9fce1be5f908d8c0f8d1df657f6dbfbd 276 Pfam PF10977 Protein of unknown function (DUF2797) 39 272 4.0E-96 T 23-04-2016 IPR021246 Protein of unknown function DUF2797 LT40_RS03015 9a0a5bf2c810bb64f0aece865a0dd7b9 368 SUPERFAMILY SSF88713 169 361 2.53E-22 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LT40_RS03015 9a0a5bf2c810bb64f0aece865a0dd7b9 368 Pfam PF01522 Polysaccharide deacetylase 173 288 1.9E-5 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LT40_RS03015 9a0a5bf2c810bb64f0aece865a0dd7b9 368 Gene3D G3DSA:3.20.20.370 173 350 6.9E-17 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LT40_RS02705 d3ab4acc475bda7e44e0a4fcb3de9782 225 SUPERFAMILY SSF55729 53 151 1.69E-9 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS02705 d3ab4acc475bda7e44e0a4fcb3de9782 225 Gene3D G3DSA:3.40.630.30 65 151 8.2E-7 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS10950 fbe6b746c342fb2e3e94199f3310890b 87 Pfam PF07865 Protein of unknown function (DUF1652) 9 73 2.5E-19 T 23-04-2016 IPR012448 Protein of unknown function DUF1652 LT40_RS02045 fb4aaf1447e0018929233787e9520785 365 SMART SM00382 34 226 2.7E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain LT40_RS02045 fb4aaf1447e0018929233787e9520785 365 SUPERFAMILY SSF50331 243 358 4.25E-14 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal LT40_RS02045 fb4aaf1447e0018929233787e9520785 365 PANTHER PTHR24220 5 297 1.7E-93 T 23-04-2016 LT40_RS02045 fb4aaf1447e0018929233787e9520785 365 Gene3D G3DSA:2.40.50.140 288 342 2.1E-6 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold LT40_RS02045 fb4aaf1447e0018929233787e9520785 365 SUPERFAMILY SSF52540 4 251 1.6E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02045 fb4aaf1447e0018929233787e9520785 365 Gene3D G3DSA:3.40.50.300 4 238 7.7E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS02045 fb4aaf1447e0018929233787e9520785 365 PANTHER PTHR24220:SF151 5 297 1.7E-93 T 23-04-2016 LT40_RS02045 fb4aaf1447e0018929233787e9520785 365 Pfam PF00005 ABC transporter 33 168 1.0E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LT40_RS13410 ced60989aa4c675e91e355ca72834766 288 SUPERFAMILY SSF53474 39 267 9.21E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS13410 ced60989aa4c675e91e355ca72834766 288 Gene3D G3DSA:3.40.50.1820 40 266 2.5E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold LT40_RS13410 ced60989aa4c675e91e355ca72834766 288 Pfam PF07859 alpha/beta hydrolase fold 69 168 2.6E-16 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LT40_RS13410 ced60989aa4c675e91e355ca72834766 288 PANTHER PTHR23024 38 259 5.8E-44 T 23-04-2016 LT40_RS11770 4a276195771d8562b77cb37076f5475e 232 Pfam PF02586 SOS response associated peptidase (SRAP) 1 217 2.0E-51 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS11770 4a276195771d8562b77cb37076f5475e 232 SUPERFAMILY SSF143081 2 228 2.09E-62 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS11770 4a276195771d8562b77cb37076f5475e 232 PANTHER PTHR13604 2 231 4.5E-57 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS11770 4a276195771d8562b77cb37076f5475e 232 Gene3D G3DSA:3.90.1680.10 1 228 4.0E-64 T 23-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- LT40_RS14155 8fbc4ce7cebb69063df0002b164d27db 210 Gene3D G3DSA:3.30.1360.120 119 206 8.3E-6 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LT40_RS14155 8fbc4ce7cebb69063df0002b164d27db 210 TIGRFAM TIGR01375 soxG: sarcosine oxidase, gamma subunit family 52 203 3.7E-53 T 23-04-2016 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 LT40_RS14155 8fbc4ce7cebb69063df0002b164d27db 210 SUPERFAMILY SSF103025 85 206 9.73E-24 T 23-04-2016 LT40_RS14155 8fbc4ce7cebb69063df0002b164d27db 210 Pfam PF04268 Sarcosine oxidase, gamma subunit family 53 203 4.5E-52 T 23-04-2016 IPR007375 Sarcosine oxidase, gamma subunit KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 LT40_RS13590 82d63c38d1b8adc90e85aca518912612 856 SUPERFAMILY SSF159501 617 830 4.08E-31 T 23-04-2016 LT40_RS08775 a12f2577a8aa3e5b9c010145a0e7f31d 112 Pfam PF05939 Phage minor tail protein 4 109 1.4E-32 T 23-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail LT40_RS14245 37843faf98b95bb869b2c1993257226f 304 Pfam PF07751 Abi-like protein 37 219 1.4E-46 T 23-04-2016 IPR011664 Abortive infection system protein AbiD/AbiF-like LT40_RS13345 3f82fbdebaf06eeb08fba267bffb1e7a 343 PANTHER PTHR18640 7 328 6.7E-90 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter LT40_RS13345 3f82fbdebaf06eeb08fba267bffb1e7a 343 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 13 324 3.1E-98 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter LT40_RS13345 3f82fbdebaf06eeb08fba267bffb1e7a 343 PIRSF PIRSF026166 1 340 1.7E-100 T 23-04-2016 IPR016833 Putative sodium bile acid cotransporter LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 SUPERFAMILY SSF64518 441 680 3.01E-14 T 23-04-2016 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 PANTHER PTHR30033:SF1 1 423 1.5E-90 T 23-04-2016 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 PANTHER PTHR30033:SF1 459 680 1.5E-90 T 23-04-2016 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 SUPERFAMILY SSF64518 138 451 7.45E-19 T 23-04-2016 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 4 370 4.6E-66 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 Pfam PF00460 Flagella basal body rod protein 6 34 5.3E-5 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 618 678 2.8E-7 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 PANTHER PTHR30033 1 423 1.5E-90 T 23-04-2016 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 PANTHER PTHR30033 459 680 1.5E-90 T 23-04-2016 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 1.3E-15 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 1.3E-15 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 PRINTS PR01005 Flagellar hook-associated protein signature 213 231 1.3E-15 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 1.3E-15 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 1.3E-15 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LT40_RS02345 74eb0672e19af07a8646179eae3969df 680 PRINTS PR01005 Flagellar hook-associated protein signature 411 428 1.3E-15 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 LT40_RS15595 50f2015a3affae456f8ca7fdff4cd7b5 106 Pfam PF09498 Protein of unknown function (DUF2388) 37 105 1.0E-29 T 23-04-2016 IPR012661 Conserved hypothetical protein CHP02448 LT40_RS15595 50f2015a3affae456f8ca7fdff4cd7b5 106 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 105 3.8E-34 T 23-04-2016 IPR012661 Conserved hypothetical protein CHP02448 LT40_RS14220 ed0ccbe5774467bfc7d3ce4898e54deb 175 Pfam PF04351 Pilus assembly protein, PilP 27 171 8.2E-47 T 23-04-2016 IPR007446 Pilus assembly protein PilP LT40_RS14220 ed0ccbe5774467bfc7d3ce4898e54deb 175 PIRSF PIRSF016481 2 175 2.1E-58 T 23-04-2016 IPR007446 Pilus assembly protein PilP LT40_RS08055 2c0901d90e6e7ce915895bd97a6815b4 110 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 21 95 1.3E-16 T 23-04-2016 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 LT40_RS00225 9a0ada29511661bfc117dbf0f3bb3c11 476 Pfam PF01266 FAD dependent oxidoreductase 4 373 1.3E-31 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 LT40_RS00225 9a0ada29511661bfc117dbf0f3bb3c11 476 SUPERFAMILY SSF51905 336 412 2.46E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00225 9a0ada29511661bfc117dbf0f3bb3c11 476 SUPERFAMILY SSF51905 3 235 2.46E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00225 9a0ada29511661bfc117dbf0f3bb3c11 476 PANTHER PTHR13847 1 391 1.0E-22 T 23-04-2016 LT40_RS00225 9a0ada29511661bfc117dbf0f3bb3c11 476 Gene3D G3DSA:3.50.50.60 336 391 1.1E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00225 9a0ada29511661bfc117dbf0f3bb3c11 476 Gene3D G3DSA:3.50.50.60 3 89 1.1E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS00225 9a0ada29511661bfc117dbf0f3bb3c11 476 Gene3D G3DSA:3.50.50.60 153 234 1.1E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09645 e87fcbd9488fba23ed6f3ca8ebc19434 252 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 246 8.7E-45 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 LT40_RS09645 e87fcbd9488fba23ed6f3ca8ebc19434 252 Gene3D G3DSA:3.90.226.10 2 250 3.5E-63 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS09645 e87fcbd9488fba23ed6f3ca8ebc19434 252 PANTHER PTHR11941 1 247 7.9E-63 T 23-04-2016 LT40_RS09645 e87fcbd9488fba23ed6f3ca8ebc19434 252 SUPERFAMILY SSF52096 2 251 2.23E-66 T 23-04-2016 IPR029045 ClpP/crotonase-like domain LT40_RS07475 74c2a49867188eb14f620409c3dd5c6d 339 PANTHER PTHR12304:SF19 1 338 1.7E-145 T 23-04-2016 LT40_RS07475 74c2a49867188eb14f620409c3dd5c6d 339 SUPERFAMILY SSF53590 29 337 2.62E-96 T 23-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LT40_RS07475 74c2a49867188eb14f620409c3dd5c6d 339 Gene3D G3DSA:3.90.245.10 28 337 2.0E-98 T 23-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LT40_RS07475 74c2a49867188eb14f620409c3dd5c6d 339 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 31 315 1.4E-65 T 23-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LT40_RS07475 74c2a49867188eb14f620409c3dd5c6d 339 PANTHER PTHR12304 1 338 1.7E-145 T 23-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase LT40_RS15765 2b740fb61074bed3d3653b856529e312 509 PANTHER PTHR11814 7 488 6.9E-198 T 23-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 LT40_RS15765 2b740fb61074bed3d3653b856529e312 509 PANTHER PTHR11814:SF123 7 488 6.9E-198 T 23-04-2016 LT40_RS15765 2b740fb61074bed3d3653b856529e312 509 Pfam PF00916 Sulfate permease family 13 382 7.3E-60 T 23-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 LT40_RS09000 4ae5c32c0946b259aec875af690d05d2 388 Pfam PF10005 zinc-ribbon domain 27 120 2.3E-25 T 23-04-2016 IPR011201 Zinc-ribbon domain, bacteria LT40_RS09000 4ae5c32c0946b259aec875af690d05d2 388 PIRSF PIRSF012641 23 387 4.9E-131 T 23-04-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase LT40_RS09000 4ae5c32c0946b259aec875af690d05d2 388 Pfam PF15887 Putative zinc-binding metallo-peptidase 126 373 4.6E-106 T 23-04-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase LT40_RS19585 bd46d83eb691d2ba23f06be0e7d31101 289 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 19 125 6.5E-34 T 23-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- LT40_RS19585 bd46d83eb691d2ba23f06be0e7d31101 289 PANTHER PTHR30487:SF0 1 37 3.4E-114 T 23-04-2016 LT40_RS19585 bd46d83eb691d2ba23f06be0e7d31101 289 PANTHER PTHR30487:SF0 58 287 3.4E-114 T 23-04-2016 LT40_RS19585 bd46d83eb691d2ba23f06be0e7d31101 289 PANTHER PTHR30487 1 37 3.4E-114 T 23-04-2016 LT40_RS19585 bd46d83eb691d2ba23f06be0e7d31101 289 PANTHER PTHR30487 58 287 3.4E-114 T 23-04-2016 LT40_RS19585 bd46d83eb691d2ba23f06be0e7d31101 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 1.3E-26 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- LT40_RS19585 bd46d83eb691d2ba23f06be0e7d31101 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 144 161 1.3E-26 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- LT40_RS19585 bd46d83eb691d2ba23f06be0e7d31101 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 1.3E-26 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- LT40_RS19585 bd46d83eb691d2ba23f06be0e7d31101 289 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 1.3E-26 T 23-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- LT40_RS19585 bd46d83eb691d2ba23f06be0e7d31101 289 Pfam PF01478 Type IV leader peptidase family 135 244 1.1E-25 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 LT40_RS20555 7c00d4a19a7ccdbcb0778f0f05d64391 228 Pfam PF06904 Extensin-like protein C-terminus 57 228 7.3E-65 T 23-04-2016 IPR009683 Extensin-like, C-terminal LT40_RS04410 7949e7f2a6b4065fdc3aa3d70a632027 112 Gene3D G3DSA:3.30.70.900 14 100 1.5E-14 T 23-04-2016 LT40_RS04410 7949e7f2a6b4065fdc3aa3d70a632027 112 Pfam PF03992 Antibiotic biosynthesis monooxygenase 16 85 7.1E-11 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain LT40_RS04410 7949e7f2a6b4065fdc3aa3d70a632027 112 SUPERFAMILY SSF54909 14 97 3.43E-14 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS16245 68e76724612a9515305bc5bfae64ec4d 283 PANTHER PTHR41542:SF1 1 283 2.2E-75 T 23-04-2016 LT40_RS16245 68e76724612a9515305bc5bfae64ec4d 283 SUPERFAMILY SSF54427 141 281 2.37E-7 T 23-04-2016 IPR032710 NTF2-like domain LT40_RS16245 68e76724612a9515305bc5bfae64ec4d 283 PANTHER PTHR41542 1 283 2.2E-75 T 23-04-2016 LT40_RS16245 68e76724612a9515305bc5bfae64ec4d 283 Pfam PF04280 Tim44-like domain 153 281 1.6E-9 T 23-04-2016 IPR007379 Tim44-like domain LT40_RS16245 68e76724612a9515305bc5bfae64ec4d 283 SMART SM00978 151 282 2.5E-26 T 23-04-2016 IPR007379 Tim44-like domain LT40_RS15585 5354ae8fb5157acc1c4fe934ffc8058c 105 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 104 5.6E-39 T 23-04-2016 IPR012661 Conserved hypothetical protein CHP02448 LT40_RS15585 5354ae8fb5157acc1c4fe934ffc8058c 105 Pfam PF09498 Protein of unknown function (DUF2388) 36 104 5.4E-31 T 23-04-2016 IPR012661 Conserved hypothetical protein CHP02448 LT40_RS15610 d1c29bcc9fb25703ae01857fcc630e47 247 PANTHER PTHR30060:SF1 1 247 6.9E-119 T 23-04-2016 LT40_RS15610 d1c29bcc9fb25703ae01857fcc630e47 247 Pfam PF03741 Integral membrane protein TerC family 14 204 1.3E-50 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 LT40_RS15610 d1c29bcc9fb25703ae01857fcc630e47 247 PANTHER PTHR30060 1 247 6.9E-119 T 23-04-2016 LT40_RS02820 447ba7056dcdecf67d8471fb6dcd1d46 134 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 96 120 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site LT40_RS02820 447ba7056dcdecf67d8471fb6dcd1d46 134 PANTHER PTHR33823:SF2 9 133 6.8E-26 T 23-04-2016 LT40_RS02820 447ba7056dcdecf67d8471fb6dcd1d46 134 SUPERFAMILY SSF57716 93 131 1.71E-8 T 23-04-2016 LT40_RS02820 447ba7056dcdecf67d8471fb6dcd1d46 134 PANTHER PTHR33823 9 133 6.8E-26 T 23-04-2016 LT40_RS02820 447ba7056dcdecf67d8471fb6dcd1d46 134 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 92 126 1.8E-11 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 LT40_RS02820 447ba7056dcdecf67d8471fb6dcd1d46 134 SUPERFAMILY SSF109635 2 91 1.57E-21 T 23-04-2016 LT40_RS17300 c48dc22beb06e66ed60c2d147510f009 419 PANTHER PTHR10110:SF86 1 405 5.6E-87 T 23-04-2016 LT40_RS17300 c48dc22beb06e66ed60c2d147510f009 419 Pfam PF00999 Sodium/hydrogen exchanger family 8 405 9.5E-65 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LT40_RS17300 c48dc22beb06e66ed60c2d147510f009 419 PANTHER PTHR10110 1 405 5.6E-87 T 23-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 LT40_RS08385 37da01657b13dda8e6ab820957be8fb4 146 SUPERFAMILY SSF52821 27 130 9.04E-23 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS08385 37da01657b13dda8e6ab820957be8fb4 146 Pfam PF00581 Rhodanese-like domain 33 122 1.2E-10 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS08385 37da01657b13dda8e6ab820957be8fb4 146 SMART SM00450 30 127 6.0E-13 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS08385 37da01657b13dda8e6ab820957be8fb4 146 Gene3D G3DSA:3.40.250.10 30 130 1.1E-18 T 23-04-2016 IPR001763 Rhodanese-like domain LT40_RS15715 59784e84a14710b84656a1293c759cdd 160 Gene3D G3DSA:1.10.10.10 22 92 1.7E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15715 59784e84a14710b84656a1293c759cdd 160 Pfam PF01475 Ferric uptake regulator family 30 150 3.6E-9 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 LT40_RS15715 59784e84a14710b84656a1293c759cdd 160 PANTHER PTHR33202 6 158 1.8E-66 T 23-04-2016 LT40_RS15715 59784e84a14710b84656a1293c759cdd 160 SUPERFAMILY SSF46785 24 155 6.85E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15715 59784e84a14710b84656a1293c759cdd 160 PANTHER PTHR33202:SF6 6 158 1.8E-66 T 23-04-2016 LT40_RS04090 ce7caae8d74b083026bbff6c683c2f90 151 Pfam PF05258 Protein of unknown function (DUF721) 18 97 1.2E-11 T 23-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 LT40_RS03000 17ecf8377297d86aa1a08629e48e9969 1489 Gene3D G3DSA:3.40.390.10 1220 1380 4.0E-7 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LT40_RS03115 fb114c95412e1935a35c2a41f32fee27 317 PANTHER PTHR13393 5 307 1.1E-126 T 23-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 LT40_RS03115 fb114c95412e1935a35c2a41f32fee27 317 Pfam PF05971 Protein of unknown function (DUF890) 5 302 3.1E-133 T 23-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 LT40_RS03115 fb114c95412e1935a35c2a41f32fee27 317 SUPERFAMILY SSF53335 44 302 4.61E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS03115 fb114c95412e1935a35c2a41f32fee27 317 PIRSF PIRSF029038 1 315 1.1E-152 T 23-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 LT40_RS03115 fb114c95412e1935a35c2a41f32fee27 317 PANTHER PTHR13393:SF0 5 307 1.1E-126 T 23-04-2016 LT40_RS03115 fb114c95412e1935a35c2a41f32fee27 317 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 6 305 53.876 T 23-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 LT40_RS03115 fb114c95412e1935a35c2a41f32fee27 317 Gene3D G3DSA:3.40.50.150 97 286 2.5E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS18510 20c4a9d180f526a7e8b066a173fbfdf3 377 Pfam PF01757 Acyltransferase family 8 351 8.9E-21 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LT40_RS18510 20c4a9d180f526a7e8b066a173fbfdf3 377 PANTHER PTHR23028 10 305 1.5E-27 T 23-04-2016 LT40_RS18510 20c4a9d180f526a7e8b066a173fbfdf3 377 PANTHER PTHR23028 331 366 1.5E-27 T 23-04-2016 LT40_RS15080 c368a50780c0dd8e35b71a57c0de3dfa 298 Pfam PF13649 Methyltransferase domain 138 235 4.9E-6 T 23-04-2016 LT40_RS15080 c368a50780c0dd8e35b71a57c0de3dfa 298 SUPERFAMILY SSF53335 109 272 1.58E-13 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS15080 c368a50780c0dd8e35b71a57c0de3dfa 298 Gene3D G3DSA:3.40.50.150 131 247 3.7E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LT40_RS06370 24b246f8350f58afa8eddb796b8a1bf6 373 Gene3D G3DSA:3.20.20.80 41 334 3.8E-25 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LT40_RS06370 24b246f8350f58afa8eddb796b8a1bf6 373 SUPERFAMILY SSF51445 13 347 1.25E-45 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily LT40_RS07775 d2ced0cdfc3c77b92c48131b993e5abb 200 Pfam PF06635 Nodulation protein NolV 13 191 1.8E-8 T 23-04-2016 IPR010586 Nodulation NolV GO:0009877 LT40_RS13925 7d9b4bee6679c231aaa30ab5b97b8c13 299 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 51 282 1.8E-80 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 LT40_RS13925 7d9b4bee6679c231aaa30ab5b97b8c13 299 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 285 47.76 T 23-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 LT40_RS13925 7d9b4bee6679c231aaa30ab5b97b8c13 299 PANTHER PTHR10067 1 292 2.4E-107 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 LT40_RS13925 7d9b4bee6679c231aaa30ab5b97b8c13 299 Pfam PF02666 Phosphatidylserine decarboxylase 63 282 1.6E-60 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 LT40_RS11170 df762c104246afd7f8cc9dd24c16d221 240 PANTHER PTHR13256 12 226 9.7E-97 T 23-04-2016 LT40_RS11170 df762c104246afd7f8cc9dd24c16d221 240 Pfam PF13302 Acetyltransferase (GNAT) domain 40 178 1.1E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 LT40_RS11170 df762c104246afd7f8cc9dd24c16d221 240 PANTHER PTHR13256:SF22 12 226 9.7E-97 T 23-04-2016 LT40_RS11170 df762c104246afd7f8cc9dd24c16d221 240 Gene3D G3DSA:3.40.630.30 19 219 1.1E-58 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS11170 df762c104246afd7f8cc9dd24c16d221 240 SUPERFAMILY SSF55729 31 203 9.38E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase LT40_RS01440 b55ea287c4e458c97dcfae2dc569064e 332 SUPERFAMILY SSF53187 14 323 1.3E-52 T 23-04-2016 LT40_RS01440 b55ea287c4e458c97dcfae2dc569064e 332 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 243 1.2E-14 T 23-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 LT40_RS01440 b55ea287c4e458c97dcfae2dc569064e 332 Gene3D G3DSA:3.40.630.10 35 234 4.3E-7 T 23-04-2016 LT40_RS20250 02a41202b086f1b2d6e3cb5c658b748f 834 Pfam PF11647 C-terminal region of Pasteurella multocida toxin residues 569-1285 602 650 6.7E-11 T 23-04-2016 IPR020972 Dermonecrotic/RTX toxin C-terminal LT40_RS20250 02a41202b086f1b2d6e3cb5c658b748f 834 SUPERFAMILY SSF159501 571 793 5.75E-47 T 23-04-2016 LT40_RS05015 c9bef30cc325e0cee149cb85d88aed99 367 PIRSF PIRSF028704 1 367 6.5E-123 T 23-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC LT40_RS05015 c9bef30cc325e0cee149cb85d88aed99 367 PANTHER PTHR38592 4 364 1.5E-78 T 23-04-2016 LT40_RS05015 c9bef30cc325e0cee149cb85d88aed99 367 Pfam PF10129 OpgC protein 5 363 1.2E-112 T 23-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC LT40_RS04830 199fb9628aba5b0a2fc073c06673f78c 170 PANTHER PTHR40547 1 170 1.1E-49 T 23-04-2016 LT40_RS04830 199fb9628aba5b0a2fc073c06673f78c 170 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 164 2.0E-52 T 23-04-2016 IPR018639 Domain of unknown function DUF2062 LT40_RS04830 199fb9628aba5b0a2fc073c06673f78c 170 PANTHER PTHR40547:SF1 1 170 1.1E-49 T 23-04-2016 LT40_RS09310 1c73714410c2f9775df74094b509e3ce 398 Gene3D G3DSA:2.60.40.420 42 133 1.3E-4 T 23-04-2016 IPR008972 Cupredoxin LT40_RS09310 1c73714410c2f9775df74094b509e3ce 398 PANTHER PTHR39192 7 395 1.9E-79 T 23-04-2016 LT40_RS09310 1c73714410c2f9775df74094b509e3ce 398 Pfam PF13473 Cupredoxin-like domain 35 131 9.5E-18 T 23-04-2016 IPR028096 EfeO-type cupredoxin-like domain LT40_RS09310 1c73714410c2f9775df74094b509e3ce 398 Pfam PF09375 Imelysin 156 385 1.7E-32 T 23-04-2016 LT40_RS03830 cb671a21459910c06300b2f106ef464e 155 PANTHER PTHR33371 1 146 1.2E-38 T 23-04-2016 LT40_RS03830 cb671a21459910c06300b2f106ef464e 155 Pfam PF02470 MlaD protein 39 116 5.3E-24 T 23-04-2016 IPR003399 Mce/MlaD LT40_RS03830 cb671a21459910c06300b2f106ef464e 155 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 147 1.5E-54 T 23-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 LT40_RS08720 0e670f995eeec8887b6df54047ae5489 433 Pfam PF04860 Phage portal protein 59 388 6.8E-85 T 23-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein LT40_RS08720 0e670f995eeec8887b6df54047ae5489 433 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 50 394 8.3E-99 T 23-04-2016 IPR006427 Phage portal protein, HK97 LT40_RS17750 6745d4e26e3751881c6a2b3e7ebed65c 660 Gene3D G3DSA:2.130.10.30 131 214 1.2E-15 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II LT40_RS17750 6745d4e26e3751881c6a2b3e7ebed65c 660 Gene3D G3DSA:2.130.10.30 252 431 1.2E-15 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II LT40_RS17750 6745d4e26e3751881c6a2b3e7ebed65c 660 SUPERFAMILY SSF50985 146 442 9.94E-17 T 23-04-2016 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II LT40_RS20135 4f9bdb86265cd97404a246a813539245 524 Pfam PF03929 PepSY-associated TM region 10 364 6.2E-59 T 23-04-2016 IPR005625 PepSY-associated TM protein LT40_RS20135 4f9bdb86265cd97404a246a813539245 524 PANTHER PTHR34219 1 507 1.5E-171 T 23-04-2016 LT40_RS20135 4f9bdb86265cd97404a246a813539245 524 PANTHER PTHR34219:SF4 1 507 1.5E-171 T 23-04-2016 LT40_RS16750 ba682d7b5c462527518ab92d1e1883d8 82 Pfam PF06146 Phosphate-starvation-inducible E 8 72 3.0E-16 T 23-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like LT40_RS16750 ba682d7b5c462527518ab92d1e1883d8 82 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 3 77 1.9E-40 T 23-04-2016 IPR013468 Conserved hypothetical protein CHP02647 LT40_RS01700 ef6379723ed5663484c9b82b6b4ad1d6 380 PIRSF PIRSF015557 1 380 4.1E-160 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 LT40_RS01700 ef6379723ed5663484c9b82b6b4ad1d6 380 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 5 376 1.3E-156 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 LT40_RS01700 ef6379723ed5663484c9b82b6b4ad1d6 380 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 5 376 1.5E-151 T 23-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 LT40_RS15100 54be954e78a285fea4827bfd3cb4cbc8 214 Pfam PF01810 LysE type translocator 17 211 4.6E-37 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS15100 54be954e78a285fea4827bfd3cb4cbc8 214 PANTHER PTHR30086:SF2 2 211 4.0E-54 T 23-04-2016 LT40_RS15100 54be954e78a285fea4827bfd3cb4cbc8 214 PANTHER PTHR30086 2 211 4.0E-54 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS15100 54be954e78a285fea4827bfd3cb4cbc8 214 PIRSF PIRSF006324 1 214 2.2E-61 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS15475 761d7b7915a19fba70c107493343870a 150 Pfam PF13463 Winged helix DNA-binding domain 42 101 4.0E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS15475 761d7b7915a19fba70c107493343870a 150 Gene3D G3DSA:1.10.10.10 4 141 2.0E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS15475 761d7b7915a19fba70c107493343870a 150 PANTHER PTHR33164 1 149 5.7E-22 T 23-04-2016 LT40_RS15475 761d7b7915a19fba70c107493343870a 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 2.4E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS15475 761d7b7915a19fba70c107493343870a 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 2.4E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS15475 761d7b7915a19fba70c107493343870a 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 2.4E-9 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS15475 761d7b7915a19fba70c107493343870a 150 SMART SM00347 27 128 3.2E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LT40_RS15475 761d7b7915a19fba70c107493343870a 150 SUPERFAMILY SSF46785 4 141 3.23E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS13855 0f664cb465d1315e7d82f22712dabb14 300 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 12 295 3.2E-50 T 23-04-2016 IPR025859 P-aminobenzoate N-oxygenase AurF LT40_RS20170 e864ec325545896a5749b31bbf94cde2 721 Pfam PF04632 Fusaric acid resistance protein family 24 708 2.1E-214 T 23-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 LT40_RS20170 e864ec325545896a5749b31bbf94cde2 721 PANTHER PTHR30509 7 261 0.0 T 23-04-2016 LT40_RS20170 e864ec325545896a5749b31bbf94cde2 721 PANTHER PTHR30509 334 674 0.0 T 23-04-2016 LT40_RS20170 e864ec325545896a5749b31bbf94cde2 721 PANTHER PTHR30509:SF6 7 261 0.0 T 23-04-2016 LT40_RS20170 e864ec325545896a5749b31bbf94cde2 721 PANTHER PTHR30509:SF6 334 674 0.0 T 23-04-2016 LT40_RS07610 4573d55a85dc04c67873e17bf7e95ca2 664 Gene3D G3DSA:3.40.50.410 230 429 2.6E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS07610 4573d55a85dc04c67873e17bf7e95ca2 664 SUPERFAMILY SSF53300 239 430 1.4E-14 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS07610 4573d55a85dc04c67873e17bf7e95ca2 664 Pfam PF00092 von Willebrand factor type A domain 240 420 5.9E-5 T 23-04-2016 IPR002035 von Willebrand factor, type A LT40_RS10110 5d9de8cd55e7997780445a1698dfd576 120 SUPERFAMILY SSF52091 1 113 3.34E-15 T 23-04-2016 IPR002645 STAS domain LT40_RS10110 5d9de8cd55e7997780445a1698dfd576 120 Gene3D G3DSA:3.30.750.24 7 96 5.2E-9 T 23-04-2016 IPR002645 STAS domain LT40_RS10110 5d9de8cd55e7997780445a1698dfd576 120 PANTHER PTHR33745 1 118 4.6E-43 T 23-04-2016 LT40_RS19035 df64ebb0d2688dad32aa8211c6e8adbb 263 Gene3D G3DSA:2.40.230.20 19 263 4.1E-84 T 23-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 LT40_RS19035 df64ebb0d2688dad32aa8211c6e8adbb 263 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 52 263 9.1E-18 T 23-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 LT40_RS19035 df64ebb0d2688dad32aa8211c6e8adbb 263 SUPERFAMILY SSF111364 27 263 5.1E-73 T 23-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 LT40_RS05425 4bc351542e8d9f30312c037a1db0f4a7 427 Pfam PF16930 Putative porin 110 293 1.6E-38 T 23-04-2016 IPR032638 Putative bacterial porin LT40_RS05425 4bc351542e8d9f30312c037a1db0f4a7 427 Pfam PF16930 Putative porin 352 427 2.9E-8 T 23-04-2016 IPR032638 Putative bacterial porin LT40_RS05425 4bc351542e8d9f30312c037a1db0f4a7 427 SUPERFAMILY SSF56935 331 421 1.1E-6 T 23-04-2016 LT40_RS05425 4bc351542e8d9f30312c037a1db0f4a7 427 SUPERFAMILY SSF56935 84 285 1.1E-6 T 23-04-2016 LT40_RS09115 c7f13929aba0d67faddc8ac4973a3143 433 Gene3D G3DSA:3.50.50.60 1 104 2.0E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09115 c7f13929aba0d67faddc8ac4973a3143 433 Gene3D G3DSA:3.50.50.60 192 282 2.0E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09115 c7f13929aba0d67faddc8ac4973a3143 433 Pfam PF01593 Flavin containing amine oxidoreductase 13 382 3.4E-25 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 LT40_RS09115 c7f13929aba0d67faddc8ac4973a3143 433 SUPERFAMILY SSF51905 4 296 5.83E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09115 c7f13929aba0d67faddc8ac4973a3143 433 SUPERFAMILY SSF51905 399 431 5.83E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LT40_RS09115 c7f13929aba0d67faddc8ac4973a3143 433 PANTHER PTHR10742 6 433 3.9E-62 T 23-04-2016 LT40_RS09115 c7f13929aba0d67faddc8ac4973a3143 433 PANTHER PTHR10742:SF266 6 433 3.9E-62 T 23-04-2016 LT40_RS09115 c7f13929aba0d67faddc8ac4973a3143 433 PRINTS PR00757 Flavin-containing amine oxidase signature 392 414 4.3E-7 T 23-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 LT40_RS09115 c7f13929aba0d67faddc8ac4973a3143 433 PRINTS PR00757 Flavin-containing amine oxidase signature 5 24 4.3E-7 T 23-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 LT40_RS09115 c7f13929aba0d67faddc8ac4973a3143 433 PRINTS PR00757 Flavin-containing amine oxidase signature 185 207 4.3E-7 T 23-04-2016 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 LT40_RS11930 3fbf3ad9019e0c2dafc6c964da4aebc3 141 SUPERFAMILY SSF48150 24 136 1.48E-7 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS11930 3fbf3ad9019e0c2dafc6c964da4aebc3 141 Gene3D G3DSA:1.10.340.30 25 133 1.4E-5 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 LT40_RS01050 a5c4e4e0bebbc0f1fbad5950415e31a3 86 Pfam PF10976 Protein of unknown function (DUF2790) 9 84 7.1E-25 T 23-04-2016 IPR021245 Protein of unknown function DUF2790 LT40_RS08905 d6d0acd81ea3d5e4154790fa88ba93f1 85 Pfam PF07865 Protein of unknown function (DUF1652) 5 71 2.8E-24 T 23-04-2016 IPR012448 Protein of unknown function DUF1652 LT40_RS04470 2c4724b98b2b389a21a2f14380dabac9 193 Pfam PF13207 AAA domain 7 122 1.3E-6 T 23-04-2016 LT40_RS04470 2c4724b98b2b389a21a2f14380dabac9 193 SUPERFAMILY SSF52540 1 155 5.15E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS04470 2c4724b98b2b389a21a2f14380dabac9 193 Gene3D G3DSA:3.40.50.300 1 129 2.7E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS11130 5ce383fda0b8f907304e032e59f3d408 472 Pfam PF02667 Short chain fatty acid transporter 12 455 1.6E-82 T 23-04-2016 IPR006160 Short chain fatty acid transporter AtoE LT40_RS11130 5ce383fda0b8f907304e032e59f3d408 472 PANTHER PTHR41983 5 460 0.0 T 23-04-2016 LT40_RS11130 5ce383fda0b8f907304e032e59f3d408 472 PANTHER PTHR41983:SF1 5 460 0.0 T 23-04-2016 LT40_RS09015 4435440774ad9e9209744204992605d8 254 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 125 243 1.9E-18 T 23-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LT40_RS07865 f2d40ce49792dd8a5a11c969a120ba9d 148 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 12 144 3.6E-16 T 23-04-2016 IPR009936 Protein of unknown function DUF1468 LT40_RS07285 d7cfb9bc06a761bc606928e961d52f72 83 Gene3D G3DSA:2.30.30.320 2 70 3.3E-31 T 23-04-2016 IPR023387 DUF1653-like domain LT40_RS07285 d7cfb9bc06a761bc606928e961d52f72 83 Pfam PF07866 Protein of unknown function (DUF1653) 7 66 4.9E-28 T 23-04-2016 IPR023387 DUF1653-like domain LT40_RS16875 eb7dc9d885a235d6744c867841b6cc1c 654 PANTHER PTHR23028 2 552 1.2E-106 T 23-04-2016 LT40_RS16875 eb7dc9d885a235d6744c867841b6cc1c 654 Pfam PF01757 Acyltransferase family 8 322 2.3E-29 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LT40_RS16875 eb7dc9d885a235d6744c867841b6cc1c 654 PANTHER PTHR23028:SF53 2 552 1.2E-106 T 23-04-2016 LT40_RS09550 e8b098fffe0e502f3436c0d3d1bdcc81 106 Pfam PF05957 Bacterial protein of unknown function (DUF883) 18 105 3.3E-19 T 23-04-2016 IPR010279 Protein of unknown function DUF883, ElaB LT40_RS09550 e8b098fffe0e502f3436c0d3d1bdcc81 106 PANTHER PTHR35893:SF3 7 106 3.0E-25 T 23-04-2016 LT40_RS09550 e8b098fffe0e502f3436c0d3d1bdcc81 106 PANTHER PTHR35893 7 106 3.0E-25 T 23-04-2016 LT40_RS08750 74f42ad2e85a738247aeb6432ad591a7 128 Pfam PF11367 Protein of unknown function (DUF3168) 15 121 7.5E-16 T 23-04-2016 IPR021508 Protein of unknown function DUF3168 LT40_RS07200 019b3d9680b98cbff446eac197c19b97 104 PANTHER PTHR35893:SF3 1 104 2.4E-32 T 23-04-2016 LT40_RS07200 019b3d9680b98cbff446eac197c19b97 104 PANTHER PTHR35893 1 104 2.4E-32 T 23-04-2016 LT40_RS07200 019b3d9680b98cbff446eac197c19b97 104 Pfam PF05957 Bacterial protein of unknown function (DUF883) 13 103 1.9E-30 T 23-04-2016 IPR010279 Protein of unknown function DUF883, ElaB LT40_RS20140 3fd64e66ffb5822927df4b96f8bac1ab 108 Pfam PF11804 Protein of unknown function (DUF3325) 3 101 4.4E-33 T 23-04-2016 IPR021762 Protein of unknown function DUF3325 LT40_RS14970 89979ac51ac1566d5621966e9272bfa1 91 Gene3D G3DSA:1.10.150.130 35 81 9.2E-5 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal LT40_RS19685 b6b98ad45e09515c1ed79c37abec165c 740 Pfam PF07793 Protein of unknown function (DUF1631) 23 734 1.2E-249 T 23-04-2016 IPR012434 Protein of unknown function DUF1631 LT40_RS17465 3a3bfae3d3fd80a735e88ec2620678a6 150 Gene3D G3DSA:3.10.129.10 2 132 2.5E-42 T 23-04-2016 IPR029069 HotDog domain LT40_RS17465 3a3bfae3d3fd80a735e88ec2620678a6 150 PANTHER PTHR31793:SF2 1 141 2.5E-54 T 23-04-2016 LT40_RS17465 3a3bfae3d3fd80a735e88ec2620678a6 150 Pfam PF13279 Thioesterase-like superfamily 8 113 2.8E-14 T 23-04-2016 LT40_RS17465 3a3bfae3d3fd80a735e88ec2620678a6 150 PANTHER PTHR31793 1 141 2.5E-54 T 23-04-2016 LT40_RS17465 3a3bfae3d3fd80a735e88ec2620678a6 150 SUPERFAMILY SSF54637 1 149 1.62E-37 T 23-04-2016 IPR029069 HotDog domain LT40_RS20130 7bd4f00cbe48f3c29e4c84f3b3dfe233 101 Pfam PF12365 Protein of unknown function (DUF3649) 68 93 1.4E-5 T 23-04-2016 IPR022109 Protein of unknown function DUF3649 LT40_RS08730 249c84b13cfe9136d4a7f8ec6713fab7 395 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 18 387 6.9E-58 T 23-04-2016 IPR006444 Phage major capsid protein, HK97 LT40_RS08730 249c84b13cfe9136d4a7f8ec6713fab7 395 Pfam PF05065 Phage capsid family 119 387 1.4E-55 T 23-04-2016 IPR024455 Phage capsid LT40_RS08730 249c84b13cfe9136d4a7f8ec6713fab7 395 SUPERFAMILY SSF56563 114 391 1.19E-79 T 23-04-2016 LT40_RS11260 a9b1a0196278c8530888ebc55c5dc8f1 124 PANTHER PTHR28259 4 124 8.3E-32 T 23-04-2016 LT40_RS11260 a9b1a0196278c8530888ebc55c5dc8f1 124 TIGRFAM TIGR00494 crcB: protein CrcB 7 121 2.0E-23 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LT40_RS11260 a9b1a0196278c8530888ebc55c5dc8f1 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 118 2.7E-24 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LT40_RS11260 a9b1a0196278c8530888ebc55c5dc8f1 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 123 18.353 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LT40_RS19930 9643d77094b93d4c8fb2ae273014bac5 197 Pfam PF03923 Uncharacterized lipoprotein 31 192 5.8E-14 T 23-04-2016 IPR005619 Uncharacterised protein family, YajG LT40_RS01885 172c134b59b667f0a44f3d85990f9b90 511 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 184 2.2E-46 T 23-04-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices LT40_RS01885 172c134b59b667f0a44f3d85990f9b90 511 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 196 505 4.0E-117 T 23-04-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase LT40_RS16350 dc7a5199b2fa35a9e77a8ac0a39a1fac 429 Pfam PF07690 Major Facilitator Superfamily 68 387 5.1E-21 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LT40_RS16350 dc7a5199b2fa35a9e77a8ac0a39a1fac 429 PANTHER PTHR23508:SF5 13 424 2.0E-246 T 23-04-2016 LT40_RS16350 dc7a5199b2fa35a9e77a8ac0a39a1fac 429 PANTHER PTHR23508 13 424 2.0E-246 T 23-04-2016 LT40_RS16350 dc7a5199b2fa35a9e77a8ac0a39a1fac 429 SUPERFAMILY SSF103473 10 427 1.44E-56 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS16350 dc7a5199b2fa35a9e77a8ac0a39a1fac 429 Gene3D G3DSA:1.20.1250.20 22 229 2.5E-19 T 23-04-2016 LT40_RS16350 dc7a5199b2fa35a9e77a8ac0a39a1fac 429 Gene3D G3DSA:1.20.1250.20 249 426 3.1E-13 T 23-04-2016 LT40_RS12670 ea9f7b9c121324b8ffe7f44b91369e35 357 Pfam PF01594 Domain of unknown function DUF20 14 336 1.1E-52 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like LT40_RS12670 ea9f7b9c121324b8ffe7f44b91369e35 357 PANTHER PTHR21716:SF13 1 356 8.9E-89 T 23-04-2016 LT40_RS12670 ea9f7b9c121324b8ffe7f44b91369e35 357 PANTHER PTHR21716 1 356 8.9E-89 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like LT40_RS07490 ef73c219dc4b7e95100cf6e0041ce6d5 105 PANTHER PTHR39600 24 105 6.6E-16 T 23-04-2016 LT40_RS07490 ef73c219dc4b7e95100cf6e0041ce6d5 105 Pfam PF11720 Peptidase inhibitor I78 family 41 105 1.6E-14 T 23-04-2016 IPR021719 Proteinase inhibitor I78 LT40_RS17010 5f81263efe3d4bc029edadec3d7c63ee 262 PANTHER PTHR30151 1 262 6.0E-186 T 23-04-2016 LT40_RS17010 5f81263efe3d4bc029edadec3d7c63ee 262 PANTHER PTHR30151:SF22 1 262 6.0E-186 T 23-04-2016 LT40_RS17010 5f81263efe3d4bc029edadec3d7c63ee 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 245 1.2E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17010 5f81263efe3d4bc029edadec3d7c63ee 262 SUPERFAMILY SSF161098 55 236 6.67E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS17010 5f81263efe3d4bc029edadec3d7c63ee 262 Gene3D G3DSA:1.10.3720.10 51 248 1.9E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS06195 49590414af6584a88de74fcc08ca997c 290 Pfam PF10001 Uncharacterized protein conserved in bacteria (DUF2242) 57 177 3.7E-53 T 23-04-2016 IPR018718 Protein of unknown function DUF2242 LT40_RS15005 a2780cd8ba0376b81cb347f3436d6cd4 369 Gene3D G3DSA:1.10.10.10 5 38 1.6E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain LT40_RS10120 d0d3cde75bc65e3da36fce2d51213e14 134 Pfam PF03692 Putative zinc- or iron-chelating domain 6 98 3.7E-9 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein LT40_RS03035 3cc9d8a6ae70af881a32b0050e4c81e3 831 Pfam PF16967 Fimbrial, FimD or usher-like 268 335 6.3E-24 T 23-04-2016 IPR032636 Pilus assembly protein domain LT40_RS03035 3cc9d8a6ae70af881a32b0050e4c81e3 831 Pfam PF15976 CS1-pili formation C-terminal 720 815 5.7E-22 T 23-04-2016 IPR031917 Pilus assembly protein, C-terminal domain LT40_RS20725 d10648c26df4686eee2d700b25196d4c 239 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 55 230 2.0E-14 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 LT40_RS20725 d10648c26df4686eee2d700b25196d4c 239 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 16 238 4.2E-52 T 23-04-2016 IPR010239 Conserved hypothetical protein CHP02001 LT40_RS07640 dcdb7ca86b19f66bafe983981b84eb00 206 Pfam PF08856 Protein of unknown function (DUF1826) 11 203 3.5E-61 T 23-04-2016 IPR014955 Protein of unknown function DUF1826 LT40_RS11245 4ba128d313030673067f7b735e6ee441 100 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 28 97 8.0E-8 T 23-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB LT40_RS11245 4ba128d313030673067f7b735e6ee441 100 Pfam PF11776 Nickel/cobalt transporter regulator 44 94 9.9E-11 T 23-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB LT40_RS04280 dad923179200f3522d670d1e8ef1fc7a 385 SUPERFAMILY SSF56024 4 182 3.66E-42 T 23-04-2016 LT40_RS04280 dad923179200f3522d670d1e8ef1fc7a 385 Pfam PF13091 PLD-like domain 28 169 3.4E-15 T 23-04-2016 IPR025202 Phospholipase D-like domain LT40_RS04280 dad923179200f3522d670d1e8ef1fc7a 385 Pfam PF13091 PLD-like domain 217 343 1.2E-25 T 23-04-2016 IPR025202 Phospholipase D-like domain LT40_RS04280 dad923179200f3522d670d1e8ef1fc7a 385 SUPERFAMILY SSF56024 188 363 1.95E-36 T 23-04-2016 LT40_RS04280 dad923179200f3522d670d1e8ef1fc7a 385 PANTHER PTHR21248 5 384 6.5E-95 T 23-04-2016 LT40_RS04280 dad923179200f3522d670d1e8ef1fc7a 385 Gene3D G3DSA:3.30.870.10 6 174 1.9E-39 T 23-04-2016 LT40_RS04280 dad923179200f3522d670d1e8ef1fc7a 385 Gene3D G3DSA:3.30.870.10 210 353 7.8E-32 T 23-04-2016 LT40_RS04280 dad923179200f3522d670d1e8ef1fc7a 385 PANTHER PTHR21248:SF5 5 384 6.5E-95 T 23-04-2016 LT40_RS05995 2a33232986087259867802239155dbbb 165 Pfam PF14316 Domain of unknown function (DUF4381) 5 163 1.7E-42 T 23-04-2016 IPR025489 Protein of unknown function (DUF4381 LT40_RS00745 bd53b8731d811735e8c0a5a4b01bbadb 118 Pfam PF07238 PilZ domain 16 106 2.1E-12 T 23-04-2016 IPR009875 PilZ domain GO:0035438 LT40_RS02270 b307072f181b80bb35856166b7e8f894 155 SUPERFAMILY SSF140566 1 128 8.63E-24 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 LT40_RS02270 b307072f181b80bb35856166b7e8f894 155 Gene3D G3DSA:1.20.58.300 1 127 1.9E-28 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 LT40_RS02270 b307072f181b80bb35856166b7e8f894 155 Pfam PF05130 FlgN protein 1 144 1.9E-25 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 LT40_RS04760 54806b0fe51a61c3b1d5f78d86d50464 120 Pfam PF07238 PilZ domain 5 98 5.7E-8 T 23-04-2016 IPR009875 PilZ domain GO:0035438 LT40_RS01480 190e42e745abc6f94cf3deeec3ed84d9 84 Pfam PF11275 Protein of unknown function (DUF3077) 9 80 3.2E-9 T 23-04-2016 IPR021427 Protein of unknown function DUF3077 LT40_RS01575 583a36c5b8e4547e4852d8de66589930 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 89 6.9E-11 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family LT40_RS19780 dfabf004c59397d6f5c795f7c925f496 76 PANTHER PTHR37550 1 76 3.2E-34 T 23-04-2016 LT40_RS19780 dfabf004c59397d6f5c795f7c925f496 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 53 1.0E-5 T 23-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 LT40_RS19780 dfabf004c59397d6f5c795f7c925f496 76 PANTHER PTHR37550:SF2 1 76 3.2E-34 T 23-04-2016 LT40_RS17705 d294ada14749974195c5e09b3c646aa5 1027 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 824 860 7.4E-7 T 23-04-2016 IPR007577 Glycosyltransferase, DXD sugar-binding motif LT40_RS17705 d294ada14749974195c5e09b3c646aa5 1027 SUPERFAMILY SSF53448 730 1019 6.56E-36 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases LT40_RS17500 eb41cf3993273f9b6c58661ffce4d94f 133 Pfam PF07007 Protein of unknown function (DUF1311) 26 125 2.0E-11 T 23-04-2016 IPR009739 Protein of unknown function DUF1311 LT40_RS01020 98c4d59c550fc84335cd121c754b39bf 64 Pfam PF06945 Protein of unknown function (DUF1289) 5 49 1.9E-15 T 23-04-2016 IPR010710 Protein of unknown function DUF1289 LT40_RS08080 b8d9f81e8d079f739cb1de766189f0ba 555 PANTHER PTHR30443 1 537 4.6E-245 T 23-04-2016 LT40_RS08080 b8d9f81e8d079f739cb1de766189f0ba 555 PANTHER PTHR30443:SF0 1 537 4.6E-245 T 23-04-2016 LT40_RS08080 b8d9f81e8d079f739cb1de766189f0ba 555 SUPERFAMILY SSF53649 234 525 3.27E-27 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LT40_RS08080 b8d9f81e8d079f739cb1de766189f0ba 555 Pfam PF08019 Domain of unknown function (DUF1705) 53 203 8.8E-47 T 23-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 LT40_RS08080 b8d9f81e8d079f739cb1de766189f0ba 555 Pfam PF00884 Sulfatase 233 521 9.7E-55 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LT40_RS08080 b8d9f81e8d079f739cb1de766189f0ba 555 Gene3D G3DSA:3.40.720.10 234 525 4.2E-20 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LT40_RS00885 afd868291b71ec2f0dd3b3f825f986b5 101 Pfam PF10052 Protein of unknown function (DUF2288) 8 97 1.6E-31 T 23-04-2016 IPR018741 Protein of unknown function DUF2288 LT40_RS04900 0f8be67d1c8f626e320c96aad99d5c42 423 Pfam PF03573 outer membrane porin, OprD family 30 422 5.5E-134 T 23-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 LT40_RS04900 0f8be67d1c8f626e320c96aad99d5c42 423 Gene3D G3DSA:2.40.160.10 35 423 1.6E-140 T 23-04-2016 IPR023614 Porin domain LT40_RS04900 0f8be67d1c8f626e320c96aad99d5c42 423 PANTHER PTHR34596 1 423 7.6E-132 T 23-04-2016 LT40_RS07645 361cfc9b676d0d87120910d5d15bcd12 240 Pfam PF10670 Domain of unknown function (DUF4198) 32 212 1.0E-17 T 23-04-2016 IPR019613 Protein of unknown function DUF4198 LT40_RS04715 bab0241d6ea172fb00d06bc51dd54605 1176 Pfam PF03538 Salmonella virulence plasmid 28.1kDa A protein 47 292 1.8E-54 T 23-04-2016 IPR018003 Insecticidal toxin complex/plasmid virulence protein LT40_RS19370 24ca86ab450b5b52967a509924258799 162 Pfam PF11220 Protein of unknown function (DUF3015) 19 158 3.2E-55 T 23-04-2016 IPR021383 Protein of unknown function DUF3015 LT40_RS01720 cee8af9db505c05ad6adaff2ccf642d3 329 SUPERFAMILY SSF56529 116 314 5.13E-24 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS01720 cee8af9db505c05ad6adaff2ccf642d3 329 Gene3D G3DSA:3.90.850.10 131 314 4.6E-5 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 LT40_RS01720 cee8af9db505c05ad6adaff2ccf642d3 329 PIRSF PIRSF033905 1 327 1.6E-165 T 23-04-2016 IPR009645 Uncharacterised conserved protein GguC LT40_RS19325 00d61826251f299a0444086260c6bd02 122 Gene3D G3DSA:2.40.10.220 2 121 3.7E-46 T 23-04-2016 LT40_RS19325 00d61826251f299a0444086260c6bd02 122 Pfam PF07238 PilZ domain 7 103 4.2E-11 T 23-04-2016 IPR009875 PilZ domain GO:0035438 LT40_RS19325 00d61826251f299a0444086260c6bd02 122 PIRSF PIRSF028141 4 122 2.2E-40 T 23-04-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type LT40_RS19325 00d61826251f299a0444086260c6bd02 122 SUPERFAMILY SSF141371 1 121 3.69E-34 T 23-04-2016 LT40_RS10240 a1f6cefd91fd1638ef33f0260cdbccac 73 Pfam PF13396 Phospholipase_D-nuclease N-terminal 16 57 3.3E-9 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal LT40_RS19280 8657739699a75f662747d991634d4c61 210 Gene3D G3DSA:3.90.70.10 86 175 1.0E-10 T 23-04-2016 LT40_RS19280 8657739699a75f662747d991634d4c61 210 Pfam PF03412 Peptidase C39 family 37 173 1.3E-19 T 23-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 LT40_RS20505 9faf4a3761f88409ad4c8c99af1b103a 137 Pfam PF14346 Domain of unknown function (DUF4398) 32 129 9.0E-28 T 23-04-2016 IPR025511 Domain of unknown function DUF4398 LT40_RS05030 2fbe2d70bb63b3b2a1eb22c637d9c477 403 Gene3D G3DSA:3.90.1150.10 279 402 2.0E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LT40_RS05030 2fbe2d70bb63b3b2a1eb22c637d9c477 403 PANTHER PTHR11751 8 403 8.1E-191 T 23-04-2016 LT40_RS05030 2fbe2d70bb63b3b2a1eb22c637d9c477 403 SUPERFAMILY SSF53383 6 401 1.1E-94 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase LT40_RS05030 2fbe2d70bb63b3b2a1eb22c637d9c477 403 Pfam PF00155 Aminotransferase class I and II 35 391 3.9E-47 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LT40_RS05030 2fbe2d70bb63b3b2a1eb22c637d9c477 403 Gene3D G3DSA:3.40.640.10 51 278 4.8E-65 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LT40_RS05030 2fbe2d70bb63b3b2a1eb22c637d9c477 403 PANTHER PTHR11751:SF303 8 403 8.1E-191 T 23-04-2016 LT40_RS12165 90eea7da6dfe766de6ff6496a305866e 178 Pfam PF11937 Protein of unknown function (DUF3455) 37 176 3.9E-30 T 23-04-2016 IPR021851 Protein of unknown function DUF3455 LT40_RS09345 0ce47caf8253dbef398b5d6b13d4d2a9 1756 Gene3D G3DSA:1.20.58.360 1488 1650 1.9E-16 T 23-04-2016 LT40_RS09345 0ce47caf8253dbef398b5d6b13d4d2a9 1756 SUPERFAMILY SSF52058 1089 1366 4.59E-25 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LT40_RS09345 0ce47caf8253dbef398b5d6b13d4d2a9 1756 Pfam PF14496 C-terminal novel E3 ligase, LRR-interacting 1421 1655 6.8E-27 T 23-04-2016 IPR029487 Novel E3 ligase domain GO:0004842|GO:0016567 KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- LT40_RS09345 0ce47caf8253dbef398b5d6b13d4d2a9 1756 Gene3D G3DSA:3.80.10.10 1089 1365 2.4E-29 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like LT40_RS03755 1265e8c0a593d52a7615f8e66e76cfbd 150 Gene3D G3DSA:1.25.40.10 5 75 1.1E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS03755 1265e8c0a593d52a7615f8e66e76cfbd 150 SUPERFAMILY SSF48452 9 76 1.57E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS10330 45a18238c3fd8deafe47548863d8bde7 283 Pfam PF05425 Copper resistance protein D 179 274 2.0E-13 T 23-04-2016 IPR008457 Copper resistance protein D GO:0016021 LT40_RS10330 45a18238c3fd8deafe47548863d8bde7 283 PANTHER PTHR34820 1 279 6.5E-27 T 23-04-2016 LT40_RS20645 9e0823bac7bdbea66bf72856264149fb 179 Pfam PF11157 Protein of unknown function (DUF2937) 2 159 3.2E-62 T 23-04-2016 IPR022584 Protein of unknown function DUF2937 LT40_RS20645 9e0823bac7bdbea66bf72856264149fb 179 PIRSF PIRSF029393 1 171 1.3E-72 T 23-04-2016 IPR016917 Uncharacterised conserved protein UCP029393 LT40_RS08745 e791e1e9b393b075f9ff371bb6b71d39 166 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 13 91 8.3E-5 T 23-04-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component LT40_RS15270 7681fe4e86ad90732c2e8a0b9c5361a2 148 Pfam PF10027 Predicted integral membrane protein (DUF2269) 6 147 1.1E-24 T 23-04-2016 IPR018729 Protein of unknown function DUF2269, transmembrane LT40_RS00960 3e817721288fc26ee45adb529a019a18 829 Gene3D G3DSA:1.25.40.10 782 810 3.3E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS00960 3e817721288fc26ee45adb529a019a18 829 Gene3D G3DSA:1.25.40.10 555 645 3.3E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS00960 3e817721288fc26ee45adb529a019a18 829 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 784 827 7.5E-20 T 23-04-2016 IPR020011 Motility protein FimV, C-terminal LT40_RS00960 3e817721288fc26ee45adb529a019a18 829 SUPERFAMILY SSF48452 782 812 8.99E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS00960 3e817721288fc26ee45adb529a019a18 829 SUPERFAMILY SSF48452 553 645 8.99E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS00960 3e817721288fc26ee45adb529a019a18 829 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 168 239 3.2E-26 T 23-04-2016 IPR020012 Motility protein FimV, N-terminal LT40_RS00785 85499a47002f85638f278935173eaa53 180 PANTHER PTHR34980:SF2 1 179 9.6E-36 T 23-04-2016 LT40_RS00785 85499a47002f85638f278935173eaa53 180 PANTHER PTHR34980 1 179 9.6E-36 T 23-04-2016 LT40_RS01620 b2eac083f919e78a589338b01b87734d 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 307 1.4E-29 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS01620 b2eac083f919e78a589338b01b87734d 343 PANTHER PTHR30482 1 317 1.1E-48 T 23-04-2016 LT40_RS17765 47bf222e29900bb77ba920415e3ae1d0 585 PANTHER PTHR34847 4 583 1.1E-141 T 23-04-2016 LT40_RS17765 47bf222e29900bb77ba920415e3ae1d0 585 SUPERFAMILY SSF53067 255 358 9.32E-13 T 23-04-2016 LT40_RS17765 47bf222e29900bb77ba920415e3ae1d0 585 SUPERFAMILY SSF53067 22 84 9.32E-13 T 23-04-2016 LT40_RS17765 47bf222e29900bb77ba920415e3ae1d0 585 SUPERFAMILY SSF53067 132 218 9.32E-13 T 23-04-2016 LT40_RS17765 47bf222e29900bb77ba920415e3ae1d0 585 Pfam PF02543 Carbamoyltransferase N-terminus 5 354 2.2E-54 T 23-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 LT40_RS17765 47bf222e29900bb77ba920415e3ae1d0 585 Pfam PF16861 Carbamoyltransferase C-terminus 406 575 2.4E-60 T 23-04-2016 IPR031730 Carbamoyltransferase, C-terminal LT40_RS06380 d757514f52d23b3781cbde525f163dcd 389 SUPERFAMILY SSF53756 80 384 5.76E-15 T 23-04-2016 LT40_RS06380 d757514f52d23b3781cbde525f163dcd 389 Pfam PF13692 Glycosyl transferases group 1 236 354 3.9E-10 T 23-04-2016 LT40_RS19050 6ef304dcf935b02296919b4310737156 370 PANTHER PTHR32196:SF30 17 370 2.6E-45 T 23-04-2016 LT40_RS19050 6ef304dcf935b02296919b4310737156 370 PANTHER PTHR32196 17 370 2.6E-45 T 23-04-2016 LT40_RS19050 6ef304dcf935b02296919b4310737156 370 Pfam PF02653 Branched-chain amino acid transport system / permease component 80 351 1.1E-37 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LT40_RS08940 29da74919da56809e7ed71d8b6de7ea6 340 SUPERFAMILY SSF161098 137 323 6.15E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS08940 29da74919da56809e7ed71d8b6de7ea6 340 Gene3D G3DSA:1.10.3720.10 135 338 7.5E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS08940 29da74919da56809e7ed71d8b6de7ea6 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 339 1.1E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LT40_RS08940 29da74919da56809e7ed71d8b6de7ea6 340 PANTHER PTHR30325 1 339 2.9E-186 T 23-04-2016 LT40_RS01685 a762ad7af828b45b0fabc48e8d4e0337 141 Pfam PF07486 Cell Wall Hydrolase 21 137 5.3E-18 T 23-04-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 LT40_RS12690 59b0e9636b57e41ce97eade251d28339 102 Pfam PF03413 Peptidase propeptide and YPEB domain 41 98 6.1E-16 T 23-04-2016 IPR025711 PepSY domain LT40_RS11575 63a19c5009f85bd061a89f2a2d3fc1e2 180 Gene3D G3DSA:3.40.50.970 14 161 7.9E-9 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS11575 63a19c5009f85bd061a89f2a2d3fc1e2 180 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 159 2.9E-11 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LT40_RS11575 63a19c5009f85bd061a89f2a2d3fc1e2 180 SUPERFAMILY SSF52518 14 168 1.57E-14 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold LT40_RS19495 62950c01823b17a658d78fbc8c19e52b 1018 Pfam PF05567 Neisseria PilC beta-propeller domain 528 858 5.5E-56 T 23-04-2016 IPR008707 PilC beta-propeller domain LT40_RS06830 cd8fdb17a262074afdc363031e125995 179 PIRSF PIRSF029505 3 178 1.2E-77 T 23-04-2016 IPR016922 Uncharacterised conserved protein UCP029505 LT40_RS12030 a9fe2da6fb50e41f5a84c14970a0644b 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 4.0E-7 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family LT40_RS12030 a9fe2da6fb50e41f5a84c14970a0644b 94 SUPERFAMILY SSF143011 4 82 1.96E-10 T 23-04-2016 LT40_RS01485 93f3b82df85eaaf1cd0d5244e4c3494d 162 Pfam PF11006 Protein of unknown function (DUF2845) 76 122 5.0E-7 T 23-04-2016 IPR021268 Protein of unknown function DUF2845 LT40_RS10035 8745d8497ccf8f50e9e42429c8d8a8b4 80 Pfam PF07867 Protein of unknown function (DUF1654) 10 79 9.4E-34 T 23-04-2016 IPR012449 Bacteriophage F116, Orf28 LT40_RS16190 9f5740554649b43edf3547ef70285f7b 408 Pfam PF01757 Acyltransferase family 10 390 2.1E-30 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 LT40_RS06290 017d87893cbb0936ddc9662cea74da70 69 Pfam PF11160 Protein of unknown function (DUF2945) 8 68 1.7E-23 T 23-04-2016 IPR021331 Protein of unknown function DUF2945 LT40_RS02655 2d329e423c95c3af9b33bd8bbcfbe0be 131 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 13 127 3.8E-26 T 23-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III LT40_RS20600 7cb7245ca6fafea321cd4f470bbf6fa7 218 Pfam PF06551 Protein of unknown function (DUF1120) 28 104 9.6E-12 T 23-04-2016 IPR010546 Protein of unknown function DUF1120 LT40_RS20400 82a717612ed5205cdc8ee3a9a307d61f 96 Pfam PF12021 Protein of unknown function (DUF3509) 4 88 1.2E-22 T 23-04-2016 IPR021898 Protein of unknown function DUF3509 LT40_RS10675 b733f42c138dfb9c3a1cced7752de166 289 Gene3D G3DSA:3.30.70.900 9 86 6.5E-6 T 23-04-2016 LT40_RS10675 b733f42c138dfb9c3a1cced7752de166 289 SUPERFAMILY SSF54909 7 100 1.13E-7 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel LT40_RS17680 bb7735de2dc3fc7e9307730bd62c2682 373 PANTHER PTHR12526:SF220 79 352 5.1E-100 T 23-04-2016 LT40_RS17680 bb7735de2dc3fc7e9307730bd62c2682 373 PANTHER PTHR12526:SF220 1 55 5.1E-100 T 23-04-2016 LT40_RS17680 bb7735de2dc3fc7e9307730bd62c2682 373 Pfam PF00534 Glycosyl transferases group 1 191 348 2.5E-32 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 LT40_RS17680 bb7735de2dc3fc7e9307730bd62c2682 373 SUPERFAMILY SSF53756 4 358 1.86E-57 T 23-04-2016 LT40_RS17680 bb7735de2dc3fc7e9307730bd62c2682 373 Gene3D G3DSA:3.40.50.2000 155 348 1.9E-20 T 23-04-2016 LT40_RS17680 bb7735de2dc3fc7e9307730bd62c2682 373 PANTHER PTHR12526 79 352 5.1E-100 T 23-04-2016 LT40_RS17680 bb7735de2dc3fc7e9307730bd62c2682 373 PANTHER PTHR12526 1 55 5.1E-100 T 23-04-2016 LT40_RS08415 d3c66d1082d89ce7214faf1ebfacec17 384 Pfam PF10082 Putative beta-barrel porin 2 23 382 7.7E-27 T 23-04-2016 IPR018759 Putative beta-barrel porin 2 LT40_RS08415 d3c66d1082d89ce7214faf1ebfacec17 384 SUPERFAMILY SSF56935 114 309 9.82E-5 T 23-04-2016 LT40_RS08415 d3c66d1082d89ce7214faf1ebfacec17 384 Gene3D G3DSA:2.40.160.10 84 309 2.5E-5 T 23-04-2016 IPR023614 Porin domain LT40_RS17785 3d80dcd711579964dbbf9bdc802a164b 318 Pfam PF13524 Glycosyl transferases group 1 212 293 2.0E-11 T 23-04-2016 LT40_RS17785 3d80dcd711579964dbbf9bdc802a164b 318 SUPERFAMILY SSF53756 48 296 1.13E-8 T 23-04-2016 LT40_RS14750 fece5a89d0275c23683d026ff4593fc5 459 Pfam PF11067 Protein of unknown function (DUF2868) 146 442 2.5E-89 T 23-04-2016 IPR021296 Protein of unknown function DUF2868 LT40_RS11055 b239fd503b5c054b9af5c42d45833e39 118 Pfam PF11154 Protein of unknown function (DUF2934) 4 38 2.3E-12 T 23-04-2016 IPR021327 Protein of unknown function DUF2934 LT40_RS12765 58199df703479bb88d1066c313eac8d3 260 SUPERFAMILY SSF48452 159 256 3.52E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS12765 58199df703479bb88d1066c313eac8d3 260 Gene3D G3DSA:1.25.40.10 162 247 1.3E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS12155 44b9540f4205505cc75995008ea24d52 235 Pfam PF10099 Anti-sigma-K factor rskA 67 228 1.9E-21 T 23-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 LT40_RS18905 1bb1900e0fe67f1882e8cb86ed0e490f 108 PIRSF PIRSF028538 2 108 1.2E-51 T 23-04-2016 IPR014949 Protein of unknown function DUF1820 LT40_RS18905 1bb1900e0fe67f1882e8cb86ed0e490f 108 Pfam PF08850 Domain of unknown function (DUF1820) 8 103 1.7E-43 T 23-04-2016 IPR014949 Protein of unknown function DUF1820 LT40_RS17065 53882fa6ab041c761c73da62a57eb56a 250 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 71 120 7.0E-8 T 23-04-2016 IPR018637 Domain of unknown function DUF2059 LT40_RS02570 7057bc92c7183de0edb4cd2c58424d1a 521 Pfam PF02120 Flagellar hook-length control protein FliK 427 507 2.4E-19 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal LT40_RS01525 a3f836f85c4b2e5f90215c13c30d447f 74 SUPERFAMILY SSF50182 22 72 1.96E-13 T 23-04-2016 IPR010920 LSM domain LT40_RS01525 a3f836f85c4b2e5f90215c13c30d447f 74 PANTHER PTHR37011 2 74 5.9E-15 T 23-04-2016 LT40_RS01525 a3f836f85c4b2e5f90215c13c30d447f 74 Gene3D G3DSA:2.30.30.100 21 73 6.3E-17 T 23-04-2016 LT40_RS01525 a3f836f85c4b2e5f90215c13c30d447f 74 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 72 1.5E-15 T 23-04-2016 IPR010305 Protein of unknown function DUF903 LT40_RS08400 57bfdfafc098103706f3aee78367d716 453 SMART SM01236 134 231 3.2E-25 T 23-04-2016 LT40_RS08400 57bfdfafc098103706f3aee78367d716 453 Pfam PF14518 Iron-containing redox enzyme 103 252 2.5E-32 T 23-04-2016 IPR028201 PqqC-like protein LT40_RS14510 dc14afd02409f5d56fc994c2fa289802 243 Pfam PF04748 Divergent polysaccharide deacetylase 18 224 2.0E-72 T 23-04-2016 IPR006837 Protein of unknown function DUF610, YibQ LT40_RS14510 dc14afd02409f5d56fc994c2fa289802 243 SUPERFAMILY SSF88713 15 225 4.45E-67 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LT40_RS14510 dc14afd02409f5d56fc994c2fa289802 243 Gene3D G3DSA:3.20.20.370 11 231 2.8E-84 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 LT40_RS14510 dc14afd02409f5d56fc994c2fa289802 243 PANTHER PTHR30105 11 242 1.8E-79 T 23-04-2016 LT40_RS14425 eeb710086548cd353239464d006a3b52 136 Pfam PF03692 Putative zinc- or iron-chelating domain 25 125 3.9E-14 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein LT40_RS16795 dfebf912f26ccdc40b6bf96568f06120 157 PIRSF PIRSF016548 1 156 2.2E-62 T 23-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 LT40_RS16795 dfebf912f26ccdc40b6bf96568f06120 157 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 146 1.3E-50 T 23-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 LT40_RS14450 ff1199f437a9517283351ceab74ba817 172 Pfam PF13511 Domain of unknown function (DUF4124) 8 59 2.2E-15 T 23-04-2016 IPR025392 Domain of unknown function DUF4124 LT40_RS09865 c525481fc7b2f93cabe1a017dd41128d 91 Pfam PF07865 Protein of unknown function (DUF1652) 13 79 5.7E-24 T 23-04-2016 IPR012448 Protein of unknown function DUF1652 LT40_RS12150 9bf8a04c5e1852e7a53a11bf2487885c 93 Pfam PF03692 Putative zinc- or iron-chelating domain 13 81 4.1E-10 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein LT40_RS05510 3f58283d437ec9130f4d4ab1bcb541e8 90 Pfam PF11275 Protein of unknown function (DUF3077) 9 82 5.7E-14 T 23-04-2016 IPR021427 Protein of unknown function DUF3077 LT40_RS04455 52029ef993f343da6d4caa28f46784f0 339 Pfam PF16263 Domain of unknown function (DUF4917) 25 321 1.1E-45 T 23-04-2016 IPR032581 Protein of unknown function DUF4917 LT40_RS20660 1a1c51667a60992b92aaf5a8fffa4a42 358 Pfam PF05359 Domain of Unknown Function (DUF748) 139 275 3.6E-12 T 23-04-2016 IPR008023 Protein of unknown function DUF748 LT40_RS14635 27940754ec586fc31fc1fc093c4ff9d3 107 Pfam PF11872 Protein of unknown function (DUF3392) 4 107 5.2E-32 T 23-04-2016 IPR021813 Protein of unknown function DUF3392 LT40_RS02715 78e42d5dcd4c3b36606b5b5d53357f3b 495 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 479 1.2E-97 T 23-04-2016 IPR010352 Protein of unknown function DUF945 LT40_RS11155 536699cc56ea4c2244a939aff552b493 177 Pfam PF13778 Domain of unknown function (DUF4174) 26 144 5.0E-23 T 23-04-2016 IPR025232 Domain of unknown function DUF4174 LT40_RS02060 d3cdc9f5161a9234f26a0fbdbd996776 90 Pfam PF09928 Predicted small integral membrane protein (DUF2160) 3 90 1.3E-38 T 23-04-2016 IPR018678 Protein of unknown function DUF2160, transmembrane LT40_RS16560 099f837bf4c85870f378a1e8079553d3 120 Pfam PF05899 Protein of unknown function (DUF861) 41 113 1.7E-22 T 23-04-2016 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 LT40_RS16560 099f837bf4c85870f378a1e8079553d3 120 Gene3D G3DSA:2.60.120.10 18 118 1.6E-35 T 23-04-2016 IPR014710 RmlC-like jelly roll fold LT40_RS16560 099f837bf4c85870f378a1e8079553d3 120 PANTHER PTHR40943 1 120 3.4E-51 T 23-04-2016 LT40_RS16560 099f837bf4c85870f378a1e8079553d3 120 SUPERFAMILY SSF51182 14 116 2.22E-20 T 23-04-2016 IPR011051 RmlC-like cupin domain LT40_RS00170 adc86cac71739d97c5e6456cb6c5729e 372 Pfam PF06804 NlpB/DapX lipoprotein 36 369 3.6E-27 T 23-04-2016 IPR010653 NlpB/DapX lipoprotein LT40_RS13170 650d27f1edfa89318a3cb34aee2a4ccc 404 Pfam PF14486 Domain of unknown function (DUF4432) 63 367 1.1E-109 T 23-04-2016 IPR027839 Protein of unknown function DUF4432 LT40_RS20225 365cbfc5beba7fd0d0814ece4428357b 104 Gene3D G3DSA:3.40.50.300 4 102 3.0E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS20225 365cbfc5beba7fd0d0814ece4428357b 104 Pfam PF13481 AAA domain 7 100 4.2E-14 T 23-04-2016 LT40_RS20225 365cbfc5beba7fd0d0814ece4428357b 104 SUPERFAMILY SSF52540 14 91 4.18E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase LT40_RS09240 439851528b1813da00cf8bdc5f0b5e36 407 Pfam PF04932 O-Antigen ligase 206 330 6.3E-10 T 23-04-2016 IPR007016 O-antigen ligase-related LT40_RS20765 bfdc9bae756da914ff9b4516feedd59e 109 Pfam PF02656 Domain of unknown function (DUF202) 10 72 2.3E-13 T 23-04-2016 IPR003807 Domain of unknown function DUF202 LT40_RS20765 bfdc9bae756da914ff9b4516feedd59e 109 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 8 84 3.0E-13 T 23-04-2016 IPR020264 Uncharacterised protein family YidG LT40_RS16220 03a1c5046f93e7cf40c7c313d62b38dc 129 Pfam PF11743 Protein of unknown function (DUF3301) 8 101 5.3E-28 T 23-04-2016 IPR021732 Protein of unknown function DUF3301 LT40_RS14140 6118dd1c19f594cc8d38060efbb491dc 190 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 12 182 2.4E-44 T 23-04-2016 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE LT40_RS04635 c5ae7e6c48f63384774d5fd5009ea530 125 Pfam PF16137 Domain of unknown function (DUF4845) 31 116 1.3E-20 T 23-04-2016 IPR032314 Protein of unknown function DUF4845 LT40_RS06500 fb9563e9c2edb3f2094f44e2b40811c2 142 PIRSF PIRSF029509 1 142 1.2E-42 T 23-04-2016 IPR016923 Uncharacterised conserved protein UCP029509, membrane LT40_RS11005 12e8b059e4e3829fd07ace0bc39a0fc1 263 PANTHER PTHR30269:SF25 11 263 1.0E-142 T 23-04-2016 LT40_RS11005 12e8b059e4e3829fd07ace0bc39a0fc1 263 PANTHER PTHR30269 11 263 1.0E-142 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LT40_RS11005 12e8b059e4e3829fd07ace0bc39a0fc1 263 Pfam PF01925 Sulfite exporter TauE/SafE 20 254 1.6E-42 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 LT40_RS10295 648dd0d8f1028e6738930f205803f8da 225 Pfam PF09490 Probable cobalt transporter subunit (CbtA) 3 220 1.7E-65 T 23-04-2016 IPR012666 Cobalt transporter subunit CbtA, putative LT40_RS10295 648dd0d8f1028e6738930f205803f8da 225 TIGRFAM TIGR02458 CbtA: cobalt transporter subunit CbtA (proposed) 1 222 4.4E-82 T 23-04-2016 IPR012666 Cobalt transporter subunit CbtA, putative LT40_RS09795 d89c1741dfe12701116b881723df5bcb 428 Pfam PF10011 Predicted membrane protein (DUF2254) 14 381 2.4E-101 T 23-04-2016 IPR018723 Protein of unknown function DUF2254, membrane LT40_RS03725 07782ae7cd1f198a8d4e8f011360ced5 1271 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 13 1268 0.0 T 23-04-2016 IPR011836 Conserved hypothetical protein CHP02099 LT40_RS03725 07782ae7cd1f198a8d4e8f011360ced5 1271 PANTHER PTHR38690 3 1269 7.9E-275 T 23-04-2016 LT40_RS03725 07782ae7cd1f198a8d4e8f011360ced5 1271 Pfam PF13116 Protein of unknown function 514 790 3.3E-48 T 23-04-2016 IPR025263 Domain of unknown function DUF3971 LT40_RS03725 07782ae7cd1f198a8d4e8f011360ced5 1271 Pfam PF13502 AsmA-like C-terminal region 1017 1262 1.4E-47 T 23-04-2016 IPR032712 AsmA-like, C-terminal LT40_RS08675 d7b6f60261ee058b28397b010bd2de52 142 SMART SM00990 20 123 5.5E-8 T 23-04-2016 IPR014883 VRR-NUC domain GO:0016788 LT40_RS08675 d7b6f60261ee058b28397b010bd2de52 142 Pfam PF08774 VRR-NUC domain 21 122 1.6E-14 T 23-04-2016 IPR014883 VRR-NUC domain GO:0016788 LT40_RS02760 a13323a9bfea1c7dfe76c994b0479aad 256 Pfam PF03692 Putative zinc- or iron-chelating domain 7 116 7.2E-10 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein LT40_RS06620 a831287ce7a0f3f4364e081d676a3245 180 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 180 1.9E-59 T 23-04-2016 IPR018636 Protein of unknown function DUF2058 LT40_RS02825 17430bcf112098eab278c9608a437e00 78 Pfam PF10982 Protein of unknown function (DUF2789) 1 74 6.5E-31 T 23-04-2016 IPR021250 Protein of unknown function DUF2789 LT40_RS06035 ea8324e391e1d1f3f44a3cf16caff2b5 159 PANTHER PTHR35175 1 76 1.5E-23 T 23-04-2016 LT40_RS06035 ea8324e391e1d1f3f44a3cf16caff2b5 159 PANTHER PTHR35175:SF2 1 76 1.5E-23 T 23-04-2016 LT40_RS06035 ea8324e391e1d1f3f44a3cf16caff2b5 159 Pfam PF06945 Protein of unknown function (DUF1289) 8 53 2.6E-15 T 23-04-2016 IPR010710 Protein of unknown function DUF1289 LT40_RS16805 40ec0032b2a93e7610772b5b2c489d69 248 ProDom PD032367 ALGINATE REGULATORY ALGR3 ALGP TRANSCRIPTION TRANSCRIPTIONAL DNA-BINDING ACTIVATOR KINASES KINASE 1 123 2.0E-25 T 23-04-2016 LT40_RS06190 817183716e21d941722d772591c786a1 78 Pfam PF06305 Protein of unknown function (DUF1049) 26 74 1.3E-7 T 23-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 LT40_RS09350 0e6095373fa1b34f80c087f9265fcd70 164 Pfam PF06073 Bacterial protein of unknown function (DUF934) 55 161 3.2E-44 T 23-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 LT40_RS09350 0e6095373fa1b34f80c087f9265fcd70 164 PIRSF PIRSF030820 1 164 8.1E-63 T 23-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 LT40_RS08740 de89b1f5c5ca34277930d591b91ba68a 113 Pfam PF05135 Phage gp6-like head-tail connector protein 5 108 2.5E-12 T 23-04-2016 IPR021146 Phage gp6-like head-tail connector protein LT40_RS00820 9e2b345cef78b922705e247997738db5 156 Pfam PF05425 Copper resistance protein D 49 150 1.1E-10 T 23-04-2016 IPR008457 Copper resistance protein D GO:0016021 LT40_RS13385 51d13a6a5035df66d189d56a5d241d83 156 Pfam PF01478 Type IV leader peptidase family 4 107 1.1E-5 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 LT40_RS04195 4c90d57b1f35092490f499abd6fcdecd 354 Pfam PF09375 Imelysin 37 332 1.2E-49 T 23-04-2016 LT40_RS16920 df5e181dc32565e68d98459127c095a9 69 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 5 69 3.3E-29 T 23-04-2016 IPR012662 Conserved hypothetical protein CHP02449 LT40_RS05500 579ae3cdf2541e01673800cd74d152c5 93 Gene3D G3DSA:1.25.40.10 21 66 9.9E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LT40_RS08665 abc5083b5b69a3e0c6ce081224ebf8cb 224 Pfam PF06992 Replication protein P 63 122 1.8E-10 T 23-04-2016 IPR009731 Replication P GO:0006270 LT40_RS10375 c212a88c62ec832220306a07a697e024 321 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 122 1.8E-14 T 23-04-2016 IPR021104 KfrA, N-terminal DNA-binding domain LT40_RS07660 2d9057f70446d943a2f4c620d23fc648 308 Pfam PF00487 Fatty acid desaturase 55 281 2.1E-31 T 23-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 LT40_RS19695 0fc2f05484a06be4e8f5a1963222071b 278 PANTHER PTHR38684 2 276 5.1E-63 T 23-04-2016 LT40_RS02555 87772022b484a2809cd6c30a5ed60793 130 Pfam PF10975 Protein of unknown function (DUF2802) 63 129 5.2E-21 T 23-04-2016 IPR021244 Protein of unknown function DUF2802 LT40_RS08090 62e4ca50615ca1b68f0a3bf00d6574ea 94 Pfam PF01810 LysE type translocator 2 91 1.8E-9 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 LT40_RS01320 0c1d193cfb538697fd165bd39642681c 63 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 56 5.4E-11 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal LT40_RS06965 b63fcd133f36e579fb7f9abf1ec8718a 73 Pfam PF13396 Phospholipase_D-nuclease N-terminal 16 57 1.7E-8 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal LT40_RS08005 90545cb570bd7b27849ac0b232ccc683 355 Pfam PF14486 Domain of unknown function (DUF4432) 37 342 1.5E-16 T 23-04-2016 IPR027839 Protein of unknown function DUF4432 LT40_RS10520 366ad410ba29e5eeab9cc77680a0ae59 522 SUPERFAMILY SSF103473 272 444 5.62E-12 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS10520 366ad410ba29e5eeab9cc77680a0ae59 522 SUPERFAMILY SSF103473 483 506 5.62E-12 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS10520 366ad410ba29e5eeab9cc77680a0ae59 522 SUPERFAMILY SSF103473 35 222 5.62E-12 T 23-04-2016 IPR020846 Major facilitator superfamily domain LT40_RS10520 366ad410ba29e5eeab9cc77680a0ae59 522 Gene3D G3DSA:1.20.1250.20 484 504 7.7E-4 T 23-04-2016 LT40_RS10520 366ad410ba29e5eeab9cc77680a0ae59 522 Gene3D G3DSA:1.20.1250.20 281 445 7.7E-4 T 23-04-2016 LT40_RS20605 28209d57400f9e3ae8719ce5fd473c76 374 Pfam PF06551 Protein of unknown function (DUF1120) 190 253 3.1E-9 T 23-04-2016 IPR010546 Protein of unknown function DUF1120 LT40_RS19365 cbdef0b49565d56c9029480e1e4272a5 617 Pfam PF13387 Domain of unknown function (DUF4105) 118 290 2.2E-59 T 23-04-2016 IPR025178 Domain of unknown function DUF4105 LT40_RS15800 4e956e42c5fe668311e3a305c57719b1 243 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 61 216 6.4E-38 T 23-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 LT40_RS17495 13ccd91374a5be54354fa9c093e5f664 138 Pfam PF11215 Protein of unknown function (DUF3010) 2 132 2.0E-37 T 23-04-2016 IPR021378 Protein of unknown function DUF3010 LT40_RS01845 e14df7f4284275e22e0c8990f6c7a939 83 Pfam PF11839 Alanine-zipper, major outer membrane lipoprotein 3 83 1.1E-10 T 23-04-2016 IPR021793 Major outer membrane lipoprotein Oprl