locus-tag class description DJ564_RS00005 PF13361 UvrD-like helicase C-terminal domain DJ564_RS00005 PF00580 UvrD/REP helicase N-terminal domain DJ564_RS00010 PF00156 Phosphoribosyl transferase domain DJ564_RS00015 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DJ564_RS00015 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DJ564_RS00020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ564_RS00030 PF00842 Alanine racemase, C-terminal domain DJ564_RS00030 PF01168 Alanine racemase, N-terminal domain DJ564_RS00035 PF01042 Endoribonuclease L-PSP DJ564_RS00040 PF01266 FAD dependent oxidoreductase DJ564_RS00045 PF01037 Lrp/AsnC ligand binding domain DJ564_RS00055 PF01266 FAD dependent oxidoreductase DJ564_RS00065 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS00065 PF00155 Aminotransferase class I and II DJ564_RS00070 PF13091 PLD-like domain DJ564_RS00080 PF00171 Aldehyde dehydrogenase family DJ564_RS00090 PF00471 Ribosomal protein L33 DJ564_RS00095 PF00830 Ribosomal L28 family DJ564_RS00100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ564_RS00105 PF04002 RadC-like JAB domain DJ564_RS00110 PF04127 DNA / pantothenate metabolism flavoprotein DJ564_RS00110 PF02441 Flavoprotein DJ564_RS00115 PF00692 dUTPase DJ564_RS00120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJ564_RS00120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJ564_RS00120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJ564_RS00120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJ564_RS00125 PF00696 Amino acid kinase family DJ564_RS00135 PF00156 Phosphoribosyl transferase domain DJ564_RS00140 PF03372 Endonuclease/Exonuclease/phosphatase family DJ564_RS00150 PF01138 3' exoribonuclease family, domain 1 DJ564_RS00150 PF03725 3' exoribonuclease family, domain 2 DJ564_RS00155 PF03755 YicC-like family, N-terminal region DJ564_RS00155 PF08340 Domain of unknown function (DUF1732) DJ564_RS00160 PF00625 Guanylate kinase DJ564_RS00165 PF01192 RNA polymerase Rpb6 DJ564_RS00170 PF02824 TGS domain DJ564_RS00170 PF04607 Region found in RelA / SpoT proteins DJ564_RS00170 PF13291 ACT domain DJ564_RS00175 PF01042 Endoribonuclease L-PSP DJ564_RS00195 PF01618 MotA/TolQ/ExbB proton channel family DJ564_RS00200 PF02472 Biopolymer transport protein ExbD/TolR DJ564_RS00205 PF03544 Gram-negative bacterial TonB protein C-terminal DJ564_RS00210 PF03466 LysR substrate binding domain DJ564_RS00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS00215 PF00270 DEAD/DEAH box helicase DJ564_RS00215 PF00271 Helicase conserved C-terminal domain DJ564_RS00215 PF17191 RecG wedge domain DJ564_RS00250 PF04717 Type VI secretion system, phage-baseplate injector DJ564_RS00255 PF00069 Protein kinase domain DJ564_RS00255 PF03793 PASTA domain DJ564_RS00265 PF06761 Intracellular multiplication and human macrophage-killing DJ564_RS00265 PF14331 ImcF-related N-terminal domain DJ564_RS00265 PF06744 Type VI secretion protein IcmF C-terminal DJ564_RS00275 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE DJ564_RS00300 PF02954 Bacterial regulatory protein, Fis family DJ564_RS00300 PF00072 Response regulator receiver domain DJ564_RS00300 PF00158 Sigma-54 interaction domain DJ564_RS00305 PF07724 AAA domain (Cdc48 subfamily) DJ564_RS00305 PF17871 AAA lid domain DJ564_RS00305 PF10431 C-terminal, D2-small domain, of ClpB protein DJ564_RS00305 PF00004 ATPase family associated with various cellular activities (AAA) DJ564_RS00315 PF05947 Type VI secretion system, TssF DJ564_RS00345 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath DJ564_RS00360 PF00216 Bacterial DNA-binding protein DJ564_RS00365 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS00365 PF18113 Rubredoxin binding C-terminal domain DJ564_RS00370 PF00301 Rubredoxin DJ564_RS00375 PF04345 Chorismate lyase DJ564_RS00380 PF01040 UbiA prenyltransferase family DJ564_RS00390 PF00072 Response regulator receiver domain DJ564_RS00390 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS00395 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS00395 PF00989 PAS fold DJ564_RS00395 PF11808 Phosphate regulon sensor protein PhoR DJ564_RS00400 PF01595 Cyclin M transmembrane N-terminal domain DJ564_RS00400 PF00571 CBS domain DJ564_RS00400 PF03471 Transporter associated domain DJ564_RS00410 PF01551 Peptidase family M23 DJ564_RS00410 PF08525 Opacity-associated protein A N-terminal motif DJ564_RS00410 PF01476 LysM domain DJ564_RS00415 PF00072 Response regulator receiver domain DJ564_RS00420 PF01895 PhoU domain DJ564_RS00425 PF00005 ABC transporter DJ564_RS00430 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS00435 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS00440 PF12849 PBP superfamily domain DJ564_RS00445 PF07690 Major Facilitator Superfamily DJ564_RS00450 PF03061 Thioesterase superfamily DJ564_RS00470 PF02222 ATP-grasp domain DJ564_RS00470 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DJ564_RS00475 PF00731 AIR carboxylase DJ564_RS00480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS00480 PF03466 LysR substrate binding domain DJ564_RS00485 PF10415 Fumarase C C-terminus DJ564_RS00485 PF00206 Lyase DJ564_RS00490 PF01235 Sodium:alanine symporter family DJ564_RS00495 PF00710 Asparaginase, N-terminal DJ564_RS00495 PF17763 Glutaminase/Asparaginase C-terminal domain DJ564_RS00500 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DJ564_RS00500 PF12833 Helix-turn-helix domain DJ564_RS00510 PF00850 Histone deacetylase domain DJ564_RS00515 PF13416 Bacterial extracellular solute-binding protein DJ564_RS00525 PF00155 Aminotransferase class I and II DJ564_RS00525 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS00550 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS00555 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS00570 PF00364 Biotin-requiring enzyme DJ564_RS00570 PF00682 HMGL-like DJ564_RS00570 PF02436 Conserved carboxylase domain DJ564_RS00575 PF02785 Biotin carboxylase C-terminal domain DJ564_RS00575 PF00289 Biotin carboxylase, N-terminal domain DJ564_RS00575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ564_RS00580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS00580 PF03466 LysR substrate binding domain DJ564_RS00590 PF01380 SIS domain DJ564_RS00590 PF01418 Helix-turn-helix domain, rpiR family DJ564_RS00595 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS00595 PF00563 EAL domain DJ564_RS00595 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS00600 PF00580 UvrD/REP helicase N-terminal domain DJ564_RS00600 PF13361 UvrD-like helicase C-terminal domain DJ564_RS00615 PF00999 Sodium/hydrogen exchanger family DJ564_RS00615 PF02254 TrkA-N domain DJ564_RS00620 PF03061 Thioesterase superfamily DJ564_RS00635 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ564_RS00635 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ564_RS00650 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ564_RS00650 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ564_RS00660 PF01520 N-acetylmuramoyl-L-alanine amidase DJ564_RS00660 PF11741 AMIN domain DJ564_RS00665 PF02649 Type I GTP cyclohydrolase folE2 DJ564_RS00670 PF00005 ABC transporter DJ564_RS00675 PF00950 ABC 3 transport family DJ564_RS00680 PF01297 Zinc-uptake complex component A periplasmic DJ564_RS00690 PF01979 Amidohydrolase family DJ564_RS00695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ564_RS00695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ564_RS00695 PF02824 TGS domain DJ564_RS00695 PF03129 Anticodon binding domain DJ564_RS00695 PF02824 TGS domain DJ564_RS00695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ564_RS00695 PF03129 Anticodon binding domain DJ564_RS00695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ564_RS00700 PF12276 Protein of unknown function (DUF3617) DJ564_RS00705 PF13091 PLD-like domain DJ564_RS00705 PF13396 Phospholipase_D-nuclease N-terminal DJ564_RS00720 PF05114 Protein of unknown function (DUF692) DJ564_RS00730 PF00403 Heavy-metal-associated domain DJ564_RS00750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ564_RS00750 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS00755 PF01037 Lrp/AsnC ligand binding domain DJ564_RS00760 PF01810 LysE type translocator DJ564_RS00780 PF08241 Methyltransferase domain DJ564_RS00785 PF01757 Acyltransferase family DJ564_RS00800 PF16363 GDP-mannose 4,6 dehydratase DJ564_RS00805 PF16363 GDP-mannose 4,6 dehydratase DJ564_RS00810 PF01050 Mannose-6-phosphate isomerase DJ564_RS00810 PF00483 Nucleotidyl transferase DJ564_RS00820 PF00005 ABC transporter DJ564_RS00830 PF00534 Glycosyl transferases group 1 DJ564_RS00830 PF13439 Glycosyltransferase Family 4 DJ564_RS00835 PF13439 Glycosyltransferase Family 4 DJ564_RS00835 PF00534 Glycosyl transferases group 1 DJ564_RS00845 PF00175 Oxidoreductase NAD-binding domain DJ564_RS00845 PF00042 Globin DJ564_RS00845 PF00970 Oxidoreductase FAD-binding domain DJ564_RS00850 PF02798 Glutathione S-transferase, N-terminal domain DJ564_RS00855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS00855 PF03466 LysR substrate binding domain DJ564_RS00865 PF00689 Cation transporting ATPase, C-terminus DJ564_RS00865 PF00690 Cation transporter/ATPase, N-terminus DJ564_RS00875 PF06965 Na+/H+ antiporter 1 DJ564_RS00880 PF02386 Cation transport protein DJ564_RS00890 PF16868 NMT1-like family DJ564_RS00905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DJ564_RS00910 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DJ564_RS00915 PF03480 Bacterial extracellular solute-binding protein, family 7 DJ564_RS00920 PF00582 Universal stress protein family DJ564_RS00925 PF03741 Integral membrane protein TerC family DJ564_RS00940 PF01380 SIS domain DJ564_RS00945 PF00455 DeoR C terminal sensor domain DJ564_RS00945 PF08220 DeoR-like helix-turn-helix domain DJ564_RS00950 PF12804 MobA-like NTP transferase domain DJ564_RS00950 PF00132 Bacterial transferase hexapeptide (six repeats) DJ564_RS00950 PF14602 Hexapeptide repeat of succinyl-transferase DJ564_RS00955 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DJ564_RS00955 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DJ564_RS00960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ564_RS00960 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJ564_RS00965 PF00231 ATP synthase DJ564_RS00970 PF00306 ATP synthase alpha/beta chain, C terminal domain DJ564_RS00970 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJ564_RS00970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ564_RS00975 PF00213 ATP synthase delta (OSCP) subunit DJ564_RS00980 PF00430 ATP synthase B/B' CF(0) DJ564_RS00985 PF00137 ATP synthase subunit C DJ564_RS00990 PF00119 ATP synthase A chain DJ564_RS00995 PF03899 ATP synthase I chain DJ564_RS01000 PF17762 HTH domain found in ParB protein DJ564_RS01000 PF02195 ParB-like nuclease domain DJ564_RS01005 PF13614 AAA domain DJ564_RS01010 PF02527 rRNA small subunit methyltransferase G DJ564_RS01015 PF01134 Glucose inhibited division protein A DJ564_RS01015 PF13932 GidA associated domain DJ564_RS01025 PF10396 GTP-binding protein TrmE N-terminus DJ564_RS01025 PF01926 50S ribosome-binding GTPase DJ564_RS01025 PF12631 MnmE helical domain DJ564_RS01030 PF02096 60Kd inner membrane protein DJ564_RS01030 PF14849 YidC periplasmic domain DJ564_RS01035 PF01809 Putative membrane protein insertion efficiency factor DJ564_RS01040 PF00825 Ribonuclease P DJ564_RS01045 PF00468 Ribosomal protein L34 DJ564_RS01050 PF08299 Bacterial dnaA protein helix-turn-helix DJ564_RS01050 PF11638 DnaA N-terminal domain DJ564_RS01050 PF00308 Bacterial dnaA protein DJ564_RS01055 PF00712 DNA polymerase III beta subunit, N-terminal domain DJ564_RS01055 PF02767 DNA polymerase III beta subunit, central domain DJ564_RS01055 PF02768 DNA polymerase III beta subunit, C-terminal domain DJ564_RS01060 PF02463 RecF/RecN/SMC N terminal domain DJ564_RS01065 PF01751 Toprim domain DJ564_RS01065 PF00204 DNA gyrase B DJ564_RS01065 PF18053 DNA gyrase B subunit insert domain DJ564_RS01065 PF00986 DNA gyrase B subunit, carboxyl terminus DJ564_RS01065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS01080 PF02092 Glycyl-tRNA synthetase beta subunit DJ564_RS01080 PF05746 DALR anticodon binding domain DJ564_RS01085 PF02091 Glycyl-tRNA synthetase alpha subunit DJ564_RS01090 PF03352 Methyladenine glycosylase DJ564_RS01110 PF02080 TrkA-C domain DJ564_RS01110 PF02254 TrkA-N domain DJ564_RS01115 PF01189 16S rRNA methyltransferase RsmB/F DJ564_RS01115 PF01029 NusB family DJ564_RS01120 PF02911 Formyl transferase, C-terminal domain DJ564_RS01120 PF00551 Formyl transferase DJ564_RS01125 PF01327 Polypeptide deformylase DJ564_RS01135 PF02481 DNA recombination-mediator protein A DJ564_RS01135 PF17782 DprA winged helix domain DJ564_RS01140 PF01300 Telomere recombination DJ564_RS01145 PF00107 Zinc-binding dehydrogenase DJ564_RS01145 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS01150 PF01218 Coproporphyrinogen III oxidase DJ564_RS01155 PF08501 Shikimate dehydrogenase substrate binding domain DJ564_RS01155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DJ564_RS01155 PF01488 Shikimate / quinate 5-dehydrogenase DJ564_RS01160 PF00916 Sulfate permease family DJ564_RS01160 PF01740 STAS domain DJ564_RS01165 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DJ564_RS01170 PF12411 Choline sulfatase enzyme C terminal DJ564_RS01170 PF00884 Sulfatase DJ564_RS01175 PF03466 LysR substrate binding domain DJ564_RS01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS01200 PF03600 Citrate transporter DJ564_RS01205 PF03741 Integral membrane protein TerC family DJ564_RS01215 PF02690 Na+/Pi-cotransporter DJ564_RS01220 PF05193 Peptidase M16 inactive domain DJ564_RS01220 PF00675 Insulinase (Peptidase family M16) DJ564_RS01235 PF02405 Permease MlaE DJ564_RS01240 PF00005 ABC transporter DJ564_RS01260 PF07670 Nucleoside recognition DJ564_RS01265 PF00375 Sodium:dicarboxylate symporter family DJ564_RS01280 PF07043 Protein of unknown function (DUF1328) DJ564_RS01290 PF02954 Bacterial regulatory protein, Fis family DJ564_RS01290 PF00072 Response regulator receiver domain DJ564_RS01290 PF00158 Sigma-54 interaction domain DJ564_RS01295 PF00672 HAMP domain DJ564_RS01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS01295 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS01295 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB DJ564_RS01295 PF08448 PAS fold DJ564_RS01300 PF00563 EAL domain DJ564_RS01300 PF12792 CSS motif domain associated with EAL DJ564_RS01305 PF01510 N-acetylmuramoyl-L-alanine amidase DJ564_RS01310 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS01320 PF01323 DSBA-like thioredoxin domain DJ564_RS01325 PF00034 Cytochrome c DJ564_RS01335 PF01926 50S ribosome-binding GTPase DJ564_RS01340 PF01367 5'-3' exonuclease, C-terminal SAM fold DJ564_RS01340 PF00476 DNA polymerase family A DJ564_RS01340 PF01612 3'-5' exonuclease DJ564_RS01340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJ564_RS01350 PF01636 Phosphotransferase enzyme family DJ564_RS01355 PF01297 Zinc-uptake complex component A periplasmic DJ564_RS01360 PF01475 Ferric uptake regulator family DJ564_RS01365 PF00005 ABC transporter DJ564_RS01370 PF00950 ABC 3 transport family DJ564_RS01380 PF06628 Catalase-related immune-responsive DJ564_RS01380 PF00199 Catalase DJ564_RS01380 PF18011 C-terminal domain found in long catalases DJ564_RS01390 PF00005 ABC transporter DJ564_RS01390 PF09383 NIL domain DJ564_RS01395 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS01400 PF03180 NLPA lipoprotein DJ564_RS01405 PF02630 SCO1/SenC DJ564_RS01410 PF01040 UbiA prenyltransferase family DJ564_RS01415 PF02628 Cytochrome oxidase assembly protein DJ564_RS01425 PF02104 SURF1 family DJ564_RS01435 PF00510 Cytochrome c oxidase subunit III DJ564_RS01440 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DJ564_RS01445 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ564_RS01450 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DJ564_RS01450 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DJ564_RS01465 PF01740 STAS domain DJ564_RS01465 PF00916 Sulfate permease family DJ564_RS01470 PF00484 Carbonic anhydrase DJ564_RS01475 PF04055 Radical SAM superfamily DJ564_RS01490 PF01432 Peptidase family M3 DJ564_RS01495 PF09526 Probable metal-binding protein (DUF2387) DJ564_RS01500 PF01432 Peptidase family M3 DJ564_RS01505 PF00132 Bacterial transferase hexapeptide (six repeats) DJ564_RS01510 PF13419 Haloacid dehalogenase-like hydrolase DJ564_RS01535 PF02566 OsmC-like protein DJ564_RS01540 PF00296 Luciferase-like monooxygenase DJ564_RS01550 PF07311 Dodecin DJ564_RS01560 PF03466 LysR substrate binding domain DJ564_RS01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS01565 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS01570 PF00290 Tryptophan synthase alpha chain DJ564_RS01610 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DJ564_RS01610 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DJ564_RS01615 PF02233 NAD(P) transhydrogenase beta subunit DJ564_RS01620 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DJ564_RS01625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DJ564_RS01625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ564_RS01630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS01630 PF03466 LysR substrate binding domain DJ564_RS01635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS01635 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS01635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS01640 PF02515 CoA-transferase family III DJ564_RS01685 PF00672 HAMP domain DJ564_RS01685 PF02743 Cache domain DJ564_RS01685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS01695 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS01695 PF00668 Condensation domain DJ564_RS01695 PF00550 Phosphopantetheine attachment site DJ564_RS01695 PF00501 AMP-binding enzyme DJ564_RS01695 PF07993 Male sterility protein DJ564_RS01710 PF07729 FCD domain DJ564_RS01710 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS01720 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS01720 PF00563 EAL domain DJ564_RS01720 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS01720 PF13188 PAS domain DJ564_RS01735 PF02321 Outer membrane efflux protein DJ564_RS01740 PF00664 ABC transporter transmembrane region DJ564_RS01740 PF03412 Peptidase C39 family DJ564_RS01740 PF00005 ABC transporter DJ564_RS01745 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS01745 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS01750 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DJ564_RS01760 PF00005 ABC transporter DJ564_RS01765 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS01770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS01770 PF03466 LysR substrate binding domain DJ564_RS01775 PF07690 Major Facilitator Superfamily DJ564_RS01780 PF13533 Biotin-lipoyl like DJ564_RS01785 PF02321 Outer membrane efflux protein DJ564_RS01800 PF01145 SPFH domain / Band 7 family DJ564_RS01800 PF16200 C-terminal region of band_7 DJ564_RS01825 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DJ564_RS01840 PF04632 Fusaric acid resistance protein family DJ564_RS01850 PF13533 Biotin-lipoyl like DJ564_RS01855 PF02321 Outer membrane efflux protein DJ564_RS01865 PF06097 Bacterial protein of unknown function (DUF945) DJ564_RS01870 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS01870 PF14759 Reductase C-terminal DJ564_RS01880 PF12034 Domain of unknown function (DUF3520) DJ564_RS01880 PF12450 von Willebrand factor DJ564_RS01880 PF00092 von Willebrand factor type A domain DJ564_RS01885 PF08281 Sigma-70, region 4 DJ564_RS01885 PF04542 Sigma-70 region 2 DJ564_RS01905 PF00171 Aldehyde dehydrogenase family DJ564_RS01910 PF00202 Aminotransferase class-III DJ564_RS01915 PF00072 Response regulator receiver domain DJ564_RS01915 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS01920 PF08448 PAS fold DJ564_RS01920 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS01930 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS01930 PF00563 EAL domain DJ564_RS01930 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS01945 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS01950 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS01955 PF12857 TOBE-like domain DJ564_RS01955 PF00005 ABC transporter DJ564_RS01975 PF00072 Response regulator receiver domain DJ564_RS01975 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS01990 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DJ564_RS01990 PF12833 Helix-turn-helix domain DJ564_RS02005 PF00158 Sigma-54 interaction domain DJ564_RS02010 PF03180 NLPA lipoprotein DJ564_RS02015 PF13476 AAA domain DJ564_RS02020 PF13533 Biotin-lipoyl like DJ564_RS02030 PF00873 AcrB/AcrD/AcrF family DJ564_RS02045 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS02050 PF00005 ABC transporter DJ564_RS02050 PF09383 NIL domain DJ564_RS02055 PF03180 NLPA lipoprotein DJ564_RS02060 PF00296 Luciferase-like monooxygenase DJ564_RS02065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS02065 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS02070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS02070 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS02080 PF00005 ABC transporter DJ564_RS02085 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS02090 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS02095 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS02100 PF00132 Bacterial transferase hexapeptide (six repeats) DJ564_RS02110 PF02028 BCCT, betaine/carnitine/choline family transporter DJ564_RS02135 PF00248 Aldo/keto reductase family DJ564_RS02140 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DJ564_RS02145 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS02150 PF00005 ABC transporter DJ564_RS02155 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DJ564_RS02160 PF04262 Glutamate-cysteine ligase DJ564_RS02170 PF17674 HHH domain DJ564_RS02170 PF16921 Tex protein YqgF-like domain DJ564_RS02170 PF00575 S1 RNA binding domain DJ564_RS02170 PF09371 Tex-like protein N-terminal domain DJ564_RS02175 PF00072 Response regulator receiver domain DJ564_RS02175 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS02180 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS02180 PF00672 HAMP domain DJ564_RS02185 PF18030 RimK PreATP-grasp domain DJ564_RS02185 PF08443 RimK-like ATP-grasp domain DJ564_RS02190 PF08443 RimK-like ATP-grasp domain DJ564_RS02190 PF18030 RimK PreATP-grasp domain DJ564_RS02195 PF00563 EAL domain DJ564_RS02195 PF08495 FIST N domain DJ564_RS02195 PF10442 FIST C domain DJ564_RS02195 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS02200 PF01479 S4 domain DJ564_RS02210 PF01430 Hsp33 protein DJ564_RS02215 PF01293 Phosphoenolpyruvate carboxykinase DJ564_RS02260 PF00570 HRDC domain DJ564_RS02260 PF00271 Helicase conserved C-terminal domain DJ564_RS02260 PF16124 RecQ zinc-binding DJ564_RS02260 PF09382 RQC domain DJ564_RS02260 PF00270 DEAD/DEAH box helicase DJ564_RS02265 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS02265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ564_RS02265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ564_RS02285 PF00384 Molybdopterin oxidoreductase DJ564_RS02290 PF02634 FdhD/NarQ family DJ564_RS02295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS02295 PF03466 LysR substrate binding domain DJ564_RS02300 PF01476 LysM domain DJ564_RS02300 PF04972 BON domain DJ564_RS02305 PF13419 Haloacid dehalogenase-like hydrolase DJ564_RS02310 PF00293 NUDIX domain DJ564_RS02315 PF00459 Inositol monophosphatase family DJ564_RS02325 PF00072 Response regulator receiver domain DJ564_RS02325 PF02954 Bacterial regulatory protein, Fis family DJ564_RS02325 PF00158 Sigma-54 interaction domain DJ564_RS02330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS02330 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS02330 PF02743 Cache domain DJ564_RS02335 PF04321 RmlD substrate binding domain DJ564_RS02340 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DJ564_RS02345 PF00483 Nucleotidyl transferase DJ564_RS02350 PF16363 GDP-mannose 4,6 dehydratase DJ564_RS02355 PF00202 Aminotransferase class-III DJ564_RS02360 PF00795 Carbon-nitrogen hydrolase DJ564_RS02365 PF04371 Porphyromonas-type peptidyl-arginine deiminase DJ564_RS02375 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS02375 PF00593 TonB dependent receptor DJ564_RS02385 PF03573 outer membrane porin, OprD family DJ564_RS02395 PF00583 Acetyltransferase (GNAT) family DJ564_RS02415 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system DJ564_RS02425 PF03812 2-keto-3-deoxygluconate permease DJ564_RS02430 PF07005 Sugar-binding N-terminal domain DJ564_RS02430 PF17042 Nucleotide-binding C-terminal domain DJ564_RS02435 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DJ564_RS02440 PF00455 DeoR C terminal sensor domain DJ564_RS02440 PF08220 DeoR-like helix-turn-helix domain DJ564_RS02460 PF01361 Tautomerase enzyme DJ564_RS02475 PF00106 short chain dehydrogenase DJ564_RS02500 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS02505 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS02510 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS02515 PF00005 ABC transporter DJ564_RS02520 PF00324 Amino acid permease DJ564_RS02545 PF17761 DUF1016 N-terminal domain DJ564_RS02545 PF06250 YhcG PDDEXK nuclease domain DJ564_RS02565 PF04362 Bacterial Fe(2+) trafficking DJ564_RS02570 PF14815 NUDIX domain DJ564_RS02570 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ564_RS02570 PF10576 Iron-sulfur binding domain of endonuclease III DJ564_RS02570 PF00633 Helix-hairpin-helix motif DJ564_RS02585 PF07690 Major Facilitator Superfamily DJ564_RS02590 PF00475 Imidazoleglycerol-phosphate dehydratase DJ564_RS02595 PF00117 Glutamine amidotransferase class-I DJ564_RS02605 PF00977 Histidine biosynthesis protein DJ564_RS02610 PF00977 Histidine biosynthesis protein DJ564_RS02625 PF04748 Divergent polysaccharide deacetylase DJ564_RS02630 PF13180 PDZ domain DJ564_RS02630 PF03572 Peptidase family S41 DJ564_RS02635 PF01551 Peptidase family M23 DJ564_RS02640 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DJ564_RS02640 PF01676 Metalloenzyme superfamily DJ564_RS02650 PF00462 Glutaredoxin DJ564_RS02655 PF02556 Preprotein translocase subunit SecB DJ564_RS02660 PF00588 SpoU rRNA Methylase family DJ564_RS02670 PF00072 Response regulator receiver domain DJ564_RS02670 PF02954 Bacterial regulatory protein, Fis family DJ564_RS02670 PF00158 Sigma-54 interaction domain DJ564_RS02675 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS02675 PF00989 PAS fold DJ564_RS02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS02690 PF00120 Glutamine synthetase, catalytic domain DJ564_RS02690 PF03951 Glutamine synthetase, beta-Grasp domain DJ564_RS02700 PF02926 THUMP domain DJ564_RS02700 PF02568 Thiamine biosynthesis protein (ThiI) DJ564_RS02705 PF03144 Elongation factor Tu domain 2 DJ564_RS02705 PF00679 Elongation factor G C-terminus DJ564_RS02705 PF00009 Elongation factor Tu GTP binding domain DJ564_RS02715 PF00343 Carbohydrate phosphorylase DJ564_RS02730 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DJ564_RS02740 PF02743 Cache domain DJ564_RS02740 PF00672 HAMP domain DJ564_RS02740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS02750 PF08212 Lipocalin-like domain DJ564_RS02755 PF01979 Amidohydrolase family DJ564_RS02760 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS02760 PF07702 UTRA domain DJ564_RS02765 PF05962 HutD DJ564_RS02770 PF17392 Urocanase C-terminal domain DJ564_RS02770 PF17391 Urocanase N-terminal domain DJ564_RS02770 PF01175 Urocanase Rossmann-like domain DJ564_RS02775 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DJ564_RS02785 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS02790 PF00571 CBS domain DJ564_RS02790 PF00005 ABC transporter DJ564_RS02795 PF00221 Aromatic amino acid lyase DJ564_RS02800 PF00221 Aromatic amino acid lyase DJ564_RS02805 PF01979 Amidohydrolase family DJ564_RS02815 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DJ564_RS02820 PF07859 alpha/beta hydrolase fold DJ564_RS02825 PF00561 alpha/beta hydrolase fold DJ564_RS02830 PF02580 D-Tyr-tRNA(Tyr) deacylase DJ564_RS02835 PF04349 Periplasmic glucan biosynthesis protein, MdoG DJ564_RS02840 PF00535 Glycosyl transferase family 2 DJ564_RS02845 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS02850 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS02855 PF00005 ABC transporter DJ564_RS02860 PF16591 Helical bimodular sensor domain DJ564_RS02860 PF00672 HAMP domain DJ564_RS02860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS02870 PF00902 Sec-independent protein translocase protein (TatC) DJ564_RS02875 PF02416 mttA/Hcf106 family DJ564_RS02880 PF02416 mttA/Hcf106 family DJ564_RS02885 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DJ564_RS02890 PF01502 Phosphoribosyl-AMP cyclohydrolase DJ564_RS02895 PF03109 ABC1 family DJ564_RS02905 PF01209 ubiE/COQ5 methyltransferase family DJ564_RS02925 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS02930 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DJ564_RS02935 PF00561 alpha/beta hydrolase fold DJ564_RS02945 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DJ564_RS02960 PF00004 ATPase family associated with various cellular activities (AAA) DJ564_RS02960 PF07724 AAA domain (Cdc48 subfamily) DJ564_RS02965 PF00227 Proteasome subunit DJ564_RS02980 PF05746 DALR anticodon binding domain DJ564_RS02980 PF03485 Arginyl tRNA synthetase N terminal domain DJ564_RS02980 PF00750 tRNA synthetases class I (R) DJ564_RS02985 PF00270 DEAD/DEAH box helicase DJ564_RS02985 PF00271 Helicase conserved C-terminal domain DJ564_RS02985 PF17764 3′ DNA-binding domain (3′BD) DJ564_RS02985 PF18074 Primosomal protein N C-terminal domain DJ564_RS02985 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DJ564_RS02990 PF01197 Ribosomal protein L31 DJ564_RS03000 PF03949 Malic enzyme, NAD binding domain DJ564_RS03000 PF00390 Malic enzyme, N-terminal domain DJ564_RS03005 PF17092 Penicillin-binding protein OB-like domain DJ564_RS03005 PF00905 Penicillin binding protein transpeptidase domain DJ564_RS03005 PF00912 Transglycosylase DJ564_RS03010 PF11104 Type IV pilus assembly protein PilM; DJ564_RS03015 PF05137 Fimbrial assembly protein (PilN) DJ564_RS03020 PF04350 Pilus assembly protein, PilO DJ564_RS03025 PF04351 Pilus assembly protein, PilP DJ564_RS03030 PF03958 Bacterial type II/III secretion system short domain DJ564_RS03030 PF07660 Secretin and TonB N terminus short domain DJ564_RS03030 PF00263 Bacterial type II and III secretion system protein DJ564_RS03030 PF11741 AMIN domain DJ564_RS03035 PF01202 Shikimate kinase DJ564_RS03040 PF01761 3-dehydroquinate synthase DJ564_RS03055 PF01493 GXGXG motif DJ564_RS03055 PF01645 Conserved region in glutamate synthase DJ564_RS03055 PF04898 Glutamate synthase central domain DJ564_RS03055 PF00310 Glutamine amidotransferases class-II DJ564_RS03060 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DJ564_RS03060 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS03065 PF01208 Uroporphyrinogen decarboxylase (URO-D) DJ564_RS03070 PF07690 Major Facilitator Superfamily DJ564_RS03075 PF03466 LysR substrate binding domain DJ564_RS03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS03120 PF06508 Queuosine biosynthesis protein QueC DJ564_RS03125 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ564_RS03125 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ564_RS03140 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ564_RS03140 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ564_RS03175 PF00221 Aromatic amino acid lyase DJ564_RS03190 PF00501 AMP-binding enzyme DJ564_RS03190 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS03200 PF00550 Phosphopantetheine attachment site DJ564_RS03205 PF00550 Phosphopantetheine attachment site DJ564_RS03220 PF13614 AAA domain DJ564_RS03225 PF00085 Thioredoxin DJ564_RS03240 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DJ564_RS03245 PF12794 Mechanosensitive ion channel inner membrane domain 1 DJ564_RS03245 PF00924 Mechanosensitive ion channel DJ564_RS03245 PF12795 Mechanosensitive ion channel porin domain DJ564_RS03250 PF02080 TrkA-C domain DJ564_RS03250 PF03471 Transporter associated domain DJ564_RS03250 PF00999 Sodium/hydrogen exchanger family DJ564_RS03255 PF00672 HAMP domain DJ564_RS03255 PF12729 Four helix bundle sensory module for signal transduction DJ564_RS03255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS03270 PF02743 Cache domain DJ564_RS03270 PF00672 HAMP domain DJ564_RS03270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS03275 PF12806 Acetyl-CoA dehydrogenase C-terminal like DJ564_RS03275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS03275 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS03275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS03280 PF01619 Proline dehydrogenase DJ564_RS03280 PF00171 Aldehyde dehydrogenase family DJ564_RS03280 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DJ564_RS03280 PF14850 DNA-binding domain of Proline dehydrogenase DJ564_RS03285 PF00474 Sodium:solute symporter family DJ564_RS03295 PF04717 Type VI secretion system, phage-baseplate injector DJ564_RS03305 PF05593 RHS Repeat DJ564_RS03305 PF03527 RHS protein DJ564_RS03305 PF03527 RHS protein DJ564_RS03305 PF05593 RHS Repeat DJ564_RS03325 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DJ564_RS03330 PF01625 Peptide methionine sulfoxide reductase DJ564_RS03335 PF00563 EAL domain DJ564_RS03335 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS03335 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS03345 PF00364 Biotin-requiring enzyme DJ564_RS03345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ564_RS03345 PF02817 e3 binding domain DJ564_RS03350 PF00456 Transketolase, thiamine diphosphate binding domain DJ564_RS03350 PF17831 Pyruvate dehydrogenase E1 component middle domain DJ564_RS03355 PF03710 Glutamate-ammonia ligase adenylyltransferase DJ564_RS03355 PF08335 GlnD PII-uridylyltransferase DJ564_RS03365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DJ564_RS03370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DJ564_RS03375 PF13439 Glycosyltransferase Family 4 DJ564_RS03375 PF00534 Glycosyl transferases group 1 DJ564_RS03405 PF02543 Carbamoyltransferase N-terminus DJ564_RS03405 PF16861 Carbamoyltransferase C-terminus DJ564_RS03410 PF00534 Glycosyl transferases group 1 DJ564_RS03410 PF13439 Glycosyltransferase Family 4 DJ564_RS03435 PF00535 Glycosyl transferase family 2 DJ564_RS03445 PF04932 O-Antigen ligase DJ564_RS03450 PF00005 ABC transporter DJ564_RS03450 PF00664 ABC transporter transmembrane region DJ564_RS03455 PF00294 pfkB family carbohydrate kinase DJ564_RS03455 PF01467 Cytidylyltransferase-like DJ564_RS03470 PF01266 FAD dependent oxidoreductase DJ564_RS03475 PF00893 Small Multidrug Resistance protein DJ564_RS03480 PF03466 LysR substrate binding domain DJ564_RS03480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS03485 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DJ564_RS03490 PF02321 Outer membrane efflux protein DJ564_RS03495 PF01964 Radical SAM ThiC family DJ564_RS03495 PF13667 ThiC-associated domain DJ564_RS03510 PF00293 NUDIX domain DJ564_RS03525 PF00149 Calcineurin-like phosphoesterase DJ564_RS03540 PF05728 Uncharacterised protein family (UPF0227) DJ564_RS03545 PF01751 Toprim domain DJ564_RS03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS03545 PF00986 DNA gyrase B subunit, carboxyl terminus DJ564_RS03545 PF00204 DNA gyrase B DJ564_RS03560 PF03989 DNA gyrase C-terminal domain, beta-propeller DJ564_RS03560 PF00521 DNA gyrase/topoisomerase IV, subunit A DJ564_RS03585 PF17882 OAA-family lectin sugar binding domain DJ564_RS03590 PF02666 Phosphatidylserine decarboxylase DJ564_RS03595 PF00581 Rhodanese-like domain DJ564_RS03605 PF01618 MotA/TolQ/ExbB proton channel family DJ564_RS03610 PF13677 Membrane MotB of proton-channel complex MotA/MotB DJ564_RS03610 PF00691 OmpA family DJ564_RS03635 PF03193 RsgA GTPase DJ564_RS03640 PF00929 Exonuclease DJ564_RS03645 PF03458 UPF0126 domain DJ564_RS03650 PF08331 Domain of unknown function (DUF1730) DJ564_RS03655 PF03853 YjeF-related protein N-terminus DJ564_RS03655 PF01256 Carbohydrate kinase DJ564_RS03660 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DJ564_RS03665 PF01520 N-acetylmuramoyl-L-alanine amidase DJ564_RS03665 PF11741 AMIN domain DJ564_RS03670 PF08676 MutL C terminal dimerisation domain DJ564_RS03670 PF01119 DNA mismatch repair protein, C-terminal domain DJ564_RS03680 PF17209 Hfq protein DJ564_RS03685 PF01926 50S ribosome-binding GTPase DJ564_RS03685 PF13167 GTP-binding GTPase N-terminal DJ564_RS03685 PF16360 GTP-binding GTPase Middle Region DJ564_RS03690 PF01145 SPFH domain / Band 7 family DJ564_RS03695 PF01145 SPFH domain / Band 7 family DJ564_RS03700 PF13393 Histidyl-tRNA synthetase DJ564_RS03705 PF00709 Adenylosuccinate synthetase DJ564_RS03710 PF17200 Single Cache domain 2 DJ564_RS03710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS03710 PF00672 HAMP domain DJ564_RS03715 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS03720 PF01547 Bacterial extracellular solute-binding protein DJ564_RS03735 PF00773 RNB domain DJ564_RS03735 PF08206 Ribonuclease B OB domain DJ564_RS03735 PF08461 Ribonuclease R winged-helix domain DJ564_RS03735 PF00575 S1 RNA binding domain DJ564_RS03735 PF17876 Cold shock domain DJ564_RS03740 PF08032 RNA 2'-O ribose methyltransferase substrate binding DJ564_RS03740 PF00588 SpoU rRNA Methylase family DJ564_RS03745 PF01250 Ribosomal protein S6 DJ564_RS03750 PF01084 Ribosomal protein S18 DJ564_RS03760 PF01281 Ribosomal protein L9, N-terminal domain DJ564_RS03760 PF03948 Ribosomal protein L9, C-terminal domain DJ564_RS03765 PF03796 DnaB-like helicase C terminal domain DJ564_RS03765 PF00772 DnaB-like helicase N terminal domain DJ564_RS03770 PF08497 Radical SAM N-terminal DJ564_RS03770 PF11842 Domain of unknown function (DUF3362) DJ564_RS03770 PF04055 Radical SAM superfamily DJ564_RS03780 PF04168 A predicted alpha-helical domain with a conserved ER motif. DJ564_RS03780 PF14403 Circularly permuted ATP-grasp type 2 DJ564_RS03795 PF03641 Possible lysine decarboxylase DJ564_RS03800 PF00127 Copper binding proteins, plastocyanin/azurin family DJ564_RS03805 PF02540 NAD synthase DJ564_RS03810 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DJ564_RS03810 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DJ564_RS03820 PF01235 Sodium:alanine symporter family DJ564_RS03830 PF03466 LysR substrate binding domain DJ564_RS03830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS03835 PF00171 Aldehyde dehydrogenase family DJ564_RS03840 PF01266 FAD dependent oxidoreductase DJ564_RS03845 PF13458 Periplasmic binding protein DJ564_RS03850 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS03855 PF11862 Domain of unknown function (DUF3382) DJ564_RS03855 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS03860 PF12399 Branched-chain amino acid ATP-binding cassette transporter DJ564_RS03860 PF00005 ABC transporter DJ564_RS03865 PF00005 ABC transporter DJ564_RS03875 PF00106 short chain dehydrogenase DJ564_RS03885 PF04955 HupE / UreJ protein DJ564_RS03890 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ564_RS03895 PF01730 UreF DJ564_RS03900 PF02814 UreE urease accessory protein, N-terminal domain DJ564_RS03900 PF05194 UreE urease accessory protein, C-terminal domain DJ564_RS03905 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS03915 PF05170 AsmA family DJ564_RS03925 PF03466 LysR substrate binding domain DJ564_RS03925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS03930 PF02525 Flavodoxin-like fold DJ564_RS03935 PF00893 Small Multidrug Resistance protein DJ564_RS03940 PF00561 alpha/beta hydrolase fold DJ564_RS03945 PF00892 EamA-like transporter family DJ564_RS03955 PF07769 psiF repeat DJ564_RS03965 PF00012 Hsp70 protein DJ564_RS03970 PF01556 DnaJ C terminal domain DJ564_RS03970 PF00226 DnaJ domain DJ564_RS03980 PF08446 PAS fold DJ564_RS03980 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS03980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS03980 PF01590 GAF domain DJ564_RS03980 PF00360 Phytochrome region DJ564_RS03990 PF01979 Amidohydrolase family DJ564_RS03990 PF00449 Urease alpha-subunit, N-terminal domain DJ564_RS03995 PF00699 Urease beta subunit DJ564_RS04000 PF13673 Acetyltransferase (GNAT) domain DJ564_RS04010 PF00547 Urease, gamma subunit DJ564_RS04015 PF01774 UreD urease accessory protein DJ564_RS04020 PF00005 ABC transporter DJ564_RS04030 PF12399 Branched-chain amino acid ATP-binding cassette transporter DJ564_RS04030 PF00005 ABC transporter DJ564_RS04040 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS04045 PF13458 Periplasmic binding protein DJ564_RS04060 PF01032 FecCD transport family DJ564_RS04070 PF00005 ABC transporter DJ564_RS04100 PF01381 Helix-turn-helix DJ564_RS04105 PF05973 Phage derived protein Gp49-like (DUF891) DJ564_RS04110 PF02571 Precorrin-6x reductase CbiJ/CobK DJ564_RS04115 PF01888 CbiD DJ564_RS04120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ564_RS04130 PF02570 Precorrin-8X methylmutase DJ564_RS04135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ564_RS04140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ564_RS04165 PF01914 MarC family integral membrane protein DJ564_RS04170 PF01627 Hpt domain DJ564_RS04170 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS04170 PF00672 HAMP domain DJ564_RS04170 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DJ564_RS04170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS04170 PF00072 Response regulator receiver domain DJ564_RS04175 PF02843 Phosphoribosylglycinamide synthetase, C domain DJ564_RS04175 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DJ564_RS04175 PF02844 Phosphoribosylglycinamide synthetase, N domain DJ564_RS04180 PF01808 AICARFT/IMPCHase bienzyme DJ564_RS04180 PF02142 MGS-like domain DJ564_RS04185 PF02954 Bacterial regulatory protein, Fis family DJ564_RS04190 PF01207 Dihydrouridine synthase (Dus) DJ564_RS04210 PF00289 Biotin carboxylase, N-terminal domain DJ564_RS04210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ564_RS04210 PF02785 Biotin carboxylase C-terminal domain DJ564_RS04215 PF00364 Biotin-requiring enzyme DJ564_RS04220 PF01220 Dehydroquinase class II DJ564_RS04225 PF02683 Cytochrome C biogenesis protein transmembrane region DJ564_RS04225 PF11412 Disulphide bond corrector protein DsbC DJ564_RS04230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS04235 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS04235 PF00072 Response regulator receiver domain DJ564_RS04245 PF00293 NUDIX domain DJ564_RS04250 PF01253 Translation initiation factor SUI1 DJ564_RS04255 PF17810 Arginine decarboxylase helical bundle domain DJ564_RS04255 PF17944 Arginine decarboxylase C-terminal helical extension DJ564_RS04255 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DJ564_RS04260 PF04717 Type VI secretion system, phage-baseplate injector DJ564_RS04270 PF01554 MatE DJ564_RS04290 PF13847 Methyltransferase domain DJ564_RS04305 PF01575 MaoC like domain DJ564_RS04315 PF00108 Thiolase, N-terminal domain DJ564_RS04315 PF02803 Thiolase, C-terminal domain DJ564_RS04320 PF13593 SBF-like CPA transporter family (DUF4137) DJ564_RS04325 PF12833 Helix-turn-helix domain DJ564_RS04325 PF02311 AraC-like ligand binding domain DJ564_RS04330 PF00672 HAMP domain DJ564_RS04330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS04330 PF17200 Single Cache domain 2 DJ564_RS04340 PF09278 MerR, DNA binding DJ564_RS04340 PF00376 MerR family regulatory protein DJ564_RS04345 PF00403 Heavy-metal-associated domain DJ564_RS04360 PF07690 Major Facilitator Superfamily DJ564_RS04365 PF00107 Zinc-binding dehydrogenase DJ564_RS04365 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS04375 PF03466 LysR substrate binding domain DJ564_RS04375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS04385 PF00962 Adenosine/AMP deaminase DJ564_RS04390 PF14226 non-haem dioxygenase in morphine synthesis N-terminal DJ564_RS04390 PF03171 2OG-Fe(II) oxygenase superfamily DJ564_RS04395 PF02608 ABC transporter substrate-binding protein PnrA-like DJ564_RS04405 PF01699 Sodium/calcium exchanger protein DJ564_RS04415 PF01979 Amidohydrolase family DJ564_RS04430 PF13411 MerR HTH family regulatory protein DJ564_RS04440 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS04445 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS04450 PF00005 ABC transporter DJ564_RS04455 PF09186 Domain of unknown function (DUF1949) DJ564_RS04455 PF01205 Uncharacterized protein family UPF0029 DJ564_RS04460 PF08362 YcdC-like protein, C-terminal region DJ564_RS04460 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS04465 PF03466 LysR substrate binding domain DJ564_RS04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS04470 PF00202 Aminotransferase class-III DJ564_RS04475 PF00171 Aldehyde dehydrogenase family DJ564_RS04510 PF17946 RecC C-terminal domain DJ564_RS04515 PF00580 UvrD/REP helicase N-terminal domain DJ564_RS04515 PF13361 UvrD-like helicase C-terminal domain DJ564_RS04515 PF12705 PD-(D/E)XK nuclease superfamily DJ564_RS04520 PF13538 UvrD-like helicase C-terminal domain DJ564_RS04530 PF17152 Periplasmic sensor domain DJ564_RS04530 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS04540 PF03466 LysR substrate binding domain DJ564_RS04540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS04545 PF00171 Aldehyde dehydrogenase family DJ564_RS04550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ564_RS04550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ564_RS04560 PF00550 Phosphopantetheine attachment site DJ564_RS04565 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ564_RS04565 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ564_RS04575 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ564_RS04575 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ564_RS04585 PF00202 Aminotransferase class-III DJ564_RS04595 PF00106 short chain dehydrogenase DJ564_RS04615 PF13411 MerR HTH family regulatory protein DJ564_RS04620 PF02525 Flavodoxin-like fold DJ564_RS04625 PF03466 LysR substrate binding domain DJ564_RS04625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS04640 PF02525 Flavodoxin-like fold DJ564_RS04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS04645 PF03466 LysR substrate binding domain DJ564_RS04655 PF00916 Sulfate permease family DJ564_RS04655 PF01740 STAS domain DJ564_RS04660 PF02447 GntP family permease DJ564_RS04665 PF01380 SIS domain DJ564_RS04665 PF02685 Glucokinase DJ564_RS04665 PF01418 Helix-turn-helix domain, rpiR family DJ564_RS04670 PF07969 Amidohydrolase family DJ564_RS04685 PF01850 PIN domain DJ564_RS04690 PF00672 HAMP domain DJ564_RS04690 PF16591 Helical bimodular sensor domain DJ564_RS04690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS04710 PF13302 Acetyltransferase (GNAT) domain DJ564_RS04715 PF16736 Single Cache-like DJ564_RS04715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS04715 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS04715 PF00989 PAS fold DJ564_RS04720 PF06745 KaiC DJ564_RS04775 PF01370 NAD dependent epimerase/dehydratase family DJ564_RS04780 PF03537 Glycoside-hydrolase family GH114 DJ564_RS04805 PF13439 Glycosyltransferase Family 4 DJ564_RS04820 PF02566 OsmC-like protein DJ564_RS04855 PF02589 LUD domain DJ564_RS04860 PF11870 Domain of unknown function (DUF3390) DJ564_RS04860 PF13183 4Fe-4S dicluster domain DJ564_RS04860 PF02589 LUD domain DJ564_RS04865 PF02754 Cysteine-rich domain DJ564_RS04870 PF02652 L-lactate permease DJ564_RS04875 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS04875 PF07729 FCD domain DJ564_RS04880 PF01668 SmpB protein DJ564_RS04885 PF00209 Sodium:neurotransmitter symporter family DJ564_RS04890 PF03364 Polyketide cyclase / dehydrase and lipid transport DJ564_RS04895 PF03658 RnfH family Ubiquitin DJ564_RS04900 PF04355 SmpA / OmlA family DJ564_RS04905 PF01475 Ferric uptake regulator family DJ564_RS04910 PF02463 RecF/RecN/SMC N terminal domain DJ564_RS04920 PF01025 GrpE DJ564_RS04925 PF00012 Hsp70 protein DJ564_RS04930 PF01556 DnaJ C terminal domain DJ564_RS04930 PF00226 DnaJ domain DJ564_RS04930 PF00684 DnaJ central domain DJ564_RS04935 PF01113 Dihydrodipicolinate reductase, N-terminus DJ564_RS04935 PF05173 Dihydrodipicolinate reductase, C-terminus DJ564_RS04940 PF00117 Glutamine amidotransferase class-I DJ564_RS04940 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DJ564_RS04945 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJ564_RS04945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ564_RS04945 PF02142 MGS-like domain DJ564_RS04950 PF03449 Transcription elongation factor, N-terminal DJ564_RS04950 PF01272 Transcription elongation factor, GreA/GreB, C-term DJ564_RS04960 PF01985 CRS1 / YhbY (CRM) domain DJ564_RS04965 PF01728 FtsJ-like methyltransferase DJ564_RS04970 PF01434 Peptidase family M41 DJ564_RS04970 PF00004 ATPase family associated with various cellular activities (AAA) DJ564_RS04970 PF17862 AAA+ lid domain DJ564_RS04970 PF06480 FtsH Extracellular DJ564_RS04975 PF00809 Pterin binding enzyme DJ564_RS04980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJ564_RS04980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJ564_RS04980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJ564_RS04980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJ564_RS04985 PF00121 Triosephosphate isomerase DJ564_RS04990 PF03840 Preprotein translocase SecG subunit DJ564_RS05005 PF17384 RimP C-terminal SH3 domain DJ564_RS05005 PF02576 RimP N-terminal domain DJ564_RS05010 PF08529 NusA N-terminal domain DJ564_RS05010 PF00575 S1 RNA binding domain DJ564_RS05010 PF13184 NusA-like KH domain DJ564_RS05015 PF08364 Bacterial translation initiation factor IF-2 associated region DJ564_RS05015 PF04760 Translation initiation factor IF-2, N-terminal region DJ564_RS05015 PF11987 Translation-initiation factor 2 DJ564_RS05015 PF00009 Elongation factor Tu GTP binding domain DJ564_RS05020 PF02033 Ribosome-binding factor A DJ564_RS05025 PF09157 Pseudouridine synthase II TruB, C-terminal DJ564_RS05025 PF16198 tRNA pseudouridylate synthase B C-terminal domain DJ564_RS05025 PF01509 TruB family pseudouridylate synthase (N terminal domain) DJ564_RS05030 PF00312 Ribosomal protein S15 DJ564_RS05035 PF00575 S1 RNA binding domain DJ564_RS05035 PF03725 3' exoribonuclease family, domain 2 DJ564_RS05035 PF00013 KH domain DJ564_RS05035 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DJ564_RS05035 PF01138 3' exoribonuclease family, domain 1 DJ564_RS05055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DJ564_RS05055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DJ564_RS05065 PF01510 N-acetylmuramoyl-L-alanine amidase DJ564_RS05075 PF17200 Single Cache domain 2 DJ564_RS05075 PF00672 HAMP domain DJ564_RS05075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS05080 PF01026 TatD related DNase DJ564_RS05085 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ564_RS05085 PF00356 Bacterial regulatory proteins, lacI family DJ564_RS05090 PF05524 PEP-utilising enzyme, N-terminal DJ564_RS05090 PF00391 PEP-utilising enzyme, mobile domain DJ564_RS05090 PF02896 PEP-utilising enzyme, TIM barrel domain DJ564_RS05090 PF00381 PTS HPr component phosphorylation site DJ564_RS05090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJ564_RS05095 PF00294 pfkB family carbohydrate kinase DJ564_RS05100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ564_RS05100 PF02378 Phosphotransferase system, EIIC DJ564_RS05120 PF00258 Flavodoxin DJ564_RS05120 PF00175 Oxidoreductase NAD-binding domain DJ564_RS05120 PF00667 FAD binding domain DJ564_RS05125 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS05125 PF00593 TonB dependent receptor DJ564_RS05130 PF13640 2OG-Fe(II) oxygenase superfamily DJ564_RS05130 PF18331 PKHD-type hydroxylase C-terminal domain DJ564_RS05150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DJ564_RS05150 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DJ564_RS05160 PF00571 CBS domain DJ564_RS05160 PF00005 ABC transporter DJ564_RS05165 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS05170 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DJ564_RS05175 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS05180 PF00009 Elongation factor Tu GTP binding domain DJ564_RS05180 PF03144 Elongation factor Tu domain 2 DJ564_RS05180 PF16658 Class II release factor RF3, C-terminal domain DJ564_RS05190 PF00005 ABC transporter DJ564_RS05190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ564_RS05195 PF00005 ABC transporter DJ564_RS05195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ564_RS05200 PF12911 N-terminal TM domain of oligopeptide transport permease C DJ564_RS05200 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS05205 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS05210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ564_RS05215 PF03573 outer membrane porin, OprD family DJ564_RS05220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ564_RS05225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ564_RS05245 PF01063 Amino-transferase class IV DJ564_RS05260 PF00664 ABC transporter transmembrane region DJ564_RS05260 PF00005 ABC transporter DJ564_RS05260 PF03412 Peptidase C39 family DJ564_RS05270 PF02655 ATP-grasp domain DJ564_RS05270 PF00206 Lyase DJ564_RS05280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS05280 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS05285 PF00072 Response regulator receiver domain DJ564_RS05285 PF02954 Bacterial regulatory protein, Fis family DJ564_RS05290 PF06472 ABC transporter transmembrane region 2 DJ564_RS05290 PF00005 ABC transporter DJ564_RS05310 PF00701 Dihydrodipicolinate synthetase family DJ564_RS05315 PF00171 Aldehyde dehydrogenase family DJ564_RS05320 PF07690 Major Facilitator Superfamily DJ564_RS05325 PF08666 SAF domain DJ564_RS05325 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DJ564_RS05335 PF02627 Carboxymuconolactone decarboxylase family DJ564_RS05340 PF01699 Sodium/calcium exchanger protein DJ564_RS05345 PF03330 Lytic transglycolase DJ564_RS05350 PF02934 GatB/GatE catalytic domain DJ564_RS05350 PF02637 GatB domain DJ564_RS05355 PF01425 Amidase DJ564_RS05360 PF02686 Glu-tRNAGln amidotransferase C subunit DJ564_RS05370 PF04085 rod shape-determining protein MreC DJ564_RS05380 PF02545 Maf-like protein DJ564_RS05385 PF10150 Ribonuclease E/G family DJ564_RS05385 PF00575 S1 RNA binding domain DJ564_RS05395 PF00795 Carbon-nitrogen hydrolase DJ564_RS05400 PF01523 Putative modulator of DNA gyrase DJ564_RS05405 PF04751 Protein of unknown function (DUF615) DJ564_RS05410 PF01523 Putative modulator of DNA gyrase DJ564_RS05420 PF00206 Lyase DJ564_RS05420 PF10415 Fumarase C C-terminus DJ564_RS05430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJ564_RS05430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJ564_RS05435 PF02535 ZIP Zinc transporter DJ564_RS05440 PF00381 PTS HPr component phosphorylation site DJ564_RS05445 PF03668 P-loop ATPase protein family DJ564_RS05450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJ564_RS05455 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DJ564_RS05460 PF00309 Sigma-54 factor, Activator interacting domain (AID) DJ564_RS05460 PF04963 Sigma-54 factor, core binding domain DJ564_RS05460 PF04552 Sigma-54, DNA binding domain DJ564_RS05465 PF00005 ABC transporter DJ564_RS05465 PF12399 Branched-chain amino acid ATP-binding cassette transporter DJ564_RS05470 PF03968 OstA-like protein DJ564_RS05485 PF01380 SIS domain DJ564_RS05485 PF00571 CBS domain DJ564_RS05490 PF00005 ABC transporter DJ564_RS05495 PF02405 Permease MlaE DJ564_RS05500 PF02470 MlaD protein DJ564_RS05505 PF05494 MlaC protein DJ564_RS05520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ564_RS05525 PF01634 ATP phosphoribosyltransferase DJ564_RS05530 PF00815 Histidinol dehydrogenase DJ564_RS05535 PF00155 Aminotransferase class I and II DJ564_RS05545 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS05545 PF00593 TonB dependent receptor DJ564_RS05550 PF13180 PDZ domain DJ564_RS05555 PF01784 NIF3 (NGG1p interacting factor 3) DJ564_RS05565 PF01507 Phosphoadenosine phosphosulfate reductase family DJ564_RS05570 PF00009 Elongation factor Tu GTP binding domain DJ564_RS05575 PF01553 Acyltransferase DJ564_RS05580 PF01515 Phosphate acetyl/butaryl transferase DJ564_RS05580 PF07085 DRTGG domain DJ564_RS05590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJ564_RS05595 PF00255 Glutathione peroxidase DJ564_RS05600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ564_RS05600 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS05605 PF00534 Glycosyl transferases group 1 DJ564_RS05605 PF13439 Glycosyltransferase Family 4 DJ564_RS05620 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS05630 PF00202 Aminotransferase class-III DJ564_RS05645 PF02152 Dihydroneopterin aldolase DJ564_RS05650 PF01227 GTP cyclohydrolase I DJ564_RS05665 PF13411 MerR HTH family regulatory protein DJ564_RS05675 PF01740 STAS domain DJ564_RS05675 PF13426 PAS domain DJ564_RS05680 PF00258 Flavodoxin DJ564_RS05685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS05685 PF03466 LysR substrate binding domain DJ564_RS05690 PF03788 LrgA family DJ564_RS05695 PF04172 LrgB-like family DJ564_RS05700 PF00596 Class II Aldolase and Adducin N-terminal domain DJ564_RS05705 PF00561 alpha/beta hydrolase fold DJ564_RS05710 PF00106 short chain dehydrogenase DJ564_RS05715 PF01320 Colicin immunity protein / pyocin immunity protein DJ564_RS05720 PF06958 S-type Pyocin DJ564_RS05730 PF07044 Protein of unknown function (DUF1329) DJ564_RS05735 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS05735 PF00072 Response regulator receiver domain DJ564_RS05750 PF04209 homogentisate 1,2-dioxygenase DJ564_RS05755 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJ564_RS05760 PF13417 Glutathione S-transferase, N-terminal domain DJ564_RS05765 PF13369 Transglutaminase-like superfamily DJ564_RS05770 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DJ564_RS05770 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ564_RS05780 PF06146 Phosphate-starvation-inducible E DJ564_RS05795 PF03313 Serine dehydratase alpha chain DJ564_RS05795 PF03315 Serine dehydratase beta chain DJ564_RS05800 PF03466 LysR substrate binding domain DJ564_RS05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS05810 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS05810 PF00593 TonB dependent receptor DJ564_RS05810 PF07660 Secretin and TonB N terminus short domain DJ564_RS05815 PF16220 Domain of unknown function (DUF4880) DJ564_RS05815 PF04773 FecR protein DJ564_RS05820 PF04542 Sigma-70 region 2 DJ564_RS05820 PF08281 Sigma-70, region 4 DJ564_RS05850 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS05855 PF14525 AraC-binding-like domain DJ564_RS05855 PF12833 Helix-turn-helix domain DJ564_RS05860 PF00892 EamA-like transporter family DJ564_RS05870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ564_RS05870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ564_RS05895 PF03466 LysR substrate binding domain DJ564_RS05895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS05900 PF02321 Outer membrane efflux protein DJ564_RS05905 PF04632 Fusaric acid resistance protein family DJ564_RS05915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS05915 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS05930 PF00106 short chain dehydrogenase DJ564_RS05940 PF14431 YwqJ-like deaminase DJ564_RS05940 PF18807 Tripartite Tc toxins repeat DJ564_RS05945 PF01050 Mannose-6-phosphate isomerase DJ564_RS05945 PF00483 Nucleotidyl transferase DJ564_RS05950 PF11182 Alginate O-acetyl transferase AlgF DJ564_RS05955 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX DJ564_RS05960 PF03062 MBOAT, membrane-bound O-acyltransferase family DJ564_RS05965 PF05426 Alginate lyase DJ564_RS05970 PF16824 C-terminal carbohydrate-binding module DJ564_RS05970 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX DJ564_RS05975 PF05048 Periplasmic copper-binding protein (NosD) DJ564_RS05980 PF13372 Alginate export DJ564_RS05985 PF08238 Sel1 repeat DJ564_RS05990 PF07238 PilZ domain DJ564_RS06000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ564_RS06000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ564_RS06000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ564_RS06005 PF03883 Peroxide stress protein YaaA DJ564_RS06020 PF13638 PIN domain DJ564_RS06020 PF02562 PhoH-like protein DJ564_RS06025 PF01967 MoaC family DJ564_RS06030 PF02597 ThiS family DJ564_RS06035 PF02391 MoaE protein DJ564_RS06040 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS06045 PF08348 YheO-like PAS domain DJ564_RS06045 PF13309 HTH domain DJ564_RS06050 PF01266 FAD dependent oxidoreductase DJ564_RS06055 PF02423 Ornithine cyclodeaminase/mu-crystallin family DJ564_RS06060 PF00271 Helicase conserved C-terminal domain DJ564_RS06060 PF00270 DEAD/DEAH box helicase DJ564_RS06065 PF02230 Phospholipase/Carboxylesterase DJ564_RS06070 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS06075 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS06080 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS06085 PF00005 ABC transporter DJ564_RS06090 PF00082 Subtilase family DJ564_RS06090 PF01483 Proprotein convertase P-domain DJ564_RS06095 PF07729 FCD domain DJ564_RS06095 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS06100 PF07690 Major Facilitator Superfamily DJ564_RS06105 PF06551 Protein of unknown function (DUF1120) DJ564_RS06125 PF06551 Protein of unknown function (DUF1120) DJ564_RS06130 PF00577 Outer membrane usher protein DJ564_RS06130 PF13954 PapC N-terminal domain DJ564_RS06130 PF13953 PapC C-terminal domain DJ564_RS06135 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJ564_RS06150 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS06150 PF00072 Response regulator receiver domain DJ564_RS06160 PF01541 GIY-YIG catalytic domain DJ564_RS06175 PF04245 37-kD nucleoid-associated bacterial protein DJ564_RS06180 PF00216 Bacterial DNA-binding protein DJ564_RS06185 PF05971 RNA methyltransferase DJ564_RS06205 PF10458 Valyl tRNA synthetase tRNA binding arm DJ564_RS06205 PF00133 tRNA synthetases class I (I, L, M and V) DJ564_RS06205 PF08264 Anticodon-binding domain of tRNA DJ564_RS06220 PF04364 DNA polymerase III chi subunit, HolC DJ564_RS06225 PF02789 Cytosol aminopeptidase family, N-terminal domain DJ564_RS06225 PF00883 Cytosol aminopeptidase family, catalytic domain DJ564_RS06230 PF03739 Lipopolysaccharide export system permease LptF/LptG DJ564_RS06235 PF03739 Lipopolysaccharide export system permease LptF/LptG DJ564_RS06240 PF06421 GTP-binding protein LepA C-terminus DJ564_RS06240 PF03144 Elongation factor Tu domain 2 DJ564_RS06240 PF00009 Elongation factor Tu GTP binding domain DJ564_RS06240 PF00679 Elongation factor G C-terminus DJ564_RS06245 PF10502 Signal peptidase, peptidase S26 DJ564_RS06250 PF14622 Ribonuclease-III-like DJ564_RS06250 PF00035 Double-stranded RNA binding motif DJ564_RS06255 PF01926 50S ribosome-binding GTPase DJ564_RS06255 PF07650 KH domain DJ564_RS06265 PF11967 Recombination protein O N terminal DJ564_RS06265 PF02565 Recombination protein O C terminal DJ564_RS06270 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DJ564_RS06280 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS06280 PF01464 Transglycosylase SLT domain DJ564_RS06285 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DJ564_RS06285 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DJ564_RS06285 PF02769 AIR synthase related protein, C-terminal domain DJ564_RS06290 PF01784 NIF3 (NGG1p interacting factor 3) DJ564_RS06295 PF02378 Phosphotransferase system, EIIC DJ564_RS06295 PF00367 phosphotransferase system, EIIB DJ564_RS06295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJ564_RS06300 PF05524 PEP-utilising enzyme, N-terminal DJ564_RS06300 PF00391 PEP-utilising enzyme, mobile domain DJ564_RS06300 PF02896 PEP-utilising enzyme, TIM barrel domain DJ564_RS06300 PF00381 PTS HPr component phosphorylation site DJ564_RS06300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJ564_RS06305 PF01380 SIS domain DJ564_RS06310 PF01979 Amidohydrolase family DJ564_RS06315 PF07702 UTRA domain DJ564_RS06315 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS06325 PF09297 NADH pyrophosphatase zinc ribbon domain DJ564_RS06325 PF00293 NUDIX domain DJ564_RS06330 PF00293 NUDIX domain DJ564_RS06335 PF00132 Bacterial transferase hexapeptide (six repeats) DJ564_RS06350 PF02222 ATP-grasp domain DJ564_RS06355 PF07690 Major Facilitator Superfamily DJ564_RS06355 PF00083 Sugar (and other) transporter DJ564_RS06360 PF01595 Cyclin M transmembrane N-terminal domain DJ564_RS06360 PF03471 Transporter associated domain DJ564_RS06360 PF00571 CBS domain DJ564_RS06370 PF02978 Signal peptide binding domain DJ564_RS06370 PF00448 SRP54-type protein, GTPase domain DJ564_RS06370 PF02881 SRP54-type protein, helical bundle domain DJ564_RS06375 PF00886 Ribosomal protein S16 DJ564_RS06380 PF01782 RimM N-terminal domain DJ564_RS06380 PF05239 PRC-barrel domain DJ564_RS06385 PF01746 tRNA (Guanine-1)-methyltransferase DJ564_RS06390 PF01245 Ribosomal protein L19 DJ564_RS06395 PF00589 Phage integrase family DJ564_RS06395 PF02899 Phage integrase, N-terminal SAM-like domain DJ564_RS06400 PF13098 Thioredoxin-like domain DJ564_RS06400 PF10411 Disulfide bond isomerase protein N-terminus DJ564_RS06405 PF01842 ACT domain DJ564_RS06405 PF03447 Homoserine dehydrogenase, NAD binding domain DJ564_RS06405 PF00742 Homoserine dehydrogenase DJ564_RS06410 PF14821 Threonine synthase N terminus DJ564_RS06410 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS06415 PF01627 Hpt domain DJ564_RS06415 PF00072 Response regulator receiver domain DJ564_RS06415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS06415 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS06415 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS06415 PF00989 PAS fold DJ564_RS06430 PF02515 CoA-transferase family III DJ564_RS06435 PF07152 YaeQ protein DJ564_RS06440 PF02272 DHHA1 domain DJ564_RS06440 PF17768 RecJ OB domain DJ564_RS06440 PF01368 DHH family DJ564_RS06445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ564_RS06450 PF04349 Periplasmic glucan biosynthesis protein, MdoG DJ564_RS06475 PF00171 Aldehyde dehydrogenase family DJ564_RS06480 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS06485 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS06490 PF08402 TOBE domain DJ564_RS06490 PF00005 ABC transporter DJ564_RS06495 PF13416 Bacterial extracellular solute-binding protein DJ564_RS06500 PF00171 Aldehyde dehydrogenase family DJ564_RS06505 PF03466 LysR substrate binding domain DJ564_RS06505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS06515 PF12729 Four helix bundle sensory module for signal transduction DJ564_RS06515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS06515 PF00672 HAMP domain DJ564_RS06525 PF01739 CheR methyltransferase, SAM binding domain DJ564_RS06535 PF01584 CheW-like domain DJ564_RS06535 PF00072 Response regulator receiver domain DJ564_RS06535 PF01627 Hpt domain DJ564_RS06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS06540 PF01339 CheB methylesterase DJ564_RS06540 PF00072 Response regulator receiver domain DJ564_RS06545 PF01590 GAF domain DJ564_RS06545 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS06545 PF00360 Phytochrome region DJ564_RS06545 PF00563 EAL domain DJ564_RS06555 PF00152 tRNA synthetases class II (D, K and N) DJ564_RS06555 PF01336 OB-fold nucleic acid binding domain DJ564_RS06580 PF12146 Serine aminopeptidase, S33 DJ564_RS06595 PF00691 OmpA family DJ564_RS06595 PF18393 MotY N-terminal domain DJ564_RS06615 PF00311 Phosphoenolpyruvate carboxylase DJ564_RS06620 PF05191 Adenylate kinase, active site lid DJ564_RS06625 PF00814 Glycoprotease family DJ564_RS06635 PF01904 Protein of unknown function DUF72 DJ564_RS06655 PF04445 Putative SAM-dependent methyltransferase DJ564_RS06665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS06670 PF00873 AcrB/AcrD/AcrF family DJ564_RS06705 PF01553 Acyltransferase DJ564_RS06710 PF00313 'Cold-shock' DNA-binding domain DJ564_RS06725 PF13847 Methyltransferase domain DJ564_RS06730 PF01546 Peptidase family M20/M25/M40 DJ564_RS06730 PF07687 Peptidase dimerisation domain DJ564_RS06735 PF00535 Glycosyl transferase family 2 DJ564_RS06740 PF00899 ThiF family DJ564_RS06745 PF02657 Fe-S metabolism associated domain DJ564_RS06750 PF00266 Aminotransferase class-V DJ564_RS06755 PF14602 Hexapeptide repeat of succinyl-transferase DJ564_RS06755 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle DJ564_RS06760 PF03960 ArsC family DJ564_RS06775 PF00155 Aminotransferase class I and II DJ564_RS06780 PF01909 Nucleotidyltransferase domain DJ564_RS06780 PF01966 HD domain DJ564_RS06780 PF08335 GlnD PII-uridylyltransferase DJ564_RS06780 PF01842 ACT domain DJ564_RS06785 PF00557 Metallopeptidase family M24 DJ564_RS06790 PF00318 Ribosomal protein S2 DJ564_RS06795 PF00889 Elongation factor TS DJ564_RS06800 PF00696 Amino acid kinase family DJ564_RS06805 PF01765 Ribosome recycling factor DJ564_RS06810 PF01255 Putative undecaprenyl diphosphate synthase DJ564_RS06820 PF13288 DXP reductoisomerase C-terminal domain DJ564_RS06820 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DJ564_RS06820 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DJ564_RS06825 PF13180 PDZ domain DJ564_RS06825 PF17820 PDZ domain DJ564_RS06825 PF02163 Peptidase family M50 DJ564_RS06830 PF07244 Surface antigen variable number repeat DJ564_RS06830 PF01103 Surface antigen DJ564_RS06835 PF03938 Outer membrane protein (OmpH-like) DJ564_RS06840 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DJ564_RS06840 PF00132 Bacterial transferase hexapeptide (six repeats) DJ564_RS06845 PF07977 FabA-like domain DJ564_RS06850 PF00132 Bacterial transferase hexapeptide (six repeats) DJ564_RS06850 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DJ564_RS06855 PF02684 Lipid-A-disaccharide synthetase DJ564_RS06860 PF01351 Ribonuclease HII DJ564_RS06865 PF01336 OB-fold nucleic acid binding domain DJ564_RS06865 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ564_RS06865 PF14579 Helix-hairpin-helix motif DJ564_RS06865 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ564_RS06865 PF02811 PHP domain DJ564_RS06870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DJ564_RS06875 PF01171 PP-loop family DJ564_RS06875 PF11734 TilS substrate C-terminal domain DJ564_RS06875 PF09179 TilS substrate binding domain DJ564_RS06880 PF00117 Glutamine amidotransferase class-I DJ564_RS06880 PF06418 CTP synthase N-terminus DJ564_RS06885 PF00793 DAHP synthetase I family DJ564_RS06890 PF03952 Enolase, N-terminal domain DJ564_RS06890 PF00113 Enolase, C-terminal TIM barrel domain DJ564_RS06895 PF04977 Septum formation initiator DJ564_RS06900 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DJ564_RS06905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS06905 PF03466 LysR substrate binding domain DJ564_RS06910 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS06910 PF00107 Zinc-binding dehydrogenase DJ564_RS06915 PF00756 Putative esterase DJ564_RS06920 PF02542 YgbB family DJ564_RS06925 PF01142 tRNA pseudouridine synthase D (TruD) DJ564_RS06930 PF01975 Survival protein SurE DJ564_RS06940 PF01476 LysM domain DJ564_RS06940 PF01551 Peptidase family M23 DJ564_RS06945 PF04539 Sigma-70 region 3 DJ564_RS06945 PF00140 Sigma-70 factor, region 1.2 DJ564_RS06945 PF04542 Sigma-70 region 2 DJ564_RS06945 PF04545 Sigma-70, region 4 DJ564_RS06950 PF11953 Domain of unknown function (DUF3470) DJ564_RS06950 PF00037 4Fe-4S binding domain DJ564_RS06955 PF05192 MutS domain III DJ564_RS06955 PF00488 MutS domain V DJ564_RS06955 PF05190 MutS family domain IV DJ564_RS06955 PF05188 MutS domain II DJ564_RS06955 PF01624 MutS domain I DJ564_RS06960 PF01381 Helix-turn-helix DJ564_RS06960 PF00717 Peptidase S24-like DJ564_RS06980 PF17482 Phage tail sheath C-terminal domain DJ564_RS06980 PF04984 Phage tail sheath protein subtilisin-like domain DJ564_RS07020 PF07409 Phage protein GP46 DJ564_RS07055 PF00182 Chitinase class I DJ564_RS07065 PF02464 Competence-damaged protein DJ564_RS07070 PF00154 recA bacterial DNA recombination protein DJ564_RS07075 PF02631 RecX family DJ564_RS07095 PF03942 DTW domain DJ564_RS07100 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS07100 PF00072 Response regulator receiver domain DJ564_RS07105 PF01219 Prokaryotic diacylglycerol kinase DJ564_RS07110 PF03466 LysR substrate binding domain DJ564_RS07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS07115 PF00970 Oxidoreductase FAD-binding domain DJ564_RS07115 PF00175 Oxidoreductase NAD-binding domain DJ564_RS07120 PF18389 TrmO C-terminal domain DJ564_RS07120 PF01980 tRNA-methyltransferase O DJ564_RS07130 PF07308 Protein of unknown function (DUF1456) DJ564_RS07135 PF00849 RNA pseudouridylate synthase DJ564_RS07135 PF01479 S4 domain DJ564_RS07140 PF13673 Acetyltransferase (GNAT) domain DJ564_RS07145 PF18693 TRAM domain DJ564_RS07145 PF00919 Uncharacterized protein family UPF0004 DJ564_RS07145 PF04055 Radical SAM superfamily DJ564_RS07150 PF02705 K+ potassium transporter DJ564_RS07170 PF03706 Lysylphosphatidylglycerol synthase TM region DJ564_RS07170 PF09924 Uncharacterised conserved protein (DUF2156) DJ564_RS07185 PF11798 IMS family HHH motif DJ564_RS07185 PF00817 impB/mucB/samB family DJ564_RS07195 PF03129 Anticodon binding domain DJ564_RS07195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ564_RS07195 PF04073 Aminoacyl-tRNA editing domain DJ564_RS07200 PF07690 Major Facilitator Superfamily DJ564_RS07220 PF00313 'Cold-shock' DNA-binding domain DJ564_RS07225 PF00692 dUTPase DJ564_RS07240 PF00270 DEAD/DEAH box helicase DJ564_RS07240 PF08494 DEAD/H associated DJ564_RS07240 PF00271 Helicase conserved C-terminal domain DJ564_RS07245 PF00005 ABC transporter DJ564_RS07255 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS07260 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS07265 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS07270 PF04679 ATP dependent DNA ligase C terminal region DJ564_RS07270 PF04675 DNA ligase N terminus DJ564_RS07270 PF01068 ATP dependent DNA ligase domain DJ564_RS07280 PF01804 Penicillin amidase DJ564_RS07290 PF00857 Isochorismatase family DJ564_RS07295 PF07517 SecA DEAD-like domain DJ564_RS07295 PF07516 SecA Wing and Scaffold domain DJ564_RS07295 PF01043 SecA preprotein cross-linking domain DJ564_RS07295 PF02810 SEC-C motif DJ564_RS07305 PF02810 SEC-C motif DJ564_RS07315 PF05736 OprF membrane domain DJ564_RS07315 PF00691 OmpA family DJ564_RS07320 PF00691 OmpA family DJ564_RS07320 PF05736 OprF membrane domain DJ564_RS07340 PF13307 Helicase C-terminal domain DJ564_RS07340 PF06733 DEAD_2 DJ564_RS07345 PF02449 Beta-galactosidase DJ564_RS07345 PF17992 Agarase CBM like domain DJ564_RS07350 PF00144 Beta-lactamase DJ564_RS07355 PF13488 Glycine zipper DJ564_RS07355 PF00691 OmpA family DJ564_RS07360 PF01243 Pyridoxamine 5'-phosphate oxidase DJ564_RS07360 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DJ564_RS07390 PF06965 Na+/H+ antiporter 1 DJ564_RS07395 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS07420 PF03466 LysR substrate binding domain DJ564_RS07420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS07435 PF05114 Protein of unknown function (DUF692) DJ564_RS07445 PF00005 ABC transporter DJ564_RS07450 PF00005 ABC transporter DJ564_RS07450 PF12399 Branched-chain amino acid ATP-binding cassette transporter DJ564_RS07455 PF11862 Domain of unknown function (DUF3382) DJ564_RS07455 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS07460 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS07465 PF13458 Periplasmic binding protein DJ564_RS07480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ564_RS07480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ564_RS07485 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS07485 PF00563 EAL domain DJ564_RS07485 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS07490 PF03692 Putative zinc- or iron-chelating domain DJ564_RS07495 PF07690 Major Facilitator Superfamily DJ564_RS07500 PF00176 SNF2 family N-terminal domain DJ564_RS07500 PF18339 RapA N-terminal Tudor like domain 1 DJ564_RS07500 PF18337 RapA N-terminal Tudor like domain DJ564_RS07500 PF12137 RNA polymerase recycling family C-terminal DJ564_RS07500 PF00271 Helicase conserved C-terminal domain DJ564_RS07510 PF01384 Phosphate transporter family DJ564_RS07520 PF01614 Bacterial transcriptional regulator DJ564_RS07520 PF09339 IclR helix-turn-helix domain DJ564_RS07525 PF07690 Major Facilitator Superfamily DJ564_RS07530 PF01144 Coenzyme A transferase DJ564_RS07535 PF01144 Coenzyme A transferase DJ564_RS07540 PF02803 Thiolase, C-terminal domain DJ564_RS07540 PF00108 Thiolase, N-terminal domain DJ564_RS07545 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DJ564_RS07545 PF00775 Dioxygenase DJ564_RS07550 PF00775 Dioxygenase DJ564_RS07555 PF00083 Sugar (and other) transporter DJ564_RS07560 PF10397 Adenylosuccinate lyase C-terminus DJ564_RS07560 PF00206 Lyase DJ564_RS07565 PF12146 Serine aminopeptidase, S33 DJ564_RS07570 PF02627 Carboxymuconolactone decarboxylase family DJ564_RS07575 PF13649 Methyltransferase domain DJ564_RS07580 PF03573 outer membrane porin, OprD family DJ564_RS07585 PF02321 Outer membrane efflux protein DJ564_RS07590 PF00873 AcrB/AcrD/AcrF family DJ564_RS07595 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS07595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS07600 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS07600 PF08361 MAATS-type transcriptional repressor, C-terminal region DJ564_RS07610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ564_RS07615 PF07690 Major Facilitator Superfamily DJ564_RS07660 PF13396 Phospholipase_D-nuclease N-terminal DJ564_RS07660 PF13091 PLD-like domain DJ564_RS07670 PF14310 Fibronectin type III-like domain DJ564_RS07670 PF01915 Glycosyl hydrolase family 3 C-terminal domain DJ564_RS07670 PF00933 Glycosyl hydrolase family 3 N terminal domain DJ564_RS07675 PF04011 LemA family DJ564_RS07680 PF04536 TPM domain DJ564_RS07695 PF00892 EamA-like transporter family DJ564_RS07700 PF01965 DJ-1/PfpI family DJ564_RS07710 PF07411 Domain of unknown function (DUF1508) DJ564_RS07715 PF00701 Dihydrodipicolinate synthetase family DJ564_RS07720 PF00596 Class II Aldolase and Adducin N-terminal domain DJ564_RS07725 PF08671 Anti-repressor SinI DJ564_RS07725 PF01381 Helix-turn-helix DJ564_RS07735 PF00465 Iron-containing alcohol dehydrogenase DJ564_RS07740 PF07690 Major Facilitator Superfamily DJ564_RS07750 PF03466 LysR substrate binding domain DJ564_RS07750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS07755 PF02515 CoA-transferase family III DJ564_RS07760 PF00682 HMGL-like DJ564_RS07770 PF07690 Major Facilitator Superfamily DJ564_RS07780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS07780 PF03466 LysR substrate binding domain DJ564_RS07785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ564_RS07795 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS07795 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS07795 PF00563 EAL domain DJ564_RS07830 PF13649 Methyltransferase domain DJ564_RS07835 PF08241 Methyltransferase domain DJ564_RS07885 PF00561 alpha/beta hydrolase fold DJ564_RS07890 PF00849 RNA pseudouridylate synthase DJ564_RS07890 PF01479 S4 domain DJ564_RS07900 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS07905 PF01425 Amidase DJ564_RS07910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ564_RS07910 PF00289 Biotin carboxylase, N-terminal domain DJ564_RS07910 PF02785 Biotin carboxylase C-terminal domain DJ564_RS07920 PF09347 Domain of unknown function (DUF1989) DJ564_RS07930 PF08402 TOBE domain DJ564_RS07930 PF00005 ABC transporter DJ564_RS07965 PF03167 Uracil DNA glycosylase superfamily DJ564_RS07970 PF05145 Transition state regulatory protein AbrB DJ564_RS07975 PF01970 Tripartite tricarboxylate transporter TctA family DJ564_RS07990 PF00072 Response regulator receiver domain DJ564_RS07990 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS07995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS07995 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS08005 PF01571 Aminomethyltransferase folate-binding domain DJ564_RS08010 PF03937 Flavinator of succinate dehydrogenase DJ564_RS08020 PF00890 FAD binding domain DJ564_RS08020 PF02910 Fumarate reductase flavoprotein C-term DJ564_RS08025 PF04542 Sigma-70 region 2 DJ564_RS08025 PF08281 Sigma-70, region 4 DJ564_RS08030 PF03872 Anti sigma-E protein RseA, N-terminal domain DJ564_RS08030 PF03873 Anti sigma-E protein RseA, C-terminal domain DJ564_RS08035 PF03888 MucB/RseB N-terminal domain DJ564_RS08035 PF17188 MucB/RseB C-terminal domain DJ564_RS08040 PF13180 PDZ domain DJ564_RS08045 PF01435 Peptidase family M48 DJ564_RS08050 PF01206 Sulfurtransferase TusA DJ564_RS08055 PF01594 AI-2E family transporter DJ564_RS08060 PF00578 AhpC/TSA family DJ564_RS08075 PF00701 Dihydrodipicolinate synthetase family DJ564_RS08080 PF06804 NlpB/DapX lipoprotein DJ564_RS08085 PF00753 Metallo-beta-lactamase superfamily DJ564_RS08090 PF01259 SAICAR synthetase DJ564_RS08135 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS08135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ564_RS08145 PF00596 Class II Aldolase and Adducin N-terminal domain DJ564_RS08150 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS08150 PF13977 BetI-type transcriptional repressor, C-terminal DJ564_RS08155 PF00072 Response regulator receiver domain DJ564_RS08155 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS08165 PF00072 Response regulator receiver domain DJ564_RS08165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS08165 PF01627 Hpt domain DJ564_RS08165 PF17149 Periplasmic sensor domain found in signal transduction proteins DJ564_RS08165 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS08165 PF00672 HAMP domain DJ564_RS08170 PF00324 Amino acid permease DJ564_RS08180 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS08185 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS08185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS08185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS08195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ564_RS08195 PF00205 Thiamine pyrophosphate enzyme, central domain DJ564_RS08195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ564_RS08200 PF00155 Aminotransferase class I and II DJ564_RS08205 PF00171 Aldehyde dehydrogenase family DJ564_RS08210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ564_RS08215 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS08220 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS08220 PF12911 N-terminal TM domain of oligopeptide transport permease C DJ564_RS08225 PF00005 ABC transporter DJ564_RS08225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ564_RS08230 PF02525 Flavodoxin-like fold DJ564_RS08235 PF07411 Domain of unknown function (DUF1508) DJ564_RS08240 PF00535 Glycosyl transferase family 2 DJ564_RS08260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS08260 PF03466 LysR substrate binding domain DJ564_RS08275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS08275 PF03466 LysR substrate binding domain DJ564_RS08280 PF07690 Major Facilitator Superfamily DJ564_RS08290 PF00120 Glutamine synthetase, catalytic domain DJ564_RS08295 PF08019 Phosphoethanolamine transferase EptA/EptB DJ564_RS08295 PF00884 Sulfatase DJ564_RS08305 PF00570 HRDC domain DJ564_RS08305 PF01612 3'-5' exonuclease DJ564_RS08310 PF05166 YcgL domain DJ564_RS08315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ564_RS08325 PF03692 Putative zinc- or iron-chelating domain DJ564_RS08345 PF01844 HNH endonuclease DJ564_RS08365 PF00326 Prolyl oligopeptidase family DJ564_RS08365 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain DJ564_RS08375 PF13230 Glutamine amidotransferases class-II DJ564_RS08390 PF03466 LysR substrate binding domain DJ564_RS08390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS08395 PF07690 Major Facilitator Superfamily DJ564_RS08400 PF03746 LamB/YcsF family DJ564_RS08405 PF02682 Carboxyltransferase domain, subdomain C and D DJ564_RS08410 PF02626 Carboxyltransferase domain, subdomain A and B DJ564_RS08420 PF00004 ATPase family associated with various cellular activities (AAA) DJ564_RS08420 PF10431 C-terminal, D2-small domain, of ClpB protein DJ564_RS08420 PF17871 AAA lid domain DJ564_RS08420 PF02861 Clp amino terminal domain, pathogenicity island component DJ564_RS08420 PF07724 AAA domain (Cdc48 subfamily) DJ564_RS08440 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS08455 PF03466 LysR substrate binding domain DJ564_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS08460 PF01970 Tripartite tricarboxylate transporter TctA family DJ564_RS08475 PF07690 Major Facilitator Superfamily DJ564_RS08480 PF04909 Amidohydrolase DJ564_RS08485 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DJ564_RS08490 PF13378 Enolase C-terminal domain-like DJ564_RS08490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ564_RS08500 PF00171 Aldehyde dehydrogenase family DJ564_RS08510 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DJ564_RS08520 PF11898 Domain of unknown function (DUF3418) DJ564_RS08520 PF00270 DEAD/DEAH box helicase DJ564_RS08520 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DJ564_RS08520 PF00271 Helicase conserved C-terminal domain DJ564_RS08520 PF04408 Helicase associated domain (HA2) DJ564_RS08530 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ564_RS08530 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ564_RS08555 PF00230 Major intrinsic protein DJ564_RS08565 PF00664 ABC transporter transmembrane region DJ564_RS08565 PF00005 ABC transporter DJ564_RS08570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DJ564_RS08575 PF00561 alpha/beta hydrolase fold DJ564_RS08590 PF02525 Flavodoxin-like fold DJ564_RS08600 PF00892 EamA-like transporter family DJ564_RS08605 PF00924 Mechanosensitive ion channel DJ564_RS08610 PF00270 DEAD/DEAH box helicase DJ564_RS08610 PF00271 Helicase conserved C-terminal domain DJ564_RS08630 PF17287 POTRA domain DJ564_RS08630 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DJ564_RS08630 PF08479 POTRA domain, ShlB-type DJ564_RS08640 PF18228 CdiI N-terminal domain DJ564_RS08680 PF13509 S1 domain DJ564_RS08680 PF17783 CvfB-like winged helix domain DJ564_RS08690 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DJ564_RS08700 PF00892 EamA-like transporter family DJ564_RS08710 PF03466 LysR substrate binding domain DJ564_RS08710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS08720 PF00753 Metallo-beta-lactamase superfamily DJ564_RS08720 PF16123 Hydroxyacylglutathione hydrolase C-terminus DJ564_RS08725 PF00474 Sodium:solute symporter family DJ564_RS08740 PF00491 Arginase family DJ564_RS08745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS08745 PF03466 LysR substrate binding domain DJ564_RS08755 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS08755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS08760 PF00664 ABC transporter transmembrane region DJ564_RS08760 PF00005 ABC transporter DJ564_RS08760 PF03412 Peptidase C39 family DJ564_RS08765 PF02321 Outer membrane efflux protein DJ564_RS08810 PF12792 CSS motif domain associated with EAL DJ564_RS08810 PF00563 EAL domain DJ564_RS08820 PF04304 Protein of unknown function (DUF454) DJ564_RS08835 PF00271 Helicase conserved C-terminal domain DJ564_RS08835 PF00270 DEAD/DEAH box helicase DJ564_RS08835 PF09382 RQC domain DJ564_RS08835 PF16124 RecQ zinc-binding DJ564_RS08835 PF00570 HRDC domain DJ564_RS08880 PF12833 Helix-turn-helix domain DJ564_RS08880 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DJ564_RS08885 PF02386 Cation transport protein DJ564_RS08890 PF00881 Nitroreductase family DJ564_RS08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS08895 PF08521 Two-component sensor kinase N-terminal DJ564_RS08895 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS08910 PF00072 Response regulator receiver domain DJ564_RS08910 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS08920 PF03795 YCII-related domain DJ564_RS08925 PF04279 Intracellular septation protein A DJ564_RS08930 PF02811 PHP domain DJ564_RS08935 PF01300 Telomere recombination DJ564_RS08940 PF02616 Segregation and condensation protein ScpA DJ564_RS08945 PF04079 Segregation and condensation complex subunit ScpB DJ564_RS08955 PF00849 RNA pseudouridylate synthase DJ564_RS08955 PF01479 S4 domain DJ564_RS08970 PF00324 Amino acid permease DJ564_RS08975 PF00472 RF-1 domain DJ564_RS08980 PF07690 Major Facilitator Superfamily DJ564_RS08990 PF00155 Aminotransferase class I and II DJ564_RS08995 PF01329 Pterin 4 alpha carbinolamine dehydratase DJ564_RS09000 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DJ564_RS09005 PF00158 Sigma-54 interaction domain DJ564_RS09005 PF18024 Helix-turn-helix domain DJ564_RS09015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ564_RS09015 PF00460 Flagella basal body rod protein DJ564_RS09020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ564_RS09020 PF00460 Flagella basal body rod protein DJ564_RS09025 PF02107 Flagellar L-ring protein DJ564_RS09030 PF02119 Flagellar P-ring protein DJ564_RS09035 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DJ564_RS09035 PF10135 Rod binding protein DJ564_RS09040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ564_RS09040 PF00460 Flagella basal body rod protein DJ564_RS09050 PF00535 Glycosyl transferase family 2 DJ564_RS09065 PF00483 Nucleotidyl transferase DJ564_RS09070 PF16363 GDP-mannose 4,6 dehydratase DJ564_RS09075 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DJ564_RS09080 PF08421 Putative zinc binding domain DJ564_RS09080 PF08484 C-methyltransferase C-terminal domain DJ564_RS09085 PF01370 NAD dependent epimerase/dehydratase family DJ564_RS09095 PF04989 Cephalosporin hydroxylase DJ564_RS09100 PF00535 Glycosyl transferase family 2 DJ564_RS09105 PF02719 Polysaccharide biosynthesis protein DJ564_RS09110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ564_RS09115 PF02348 Cytidylyltransferase DJ564_RS09125 PF08666 SAF domain DJ564_RS09125 PF03102 NeuB family DJ564_RS09130 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ564_RS09130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ564_RS09145 PF00700 Bacterial flagellin C-terminal helical region DJ564_RS09145 PF00669 Bacterial flagellin N-terminal helical region DJ564_RS09145 PF07196 Flagellin hook IN motif DJ564_RS09150 PF03646 FlaG protein DJ564_RS09155 PF02465 Flagellar hook-associated protein 2 N-terminus DJ564_RS09155 PF07195 Flagellar hook-associated protein 2 C-terminus DJ564_RS09155 PF07196 Flagellin hook IN motif DJ564_RS09160 PF02561 Flagellar protein FliS DJ564_RS09170 PF02954 Bacterial regulatory protein, Fis family DJ564_RS09170 PF06490 Flagellar regulatory protein FleQ DJ564_RS09170 PF00158 Sigma-54 interaction domain DJ564_RS09175 PF13188 PAS domain DJ564_RS09175 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS09175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS09180 PF00072 Response regulator receiver domain DJ564_RS09180 PF00158 Sigma-54 interaction domain DJ564_RS09180 PF02954 Bacterial regulatory protein, Fis family DJ564_RS09190 PF02049 Flagellar hook-basal body complex protein FliE DJ564_RS09195 PF01514 Secretory protein of YscJ/FliF family DJ564_RS09195 PF08345 Flagellar M-ring protein C-terminal DJ564_RS09200 PF14842 FliG N-terminal domain DJ564_RS09200 PF14841 FliG middle domain DJ564_RS09200 PF01706 FliG C-terminal domain DJ564_RS09210 PF18269 T3SS EscN ATPase C-terminal domain DJ564_RS09210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ564_RS09220 PF13466 STAS domain DJ564_RS09225 PF00072 Response regulator receiver domain DJ564_RS09225 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS09240 PF03748 Flagellar basal body-associated protein FliL DJ564_RS09245 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJ564_RS09245 PF02154 Flagellar motor switch protein FliM DJ564_RS09250 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DJ564_RS09255 PF04347 Flagellar biosynthesis protein, FliO DJ564_RS09260 PF00813 FliP family DJ564_RS09265 PF01313 Bacterial export proteins, family 3 DJ564_RS09270 PF01311 Bacterial export proteins, family 1 DJ564_RS09275 PF01312 FlhB HrpN YscU SpaS Family DJ564_RS09280 PF00771 FHIPEP family DJ564_RS09285 PF00448 SRP54-type protein, GTPase domain DJ564_RS09290 PF10609 NUBPL iron-transfer P-loop NTPase DJ564_RS09295 PF04542 Sigma-70 region 2 DJ564_RS09295 PF04539 Sigma-70 region 3 DJ564_RS09295 PF04545 Sigma-70, region 4 DJ564_RS09300 PF00072 Response regulator receiver domain DJ564_RS09305 PF04344 Chemotaxis phosphatase, CheZ DJ564_RS09310 PF01584 CheW-like domain DJ564_RS09310 PF00072 Response regulator receiver domain DJ564_RS09310 PF01627 Hpt domain DJ564_RS09310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS09310 PF02895 Signal transducing histidine kinase, homodimeric domain DJ564_RS09315 PF00072 Response regulator receiver domain DJ564_RS09315 PF01339 CheB methylesterase DJ564_RS09320 PF01618 MotA/TolQ/ExbB proton channel family DJ564_RS09325 PF00691 OmpA family DJ564_RS09325 PF13677 Membrane MotB of proton-channel complex MotA/MotB DJ564_RS09330 PF13614 AAA domain DJ564_RS09340 PF01584 CheW-like domain DJ564_RS09350 PF01312 FlhB HrpN YscU SpaS Family DJ564_RS09360 PF00005 ABC transporter DJ564_RS09365 PF03379 CcmB protein DJ564_RS09370 PF01578 Cytochrome C assembly protein DJ564_RS09375 PF04995 Heme exporter protein D (CcmD) DJ564_RS09380 PF03100 CcmE DJ564_RS09385 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DJ564_RS09385 PF01578 Cytochrome C assembly protein DJ564_RS09390 PF08534 Redoxin DJ564_RS09395 PF03918 Cytochrome C biogenesis protein DJ564_RS09415 PF07690 Major Facilitator Superfamily DJ564_RS09430 PF00520 Ion transport protein DJ564_RS09430 PF00027 Cyclic nucleotide-binding domain DJ564_RS09435 PF03253 Urea transporter DJ564_RS09440 PF00224 Pyruvate kinase, barrel domain DJ564_RS09440 PF02887 Pyruvate kinase, alpha/beta domain DJ564_RS09445 PF05161 MOFRL family DJ564_RS09445 PF13660 Domain of unknown function (DUF4147) DJ564_RS09450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ564_RS09450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ564_RS09455 PF01261 Xylose isomerase-like TIM barrel DJ564_RS09465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ564_RS09465 PF00205 Thiamine pyrophosphate enzyme, central domain DJ564_RS09465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ564_RS09480 PF08362 YcdC-like protein, C-terminal region DJ564_RS09480 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS09485 PF05661 Protein of unknown function (DUF808) DJ564_RS09490 PF04333 MlaA lipoprotein DJ564_RS09515 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DJ564_RS09520 PF04341 Protein of unknown function, DUF485 DJ564_RS09525 PF00474 Sodium:solute symporter family DJ564_RS09540 PF00285 Citrate synthase, C-terminal domain DJ564_RS09545 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DJ564_RS09550 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DJ564_RS09555 PF00890 FAD binding domain DJ564_RS09555 PF02910 Fumarate reductase flavoprotein C-term DJ564_RS09560 PF13085 2Fe-2S iron-sulfur cluster binding domain DJ564_RS09565 PF16078 2-oxoglutarate dehydrogenase N-terminus DJ564_RS09565 PF00676 Dehydrogenase E1 component DJ564_RS09565 PF02779 Transketolase, pyrimidine binding domain DJ564_RS09565 PF16870 2-oxoglutarate dehydrogenase C-terminal DJ564_RS09570 PF02817 e3 binding domain DJ564_RS09570 PF00364 Biotin-requiring enzyme DJ564_RS09570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ564_RS09575 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS09575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ564_RS09580 PF00549 CoA-ligase DJ564_RS09580 PF08442 ATP-grasp domain DJ564_RS09585 PF02629 CoA binding domain DJ564_RS09585 PF00549 CoA-ligase DJ564_RS09590 PF05525 Branched-chain amino acid transport protein DJ564_RS09620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS09620 PF00183 Hsp90 protein DJ564_RS09630 PF02678 Pirin DJ564_RS09630 PF05726 Pirin C-terminal cupin domain DJ564_RS09645 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS09645 PF00571 CBS domain DJ564_RS09650 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ564_RS09660 PF00551 Formyl transferase DJ564_RS09665 PF02769 AIR synthase related protein, C-terminal domain DJ564_RS09665 PF00586 AIR synthase related protein, N-terminal domain DJ564_RS09675 PF01594 AI-2E family transporter DJ564_RS09680 PF00308 Bacterial dnaA protein DJ564_RS09685 PF00877 NlpC/P60 family DJ564_RS09690 PF00877 NlpC/P60 family DJ564_RS09695 PF01596 O-methyltransferase DJ564_RS09700 PF07995 Glucose / Sorbosone dehydrogenase DJ564_RS09710 PF12557 Cob(I)alamin adenosyltransferase N terminal DJ564_RS09710 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DJ564_RS09715 PF07685 CobB/CobQ-like glutamine amidotransferase domain DJ564_RS09715 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DJ564_RS09720 PF00881 Nitroreductase family DJ564_RS09725 PF03186 CobD/Cbib protein DJ564_RS09725 PF17113 Regulatory signalling modulator protein AmpE DJ564_RS09730 PF00155 Aminotransferase class I and II DJ564_RS09735 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DJ564_RS09735 PF07685 CobB/CobQ-like glutamine amidotransferase domain DJ564_RS09740 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DJ564_RS09745 PF02277 Phosphoribosyltransferase DJ564_RS09750 PF00300 Histidine phosphatase superfamily (branch 1) DJ564_RS09755 PF02654 Cobalamin-5-phosphate synthase DJ564_RS09770 PF00255 Glutathione peroxidase DJ564_RS09800 PF02646 RmuC family DJ564_RS09805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS09805 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS09805 PF00072 Response regulator receiver domain DJ564_RS09805 PF09308 LuxQ, periplasmic DJ564_RS09830 PF07690 Major Facilitator Superfamily DJ564_RS09835 PF00893 Small Multidrug Resistance protein DJ564_RS09840 PF01758 Sodium Bile acid symporter family DJ564_RS09845 PF04381 Putative exonuclease, RdgC DJ564_RS09870 PF00199 Catalase DJ564_RS09880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJ564_RS09880 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DJ564_RS09910 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS09910 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS09910 PF00563 EAL domain DJ564_RS09915 PF11818 C-terminal domain of tail specific protease (DUF3340) DJ564_RS09915 PF03572 Peptidase family S41 DJ564_RS09915 PF00595 PDZ domain DJ564_RS09915 PF17804 Tail specific protease N-terminal domain DJ564_RS09920 PF00550 Phosphopantetheine attachment site DJ564_RS09920 PF00698 Acyl transferase domain DJ564_RS09920 PF14765 Polyketide synthase dehydratase DJ564_RS09920 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS09920 PF08659 KR domain DJ564_RS09930 PF08402 TOBE domain DJ564_RS09930 PF00005 ABC transporter DJ564_RS09940 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS09955 PF07702 UTRA domain DJ564_RS09955 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS09960 PF00924 Mechanosensitive ion channel DJ564_RS09965 PF02127 Aminopeptidase I zinc metalloprotease (M18) DJ564_RS09975 PF00849 RNA pseudouridylate synthase DJ564_RS09980 PF03776 Septum formation topological specificity factor MinE DJ564_RS09985 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DJ564_RS09990 PF05209 Septum formation inhibitor MinC, N-terminal domain DJ564_RS09990 PF03775 Septum formation inhibitor MinC, C-terminal domain DJ564_RS09995 PF03279 Bacterial lipid A biosynthesis acyltransferase DJ564_RS10020 PF00860 Permease family DJ564_RS10030 PF04115 Ureidoglycolate lyase DJ564_RS10035 PF03561 Allantoicase repeat DJ564_RS10040 PF01014 Uricase DJ564_RS10040 PF09349 OHCU decarboxylase DJ564_RS10050 PF00576 HIUase/Transthyretin family DJ564_RS10060 PF00860 Permease family DJ564_RS10070 PF01227 GTP cyclohydrolase I DJ564_RS10075 PF01713 Smr domain DJ564_RS10090 PF05175 Methyltransferase small domain DJ564_RS10100 PF12146 Serine aminopeptidase, S33 DJ564_RS10100 PF13026 Protein of unknown function (DUF3887) DJ564_RS10105 PF01264 Chorismate synthase DJ564_RS10110 PF12832 MFS_1 like family DJ564_RS10115 PF00596 Class II Aldolase and Adducin N-terminal domain DJ564_RS10120 PF03079 ARD/ARD' family DJ564_RS10125 PF13419 Haloacid dehalogenase-like hydrolase DJ564_RS10135 PF00501 AMP-binding enzyme DJ564_RS10135 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS10140 PF00023 Ankyrin repeat DJ564_RS10140 PF12796 Ankyrin repeats (3 copies) DJ564_RS10155 PF17284 Spermidine synthase tetramerisation domain DJ564_RS10170 PF14403 Circularly permuted ATP-grasp type 2 DJ564_RS10175 PF14403 Circularly permuted ATP-grasp type 2 DJ564_RS10175 PF04168 A predicted alpha-helical domain with a conserved ER motif. DJ564_RS10180 PF08379 Bacterial transglutaminase-like N-terminal region DJ564_RS10180 PF01841 Transglutaminase-like superfamily DJ564_RS10190 PF00108 Thiolase, N-terminal domain DJ564_RS10190 PF02803 Thiolase, C-terminal domain DJ564_RS10195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ564_RS10195 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS10195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ564_RS10200 PF02540 NAD synthase DJ564_RS10200 PF00117 Glutamine amidotransferase class-I DJ564_RS10200 PF00958 GMP synthase C terminal domain DJ564_RS10205 PF01544 CorA-like Mg2+ transporter protein DJ564_RS10210 PF01553 Acyltransferase DJ564_RS10230 PF01906 Putative heavy-metal-binding DJ564_RS10270 PF03527 RHS protein DJ564_RS10270 PF05593 RHS Repeat DJ564_RS10275 PF13419 Haloacid dehalogenase-like hydrolase DJ564_RS10285 PF03466 LysR substrate binding domain DJ564_RS10285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS10290 PF01177 Asp/Glu/Hydantoin racemase DJ564_RS10300 PF01507 Phosphoadenosine phosphosulfate reductase family DJ564_RS10310 PF00425 chorismate binding enzyme DJ564_RS10310 PF04715 Anthranilate synthase component I, N terminal region DJ564_RS10320 PF18030 RimK PreATP-grasp domain DJ564_RS10320 PF08443 RimK-like ATP-grasp domain DJ564_RS10330 PF18030 RimK PreATP-grasp domain DJ564_RS10330 PF08443 RimK-like ATP-grasp domain DJ564_RS10335 PF07729 FCD domain DJ564_RS10335 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS10345 PF00285 Citrate synthase, C-terminal domain DJ564_RS10350 PF00330 Aconitase family (aconitate hydratase) DJ564_RS10350 PF00694 Aconitase C-terminal domain DJ564_RS10355 PF04303 PrpF protein DJ564_RS10360 PF03972 MmgE/PrpD family DJ564_RS10365 PF03618 Kinase/pyrophosphorylase DJ564_RS10370 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DJ564_RS10370 PF02896 PEP-utilising enzyme, TIM barrel domain DJ564_RS10370 PF00391 PEP-utilising enzyme, mobile domain DJ564_RS10380 PF03737 Aldolase/RraA DJ564_RS10385 PF01544 CorA-like Mg2+ transporter protein DJ564_RS10395 PF05552 Conserved TM helix DJ564_RS10405 PF05736 OprF membrane domain DJ564_RS10405 PF00691 OmpA family DJ564_RS10410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ564_RS10415 PF01568 Molydopterin dinucleotide binding domain DJ564_RS10415 PF04324 BFD-like [2Fe-2S] binding domain DJ564_RS10415 PF00384 Molybdopterin oxidoreductase DJ564_RS10415 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ564_RS10425 PF00069 Protein kinase domain DJ564_RS10425 PF03793 PASTA domain DJ564_RS10430 PF07690 Major Facilitator Superfamily DJ564_RS10435 PF08376 Nitrate and nitrite sensing DJ564_RS10435 PF03861 ANTAR domain DJ564_RS10440 PF00005 ABC transporter DJ564_RS10445 PF01180 Dihydroorotate dehydrogenase DJ564_RS10450 PF04957 Ribosome modulation factor DJ564_RS10455 PF10672 S-adenosylmethionine-dependent methyltransferase DJ564_RS10455 PF01170 Putative RNA methylase family UPF0020 DJ564_RS10455 PF02926 THUMP domain DJ564_RS10460 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS10470 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DJ564_RS10475 PF04320 Protein with unknown function (DUF469) DJ564_RS10480 PF03594 Benzoate membrane transport protein DJ564_RS10485 PF07729 FCD domain DJ564_RS10485 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS10490 PF01979 Amidohydrolase family DJ564_RS10500 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DJ564_RS10500 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DJ564_RS10505 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS10505 PF01799 [2Fe-2S] binding domain DJ564_RS10515 PF02463 RecF/RecN/SMC N terminal domain DJ564_RS10515 PF06470 SMC proteins Flexible Hinge Domain DJ564_RS10520 PF04354 ZipA, C-terminal FtsZ-binding domain DJ564_RS10525 PF03120 NAD-dependent DNA ligase OB-fold domain DJ564_RS10525 PF01653 NAD-dependent DNA ligase adenylation domain DJ564_RS10525 PF00533 BRCA1 C Terminus (BRCT) domain DJ564_RS10525 PF12826 Helix-hairpin-helix motif DJ564_RS10525 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DJ564_RS10530 PF15887 Putative zinc-binding metallo-peptidase DJ564_RS10530 PF10005 zinc-ribbon domain DJ564_RS10560 PF00239 Resolvase, N terminal domain DJ564_RS10560 PF02796 Helix-turn-helix domain of resolvase DJ564_RS10595 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS10595 PF00563 EAL domain DJ564_RS10595 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS10605 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DJ564_RS10605 PF12170 DNA polymerase III tau subunit V interacting with alpha DJ564_RS10605 PF12169 DNA polymerase III subunits gamma and tau domain III DJ564_RS10610 PF02575 YbaB/EbfC DNA-binding family DJ564_RS10615 PF16884 N-terminal domain of oxidoreductase DJ564_RS10615 PF00107 Zinc-binding dehydrogenase DJ564_RS10620 PF02132 RecR protein DJ564_RS10620 PF13662 Toprim domain DJ564_RS10625 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS10625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS10625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS10630 PF00156 Phosphoribosyl transferase domain DJ564_RS10635 PF00027 Cyclic nucleotide-binding domain DJ564_RS10635 PF13545 Crp-like helix-turn-helix domain DJ564_RS10640 PF06969 HemN C-terminal domain DJ564_RS10640 PF04055 Radical SAM superfamily DJ564_RS10655 PF00403 Heavy-metal-associated domain DJ564_RS10670 PF13746 4Fe-4S dicluster domain DJ564_RS10670 PF12801 4Fe-4S binding domain DJ564_RS10670 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DJ564_RS10680 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DJ564_RS10680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ564_RS10695 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ564_RS10700 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ564_RS10700 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DJ564_RS10715 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ564_RS10730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS10730 PF08447 PAS fold DJ564_RS10740 PF00694 Aconitase C-terminal domain DJ564_RS10740 PF00330 Aconitase family (aconitate hydratase) DJ564_RS10745 PF18125 RlmM ferredoxin-like domain DJ564_RS10745 PF01728 FtsJ-like methyltransferase DJ564_RS10750 PF01206 Sulfurtransferase TusA DJ564_RS10755 PF01554 MatE DJ564_RS10760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ564_RS10760 PF11890 Domain of unknown function (DUF3410) DJ564_RS10760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ564_RS10770 PF00005 ABC transporter DJ564_RS10770 PF00664 ABC transporter transmembrane region DJ564_RS10775 PF01464 Transglycosylase SLT domain DJ564_RS10775 PF14718 Soluble lytic murein transglycosylase L domain DJ564_RS10785 PF00005 ABC transporter DJ564_RS10785 PF16326 ABC transporter C-terminal domain DJ564_RS10785 PF12848 ABC transporter DJ564_RS10795 PF00582 Universal stress protein family DJ564_RS10805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ564_RS10805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ564_RS10805 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS10810 PF00108 Thiolase, N-terminal domain DJ564_RS10810 PF02803 Thiolase, C-terminal domain DJ564_RS10820 PF01396 Topoisomerase DNA binding C4 zinc finger DJ564_RS10820 PF01131 DNA topoisomerase DJ564_RS10820 PF08272 Topoisomerase I zinc-ribbon-like DJ564_RS10820 PF01751 Toprim domain DJ564_RS10835 PF03846 Cell division inhibitor SulA DJ564_RS10840 PF00717 Peptidase S24-like DJ564_RS10840 PF01726 LexA DNA binding domain DJ564_RS10845 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS10850 PF00933 Glycosyl hydrolase family 3 N terminal domain DJ564_RS10855 PF01048 Phosphorylase superfamily DJ564_RS10865 PF00176 SNF2 family N-terminal domain DJ564_RS10865 PF00271 Helicase conserved C-terminal domain DJ564_RS10865 PF12419 SNF2 Helicase protein DJ564_RS10875 PF02559 CarD-like/TRCF domain DJ564_RS10875 PF17757 UvrB interaction domain DJ564_RS10875 PF03461 TRCF domain DJ564_RS10875 PF00271 Helicase conserved C-terminal domain DJ564_RS10875 PF00270 DEAD/DEAH box helicase DJ564_RS10880 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DJ564_RS10880 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ564_RS10885 PF07690 Major Facilitator Superfamily DJ564_RS10890 PF02424 ApbE family DJ564_RS10895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ564_RS10895 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS10900 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ564_RS10910 PF12704 MacB-like periplasmic core domain DJ564_RS10910 PF02687 FtsX-like permease family DJ564_RS10915 PF00005 ABC transporter DJ564_RS10920 PF02687 FtsX-like permease family DJ564_RS10920 PF12704 MacB-like periplasmic core domain DJ564_RS10925 PF00672 HAMP domain DJ564_RS10925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS10925 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS10930 PF00072 Response regulator receiver domain DJ564_RS10930 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS10940 PF14489 QueF-like protein DJ564_RS10940 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DJ564_RS10955 PF04333 MlaA lipoprotein DJ564_RS10965 PF02954 Bacterial regulatory protein, Fis family DJ564_RS10965 PF00072 Response regulator receiver domain DJ564_RS10965 PF00158 Sigma-54 interaction domain DJ564_RS10975 PF00923 Transaldolase/Fructose-6-phosphate aldolase DJ564_RS10990 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ564_RS10995 PF02706 Chain length determinant protein DJ564_RS10995 PF13807 G-rich domain on putative tyrosine kinase DJ564_RS10995 PF13614 AAA domain DJ564_RS11000 PF00534 Glycosyl transferases group 1 DJ564_RS11000 PF13439 Glycosyltransferase Family 4 DJ564_RS11035 PF00483 Nucleotidyl transferase DJ564_RS11040 PF16363 GDP-mannose 4,6 dehydratase DJ564_RS11050 PF10531 SLBB domain DJ564_RS11050 PF18412 Outer-membrane lipoprotein Wza C-terminal domain DJ564_RS11050 PF02563 Polysaccharide biosynthesis/export protein DJ564_RS11065 PF06082 Exopolysaccharide biosynthesis protein YbjH DJ564_RS11070 PF02397 Bacterial sugar transferase DJ564_RS11090 PF02673 Bacitracin resistance protein BacA DJ564_RS11095 PF01207 Dihydrouridine synthase (Dus) DJ564_RS11105 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS11110 PF00403 Heavy-metal-associated domain DJ564_RS11125 PF05425 Copper resistance protein D DJ564_RS11130 PF04234 CopC domain DJ564_RS11135 PF05275 Copper resistance protein B precursor (CopB) DJ564_RS11140 PF00394 Multicopper oxidase DJ564_RS11140 PF07731 Multicopper oxidase DJ564_RS11140 PF07732 Multicopper oxidase DJ564_RS11150 PF03734 L,D-transpeptidase catalytic domain DJ564_RS11160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS11160 PF03466 LysR substrate binding domain DJ564_RS11165 PF13419 Haloacid dehalogenase-like hydrolase DJ564_RS11170 PF00596 Class II Aldolase and Adducin N-terminal domain DJ564_RS11175 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS11175 PF00360 Phytochrome region DJ564_RS11175 PF00563 EAL domain DJ564_RS11175 PF01590 GAF domain DJ564_RS11215 PF13289 SIR2-like domain DJ564_RS11225 PF01695 IstB-like ATP binding protein DJ564_RS11230 PF00665 Integrase core domain DJ564_RS11235 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS11235 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS11235 PF00563 EAL domain DJ564_RS11240 PF01590 GAF domain DJ564_RS11240 PF00563 EAL domain DJ564_RS11240 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS11240 PF00360 Phytochrome region DJ564_RS11245 PF00248 Aldo/keto reductase family DJ564_RS11250 PF00561 alpha/beta hydrolase fold DJ564_RS11255 PF01418 Helix-turn-helix domain, rpiR family DJ564_RS11255 PF01380 SIS domain DJ564_RS11265 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS11270 PF03575 Peptidase family S51 DJ564_RS11285 PF01047 MarR family DJ564_RS11305 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS11305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ564_RS11320 PF02798 Glutathione S-transferase, N-terminal domain DJ564_RS11325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS11325 PF03466 LysR substrate binding domain DJ564_RS11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS11330 PF03466 LysR substrate binding domain DJ564_RS11340 PF00042 Globin DJ564_RS11340 PF00970 Oxidoreductase FAD-binding domain DJ564_RS11340 PF00175 Oxidoreductase NAD-binding domain DJ564_RS11375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS11375 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS11380 PF00873 AcrB/AcrD/AcrF family DJ564_RS11430 PF13005 zinc-finger binding domain of transposase IS66 DJ564_RS11430 PF13007 Transposase C of IS166 homeodomain DJ564_RS11430 PF13817 IS66 C-terminal element DJ564_RS11430 PF03050 Transposase IS66 family DJ564_RS11450 PF00183 Hsp90 protein DJ564_RS11450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS11480 PF02769 AIR synthase related protein, C-terminal domain DJ564_RS11480 PF00586 AIR synthase related protein, N-terminal domain DJ564_RS11495 PF02798 Glutathione S-transferase, N-terminal domain DJ564_RS11495 PF00043 Glutathione S-transferase, C-terminal domain DJ564_RS11500 PF02567 Phenazine biosynthesis-like protein DJ564_RS11505 PF00490 Delta-aminolevulinic acid dehydratase DJ564_RS11515 PF01494 FAD binding domain DJ564_RS11520 PF07759 Protein of unknown function (DUF1615) DJ564_RS11540 PF04545 Sigma-70, region 4 DJ564_RS11540 PF04542 Sigma-70 region 2 DJ564_RS11555 PF00571 CBS domain DJ564_RS11560 PF03104 DNA polymerase family B, exonuclease domain DJ564_RS11560 PF00136 DNA polymerase family B DJ564_RS11570 PF00248 Aldo/keto reductase family DJ564_RS11575 PF01263 Aldose 1-epimerase DJ564_RS11585 PF01925 Sulfite exporter TauE/SafE DJ564_RS11610 PF00144 Beta-lactamase DJ564_RS11615 PF03466 LysR substrate binding domain DJ564_RS11615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS11620 PF13378 Enolase C-terminal domain-like DJ564_RS11620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ564_RS11625 PF07690 Major Facilitator Superfamily DJ564_RS11630 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS11645 PF03466 LysR substrate binding domain DJ564_RS11650 PF01136 Peptidase family U32 DJ564_RS11650 PF16325 Peptidase family U32 C-terminal domain DJ564_RS11655 PF01594 AI-2E family transporter DJ564_RS11675 PF08501 Shikimate dehydrogenase substrate binding domain DJ564_RS11685 PF04337 Protein of unknown function, DUF480 DJ564_RS11695 PF00375 Sodium:dicarboxylate symporter family DJ564_RS11700 PF07690 Major Facilitator Superfamily DJ564_RS11705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS11705 PF03466 LysR substrate binding domain DJ564_RS11715 PF03741 Integral membrane protein TerC family DJ564_RS11715 PF03471 Transporter associated domain DJ564_RS11735 PF00768 D-alanyl-D-alanine carboxypeptidase DJ564_RS11740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DJ564_RS11740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DJ564_RS11765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJ564_RS11765 PF05697 Bacterial trigger factor protein (TF) DJ564_RS11765 PF05698 Bacterial trigger factor protein (TF) C-terminus DJ564_RS11770 PF00574 Clp protease DJ564_RS11775 PF06689 ClpX C4-type zinc finger DJ564_RS11775 PF07724 AAA domain (Cdc48 subfamily) DJ564_RS11775 PF10431 C-terminal, D2-small domain, of ClpB protein DJ564_RS11780 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ564_RS11780 PF02190 ATP-dependent protease La (LON) substrate-binding domain DJ564_RS11780 PF00004 ATPase family associated with various cellular activities (AAA) DJ564_RS11785 PF00216 Bacterial DNA-binding protein DJ564_RS11790 PF00639 PPIC-type PPIASE domain DJ564_RS11790 PF09312 SurA N-terminal domain DJ564_RS11800 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DJ564_RS11800 PF12833 Helix-turn-helix domain DJ564_RS11810 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS11810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ564_RS11820 PF01292 Prokaryotic cytochrome b561 DJ564_RS11825 PF13419 Haloacid dehalogenase-like hydrolase DJ564_RS11835 PF00266 Aminotransferase class-V DJ564_RS11840 PF03466 LysR substrate binding domain DJ564_RS11840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS11845 PF03466 LysR substrate binding domain DJ564_RS11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS11855 PF01266 FAD dependent oxidoreductase DJ564_RS11860 PF04717 Type VI secretion system, phage-baseplate injector DJ564_RS11865 PF01709 Transcriptional regulator DJ564_RS11900 PF02753 Pili assembly chaperone PapD, C-terminal domain DJ564_RS11900 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain DJ564_RS11930 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS11930 PF04324 BFD-like [2Fe-2S] binding domain DJ564_RS11940 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS11945 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS11950 PF08402 TOBE domain DJ564_RS11950 PF00005 ABC transporter DJ564_RS11960 PF01614 Bacterial transcriptional regulator DJ564_RS11960 PF09339 IclR helix-turn-helix domain DJ564_RS11975 PF04542 Sigma-70 region 2 DJ564_RS11975 PF08281 Sigma-70, region 4 DJ564_RS11985 PF01292 Prokaryotic cytochrome b561 DJ564_RS11990 PF00246 Zinc carboxypeptidase DJ564_RS11990 PF18027 Cytosolic carboxypeptidase N-terminal domain DJ564_RS12000 PF00717 Peptidase S24-like DJ564_RS12005 PF00364 Biotin-requiring enzyme DJ564_RS12005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ564_RS12005 PF02785 Biotin carboxylase C-terminal domain DJ564_RS12005 PF00289 Biotin carboxylase, N-terminal domain DJ564_RS12010 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS12015 PF01039 Carboxyl transferase domain DJ564_RS12020 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS12020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS12020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS12025 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS12025 PF00501 AMP-binding enzyme DJ564_RS12030 PF00682 HMGL-like DJ564_RS12035 PF13411 MerR HTH family regulatory protein DJ564_RS12040 PF03466 LysR substrate binding domain DJ564_RS12040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS12045 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS12045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS12045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS12050 PF12849 PBP superfamily domain DJ564_RS12055 PF03372 Endonuclease/Exonuclease/phosphatase family DJ564_RS12065 PF01103 Surface antigen DJ564_RS12065 PF07244 Surface antigen variable number repeat DJ564_RS12065 PF17243 POTRA domain TamA domain 1 DJ564_RS12070 PF04357 TamB, inner membrane protein subunit of TAM complex DJ564_RS12075 PF01047 MarR family DJ564_RS12080 PF02321 Outer membrane efflux protein DJ564_RS12085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS12085 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS12090 PF07690 Major Facilitator Superfamily DJ564_RS12095 PF00149 Calcineurin-like phosphoesterase DJ564_RS12100 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DJ564_RS12105 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DJ564_RS12105 PF00749 tRNA synthetases class I (E and Q), catalytic domain DJ564_RS12110 PF09190 DALR domain DJ564_RS12110 PF01406 tRNA synthetases class I (C) catalytic domain DJ564_RS12115 PF00158 Sigma-54 interaction domain DJ564_RS12115 PF01590 GAF domain DJ564_RS12115 PF02954 Bacterial regulatory protein, Fis family DJ564_RS12120 PF00005 ABC transporter DJ564_RS12120 PF17912 MalK OB fold domain DJ564_RS12125 PF17912 MalK OB fold domain DJ564_RS12125 PF00005 ABC transporter DJ564_RS12130 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS12135 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS12150 PF00561 alpha/beta hydrolase fold DJ564_RS12165 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA DJ564_RS12190 PF00361 Proton-conducting membrane transporter DJ564_RS12195 PF00361 Proton-conducting membrane transporter DJ564_RS12200 PF00361 Proton-conducting membrane transporter DJ564_RS12200 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DJ564_RS12205 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DJ564_RS12210 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DJ564_RS12215 PF12838 4Fe-4S dicluster domain DJ564_RS12220 PF00146 NADH dehydrogenase DJ564_RS12225 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ564_RS12225 PF00384 Molybdopterin oxidoreductase DJ564_RS12225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ564_RS12230 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DJ564_RS12230 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DJ564_RS12240 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DJ564_RS12240 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DJ564_RS12245 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DJ564_RS12250 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DJ564_RS12255 PF00463 Isocitrate lyase family DJ564_RS12260 PF07660 Secretin and TonB N terminus short domain DJ564_RS12260 PF03958 Bacterial type II/III secretion system short domain DJ564_RS12260 PF00263 Bacterial type II and III secretion system protein DJ564_RS12260 PF11741 AMIN domain DJ564_RS12265 PF13673 Acetyltransferase (GNAT) domain DJ564_RS12270 PF08007 Cupin superfamily protein DJ564_RS12275 PF08328 Adenylosuccinate lyase C-terminal DJ564_RS12275 PF00206 Lyase DJ564_RS12280 PF04356 Protein of unknown function (DUF489) DJ564_RS12290 PF00293 NUDIX domain DJ564_RS12295 PF03971 Monomeric isocitrate dehydrogenase DJ564_RS12305 PF00180 Isocitrate/isopropylmalate dehydrogenase DJ564_RS12310 PF00313 'Cold-shock' DNA-binding domain DJ564_RS12315 PF02617 ATP-dependent Clp protease adaptor protein ClpS DJ564_RS12320 PF10431 C-terminal, D2-small domain, of ClpB protein DJ564_RS12320 PF02861 Clp amino terminal domain, pathogenicity island component DJ564_RS12320 PF17871 AAA lid domain DJ564_RS12320 PF00004 ATPase family associated with various cellular activities (AAA) DJ564_RS12320 PF07724 AAA domain (Cdc48 subfamily) DJ564_RS12325 PF01176 Translation initiation factor 1A / IF-1 DJ564_RS12330 PF04377 Arginine-tRNA-protein transferase, C terminus DJ564_RS12330 PF04376 Arginine-tRNA-protein transferase, N terminus DJ564_RS12335 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DJ564_RS12340 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS12345 PF17854 FtsK alpha domain DJ564_RS12345 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DJ564_RS12345 PF01580 FtsK/SpoIIIE family DJ564_RS12345 PF09397 Ftsk gamma domain DJ564_RS12350 PF03548 Outer membrane lipoprotein carrier protein LolA DJ564_RS12355 PF00004 ATPase family associated with various cellular activities (AAA) DJ564_RS12355 PF12002 MgsA AAA+ ATPase C terminal DJ564_RS12355 PF16193 AAA C-terminal domain DJ564_RS12360 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DJ564_RS12365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ564_RS12365 PF02403 Seryl-tRNA synthetase N-terminal domain DJ564_RS12370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ564_RS12370 PF14824 Sirohaem biosynthesis protein central DJ564_RS12370 PF10414 Sirohaem synthase dimerisation region DJ564_RS12375 PF13409 Glutathione S-transferase, N-terminal domain DJ564_RS12380 PF02885 Glycosyl transferase family, helical bundle domain DJ564_RS12380 PF00591 Glycosyl transferase family, a/b domain DJ564_RS12385 PF04358 DsrC like protein DJ564_RS12395 PF02635 DsrE/DsrF-like family DJ564_RS12400 PF02635 DsrE/DsrF-like family DJ564_RS12405 PF06912 Protein of unknown function (DUF1275) DJ564_RS12430 PF00583 Acetyltransferase (GNAT) family DJ564_RS12440 PF18416 N-acetylglucosamine binding protein domain 2 DJ564_RS12440 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DJ564_RS12445 PF00704 Glycosyl hydrolases family 18 DJ564_RS12450 PF00293 NUDIX domain DJ564_RS12455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJ564_RS12455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJ564_RS12465 PF00857 Isochorismatase family DJ564_RS12470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS12470 PF03466 LysR substrate binding domain DJ564_RS12475 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DJ564_RS12490 PF02080 TrkA-C domain DJ564_RS12490 PF02254 TrkA-N domain DJ564_RS12495 PF02386 Cation transport protein DJ564_RS12505 PF03547 Membrane transport protein DJ564_RS12510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ564_RS12510 PF13378 Enolase C-terminal domain-like DJ564_RS12515 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS12520 PF03466 LysR substrate binding domain DJ564_RS12520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS12530 PF02633 Creatinine amidohydrolase DJ564_RS12550 PF02798 Glutathione S-transferase, N-terminal domain DJ564_RS12550 PF14834 Glutathione S-transferase, C-terminal domain DJ564_RS12560 PF00293 NUDIX domain DJ564_RS12560 PF09297 NADH pyrophosphatase zinc ribbon domain DJ564_RS12575 PF03466 LysR substrate binding domain DJ564_RS12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS12580 PF00171 Aldehyde dehydrogenase family DJ564_RS12585 PF03466 LysR substrate binding domain DJ564_RS12585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS12590 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DJ564_RS12595 PF07690 Major Facilitator Superfamily DJ564_RS12605 PF00465 Iron-containing alcohol dehydrogenase DJ564_RS12610 PF00171 Aldehyde dehydrogenase family DJ564_RS12615 PF03951 Glutamine synthetase, beta-Grasp domain DJ564_RS12615 PF00120 Glutamine synthetase, catalytic domain DJ564_RS12630 PF07969 Amidohydrolase family DJ564_RS12640 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DJ564_RS12645 PF10417 C-terminal domain of 1-Cys peroxiredoxin DJ564_RS12645 PF00578 AhpC/TSA family DJ564_RS12650 PF00583 Acetyltransferase (GNAT) family DJ564_RS12670 PF01068 ATP dependent DNA ligase domain DJ564_RS12670 PF04679 ATP dependent DNA ligase C terminal region DJ564_RS12670 PF13298 DNA polymerase Ligase (LigD) DJ564_RS12695 PF02082 Transcriptional regulator DJ564_RS12700 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS12710 PF00462 Glutaredoxin DJ564_RS12745 PF07237 Protein of unknown function (DUF1428) DJ564_RS12755 PF02834 LigT like Phosphoesterase DJ564_RS12760 PF13416 Bacterial extracellular solute-binding protein DJ564_RS12765 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS12770 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS12775 PF00005 ABC transporter DJ564_RS12775 PF08402 TOBE domain DJ564_RS12780 PF07722 Peptidase C26 DJ564_RS12785 PF00120 Glutamine synthetase, catalytic domain DJ564_RS12790 PF00171 Aldehyde dehydrogenase family DJ564_RS12795 PF01266 FAD dependent oxidoreductase DJ564_RS12800 PF01381 Helix-turn-helix DJ564_RS12800 PF07883 Cupin domain DJ564_RS12805 PF00293 NUDIX domain DJ564_RS12805 PF09297 NADH pyrophosphatase zinc ribbon domain DJ564_RS12850 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DJ564_RS12855 PF07687 Peptidase dimerisation domain DJ564_RS12855 PF01546 Peptidase family M20/M25/M40 DJ564_RS12865 PF01042 Endoribonuclease L-PSP DJ564_RS12875 PF12833 Helix-turn-helix domain DJ564_RS12875 PF01965 DJ-1/PfpI family DJ564_RS12885 PF02630 SCO1/SenC DJ564_RS12890 PF04328 Selenoprotein, putative DJ564_RS12915 PF00083 Sugar (and other) transporter DJ564_RS12915 PF07690 Major Facilitator Superfamily DJ564_RS12925 PF11954 Domain of unknown function (DUF3471) DJ564_RS12925 PF00144 Beta-lactamase DJ564_RS12930 PF00455 DeoR C terminal sensor domain DJ564_RS12930 PF08220 DeoR-like helix-turn-helix domain DJ564_RS12935 PF01738 Dienelactone hydrolase family DJ564_RS12945 PF12833 Helix-turn-helix domain DJ564_RS12945 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DJ564_RS12965 PF02652 L-lactate permease DJ564_RS12985 PF12833 Helix-turn-helix domain DJ564_RS12985 PF01965 DJ-1/PfpI family DJ564_RS12990 PF00795 Carbon-nitrogen hydrolase DJ564_RS12995 PF01738 Dienelactone hydrolase family DJ564_RS13000 PF13417 Glutathione S-transferase, N-terminal domain DJ564_RS13005 PF07681 DoxX DJ564_RS13020 PF04960 Glutaminase DJ564_RS13025 PF00171 Aldehyde dehydrogenase family DJ564_RS13040 PF00970 Oxidoreductase FAD-binding domain DJ564_RS13040 PF00042 Globin DJ564_RS13040 PF00175 Oxidoreductase NAD-binding domain DJ564_RS13045 PF00484 Carbonic anhydrase DJ564_RS13055 PF02560 Cyanate lyase C-terminal domain DJ564_RS13060 PF03466 LysR substrate binding domain DJ564_RS13060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS13085 PF01751 Toprim domain DJ564_RS13085 PF01131 DNA topoisomerase DJ564_RS13095 PF01070 FMN-dependent dehydrogenase DJ564_RS13100 PF00083 Sugar (and other) transporter DJ564_RS13100 PF08946 Osmosensory transporter coiled coil DJ564_RS13105 PF05199 GMC oxidoreductase DJ564_RS13105 PF00732 GMC oxidoreductase DJ564_RS13115 PF02806 Alpha amylase, C-terminal all-beta domain DJ564_RS13115 PF00128 Alpha amylase, catalytic domain DJ564_RS13115 PF00686 Starch binding domain DJ564_RS13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS13130 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS13135 PF00072 Response regulator receiver domain DJ564_RS13135 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS13145 PF00106 short chain dehydrogenase DJ564_RS13155 PF00501 AMP-binding enzyme DJ564_RS13165 PF01292 Prokaryotic cytochrome b561 DJ564_RS13195 PF08713 DNA alkylation repair enzyme DJ564_RS13205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS13205 PF03466 LysR substrate binding domain DJ564_RS13210 PF00296 Luciferase-like monooxygenase DJ564_RS13215 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS13215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ564_RS13220 PF13417 Glutathione S-transferase, N-terminal domain DJ564_RS13225 PF01418 Helix-turn-helix domain, rpiR family DJ564_RS13225 PF01380 SIS domain DJ564_RS13230 PF00294 pfkB family carbohydrate kinase DJ564_RS13235 PF01261 Xylose isomerase-like TIM barrel DJ564_RS13240 PF04962 KduI/IolB family DJ564_RS13245 PF00171 Aldehyde dehydrogenase family DJ564_RS13255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ564_RS13255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ564_RS13255 PF00205 Thiamine pyrophosphate enzyme, central domain DJ564_RS13260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ564_RS13260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ564_RS13265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ564_RS13265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ564_RS13270 PF13407 Periplasmic binding protein domain DJ564_RS13275 PF00005 ABC transporter DJ564_RS13280 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS13285 PF01258 Prokaryotic dksA/traR C4-type zinc finger DJ564_RS13290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS13290 PF00672 HAMP domain DJ564_RS13335 PF03334 Na+/H+ antiporter subunit DJ564_RS13340 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DJ564_RS13350 PF00361 Proton-conducting membrane transporter DJ564_RS13355 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DJ564_RS13360 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DJ564_RS13360 PF13244 Domain of unknown function (DUF4040) DJ564_RS13360 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DJ564_RS13360 PF00361 Proton-conducting membrane transporter DJ564_RS13395 PF00005 ABC transporter DJ564_RS13400 PF01494 FAD binding domain DJ564_RS13410 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS13425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS13425 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS13425 PF00672 HAMP domain DJ564_RS13430 PF00072 Response regulator receiver domain DJ564_RS13430 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS13440 PF11892 Domain of unknown function (DUF3412) DJ564_RS13440 PF03641 Possible lysine decarboxylase DJ564_RS13440 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DJ564_RS13450 PF00360 Phytochrome region DJ564_RS13450 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS13450 PF00563 EAL domain DJ564_RS13450 PF01590 GAF domain DJ564_RS13480 PF02586 SOS response associated peptidase (SRAP) DJ564_RS13495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS13495 PF03466 LysR substrate binding domain DJ564_RS13500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ564_RS13500 PF13378 Enolase C-terminal domain-like DJ564_RS13505 PF02426 Muconolactone delta-isomerase DJ564_RS13510 PF04444 Catechol dioxygenase N terminus DJ564_RS13510 PF00775 Dioxygenase DJ564_RS13515 PF12833 Helix-turn-helix domain DJ564_RS13515 PF14525 AraC-binding-like domain DJ564_RS13520 PF00355 Rieske [2Fe-2S] domain DJ564_RS13520 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DJ564_RS13525 PF00866 Ring hydroxylating beta subunit DJ564_RS13530 PF00175 Oxidoreductase NAD-binding domain DJ564_RS13530 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS13530 PF00970 Oxidoreductase FAD-binding domain DJ564_RS13535 PF00106 short chain dehydrogenase DJ564_RS13540 PF00293 NUDIX domain DJ564_RS13620 PF13520 Amino acid permease DJ564_RS13630 PF13426 PAS domain DJ564_RS13630 PF08447 PAS fold DJ564_RS13630 PF00563 EAL domain DJ564_RS13630 PF08448 PAS fold DJ564_RS13630 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS13630 PF05231 MASE1 DJ564_RS13640 PF02333 Phytase DJ564_RS13645 PF01618 MotA/TolQ/ExbB proton channel family DJ564_RS13650 PF02472 Biopolymer transport protein ExbD/TolR DJ564_RS13660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS13660 PF03466 LysR substrate binding domain DJ564_RS13665 PF07690 Major Facilitator Superfamily DJ564_RS13675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ564_RS13675 PF02142 MGS-like domain DJ564_RS13675 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJ564_RS13685 PF07836 DmpG-like communication domain DJ564_RS13685 PF00682 HMGL-like DJ564_RS13690 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation DJ564_RS13690 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ564_RS13695 PF00155 Aminotransferase class I and II DJ564_RS13705 PF06719 AraC-type transcriptional regulator N-terminus DJ564_RS13705 PF12833 Helix-turn-helix domain DJ564_RS13720 PF12833 Helix-turn-helix domain DJ564_RS13725 PF00106 short chain dehydrogenase DJ564_RS13735 PF01027 Inhibitor of apoptosis-promoting Bax1 DJ564_RS13745 PF01037 Lrp/AsnC ligand binding domain DJ564_RS13750 PF00892 EamA-like transporter family DJ564_RS13760 PF00171 Aldehyde dehydrogenase family DJ564_RS13780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ564_RS13780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ564_RS13790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS13790 PF03466 LysR substrate binding domain DJ564_RS13800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS13800 PF03466 LysR substrate binding domain DJ564_RS13805 PF00248 Aldo/keto reductase family DJ564_RS13810 PF00106 short chain dehydrogenase DJ564_RS13825 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS13825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS13825 PF00672 HAMP domain DJ564_RS13830 PF00072 Response regulator receiver domain DJ564_RS13830 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS13850 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS13850 PF04324 BFD-like [2Fe-2S] binding domain DJ564_RS13855 PF01266 FAD dependent oxidoreductase DJ564_RS13860 PF02254 TrkA-N domain DJ564_RS13860 PF00999 Sodium/hydrogen exchanger family DJ564_RS13865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS13865 PF03466 LysR substrate binding domain DJ564_RS13875 PF07690 Major Facilitator Superfamily DJ564_RS13885 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS13885 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS13885 PF00563 EAL domain DJ564_RS13890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJ564_RS13900 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS13905 PF03466 LysR substrate binding domain DJ564_RS13905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS13915 PF02583 Metal-sensitive transcriptional repressor DJ564_RS13920 PF01545 Cation efflux family DJ564_RS13925 PF00067 Cytochrome P450 DJ564_RS13945 PF01063 Amino-transferase class IV DJ564_RS13950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ564_RS13950 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS13955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ564_RS13955 PF02817 e3 binding domain DJ564_RS13955 PF00364 Biotin-requiring enzyme DJ564_RS13960 PF02779 Transketolase, pyrimidine binding domain DJ564_RS13960 PF02780 Transketolase, C-terminal domain DJ564_RS13965 PF00676 Dehydrogenase E1 component DJ564_RS13965 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal DJ564_RS13970 PF01037 Lrp/AsnC ligand binding domain DJ564_RS13975 PF00753 Metallo-beta-lactamase superfamily DJ564_RS13980 PF01925 Sulfite exporter TauE/SafE DJ564_RS13995 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS13995 PF00072 Response regulator receiver domain DJ564_RS13995 PF09456 RcsC Alpha-Beta-Loop (ABL) DJ564_RS14000 PF00072 Response regulator receiver domain DJ564_RS14000 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS14015 PF00005 ABC transporter DJ564_RS14030 PF07730 Histidine kinase DJ564_RS14030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS14030 PF00672 HAMP domain DJ564_RS14035 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS14035 PF00072 Response regulator receiver domain DJ564_RS14050 PF13360 PQQ-like domain DJ564_RS14050 PF01011 PQQ enzyme repeat DJ564_RS14055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ564_RS14075 PF13360 PQQ-like domain DJ564_RS14075 PF01011 PQQ enzyme repeat DJ564_RS14085 PF00171 Aldehyde dehydrogenase family DJ564_RS14090 PF08042 PqqA family DJ564_RS14095 PF12706 Beta-lactamase superfamily domain DJ564_RS14100 PF03070 TENA/THI-4/PQQC family DJ564_RS14105 PF13186 Iron-sulfur cluster-binding domain DJ564_RS14105 PF04055 Radical SAM superfamily DJ564_RS14110 PF00465 Iron-containing alcohol dehydrogenase DJ564_RS14115 PF00072 Response regulator receiver domain DJ564_RS14115 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS14115 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS14125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DJ564_RS14135 PF03480 Bacterial extracellular solute-binding protein, family 7 DJ564_RS14140 PF08450 SMP-30/Gluconolactonase/LRE-like region DJ564_RS14145 PF01370 NAD dependent epimerase/dehydratase family DJ564_RS14150 PF03573 outer membrane porin, OprD family DJ564_RS14155 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS14155 PF08362 YcdC-like protein, C-terminal region DJ564_RS14160 PF01180 Dihydroorotate dehydrogenase DJ564_RS14165 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DJ564_RS14165 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS14170 PF01979 Amidohydrolase family DJ564_RS14175 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DJ564_RS14180 PF07687 Peptidase dimerisation domain DJ564_RS14180 PF01546 Peptidase family M20/M25/M40 DJ564_RS14190 PF04143 Sulphur transport DJ564_RS14195 PF00072 Response regulator receiver domain DJ564_RS14195 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS14205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ564_RS14205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ564_RS14220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ564_RS14220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ564_RS14230 PF14552 Tautomerase enzyme DJ564_RS14240 PF02321 Outer membrane efflux protein DJ564_RS14245 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS14250 PF00005 ABC transporter DJ564_RS14250 PF00664 ABC transporter transmembrane region DJ564_RS14275 PF00330 Aconitase family (aconitate hydratase) DJ564_RS14275 PF11791 Aconitate B N-terminal domain DJ564_RS14275 PF06434 Aconitate hydratase 2 N-terminus DJ564_RS14285 PF00582 Universal stress protein family DJ564_RS14290 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DJ564_RS14295 PF00072 Response regulator receiver domain DJ564_RS14295 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS14300 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS14300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS14300 PF00672 HAMP domain DJ564_RS14310 PF04828 Glutathione-dependent formaldehyde-activating enzyme DJ564_RS14320 PF03466 LysR substrate binding domain DJ564_RS14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS14325 PF04371 Porphyromonas-type peptidyl-arginine deiminase DJ564_RS14330 PF13416 Bacterial extracellular solute-binding protein DJ564_RS14345 PF12833 Helix-turn-helix domain DJ564_RS14345 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJ564_RS14345 PF02805 Metal binding domain of Ada DJ564_RS14345 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJ564_RS14350 PF03358 NADPH-dependent FMN reductase DJ564_RS14355 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ564_RS14395 PF05593 RHS Repeat DJ564_RS14395 PF03527 RHS protein DJ564_RS14435 PF00563 EAL domain DJ564_RS14435 PF08495 FIST N domain DJ564_RS14435 PF10442 FIST C domain DJ564_RS14435 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS14445 PF17158 Membrane-associated sensor, integral membrane domain DJ564_RS14445 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS14495 PF00892 EamA-like transporter family DJ564_RS14500 PF00155 Aminotransferase class I and II DJ564_RS14500 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS14520 PF01970 Tripartite tricarboxylate transporter TctA family DJ564_RS14525 PF01810 LysE type translocator DJ564_RS14530 PF12833 Helix-turn-helix domain DJ564_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS14550 PF03466 LysR substrate binding domain DJ564_RS14555 PF00106 short chain dehydrogenase DJ564_RS14560 PF01799 [2Fe-2S] binding domain DJ564_RS14560 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS14565 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DJ564_RS14575 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS14575 PF05230 MASE2 domain DJ564_RS14585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS14585 PF03466 LysR substrate binding domain DJ564_RS14600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ564_RS14600 PF00005 ABC transporter DJ564_RS14605 PF12911 N-terminal TM domain of oligopeptide transport permease C DJ564_RS14605 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS14610 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS14615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ564_RS14620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ564_RS14625 PF01464 Transglycosylase SLT domain DJ564_RS14625 PF01476 LysM domain DJ564_RS14630 PF16123 Hydroxyacylglutathione hydrolase C-terminus DJ564_RS14630 PF00753 Metallo-beta-lactamase superfamily DJ564_RS14640 PF00075 RNase H DJ564_RS14650 PF00929 Exonuclease DJ564_RS14655 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DJ564_RS14655 PF01276 Orn/Lys/Arg decarboxylase, major domain DJ564_RS14655 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DJ564_RS14675 PF03358 NADPH-dependent FMN reductase DJ564_RS14680 PF01022 Bacterial regulatory protein, arsR family DJ564_RS14685 PF02040 Arsenical pump membrane protein DJ564_RS14695 PF01513 ATP-NAD kinase DJ564_RS14700 PF00149 Calcineurin-like phosphoesterase DJ564_RS14705 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease DJ564_RS14705 PF01694 Rhomboid family DJ564_RS14710 PF07023 Protein of unknown function (DUF1315) DJ564_RS14720 PF11940 Domain of unknown function (DUF3458) Ig-like fold DJ564_RS14720 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DJ564_RS14720 PF01433 Peptidase family M1 domain DJ564_RS14750 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS14750 PF00155 Aminotransferase class I and II DJ564_RS14755 PF00920 Dehydratase family DJ564_RS14760 PF07690 Major Facilitator Superfamily DJ564_RS14775 PF00171 Aldehyde dehydrogenase family DJ564_RS14790 PF10282 Lactonase, 7-bladed beta-propeller DJ564_RS14820 PF00149 Calcineurin-like phosphoesterase DJ564_RS14820 PF12320 Type 5 capsule protein repressor C-terminal domain DJ564_RS14830 PF13519 von Willebrand factor type A domain DJ564_RS14845 PF01882 Protein of unknown function DUF58 DJ564_RS14850 PF17863 AAA lid domain DJ564_RS14850 PF07726 ATPase family associated with various cellular activities (AAA) DJ564_RS14860 PF05088 Bacterial NAD-glutamate dehydrogenase DJ564_RS14885 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS14885 PF00155 Aminotransferase class I and II DJ564_RS14890 PF02627 Carboxymuconolactone decarboxylase family DJ564_RS14900 PF00583 Acetyltransferase (GNAT) family DJ564_RS14905 PF01177 Asp/Glu/Hydantoin racemase DJ564_RS14910 PF14525 AraC-binding-like domain DJ564_RS14910 PF12833 Helix-turn-helix domain DJ564_RS14925 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ564_RS14940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJ564_RS14940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJ564_RS14955 PF11769 Protein of unknown function (DUF3313) DJ564_RS14980 PF03795 YCII-related domain DJ564_RS14985 PF06958 S-type Pyocin DJ564_RS14990 PF01320 Colicin immunity protein / pyocin immunity protein DJ564_RS15005 PF08534 Redoxin DJ564_RS15010 PF13533 Biotin-lipoyl like DJ564_RS15015 PF00873 AcrB/AcrD/AcrF family DJ564_RS15020 PF00873 AcrB/AcrD/AcrF family DJ564_RS15025 PF02321 Outer membrane efflux protein DJ564_RS15030 PF00563 EAL domain DJ564_RS15030 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS15030 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS15040 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS15040 PF00155 Aminotransferase class I and II DJ564_RS15045 PF13746 4Fe-4S dicluster domain DJ564_RS15045 PF12801 4Fe-4S binding domain DJ564_RS15045 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DJ564_RS15055 PF02308 MgtC family DJ564_RS15060 PF00128 Alpha amylase, catalytic domain DJ564_RS15060 PF11896 Domain of unknown function (DUF3416) DJ564_RS15065 PF00128 Alpha amylase, catalytic domain DJ564_RS15065 PF16657 Maltogenic Amylase, C-terminal domain DJ564_RS15070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ564_RS15070 PF02806 Alpha amylase, C-terminal all-beta domain DJ564_RS15070 PF00128 Alpha amylase, catalytic domain DJ564_RS15090 PF03372 Endonuclease/Exonuclease/phosphatase family DJ564_RS15120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ564_RS15120 PF00128 Alpha amylase, catalytic domain DJ564_RS15130 PF00128 Alpha amylase, catalytic domain DJ564_RS15135 PF02446 4-alpha-glucanotransferase DJ564_RS15140 PF00128 Alpha amylase, catalytic domain DJ564_RS15140 PF11941 Domain of unknown function (DUF3459) DJ564_RS15140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ564_RS15145 PF08323 Starch synthase catalytic domain DJ564_RS15145 PF00534 Glycosyl transferases group 1 DJ564_RS15150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ564_RS15150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ564_RS15150 PF01842 ACT domain DJ564_RS15155 PF00561 alpha/beta hydrolase fold DJ564_RS15160 PF09335 SNARE associated Golgi protein DJ564_RS15170 PF00672 HAMP domain DJ564_RS15170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS15180 PF00248 Aldo/keto reductase family DJ564_RS15185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS15185 PF03466 LysR substrate binding domain DJ564_RS15210 PF07690 Major Facilitator Superfamily DJ564_RS15225 PF01804 Penicillin amidase DJ564_RS15240 PF02615 Malate/L-lactate dehydrogenase DJ564_RS15255 PF03466 LysR substrate binding domain DJ564_RS15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS15260 PF00795 Carbon-nitrogen hydrolase DJ564_RS15270 PF00860 Permease family DJ564_RS15280 PF13416 Bacterial extracellular solute-binding protein DJ564_RS15285 PF00491 Arginase family DJ564_RS15290 PF00248 Aldo/keto reductase family DJ564_RS15305 PF03969 AFG1-like ATPase DJ564_RS15315 PF00583 Acetyltransferase (GNAT) family DJ564_RS15330 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS15330 PF07660 Secretin and TonB N terminus short domain DJ564_RS15330 PF00593 TonB dependent receptor DJ564_RS15335 PF00884 Sulfatase DJ564_RS15345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ564_RS15345 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DJ564_RS15350 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DJ564_RS15350 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DJ564_RS15360 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DJ564_RS15375 PF00158 Sigma-54 interaction domain DJ564_RS15375 PF00072 Response regulator receiver domain DJ564_RS15375 PF02954 Bacterial regulatory protein, Fis family DJ564_RS15420 PF17200 Single Cache domain 2 DJ564_RS15420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS15420 PF00672 HAMP domain DJ564_RS15425 PF02673 Bacitracin resistance protein BacA DJ564_RS15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS15440 PF03466 LysR substrate binding domain DJ564_RS15445 PF02525 Flavodoxin-like fold DJ564_RS15460 PF07690 Major Facilitator Superfamily DJ564_RS15465 PF00005 ABC transporter DJ564_RS15465 PF12848 ABC transporter DJ564_RS15475 PF02735 Ku70/Ku80 beta-barrel domain DJ564_RS15485 PF07995 Glucose / Sorbosone dehydrogenase DJ564_RS15500 PF08443 RimK-like ATP-grasp domain DJ564_RS15500 PF18030 RimK PreATP-grasp domain DJ564_RS15505 PF01544 CorA-like Mg2+ transporter protein DJ564_RS15515 PF00585 C-terminal regulatory domain of Threonine dehydratase DJ564_RS15515 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS15520 PF03974 Ecotin DJ564_RS15570 PF04717 Type VI secretion system, phage-baseplate injector DJ564_RS15575 PF00294 pfkB family carbohydrate kinase DJ564_RS15580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ564_RS15580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ564_RS15585 PF01232 Mannitol dehydrogenase Rossmann domain DJ564_RS15585 PF08125 Mannitol dehydrogenase C-terminal domain DJ564_RS15590 PF17912 MalK OB fold domain DJ564_RS15590 PF00005 ABC transporter DJ564_RS15595 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS15600 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS15610 PF12833 Helix-turn-helix domain DJ564_RS15630 PF00072 Response regulator receiver domain DJ564_RS15630 PF08448 PAS fold DJ564_RS15630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS15630 PF13188 PAS domain DJ564_RS15630 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS15635 PF00072 Response regulator receiver domain DJ564_RS15635 PF09308 LuxQ, periplasmic DJ564_RS15635 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS15635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS15640 PF01739 CheR methyltransferase, SAM binding domain DJ564_RS15640 PF03705 CheR methyltransferase, all-alpha domain DJ564_RS15645 PF01339 CheB methylesterase DJ564_RS15650 PF00072 Response regulator receiver domain DJ564_RS15650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DJ564_RS15650 PF01627 Hpt domain DJ564_RS15650 PF00672 HAMP domain DJ564_RS15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS15650 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS15655 PF00072 Response regulator receiver domain DJ564_RS15655 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS15660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS15660 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS15660 PF08448 PAS fold DJ564_RS15660 PF00072 Response regulator receiver domain DJ564_RS15660 PF13188 PAS domain DJ564_RS15665 PF06745 KaiC DJ564_RS15675 PF04632 Fusaric acid resistance protein family DJ564_RS15685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS15685 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS15690 PF02321 Outer membrane efflux protein DJ564_RS15695 PF00873 AcrB/AcrD/AcrF family DJ564_RS15700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS15705 PF03466 LysR substrate binding domain DJ564_RS15705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS15710 PF16197 Ketoacyl-synthetase C-terminal extension DJ564_RS15710 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ564_RS15710 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS15710 PF14765 Polyketide synthase dehydratase DJ564_RS15710 PF08659 KR domain DJ564_RS15710 PF00698 Acyl transferase domain DJ564_RS15710 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ564_RS15710 PF00550 Phosphopantetheine attachment site DJ564_RS15720 PF00155 Aminotransferase class I and II DJ564_RS15720 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS15725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJ564_RS15725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJ564_RS15725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJ564_RS15725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJ564_RS15730 PF17954 Quercetinase C-terminal cupin domain DJ564_RS15730 PF02678 Pirin DJ564_RS15735 PF13361 UvrD-like helicase C-terminal domain DJ564_RS15735 PF00580 UvrD/REP helicase N-terminal domain DJ564_RS15750 PF01266 FAD dependent oxidoreductase DJ564_RS15760 PF13416 Bacterial extracellular solute-binding protein DJ564_RS15770 PF08548 Peptidase M10 serralysin C terminal DJ564_RS15770 PF00413 Matrixin DJ564_RS15770 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DJ564_RS15775 PF02974 Protease inhibitor Inh DJ564_RS15780 PF00664 ABC transporter transmembrane region DJ564_RS15780 PF00005 ABC transporter DJ564_RS15785 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS15790 PF02321 Outer membrane efflux protein DJ564_RS15795 PF03797 Autotransporter beta-domain DJ564_RS15795 PF12951 Passenger-associated-transport-repeat DJ564_RS15795 PF00082 Subtilase family DJ564_RS15800 PF12951 Passenger-associated-transport-repeat DJ564_RS15800 PF00082 Subtilase family DJ564_RS15800 PF03797 Autotransporter beta-domain DJ564_RS15805 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DJ564_RS15810 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DJ564_RS15825 PF18081 Fanconi anemia-associated nuclease SAP domain DJ564_RS15825 PF08774 VRR-NUC domain DJ564_RS15830 PF00929 Exonuclease DJ564_RS15830 PF04851 Type III restriction enzyme, res subunit DJ564_RS15830 PF13307 Helicase C-terminal domain DJ564_RS15845 PF00072 Response regulator receiver domain DJ564_RS15845 PF13188 PAS domain DJ564_RS15845 PF08448 PAS fold DJ564_RS15845 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS15845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS15870 PF00999 Sodium/hydrogen exchanger family DJ564_RS15875 PF04893 Yip1 domain DJ564_RS15885 PF00155 Aminotransferase class I and II DJ564_RS15890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ564_RS15890 PF00384 Molybdopterin oxidoreductase DJ564_RS15890 PF01568 Molydopterin dinucleotide binding domain DJ564_RS15895 PF01568 Molydopterin dinucleotide binding domain DJ564_RS15895 PF00384 Molybdopterin oxidoreductase DJ564_RS15895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ564_RS15900 PF09163 Formate dehydrogenase N, transmembrane DJ564_RS15900 PF13247 4Fe-4S dicluster domain DJ564_RS15905 PF01292 Prokaryotic cytochrome b561 DJ564_RS15910 PF04216 Protein involved in formate dehydrogenase formation DJ564_RS15915 PF03841 L-seryl-tRNA selenium transferase DJ564_RS15915 PF12390 Selenocysteine synthase N terminal DJ564_RS15920 PF00009 Elongation factor Tu GTP binding domain DJ564_RS15920 PF03144 Elongation factor Tu domain 2 DJ564_RS15920 PF09106 Elongation factor SelB, winged helix DJ564_RS15920 PF09107 Elongation factor SelB, winged helix DJ564_RS15930 PF03573 outer membrane porin, OprD family DJ564_RS15935 PF00857 Isochorismatase family DJ564_RS15940 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DJ564_RS15945 PF00108 Thiolase, N-terminal domain DJ564_RS15945 PF02803 Thiolase, C-terminal domain DJ564_RS15950 PF00106 short chain dehydrogenase DJ564_RS15955 PF12833 Helix-turn-helix domain DJ564_RS15955 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DJ564_RS15960 PF11339 Protein of unknown function (DUF3141) DJ564_RS15970 PF07879 PHB/PHA accumulation regulator DNA-binding domain DJ564_RS15970 PF05233 PHB accumulation regulatory domain DJ564_RS15975 PF03573 outer membrane porin, OprD family DJ564_RS15980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS15980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS15980 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS15980 PF12806 Acetyl-CoA dehydrogenase C-terminal like DJ564_RS15985 PF00474 Sodium:solute symporter family DJ564_RS15995 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS15995 PF00501 AMP-binding enzyme DJ564_RS16005 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS16005 PF00989 PAS fold DJ564_RS16005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS16010 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS16010 PF00072 Response regulator receiver domain DJ564_RS16015 PF01594 AI-2E family transporter DJ564_RS16035 PF01266 FAD dependent oxidoreductase DJ564_RS16045 PF00120 Glutamine synthetase, catalytic domain DJ564_RS16050 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJ564_RS16050 PF04324 BFD-like [2Fe-2S] binding domain DJ564_RS16050 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS16050 PF18267 Rubredoxin NAD+ reductase C-terminal domain DJ564_RS16050 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJ564_RS16050 PF13806 Rieske-like [2Fe-2S] domain DJ564_RS16055 PF18267 Rubredoxin NAD+ reductase C-terminal domain DJ564_RS16055 PF13806 Rieske-like [2Fe-2S] domain DJ564_RS16055 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS16055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJ564_RS16055 PF04324 BFD-like [2Fe-2S] binding domain DJ564_RS16055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJ564_RS16070 PF01266 FAD dependent oxidoreductase DJ564_RS16075 PF00171 Aldehyde dehydrogenase family DJ564_RS16080 PF00701 Dihydrodipicolinate synthetase family DJ564_RS16085 PF05544 Proline racemase DJ564_RS16090 PF13520 Amino acid permease DJ564_RS16095 PF12833 Helix-turn-helix domain DJ564_RS16095 PF01497 Periplasmic binding protein DJ564_RS16100 PF02223 Thymidylate kinase DJ564_RS16115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ564_RS16115 PF00356 Bacterial regulatory proteins, lacI family DJ564_RS16120 PF00251 Glycosyl hydrolases family 32 N-terminal domain DJ564_RS16120 PF08244 Glycosyl hydrolases family 32 C terminal DJ564_RS16125 PF17912 MalK OB fold domain DJ564_RS16125 PF00005 ABC transporter DJ564_RS16130 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS16135 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS16140 PF01547 Bacterial extracellular solute-binding protein DJ564_RS16145 PF02264 LamB porin DJ564_RS16145 PF11471 Maltoporin periplasmic N-terminal extension DJ564_RS16180 PF13817 IS66 C-terminal element DJ564_RS16180 PF03050 Transposase IS66 family DJ564_RS16180 PF13007 Transposase C of IS166 homeodomain DJ564_RS16180 PF13005 zinc-finger binding domain of transposase IS66 DJ564_RS16235 PF01695 IstB-like ATP binding protein DJ564_RS16240 PF00665 Integrase core domain DJ564_RS16250 PF09722 Protein of unknown function (DUF2384) DJ564_RS16270 PF00717 Peptidase S24-like DJ564_RS16275 PF11799 impB/mucB/samB family C-terminal domain DJ564_RS16275 PF00817 impB/mucB/samB family DJ564_RS16275 PF13438 Domain of unknown function (DUF4113) DJ564_RS16285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS16285 PF03466 LysR substrate binding domain DJ564_RS16295 PF00375 Sodium:dicarboxylate symporter family DJ564_RS16300 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS16300 PF16925 Tetracyclin repressor-like, C-terminal domain DJ564_RS16305 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ564_RS16310 PF00106 short chain dehydrogenase DJ564_RS16325 PF13460 NAD(P)H-binding DJ564_RS16340 PF01638 HxlR-like helix-turn-helix DJ564_RS16345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ564_RS16355 PF07859 alpha/beta hydrolase fold DJ564_RS16370 PF04239 Protein of unknown function (DUF421) DJ564_RS16400 PF06745 KaiC DJ564_RS16420 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS16420 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS16420 PF00563 EAL domain DJ564_RS16430 PF00563 EAL domain DJ564_RS16430 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS16430 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS16430 PF13188 PAS domain DJ564_RS16450 PF17158 Membrane-associated sensor, integral membrane domain DJ564_RS16450 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS16460 PF00072 Response regulator receiver domain DJ564_RS16460 PF13426 PAS domain DJ564_RS16460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS16470 PF01590 GAF domain DJ564_RS16470 PF00563 EAL domain DJ564_RS16470 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS16470 PF00360 Phytochrome region DJ564_RS16475 PF13426 PAS domain DJ564_RS16475 PF08447 PAS fold DJ564_RS16475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS16485 PF00576 HIUase/Transthyretin family DJ564_RS16495 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS16495 PF00072 Response regulator receiver domain DJ564_RS16500 PF00672 HAMP domain DJ564_RS16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS16500 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS16505 PF00563 EAL domain DJ564_RS16505 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS16505 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS16520 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DJ564_RS16530 PF00106 short chain dehydrogenase DJ564_RS16535 PF01227 GTP cyclohydrolase I DJ564_RS16545 PF00672 HAMP domain DJ564_RS16545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS16545 PF17200 Single Cache domain 2 DJ564_RS16575 PF03824 High-affinity nickel-transport protein DJ564_RS16600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS16600 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS16605 PF00873 AcrB/AcrD/AcrF family DJ564_RS16610 PF11604 Copper binding periplasmic protein CusF DJ564_RS16655 PF08676 MutL C terminal dimerisation domain DJ564_RS16655 PF01119 DNA mismatch repair protein, C-terminal domain DJ564_RS16690 PF06470 SMC proteins Flexible Hinge Domain DJ564_RS16690 PF02463 RecF/RecN/SMC N terminal domain DJ564_RS16695 PF00580 UvrD/REP helicase N-terminal domain DJ564_RS16695 PF13361 UvrD-like helicase C-terminal domain DJ564_RS16695 PF12705 PD-(D/E)XK nuclease superfamily DJ564_RS16745 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS16745 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS16745 PF00563 EAL domain DJ564_RS16760 PF07044 Protein of unknown function (DUF1329) DJ564_RS16780 PF03601 Conserved hypothetical protein 698 DJ564_RS16785 PF00355 Rieske [2Fe-2S] domain DJ564_RS16795 PF00083 Sugar (and other) transporter DJ564_RS16800 PF05853 beta-keto acid cleavage enzyme DJ564_RS16805 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DJ564_RS16810 PF00107 Zinc-binding dehydrogenase DJ564_RS16810 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS16815 PF03976 Polyphosphate kinase 2 (PPK2) DJ564_RS16820 PF00916 Sulfate permease family DJ564_RS16820 PF01740 STAS domain DJ564_RS16825 PF04328 Selenoprotein, putative DJ564_RS16830 PF13722 5TM C-terminal transporter carbon starvation CstA DJ564_RS16830 PF02554 Carbon starvation protein CstA DJ564_RS16840 PF17200 Single Cache domain 2 DJ564_RS16840 PF07730 Histidine kinase DJ564_RS16845 PF00072 Response regulator receiver domain DJ564_RS16845 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS16855 PF02321 Outer membrane efflux protein DJ564_RS16860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS16860 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS16880 PF12794 Mechanosensitive ion channel inner membrane domain 1 DJ564_RS16880 PF12795 Mechanosensitive ion channel porin domain DJ564_RS16880 PF00924 Mechanosensitive ion channel DJ564_RS16885 PF14525 AraC-binding-like domain DJ564_RS16885 PF12833 Helix-turn-helix domain DJ564_RS16890 PF00120 Glutamine synthetase, catalytic domain DJ564_RS16895 PF13416 Bacterial extracellular solute-binding protein DJ564_RS16900 PF01266 FAD dependent oxidoreductase DJ564_RS16915 PF04403 Paraquat-inducible protein A DJ564_RS16920 PF02470 MlaD protein DJ564_RS16935 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS16940 PF08402 TOBE domain DJ564_RS16940 PF00005 ABC transporter DJ564_RS16945 PF02899 Phage integrase, N-terminal SAM-like domain DJ564_RS16945 PF00589 Phage integrase family DJ564_RS16950 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ564_RS16955 PF00535 Glycosyl transferase family 2 DJ564_RS16960 PF01370 NAD dependent epimerase/dehydratase family DJ564_RS16960 PF00551 Formyl transferase DJ564_RS16960 PF02911 Formyl transferase, C-terminal domain DJ564_RS16965 PF01522 Polysaccharide deacetylase DJ564_RS16970 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DJ564_RS16975 PF00892 EamA-like transporter family DJ564_RS16980 PF00893 Small Multidrug Resistance protein DJ564_RS16985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ564_RS16985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ564_RS16985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ564_RS16990 PF00583 Acetyltransferase (GNAT) family DJ564_RS16995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS16995 PF03466 LysR substrate binding domain DJ564_RS17000 PF00206 Lyase DJ564_RS17000 PF14698 Argininosuccinate lyase C-terminal DJ564_RS17005 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS17010 PF00005 ABC transporter DJ564_RS17015 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS17035 PF07690 Major Facilitator Superfamily DJ564_RS17060 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS17065 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS17065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS17065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS17070 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS17075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS17075 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS17075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS17085 PF00108 Thiolase, N-terminal domain DJ564_RS17085 PF02803 Thiolase, C-terminal domain DJ564_RS17090 PF00106 short chain dehydrogenase DJ564_RS17095 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS17095 PF00501 AMP-binding enzyme DJ564_RS17100 PF12833 Helix-turn-helix domain DJ564_RS17110 PF03239 Iron permease FTR1 family DJ564_RS17115 PF09375 Imelysin DJ564_RS17115 PF13473 Cupredoxin-like domain DJ564_RS17120 PF04261 Dyp-type peroxidase family DJ564_RS17125 PF13473 Cupredoxin-like domain DJ564_RS17125 PF09375 Imelysin DJ564_RS17135 PF13091 PLD-like domain DJ564_RS17155 PF00296 Luciferase-like monooxygenase DJ564_RS17160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS17160 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS17165 PF01925 Sulfite exporter TauE/SafE DJ564_RS17170 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DJ564_RS17170 PF00293 NUDIX domain DJ564_RS17170 PF09297 NADH pyrophosphatase zinc ribbon domain DJ564_RS17175 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS17180 PF08241 Methyltransferase domain DJ564_RS17185 PF01292 Prokaryotic cytochrome b561 DJ564_RS17195 PF08281 Sigma-70, region 4 DJ564_RS17195 PF04542 Sigma-70 region 2 DJ564_RS17205 PF00857 Isochorismatase family DJ564_RS17220 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS17220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS17220 PF00672 HAMP domain DJ564_RS17225 PF00072 Response regulator receiver domain DJ564_RS17225 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS17230 PF00529 HlyD membrane-fusion protein of T1SS DJ564_RS17230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS17235 PF00873 AcrB/AcrD/AcrF family DJ564_RS17270 PF00356 Bacterial regulatory proteins, lacI family DJ564_RS17280 PF00294 pfkB family carbohydrate kinase DJ564_RS17285 PF07690 Major Facilitator Superfamily DJ564_RS17290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ564_RS17290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ564_RS17295 PF00155 Aminotransferase class I and II DJ564_RS17310 PF02595 Glycerate kinase family DJ564_RS17315 PF13556 PucR C-terminal helix-turn-helix domain DJ564_RS17315 PF17853 GGDEF-like domain DJ564_RS17315 PF05651 Putative sugar diacid recognition DJ564_RS17320 PF07690 Major Facilitator Superfamily DJ564_RS17330 PF00248 Aldo/keto reductase family DJ564_RS17335 PF00892 EamA-like transporter family DJ564_RS17340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ564_RS17345 PF00892 EamA-like transporter family DJ564_RS17350 PF03466 LysR substrate binding domain DJ564_RS17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS17355 PF12792 CSS motif domain associated with EAL DJ564_RS17355 PF00563 EAL domain DJ564_RS17370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ564_RS17375 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS17375 PF13192 Thioredoxin domain DJ564_RS17380 PF00578 AhpC/TSA family DJ564_RS17380 PF10417 C-terminal domain of 1-Cys peroxiredoxin DJ564_RS17395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ564_RS17395 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS17400 PF00483 Nucleotidyl transferase DJ564_RS17430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJ564_RS17430 PF12833 Helix-turn-helix domain DJ564_RS17430 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJ564_RS17430 PF02805 Metal binding domain of Ada DJ564_RS17435 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA DJ564_RS17440 PF13532 2OG-Fe(II) oxygenase superfamily DJ564_RS17445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJ564_RS17445 PF02805 Metal binding domain of Ada DJ564_RS17445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJ564_RS17445 PF12833 Helix-turn-helix domain DJ564_RS17450 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS17450 PF00107 Zinc-binding dehydrogenase DJ564_RS17455 PF03060 Nitronate monooxygenase DJ564_RS17465 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS17470 PF00005 ABC transporter DJ564_RS17470 PF03459 TOBE domain DJ564_RS17500 PF05368 NmrA-like family DJ564_RS17510 PF09957 Bacterial antitoxin of type II TA system, VapB DJ564_RS17545 PF01047 MarR family DJ564_RS17555 PF02630 SCO1/SenC DJ564_RS17610 PF13614 AAA domain DJ564_RS17640 PF00224 Pyruvate kinase, barrel domain DJ564_RS17640 PF02887 Pyruvate kinase, alpha/beta domain DJ564_RS17655 PF02371 Transposase IS116/IS110/IS902 family DJ564_RS17655 PF01548 Transposase DJ564_RS17670 PF04542 Sigma-70 region 2 DJ564_RS17670 PF08281 Sigma-70, region 4 DJ564_RS17680 PF05114 Protein of unknown function (DUF692) DJ564_RS17720 PF00561 alpha/beta hydrolase fold DJ564_RS17730 PF00175 Oxidoreductase NAD-binding domain DJ564_RS17730 PF00042 Globin DJ564_RS17730 PF00970 Oxidoreductase FAD-binding domain DJ564_RS17745 PF12833 Helix-turn-helix domain DJ564_RS17750 PF12833 Helix-turn-helix domain DJ564_RS17750 PF14525 AraC-binding-like domain DJ564_RS17755 PF00857 Isochorismatase family DJ564_RS17760 PF00199 Catalase DJ564_RS17760 PF06628 Catalase-related immune-responsive DJ564_RS17775 PF03475 3-alpha domain DJ564_RS17775 PF03473 MOSC domain DJ564_RS17830 PF01726 LexA DNA binding domain DJ564_RS17830 PF00717 Peptidase S24-like DJ564_RS17850 PF10137 Predicted nucleotide-binding protein containing TIR-like domain DJ564_RS17920 PF01066 CDP-alcohol phosphatidyltransferase DJ564_RS17925 PF01541 GIY-YIG catalytic domain DJ564_RS17925 PF02151 UvrB/uvrC motif DJ564_RS17925 PF08459 UvrC Helix-hairpin-helix N-terminal DJ564_RS17930 PF00072 Response regulator receiver domain DJ564_RS17930 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS17940 PF00793 DAHP synthetase I family DJ564_RS17945 PF00561 alpha/beta hydrolase fold DJ564_RS17950 PF05698 Bacterial trigger factor protein (TF) C-terminus DJ564_RS17955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ564_RS17960 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS17965 PF12911 N-terminal TM domain of oligopeptide transport permease C DJ564_RS17965 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS17970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ564_RS17970 PF00005 ABC transporter DJ564_RS17975 PF02954 Bacterial regulatory protein, Fis family DJ564_RS17975 PF01590 GAF domain DJ564_RS17975 PF00158 Sigma-54 interaction domain DJ564_RS17985 PF00106 short chain dehydrogenase DJ564_RS17990 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS17990 PF00501 AMP-binding enzyme DJ564_RS18000 PF00437 Type II/IV secretion system protein DJ564_RS18005 PF13188 PAS domain DJ564_RS18005 PF08448 PAS fold DJ564_RS18005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS18005 PF00072 Response regulator receiver domain DJ564_RS18005 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS18015 PF00294 pfkB family carbohydrate kinase DJ564_RS18035 PF00005 ABC transporter DJ564_RS18040 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS18045 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS18050 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS18065 PF03471 Transporter associated domain DJ564_RS18065 PF03741 Integral membrane protein TerC family DJ564_RS18065 PF00571 CBS domain DJ564_RS18070 PF03466 LysR substrate binding domain DJ564_RS18070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS18075 PF07690 Major Facilitator Superfamily DJ564_RS18090 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS18090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ564_RS18095 PF00205 Thiamine pyrophosphate enzyme, central domain DJ564_RS18095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ564_RS18095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ564_RS18110 PF17863 AAA lid domain DJ564_RS18110 PF07728 AAA domain (dynein-related subfamily) DJ564_RS18110 PF13519 von Willebrand factor type A domain DJ564_RS18115 PF02514 CobN/Magnesium Chelatase DJ564_RS18120 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ564_RS18120 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ564_RS18135 PF01890 Cobalamin synthesis G C-terminus DJ564_RS18140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ564_RS18145 PF01106 NifU-like domain DJ564_RS18145 PF01521 Iron-sulphur cluster biosynthesis DJ564_RS18150 PF01757 Acyltransferase family DJ564_RS18160 PF02310 B12 binding domain DJ564_RS18160 PF02607 B12 binding domain DJ564_RS18160 PF00809 Pterin binding enzyme DJ564_RS18160 PF02965 Vitamin B12 dependent methionine synthase, activation domain DJ564_RS18160 PF02574 Homocysteine S-methyltransferase DJ564_RS18175 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJ564_RS18175 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJ564_RS18190 PF08496 Peptidase family S49 N-terminal DJ564_RS18190 PF01343 Peptidase family S49 DJ564_RS18205 PF07969 Amidohydrolase family DJ564_RS18220 PF03466 LysR substrate binding domain DJ564_RS18220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS18255 PF01740 STAS domain DJ564_RS18255 PF08678 Rsbr N terminal DJ564_RS18260 PF01740 STAS domain DJ564_RS18265 PF13581 Histidine kinase-like ATPase domain DJ564_RS18275 PF00672 HAMP domain DJ564_RS18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS18275 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS18275 PF01627 Hpt domain DJ564_RS18275 PF00072 Response regulator receiver domain DJ564_RS18275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DJ564_RS18280 PF13426 PAS domain DJ564_RS18280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS18280 PF00072 Response regulator receiver domain DJ564_RS18285 PF17755 UvrA DNA-binding domain DJ564_RS18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS18290 PF13426 PAS domain DJ564_RS18290 PF00072 Response regulator receiver domain DJ564_RS18300 PF05643 Putative bacterial lipoprotein (DUF799) DJ564_RS18310 PF03783 Curli production assembly/transport component CsgG DJ564_RS18315 PF14579 Helix-hairpin-helix motif DJ564_RS18315 PF01336 OB-fold nucleic acid binding domain DJ564_RS18315 PF02811 PHP domain DJ564_RS18315 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ564_RS18315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ564_RS18330 PF00717 Peptidase S24-like DJ564_RS18330 PF01726 LexA DNA binding domain DJ564_RS18335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS18335 PF03466 LysR substrate binding domain DJ564_RS18340 PF01979 Amidohydrolase family DJ564_RS18355 PF01266 FAD dependent oxidoreductase DJ564_RS18360 PF07690 Major Facilitator Superfamily DJ564_RS18365 PF00106 short chain dehydrogenase DJ564_RS18370 PF00465 Iron-containing alcohol dehydrogenase DJ564_RS18385 PF03466 LysR substrate binding domain DJ564_RS18385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS18390 PF00171 Aldehyde dehydrogenase family DJ564_RS18400 PF01965 DJ-1/PfpI family DJ564_RS18400 PF12833 Helix-turn-helix domain DJ564_RS18410 PF00690 Cation transporter/ATPase, N-terminus DJ564_RS18410 PF00689 Cation transporting ATPase, C-terminus DJ564_RS18415 PF02690 Na+/Pi-cotransporter DJ564_RS18430 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS18435 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS18440 PF00005 ABC transporter DJ564_RS18450 PF00324 Amino acid permease DJ564_RS18455 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS18455 PF00155 Aminotransferase class I and II DJ564_RS18460 PF01266 FAD dependent oxidoreductase DJ564_RS18465 PF01042 Endoribonuclease L-PSP DJ564_RS18475 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS18480 PF00106 short chain dehydrogenase DJ564_RS18485 PF01965 DJ-1/PfpI family DJ564_RS18485 PF12833 Helix-turn-helix domain DJ564_RS18495 PF13419 Haloacid dehalogenase-like hydrolase DJ564_RS18510 PF02926 THUMP domain DJ564_RS18510 PF01170 Putative RNA methylase family UPF0020 DJ564_RS18510 PF10672 S-adenosylmethionine-dependent methyltransferase DJ564_RS18520 PF13416 Bacterial extracellular solute-binding protein DJ564_RS18530 PF03576 Peptidase family S58 DJ564_RS18540 PF01638 HxlR-like helix-turn-helix DJ564_RS18550 PF02566 OsmC-like protein DJ564_RS18555 PF02566 OsmC-like protein DJ564_RS18560 PF02566 OsmC-like protein DJ564_RS18565 PF01625 Peptide methionine sulfoxide reductase DJ564_RS18570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS18570 PF03466 LysR substrate binding domain DJ564_RS18575 PF00171 Aldehyde dehydrogenase family DJ564_RS18585 PF00248 Aldo/keto reductase family DJ564_RS18605 PF01370 NAD dependent epimerase/dehydratase family DJ564_RS18625 PF13614 AAA domain DJ564_RS18630 PF02397 Bacterial sugar transferase DJ564_RS18635 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ564_RS18635 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ564_RS18635 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ564_RS18645 PF00534 Glycosyl transferases group 1 DJ564_RS18645 PF13439 Glycosyltransferase Family 4 DJ564_RS18650 PF13439 Glycosyltransferase Family 4 DJ564_RS18650 PF00534 Glycosyl transferases group 1 DJ564_RS18660 PF00535 Glycosyl transferase family 2 DJ564_RS18670 PF16363 GDP-mannose 4,6 dehydratase DJ564_RS18700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS18700 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS18700 PF13493 Domain of unknown function (DUF4118) DJ564_RS18700 PF13426 PAS domain DJ564_RS18700 PF08447 PAS fold DJ564_RS18700 PF00989 PAS fold DJ564_RS18705 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS18705 PF00072 Response regulator receiver domain DJ564_RS18710 PF00072 Response regulator receiver domain DJ564_RS18710 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS18720 PF07690 Major Facilitator Superfamily DJ564_RS18725 PF03466 LysR substrate binding domain DJ564_RS18725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS18735 PF00920 Dehydratase family DJ564_RS18740 PF00672 HAMP domain DJ564_RS18740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS18785 PF02464 Competence-damaged protein DJ564_RS18815 PF00141 Peroxidase DJ564_RS18825 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS18825 PF00593 TonB dependent receptor DJ564_RS18835 PF03328 HpcH/HpaI aldolase/citrate lyase family DJ564_RS18840 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DJ564_RS18845 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS18850 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain DJ564_RS18855 PF06276 Ferric iron reductase FhuF-like transporter DJ564_RS18855 PF04183 IucA / IucC family DJ564_RS18860 PF07690 Major Facilitator Superfamily DJ564_RS18865 PF00266 Aminotransferase class-V DJ564_RS18870 PF04542 Sigma-70 region 2 DJ564_RS18870 PF08281 Sigma-70, region 4 DJ564_RS18875 PF04773 FecR protein DJ564_RS18875 PF16220 Domain of unknown function (DUF4880) DJ564_RS18880 PF00593 TonB dependent receptor DJ564_RS18880 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS18890 PF01032 FecCD transport family DJ564_RS18895 PF00005 ABC transporter DJ564_RS18905 PF00857 Isochorismatase family DJ564_RS18915 PF03073 TspO/MBR family DJ564_RS18925 PF01638 HxlR-like helix-turn-helix DJ564_RS18930 PF07690 Major Facilitator Superfamily DJ564_RS18950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ564_RS18955 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain DJ564_RS18955 PF06165 Glycosyltransferase family 36 DJ564_RS18955 PF10091 Putative glucoamylase DJ564_RS18965 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DJ564_RS18970 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS18970 PF00501 AMP-binding enzyme DJ564_RS18975 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJ564_RS18990 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS18995 PF01494 FAD binding domain DJ564_RS19000 PF17831 Pyruvate dehydrogenase E1 component middle domain DJ564_RS19000 PF00456 Transketolase, thiamine diphosphate binding domain DJ564_RS19010 PF03466 LysR substrate binding domain DJ564_RS19010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS19055 PF00171 Aldehyde dehydrogenase family DJ564_RS19060 PF05199 GMC oxidoreductase DJ564_RS19060 PF00732 GMC oxidoreductase DJ564_RS19065 PF03466 LysR substrate binding domain DJ564_RS19065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS19070 PF00732 GMC oxidoreductase DJ564_RS19070 PF05199 GMC oxidoreductase DJ564_RS19080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS19080 PF03466 LysR substrate binding domain DJ564_RS19085 PF01678 Diaminopimelate epimerase DJ564_RS19120 PF06039 Malate:quinone oxidoreductase (Mqo) DJ564_RS19140 PF17151 Periplasmic sensor domain DJ564_RS19140 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS19150 PF04264 YceI-like domain DJ564_RS19170 PF01554 MatE DJ564_RS19180 PF00005 ABC transporter DJ564_RS19180 PF00664 ABC transporter transmembrane region DJ564_RS19215 PF03466 LysR substrate binding domain DJ564_RS19215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS19220 PF02525 Flavodoxin-like fold DJ564_RS19240 PF04143 Sulphur transport DJ564_RS19250 PF01925 Sulfite exporter TauE/SafE DJ564_RS19260 PF00753 Metallo-beta-lactamase superfamily DJ564_RS19265 PF13185 GAF domain DJ564_RS19265 PF02954 Bacterial regulatory protein, Fis family DJ564_RS19265 PF00158 Sigma-54 interaction domain DJ564_RS19270 PF01654 Cytochrome bd terminal oxidase subunit I DJ564_RS19275 PF02322 Cytochrome bd terminal oxidase subunit II DJ564_RS19295 PF13091 PLD-like domain DJ564_RS19295 PF13396 Phospholipase_D-nuclease N-terminal DJ564_RS19300 PF01638 HxlR-like helix-turn-helix DJ564_RS19305 PF00795 Carbon-nitrogen hydrolase DJ564_RS19325 PF05139 Erythromycin esterase DJ564_RS19325 PF00156 Phosphoribosyl transferase domain DJ564_RS19335 PF00690 Cation transporter/ATPase, N-terminus DJ564_RS19335 PF00689 Cation transporting ATPase, C-terminus DJ564_RS19365 PF00156 Phosphoribosyl transferase domain DJ564_RS19365 PF05139 Erythromycin esterase DJ564_RS19370 PF00582 Universal stress protein family DJ564_RS19375 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DJ564_RS19375 PF09363 XFP C-terminal domain DJ564_RS19375 PF09364 XFP N-terminal domain DJ564_RS19385 PF13545 Crp-like helix-turn-helix domain DJ564_RS19385 PF00027 Cyclic nucleotide-binding domain DJ564_RS19390 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS19405 PF00582 Universal stress protein family DJ564_RS19420 PF09722 Protein of unknown function (DUF2384) DJ564_RS19440 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS19445 PF00106 short chain dehydrogenase DJ564_RS19450 PF00561 alpha/beta hydrolase fold DJ564_RS19455 PF06441 Epoxide hydrolase N terminus DJ564_RS19480 PF03825 Nucleoside H+ symporter DJ564_RS19490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ564_RS19490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ564_RS19495 PF00356 Bacterial regulatory proteins, lacI family DJ564_RS19500 PF00072 Response regulator receiver domain DJ564_RS19500 PF13426 PAS domain DJ564_RS19500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS19515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS19515 PF16736 Single Cache-like DJ564_RS19515 PF00989 PAS fold DJ564_RS19515 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS19520 PF06745 KaiC DJ564_RS19615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS19615 PF03466 LysR substrate binding domain DJ564_RS19620 PF01817 Chorismate mutase type II DJ564_RS19635 PF00107 Zinc-binding dehydrogenase DJ564_RS19635 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS19645 PF01047 MarR family DJ564_RS19650 PF06441 Epoxide hydrolase N terminus DJ564_RS19655 PF03466 LysR substrate binding domain DJ564_RS19655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS19665 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DJ564_RS19680 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS19680 PF00107 Zinc-binding dehydrogenase DJ564_RS19695 PF01590 GAF domain DJ564_RS19695 PF00563 EAL domain DJ564_RS19695 PF00360 Phytochrome region DJ564_RS19695 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS19700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS19700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DJ564_RS19700 PF00072 Response regulator receiver domain DJ564_RS19700 PF01627 Hpt domain DJ564_RS19700 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS19700 PF00672 HAMP domain DJ564_RS19715 PF17912 MalK OB fold domain DJ564_RS19715 PF00005 ABC transporter DJ564_RS19720 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS19725 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS19735 PF12833 Helix-turn-helix domain DJ564_RS19740 PF00294 pfkB family carbohydrate kinase DJ564_RS19755 PF04371 Porphyromonas-type peptidyl-arginine deiminase DJ564_RS19760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS19760 PF03466 LysR substrate binding domain DJ564_RS19765 PF02350 UDP-N-acetylglucosamine 2-epimerase DJ564_RS19775 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DJ564_RS19775 PF13632 Glycosyl transferase family group 2 DJ564_RS19815 PF00034 Cytochrome c DJ564_RS19825 PF03435 Saccharopine dehydrogenase NADP binding domain DJ564_RS19840 PF12833 Helix-turn-helix domain DJ564_RS19840 PF06719 AraC-type transcriptional regulator N-terminus DJ564_RS19845 PF13378 Enolase C-terminal domain-like DJ564_RS19845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ564_RS19850 PF07690 Major Facilitator Superfamily DJ564_RS19855 PF03466 LysR substrate binding domain DJ564_RS19855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS19860 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS19870 PF07690 Major Facilitator Superfamily DJ564_RS19875 PF00561 alpha/beta hydrolase fold DJ564_RS19880 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DJ564_RS19895 PF02541 Ppx/GppA phosphatase family DJ564_RS19900 PF03976 Polyphosphate kinase 2 (PPK2) DJ564_RS19905 PF04134 Protein of unknown function, DUF393 DJ564_RS19920 PF00561 alpha/beta hydrolase fold DJ564_RS19965 PF00593 TonB dependent receptor DJ564_RS19965 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS19985 PF02525 Flavodoxin-like fold DJ564_RS19990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS19990 PF12806 Acetyl-CoA dehydrogenase C-terminal like DJ564_RS19990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS19990 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS20005 PF07044 Protein of unknown function (DUF1329) DJ564_RS20020 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DJ564_RS20020 PF12833 Helix-turn-helix domain DJ564_RS20025 PF05853 beta-keto acid cleavage enzyme DJ564_RS20035 PF00355 Rieske [2Fe-2S] domain DJ564_RS20040 PF00501 AMP-binding enzyme DJ564_RS20040 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS20045 PF03601 Conserved hypothetical protein 698 DJ564_RS20090 PF03466 LysR substrate binding domain DJ564_RS20090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS20100 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DJ564_RS20140 PF00005 ABC transporter DJ564_RS20145 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS20150 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS20160 PF01425 Amidase DJ564_RS20165 PF04107 Glutamate-cysteine ligase family 2(GCS2) DJ564_RS20170 PF02535 ZIP Zinc transporter DJ564_RS20175 PF03573 outer membrane porin, OprD family DJ564_RS20180 PF02447 GntP family permease DJ564_RS20185 PF01042 Endoribonuclease L-PSP DJ564_RS20195 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS20195 PF13977 BetI-type transcriptional repressor, C-terminal DJ564_RS20200 PF00892 EamA-like transporter family DJ564_RS20205 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS20210 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS20215 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS20220 PF00155 Aminotransferase class I and II DJ564_RS20235 PF07729 FCD domain DJ564_RS20235 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS20240 PF01565 FAD binding domain DJ564_RS20240 PF02913 FAD linked oxidases, C-terminal domain DJ564_RS20245 PF01565 FAD binding domain DJ564_RS20250 PF13183 4Fe-4S dicluster domain DJ564_RS20250 PF02754 Cysteine-rich domain DJ564_RS20255 PF03928 Haem-degrading DJ564_RS20265 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS20270 PF01427 D-ala-D-ala dipeptidase DJ564_RS20280 PF01066 CDP-alcohol phosphatidyltransferase DJ564_RS20300 PF08241 Methyltransferase domain DJ564_RS20310 PF12852 Cupin DJ564_RS20310 PF12833 Helix-turn-helix domain DJ564_RS20315 PF02683 Cytochrome C biogenesis protein transmembrane region DJ564_RS20315 PF17991 Thioredoxin like C-terminal domain DJ564_RS20315 PF00578 AhpC/TSA family DJ564_RS20330 PF00072 Response regulator receiver domain DJ564_RS20330 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS20335 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS20335 PF00672 HAMP domain DJ564_RS20335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS20360 PF05114 Protein of unknown function (DUF692) DJ564_RS20380 PF02146 Sir2 family DJ564_RS20385 PF03466 LysR substrate binding domain DJ564_RS20385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS20390 PF01144 Coenzyme A transferase DJ564_RS20395 PF01144 Coenzyme A transferase DJ564_RS20400 PF02803 Thiolase, C-terminal domain DJ564_RS20400 PF00108 Thiolase, N-terminal domain DJ564_RS20410 PF03466 LysR substrate binding domain DJ564_RS20410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS20415 PF01566 Natural resistance-associated macrophage protein DJ564_RS20460 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS20465 PF00958 GMP synthase C terminal domain DJ564_RS20465 PF00117 Glutamine amidotransferase class-I DJ564_RS20485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ564_RS20500 PF00857 Isochorismatase family DJ564_RS20515 PF00324 Amino acid permease DJ564_RS20520 PF04958 Arginine N-succinyltransferase beta subunit DJ564_RS20525 PF04958 Arginine N-succinyltransferase beta subunit DJ564_RS20545 PF05230 MASE2 domain DJ564_RS20545 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS20550 PF00743 Flavin-binding monooxygenase-like DJ564_RS20555 PF00561 alpha/beta hydrolase fold DJ564_RS20560 PF07063 Domain of unknown function (DUF1338) DJ564_RS20570 PF05638 Type VI secretion system effector, Hcp DJ564_RS20575 PF04717 Type VI secretion system, phage-baseplate injector DJ564_RS20600 PF05638 Type VI secretion system effector, Hcp DJ564_RS20605 PF04717 Type VI secretion system, phage-baseplate injector DJ564_RS20660 PF00005 ABC transporter DJ564_RS20665 PF00884 Sulfatase DJ564_RS20665 PF16347 Domain of unknown function (DUF4976) DJ564_RS20670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ564_RS20670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ564_RS20670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ564_RS20675 PF01370 NAD dependent epimerase/dehydratase family DJ564_RS20680 PF02397 Bacterial sugar transferase DJ564_RS20700 PF13579 Glycosyl transferase 4-like domain DJ564_RS20700 PF00534 Glycosyl transferases group 1 DJ564_RS20710 PF00535 Glycosyl transferase family 2 DJ564_RS20720 PF01522 Polysaccharide deacetylase DJ564_RS20745 PF04794 YdjC-like protein DJ564_RS20755 PF08003 Protein of unknown function (DUF1698) DJ564_RS20765 PF02954 Bacterial regulatory protein, Fis family DJ564_RS20765 PF00158 Sigma-54 interaction domain DJ564_RS20765 PF00072 Response regulator receiver domain DJ564_RS20770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS20770 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS20785 PF02743 Cache domain DJ564_RS20785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS20785 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS20830 PF03783 Curli production assembly/transport component CsgG DJ564_RS20835 PF10614 Type VIII secretion system (T8SS), CsgF protein DJ564_RS20840 PF10627 Curli assembly protein CsgE DJ564_RS20850 PF07963 Prokaryotic N-terminal methylation motif DJ564_RS20850 PF08334 Type II secretion system (T2SS), protein G DJ564_RS20855 PF08334 Type II secretion system (T2SS), protein G DJ564_RS20855 PF07963 Prokaryotic N-terminal methylation motif DJ564_RS20860 PF00263 Bacterial type II and III secretion system protein DJ564_RS20860 PF03958 Bacterial type II/III secretion system short domain DJ564_RS20885 PF00437 Type II/IV secretion system protein DJ564_RS20890 PF00072 Response regulator receiver domain DJ564_RS20890 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS20895 PF09312 SurA N-terminal domain DJ564_RS20895 PF00639 PPIC-type PPIASE domain DJ564_RS20925 PF10145 Phage-related minor tail protein DJ564_RS20925 PF01551 Peptidase family M23 DJ564_RS20925 PF01464 Transglycosylase SLT domain DJ564_RS20930 PF07963 Prokaryotic N-terminal methylation motif DJ564_RS20930 PF08334 Type II secretion system (T2SS), protein G DJ564_RS20935 PF00482 Type II secretion system (T2SS), protein F DJ564_RS20945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS20945 PF03466 LysR substrate binding domain DJ564_RS20950 PF07859 alpha/beta hydrolase fold DJ564_RS20970 PF00857 Isochorismatase family DJ564_RS20975 PF07969 Amidohydrolase family DJ564_RS21000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS21000 PF03466 LysR substrate binding domain DJ564_RS21005 PF10996 Beta-Casp domain DJ564_RS21005 PF00753 Metallo-beta-lactamase superfamily DJ564_RS21005 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DJ564_RS21010 PF12833 Helix-turn-helix domain DJ564_RS21015 PF00199 Catalase DJ564_RS21015 PF06628 Catalase-related immune-responsive DJ564_RS21020 PF00561 alpha/beta hydrolase fold DJ564_RS21025 PF03358 NADPH-dependent FMN reductase DJ564_RS21030 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS21035 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS21040 PF01965 DJ-1/PfpI family DJ564_RS21045 PF17954 Quercetinase C-terminal cupin domain DJ564_RS21045 PF02678 Pirin DJ564_RS21065 PF01791 DeoC/LacD family aldolase DJ564_RS21070 PF08220 DeoR-like helix-turn-helix domain DJ564_RS21070 PF00455 DeoR C terminal sensor domain DJ564_RS21085 PF00294 pfkB family carbohydrate kinase DJ564_RS21095 PF00005 ABC transporter DJ564_RS21110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ564_RS21110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ564_RS21115 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS21125 PF01139 tRNA-splicing ligase RtcB DJ564_RS21140 PF00149 Calcineurin-like phosphoesterase DJ564_RS21170 PF03060 Nitronate monooxygenase DJ564_RS21180 PF01613 Flavin reductase like domain DJ564_RS21185 PF00296 Luciferase-like monooxygenase DJ564_RS21190 PF03737 Aldolase/RraA DJ564_RS21195 PF03737 Aldolase/RraA DJ564_RS21195 PF00180 Isocitrate/isopropylmalate dehydrogenase DJ564_RS21200 PF00682 HMGL-like DJ564_RS21200 PF07836 DmpG-like communication domain DJ564_RS21210 PF07690 Major Facilitator Superfamily DJ564_RS21215 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS21215 PF00107 Zinc-binding dehydrogenase DJ564_RS21220 PF00873 AcrB/AcrD/AcrF family DJ564_RS21225 PF13533 Biotin-lipoyl like DJ564_RS21230 PF01757 Acyltransferase family DJ564_RS21235 PF00144 Beta-lactamase DJ564_RS21240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS21240 PF03466 LysR substrate binding domain DJ564_RS21250 PF00970 Oxidoreductase FAD-binding domain DJ564_RS21250 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS21255 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DJ564_RS21255 PF00355 Rieske [2Fe-2S] domain DJ564_RS21260 PF00866 Ring hydroxylating beta subunit DJ564_RS21275 PF01738 Dienelactone hydrolase family DJ564_RS21280 PF12833 Helix-turn-helix domain DJ564_RS21285 PF12833 Helix-turn-helix domain DJ564_RS21295 PF00355 Rieske [2Fe-2S] domain DJ564_RS21295 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DJ564_RS21300 PF00866 Ring hydroxylating beta subunit DJ564_RS21305 PF00970 Oxidoreductase FAD-binding domain DJ564_RS21305 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS21305 PF00175 Oxidoreductase NAD-binding domain DJ564_RS21315 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS21320 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS21320 PF11862 Domain of unknown function (DUF3382) DJ564_RS21325 PF00005 ABC transporter DJ564_RS21330 PF00005 ABC transporter DJ564_RS21340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ564_RS21340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ564_RS21345 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DJ564_RS21345 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DJ564_RS21350 PF01070 FMN-dependent dehydrogenase DJ564_RS21355 PF03573 outer membrane porin, OprD family DJ564_RS21360 PF01613 Flavin reductase like domain DJ564_RS21365 PF00175 Oxidoreductase NAD-binding domain DJ564_RS21365 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS21380 PF00355 Rieske [2Fe-2S] domain DJ564_RS21380 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DJ564_RS21395 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS21400 PF01425 Amidase DJ564_RS21415 PF00005 ABC transporter DJ564_RS21415 PF12399 Branched-chain amino acid ATP-binding cassette transporter DJ564_RS21420 PF00005 ABC transporter DJ564_RS21425 PF08546 Ketopantoate reductase PanE/ApbA C terminal DJ564_RS21425 PF02558 Ketopantoate reductase PanE/ApbA DJ564_RS21430 PF00596 Class II Aldolase and Adducin N-terminal domain DJ564_RS21435 PF12729 Four helix bundle sensory module for signal transduction DJ564_RS21435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS21435 PF00672 HAMP domain DJ564_RS21445 PF07690 Major Facilitator Superfamily DJ564_RS21470 PF00216 Bacterial DNA-binding protein DJ564_RS21475 PF03483 B3/4 domain DJ564_RS21475 PF03484 tRNA synthetase B5 domain DJ564_RS21475 PF01588 Putative tRNA binding domain DJ564_RS21475 PF03147 Ferredoxin-fold anticodon binding domain DJ564_RS21475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DJ564_RS21480 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DJ564_RS21480 PF01409 tRNA synthetases class II core domain (F) DJ564_RS21485 PF00453 Ribosomal protein L20 DJ564_RS21490 PF01632 Ribosomal protein L35 DJ564_RS21495 PF05198 Translation initiation factor IF-3, N-terminal domain DJ564_RS21495 PF00707 Translation initiation factor IF-3, C-terminal domain DJ564_RS21500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ564_RS21500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ564_RS21500 PF03129 Anticodon binding domain DJ564_RS21500 PF02824 TGS domain DJ564_RS21510 PF00313 'Cold-shock' DNA-binding domain DJ564_RS21530 PF01156 Inosine-uridine preferring nucleoside hydrolase DJ564_RS21535 PF05025 RbsD / FucU transport protein family DJ564_RS21540 PF00294 pfkB family carbohydrate kinase DJ564_RS21545 PF00356 Bacterial regulatory proteins, lacI family DJ564_RS21550 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS21555 PF00005 ABC transporter DJ564_RS21560 PF13407 Periplasmic binding protein domain DJ564_RS21570 PF17763 Glutaminase/Asparaginase C-terminal domain DJ564_RS21570 PF00710 Asparaginase, N-terminal DJ564_RS21580 PF04231 Endonuclease I DJ564_RS21595 PF02599 Global regulator protein family DJ564_RS21610 PF08447 PAS fold DJ564_RS21610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS21620 PF01266 FAD dependent oxidoreductase DJ564_RS21625 PF02625 XdhC and CoxI family DJ564_RS21625 PF13478 XdhC Rossmann domain DJ564_RS21630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ564_RS21630 PF00034 Cytochrome c DJ564_RS21635 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS21635 PF01799 [2Fe-2S] binding domain DJ564_RS21640 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DJ564_RS21640 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DJ564_RS21640 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS21640 PF01799 [2Fe-2S] binding domain DJ564_RS21645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS21645 PF03466 LysR substrate binding domain DJ564_RS21650 PF07690 Major Facilitator Superfamily DJ564_RS21655 PF13378 Enolase C-terminal domain-like DJ564_RS21655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ564_RS21660 PF03328 HpcH/HpaI aldolase/citrate lyase family DJ564_RS21665 PF00171 Aldehyde dehydrogenase family DJ564_RS21670 PF00593 TonB dependent receptor DJ564_RS21670 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS21675 PF04773 FecR protein DJ564_RS21675 PF16220 Domain of unknown function (DUF4880) DJ564_RS21710 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ564_RS21715 PF00156 Phosphoribosyl transferase domain DJ564_RS21720 PF02674 Colicin V production protein DJ564_RS21725 PF05036 Sporulation related domain DJ564_RS21730 PF02875 Mur ligase family, glutamate ligase domain DJ564_RS21730 PF08245 Mur ligase middle domain DJ564_RS21735 PF17848 Acetyl-coA carboxylase zinc finger domain DJ564_RS21735 PF01039 Carboxyl transferase domain DJ564_RS21740 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DJ564_RS21745 PF01416 tRNA pseudouridine synthase DJ564_RS21755 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJ564_RS21755 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ564_RS21760 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ564_RS21760 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJ564_RS21765 PF00180 Isocitrate/isopropylmalate dehydrogenase DJ564_RS21770 PF08241 Methyltransferase domain DJ564_RS21775 PF00694 Aconitase C-terminal domain DJ564_RS21780 PF00330 Aconitase family (aconitate hydratase) DJ564_RS21785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS21790 PF00563 EAL domain DJ564_RS21790 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS21790 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS21795 PF00011 Hsp20/alpha crystallin family DJ564_RS21800 PF01207 Dihydrouridine synthase (Dus) DJ564_RS21810 PF00561 alpha/beta hydrolase fold DJ564_RS21840 PF00749 tRNA synthetases class I (E and Q), catalytic domain DJ564_RS21845 PF13533 Biotin-lipoyl like DJ564_RS21850 PF07690 Major Facilitator Superfamily DJ564_RS21855 PF02151 UvrB/uvrC motif DJ564_RS21855 PF17757 UvrB interaction domain DJ564_RS21855 PF04851 Type III restriction enzyme, res subunit DJ564_RS21855 PF12344 Ultra-violet resistance protein B DJ564_RS21855 PF00271 Helicase conserved C-terminal domain DJ564_RS21865 PF00155 Aminotransferase class I and II DJ564_RS21895 PF00873 AcrB/AcrD/AcrF family DJ564_RS21905 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS21910 PF02321 Outer membrane efflux protein DJ564_RS21920 PF00860 Permease family DJ564_RS21935 PF00797 N-acetyltransferase DJ564_RS21940 PF03372 Endonuclease/Exonuclease/phosphatase family DJ564_RS21945 PF00563 EAL domain DJ564_RS21945 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS21945 PF08447 PAS fold DJ564_RS21945 PF08448 PAS fold DJ564_RS21955 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS21955 PF00107 Zinc-binding dehydrogenase DJ564_RS21990 PF03466 LysR substrate binding domain DJ564_RS21990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS21995 PF17200 Single Cache domain 2 DJ564_RS21995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS21995 PF00672 HAMP domain DJ564_RS22000 PF13726 Na+-H+ antiporter family DJ564_RS22000 PF03553 Na+/H+ antiporter family DJ564_RS22010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS22010 PF00672 HAMP domain DJ564_RS22015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS22020 PF00072 Response regulator receiver domain DJ564_RS22020 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS22040 PF01242 6-pyruvoyl tetrahydropterin synthase DJ564_RS22050 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin DJ564_RS22055 PF07969 Amidohydrolase family DJ564_RS22060 PF01678 Diaminopimelate epimerase DJ564_RS22065 PF12833 Helix-turn-helix domain DJ564_RS22065 PF02311 AraC-like ligand binding domain DJ564_RS22075 PF07690 Major Facilitator Superfamily DJ564_RS22080 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS22080 PF07660 Secretin and TonB N terminus short domain DJ564_RS22080 PF00593 TonB dependent receptor DJ564_RS22090 PF08281 Sigma-70, region 4 DJ564_RS22090 PF04542 Sigma-70 region 2 DJ564_RS22095 PF00171 Aldehyde dehydrogenase family DJ564_RS22100 PF00034 Cytochrome c DJ564_RS22110 PF00672 HAMP domain DJ564_RS22110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS22115 PF01409 tRNA synthetases class II core domain (F) DJ564_RS22115 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DJ564_RS22135 PF07291 Methylamine utilisation protein MauE DJ564_RS22140 PF00578 AhpC/TSA family DJ564_RS22145 PF02975 Methylamine dehydrogenase, L chain DJ564_RS22165 PF01179 Copper amine oxidase, enzyme domain DJ564_RS22165 PF07833 Copper amine oxidase N-terminal domain DJ564_RS22165 PF02727 Copper amine oxidase, N2 domain DJ564_RS22165 PF02728 Copper amine oxidase, N3 domain DJ564_RS22170 PF14525 AraC-binding-like domain DJ564_RS22170 PF12833 Helix-turn-helix domain DJ564_RS22175 PF08223 PaaX-like protein C-terminal domain DJ564_RS22175 PF07848 PaaX-like protein DJ564_RS22180 PF00132 Bacterial transferase hexapeptide (six repeats) DJ564_RS22185 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS22190 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS22195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ564_RS22195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ564_RS22195 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DJ564_RS22200 PF03061 Thioesterase superfamily DJ564_RS22205 PF02803 Thiolase, C-terminal domain DJ564_RS22205 PF00108 Thiolase, N-terminal domain DJ564_RS22210 PF00501 AMP-binding enzyme DJ564_RS22210 PF14535 AMP-binding enzyme C-terminal domain DJ564_RS22225 PF05138 Phenylacetic acid catabolic protein DJ564_RS22230 PF06243 Phenylacetic acid degradation B DJ564_RS22235 PF05138 Phenylacetic acid catabolic protein DJ564_RS22240 PF01883 Iron-sulfur cluster assembly protein DJ564_RS22245 PF00175 Oxidoreductase NAD-binding domain DJ564_RS22245 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS22245 PF00970 Oxidoreductase FAD-binding domain DJ564_RS22255 PF04341 Protein of unknown function, DUF485 DJ564_RS22260 PF00474 Sodium:solute symporter family DJ564_RS22265 PF03573 outer membrane porin, OprD family DJ564_RS22270 PF00171 Aldehyde dehydrogenase family DJ564_RS22270 PF01575 MaoC like domain DJ564_RS22275 PF00072 Response regulator receiver domain DJ564_RS22275 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS22280 PF00202 Aminotransferase class-III DJ564_RS22285 PF13416 Bacterial extracellular solute-binding protein DJ564_RS22290 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS22295 PF02803 Thiolase, C-terminal domain DJ564_RS22295 PF00108 Thiolase, N-terminal domain DJ564_RS22300 PF13533 Biotin-lipoyl like DJ564_RS22305 PF07690 Major Facilitator Superfamily DJ564_RS22310 PF02627 Carboxymuconolactone decarboxylase family DJ564_RS22325 PF02678 Pirin DJ564_RS22325 PF05726 Pirin C-terminal cupin domain DJ564_RS22335 PF00248 Aldo/keto reductase family DJ564_RS22340 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS22340 PF01627 Hpt domain DJ564_RS22340 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS22340 PF00072 Response regulator receiver domain DJ564_RS22340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS22340 PF00989 PAS fold DJ564_RS22345 PF00072 Response regulator receiver domain DJ564_RS22345 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS22355 PF00690 Cation transporter/ATPase, N-terminus DJ564_RS22355 PF00689 Cation transporting ATPase, C-terminus DJ564_RS22365 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DJ564_RS22375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS22380 PF00005 ABC transporter DJ564_RS22380 PF02687 FtsX-like permease family DJ564_RS22380 PF12704 MacB-like periplasmic core domain DJ564_RS22385 PF02321 Outer membrane efflux protein DJ564_RS22395 PF01244 Membrane dipeptidase (Peptidase family M19) DJ564_RS22415 PF00664 ABC transporter transmembrane region DJ564_RS22415 PF00005 ABC transporter DJ564_RS22425 PF07660 Secretin and TonB N terminus short domain DJ564_RS22425 PF00593 TonB dependent receptor DJ564_RS22425 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS22430 PF07859 alpha/beta hydrolase fold DJ564_RS22435 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS22435 PF00668 Condensation domain DJ564_RS22435 PF00550 Phosphopantetheine attachment site DJ564_RS22435 PF00501 AMP-binding enzyme DJ564_RS22440 PF00550 Phosphopantetheine attachment site DJ564_RS22440 PF00668 Condensation domain DJ564_RS22440 PF00501 AMP-binding enzyme DJ564_RS22440 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS22445 PF00975 Thioesterase domain DJ564_RS22455 PF00723 Glycosyl hydrolases family 15 DJ564_RS22465 PF00561 alpha/beta hydrolase fold DJ564_RS22470 PF12833 Helix-turn-helix domain DJ564_RS22470 PF01965 DJ-1/PfpI family DJ564_RS22475 PF01965 DJ-1/PfpI family DJ564_RS22480 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase DJ564_RS22500 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit DJ564_RS22525 PF00171 Aldehyde dehydrogenase family DJ564_RS22535 PF00082 Subtilase family DJ564_RS22535 PF05922 Peptidase inhibitor I9 DJ564_RS22540 PF00664 ABC transporter transmembrane region DJ564_RS22540 PF00005 ABC transporter DJ564_RS22545 PF02954 Bacterial regulatory protein, Fis family DJ564_RS22545 PF01590 GAF domain DJ564_RS22545 PF00158 Sigma-54 interaction domain DJ564_RS22550 PF00905 Penicillin binding protein transpeptidase domain DJ564_RS22550 PF03717 Penicillin-binding Protein dimerisation domain DJ564_RS22555 PF00296 Luciferase-like monooxygenase DJ564_RS22590 PF00892 EamA-like transporter family DJ564_RS22605 PF00106 short chain dehydrogenase DJ564_RS22610 PF01323 DSBA-like thioredoxin domain DJ564_RS22615 PF00550 Phosphopantetheine attachment site DJ564_RS22615 PF16197 Ketoacyl-synthetase C-terminal extension DJ564_RS22615 PF08659 KR domain DJ564_RS22615 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ564_RS22615 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ564_RS22615 PF00698 Acyl transferase domain DJ564_RS22615 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS22615 PF14765 Polyketide synthase dehydratase DJ564_RS22615 PF00107 Zinc-binding dehydrogenase DJ564_RS22620 PF03466 LysR substrate binding domain DJ564_RS22620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS22625 PF00557 Metallopeptidase family M24 DJ564_RS22625 PF01321 Creatinase/Prolidase N-terminal domain DJ564_RS22630 PF00266 Aminotransferase class-V DJ564_RS22635 PF01810 LysE type translocator DJ564_RS22645 PF03358 NADPH-dependent FMN reductase DJ564_RS22650 PF00296 Luciferase-like monooxygenase DJ564_RS22655 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS22655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS22660 PF00158 Sigma-54 interaction domain DJ564_RS22670 PF00376 MerR family regulatory protein DJ564_RS22670 PF09278 MerR, DNA binding DJ564_RS22680 PF00561 alpha/beta hydrolase fold DJ564_RS22685 PF03466 LysR substrate binding domain DJ564_RS22685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS22695 PF00694 Aconitase C-terminal domain DJ564_RS22700 PF00330 Aconitase family (aconitate hydratase) DJ564_RS22730 PF00005 ABC transporter DJ564_RS22735 PF00950 ABC 3 transport family DJ564_RS22745 PF03621 MbtH-like protein DJ564_RS22750 PF00202 Aminotransferase class-III DJ564_RS22760 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS22760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS22760 PF08521 Two-component sensor kinase N-terminal DJ564_RS22765 PF00072 Response regulator receiver domain DJ564_RS22765 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS22770 PF11412 Disulphide bond corrector protein DsbC DJ564_RS22770 PF02683 Cytochrome C biogenesis protein transmembrane region DJ564_RS22775 PF00578 AhpC/TSA family DJ564_RS22780 PF13098 Thioredoxin-like domain DJ564_RS22785 PF00561 alpha/beta hydrolase fold DJ564_RS22790 PF07993 Male sterility protein DJ564_RS22790 PF00550 Phosphopantetheine attachment site DJ564_RS22790 PF00668 Condensation domain DJ564_RS22790 PF00501 AMP-binding enzyme DJ564_RS22790 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS22810 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS22810 PF17932 Tetracyclin repressor-like, C-terminal domain DJ564_RS22825 PF01039 Carboxyl transferase domain DJ564_RS22830 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS22830 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS22830 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS22835 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS22840 PF00289 Biotin carboxylase, N-terminal domain DJ564_RS22840 PF02785 Biotin carboxylase C-terminal domain DJ564_RS22840 PF00364 Biotin-requiring enzyme DJ564_RS22840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ564_RS22850 PF06865 Pyrimidine/purine nucleoside phosphorylase DJ564_RS22870 PF05231 MASE1 DJ564_RS22870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS22870 PF07730 Histidine kinase DJ564_RS22875 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS22875 PF00072 Response regulator receiver domain DJ564_RS22880 PF00781 Diacylglycerol kinase catalytic domain DJ564_RS22895 PF03453 MoeA N-terminal region (domain I and II) DJ564_RS22895 PF03454 MoeA C-terminal region (domain IV) DJ564_RS22895 PF00994 Probable molybdopterin binding domain DJ564_RS22900 PF00994 Probable molybdopterin binding domain DJ564_RS22905 PF12804 MobA-like NTP transferase domain DJ564_RS22915 PF00849 RNA pseudouridylate synthase DJ564_RS22930 PF02080 TrkA-C domain DJ564_RS22930 PF02254 TrkA-N domain DJ564_RS22930 PF00999 Sodium/hydrogen exchanger family DJ564_RS22935 PF00909 Ammonium Transporter Family DJ564_RS22955 PF12792 CSS motif domain associated with EAL DJ564_RS22955 PF00563 EAL domain DJ564_RS22960 PF01966 HD domain DJ564_RS22965 PF02954 Bacterial regulatory protein, Fis family DJ564_RS22965 PF00072 Response regulator receiver domain DJ564_RS22965 PF00158 Sigma-54 interaction domain DJ564_RS22970 PF00072 Response regulator receiver domain DJ564_RS22970 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS22975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS22975 PF00989 PAS fold DJ564_RS22975 PF01627 Hpt domain DJ564_RS22975 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS22975 PF00072 Response regulator receiver domain DJ564_RS22975 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS22985 PF13185 GAF domain DJ564_RS22995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS22995 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS22995 PF01627 Hpt domain DJ564_RS22995 PF00072 Response regulator receiver domain DJ564_RS22995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DJ564_RS22995 PF00672 HAMP domain DJ564_RS23000 PF01047 MarR family DJ564_RS23005 PF00255 Glutathione peroxidase DJ564_RS23010 PF01641 SelR domain DJ564_RS23015 PF00155 Aminotransferase class I and II DJ564_RS23020 PF01435 Peptidase family M48 DJ564_RS23025 PF05724 Thiopurine S-methyltransferase (TPMT) DJ564_RS23030 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DJ564_RS23035 PF00271 Helicase conserved C-terminal domain DJ564_RS23035 PF03880 DbpA RNA binding domain DJ564_RS23035 PF00270 DEAD/DEAH box helicase DJ564_RS23045 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS23055 PF01474 Class-II DAHP synthetase family DJ564_RS23060 PF06224 Winged helix DNA-binding domain DJ564_RS23070 PF03466 LysR substrate binding domain DJ564_RS23070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS23080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS23080 PF03466 LysR substrate binding domain DJ564_RS23085 PF01047 MarR family DJ564_RS23090 PF02566 OsmC-like protein DJ564_RS23095 PF07859 alpha/beta hydrolase fold DJ564_RS23100 PF08207 Elongation factor P (EF-P) KOW-like domain DJ564_RS23100 PF01132 Elongation factor P (EF-P) OB domain DJ564_RS23100 PF09285 Elongation factor P, C-terminal DJ564_RS23115 PF03449 Transcription elongation factor, N-terminal DJ564_RS23115 PF01272 Transcription elongation factor, GreA/GreB, C-term DJ564_RS23120 PF03466 LysR substrate binding domain DJ564_RS23120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS23125 PF00582 Universal stress protein family DJ564_RS23135 PF08546 Ketopantoate reductase PanE/ApbA C terminal DJ564_RS23135 PF02558 Ketopantoate reductase PanE/ApbA DJ564_RS23150 PF00793 DAHP synthetase I family DJ564_RS23160 PF11839 Alanine-zipper, major outer membrane lipoprotein DJ564_RS23165 PF17969 L,D-transpeptidase C-terminal domain DJ564_RS23165 PF03734 L,D-transpeptidase catalytic domain DJ564_RS23200 PF13472 GDSL-like Lipase/Acylhydrolase family DJ564_RS23205 PF00005 ABC transporter DJ564_RS23215 PF03449 Transcription elongation factor, N-terminal DJ564_RS23215 PF01272 Transcription elongation factor, GreA/GreB, C-term DJ564_RS23225 PF07681 DoxX DJ564_RS23230 PF01464 Transglycosylase SLT domain DJ564_RS23230 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS23235 PF01026 TatD related DNase DJ564_RS23240 PF12729 Four helix bundle sensory module for signal transduction DJ564_RS23240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS23240 PF00672 HAMP domain DJ564_RS23270 PF01734 Patatin-like phospholipase DJ564_RS23275 PF00072 Response regulator receiver domain DJ564_RS23275 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS23280 PF13493 Domain of unknown function (DUF4118) DJ564_RS23280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS23280 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS23280 PF02702 Osmosensitive K+ channel His kinase sensor domain DJ564_RS23280 PF13492 GAF domain DJ564_RS23285 PF02669 K+-transporting ATPase, c chain DJ564_RS23295 PF03814 Potassium-transporting ATPase A subunit DJ564_RS23330 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ564_RS23330 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ564_RS23335 PF00106 short chain dehydrogenase DJ564_RS23360 PF00535 Glycosyl transferase family 2 DJ564_RS23385 PF02719 Polysaccharide biosynthesis protein DJ564_RS23390 PF00953 Glycosyl transferase family 4 DJ564_RS23395 PF01370 NAD dependent epimerase/dehydratase family DJ564_RS23400 PF00216 Bacterial DNA-binding protein DJ564_RS23410 PF02397 Bacterial sugar transferase DJ564_RS23420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ564_RS23435 PF00534 Glycosyl transferases group 1 DJ564_RS23435 PF13439 Glycosyltransferase Family 4 DJ564_RS23440 PF16363 GDP-mannose 4,6 dehydratase DJ564_RS23460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ564_RS23465 PF00132 Bacterial transferase hexapeptide (six repeats) DJ564_RS23470 PF00483 Nucleotidyl transferase DJ564_RS23480 PF16363 GDP-mannose 4,6 dehydratase DJ564_RS23490 PF00216 Bacterial DNA-binding protein DJ564_RS23500 PF00575 S1 RNA binding domain DJ564_RS23505 PF02224 Cytidylate kinase DJ564_RS23510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ564_RS23515 PF00155 Aminotransferase class I and II DJ564_RS23520 PF01817 Chorismate mutase type II DJ564_RS23520 PF01842 ACT domain DJ564_RS23520 PF00800 Prephenate dehydratase DJ564_RS23525 PF00266 Aminotransferase class-V DJ564_RS23530 PF00521 DNA gyrase/topoisomerase IV, subunit A DJ564_RS23530 PF03989 DNA gyrase C-terminal domain, beta-propeller DJ564_RS23535 PF01008 Initiation factor 2 subunit family DJ564_RS23540 PF01979 Amidohydrolase family DJ564_RS23550 PF13419 Haloacid dehalogenase-like hydrolase DJ564_RS23555 PF00106 short chain dehydrogenase DJ564_RS23560 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS23570 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS23570 PF00563 EAL domain DJ564_RS23570 PF08448 PAS fold DJ564_RS23575 PF00005 ABC transporter DJ564_RS23575 PF00664 ABC transporter transmembrane region DJ564_RS23585 PF00581 Rhodanese-like domain DJ564_RS23585 PF17773 UPF0176 acylphosphatase like domain DJ564_RS23590 PF01722 BolA-like protein DJ564_RS23600 PF00206 Lyase DJ564_RS23600 PF10415 Fumarase C C-terminus DJ564_RS23605 PF00892 EamA-like transporter family DJ564_RS23615 PF02803 Thiolase, C-terminal domain DJ564_RS23615 PF00108 Thiolase, N-terminal domain DJ564_RS23620 PF03976 Polyphosphate kinase 2 (PPK2) DJ564_RS23625 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DJ564_RS23625 PF01266 FAD dependent oxidoreductase DJ564_RS23635 PF00733 Asparagine synthase DJ564_RS23635 PF13537 Glutamine amidotransferase domain DJ564_RS23640 PF02875 Mur ligase family, glutamate ligase domain DJ564_RS23640 PF08443 RimK-like ATP-grasp domain DJ564_RS23640 PF08245 Mur ligase middle domain DJ564_RS23650 PF06794 Uncharacterised protein family (UPF0270) DJ564_RS23655 PF02599 Global regulator protein family DJ564_RS23660 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DJ564_RS23665 PF00106 short chain dehydrogenase DJ564_RS23665 PF00561 alpha/beta hydrolase fold DJ564_RS23675 PF00884 Sulfatase DJ564_RS23680 PF01852 START domain DJ564_RS23685 PF03692 Putative zinc- or iron-chelating domain DJ564_RS23695 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS23695 PF00155 Aminotransferase class I and II DJ564_RS23700 PF00691 OmpA family DJ564_RS23700 PF13488 Glycine zipper DJ564_RS23715 PF01012 Electron transfer flavoprotein domain DJ564_RS23715 PF00766 Electron transfer flavoprotein FAD-binding domain DJ564_RS23720 PF01012 Electron transfer flavoprotein domain DJ564_RS23730 PF12833 Helix-turn-helix domain DJ564_RS23730 PF06719 AraC-type transcriptional regulator N-terminus DJ564_RS23735 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS23735 PF00107 Zinc-binding dehydrogenase DJ564_RS23740 PF09339 IclR helix-turn-helix domain DJ564_RS23740 PF01614 Bacterial transcriptional regulator DJ564_RS23745 PF07690 Major Facilitator Superfamily DJ564_RS23750 PF13378 Enolase C-terminal domain-like DJ564_RS23750 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ564_RS23755 PF01081 KDPG and KHG aldolase DJ564_RS23760 PF05035 2-keto-3-deoxy-galactonokinase DJ564_RS23790 PF01966 HD domain DJ564_RS23810 PF00294 pfkB family carbohydrate kinase DJ564_RS23820 PF03747 ADP-ribosylglycohydrolase DJ564_RS23825 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS23825 PF07702 UTRA domain DJ564_RS23830 PF02653 Branched-chain amino acid transport system / permease component DJ564_RS23835 PF00005 ABC transporter DJ564_RS23840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ564_RS23850 PF08450 SMP-30/Gluconolactonase/LRE-like region DJ564_RS23855 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS23855 PF07729 FCD domain DJ564_RS23870 PF06463 Molybdenum Cofactor Synthesis C DJ564_RS23870 PF04055 Radical SAM superfamily DJ564_RS23875 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS23880 PF01026 TatD related DNase DJ564_RS23890 PF09115 DNA polymerase III, delta subunit, C terminal DJ564_RS23895 PF02223 Thymidylate kinase DJ564_RS23900 PF02618 YceG-like family DJ564_RS23905 PF01063 Amino-transferase class IV DJ564_RS23910 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ564_RS23910 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ564_RS23915 PF00550 Phosphopantetheine attachment site DJ564_RS23925 PF00698 Acyl transferase domain DJ564_RS23930 PF02504 Fatty acid synthesis protein DJ564_RS23935 PF01783 Ribosomal L32p protein family DJ564_RS23940 PF02620 Large ribosomal RNA subunit accumulation protein YceD DJ564_RS23945 PF02545 Maf-like protein DJ564_RS23950 PF06965 Na+/H+ antiporter 1 DJ564_RS23950 PF01343 Peptidase family S49 DJ564_RS23955 PF13419 Haloacid dehalogenase-like hydrolase DJ564_RS23960 PF00849 RNA pseudouridylate synthase DJ564_RS23960 PF01479 S4 domain DJ564_RS23965 PF12111 Polyribonucleotide phosphorylase C terminal DJ564_RS23965 PF00575 S1 RNA binding domain DJ564_RS23965 PF10150 Ribonuclease E/G family DJ564_RS23980 PF13478 XdhC Rossmann domain DJ564_RS23980 PF02625 XdhC and CoxI family DJ564_RS23985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DJ564_RS23990 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS23990 PF01799 [2Fe-2S] binding domain DJ564_RS23995 PF01565 FAD binding domain DJ564_RS23995 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DJ564_RS24000 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ564_RS24005 PF02348 Cytidylyltransferase DJ564_RS24010 PF03966 Trm112p-like protein DJ564_RS24015 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DJ564_RS24020 PF02472 Biopolymer transport protein ExbD/TolR DJ564_RS24025 PF01618 MotA/TolQ/ExbB proton channel family DJ564_RS24030 PF00753 Metallo-beta-lactamase superfamily DJ564_RS24030 PF03772 Competence protein DJ564_RS24040 PF01061 ABC-2 type transporter DJ564_RS24045 PF00005 ABC transporter DJ564_RS24050 PF00043 Glutathione S-transferase, C-terminal domain DJ564_RS24050 PF13417 Glutathione S-transferase, N-terminal domain DJ564_RS24060 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS24060 PF09317 Domain of unknown function (DUF1974) DJ564_RS24060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS24060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS24070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS24070 PF03466 LysR substrate binding domain DJ564_RS24075 PF01411 tRNA synthetases class II (A) DJ564_RS24075 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ564_RS24075 PF02272 DHHA1 domain DJ564_RS24125 PF16591 Helical bimodular sensor domain DJ564_RS24125 PF00672 HAMP domain DJ564_RS24125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS24130 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS24140 PF00107 Zinc-binding dehydrogenase DJ564_RS24140 PF16884 N-terminal domain of oxidoreductase DJ564_RS24145 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DJ564_RS24150 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS24150 PF00072 Response regulator receiver domain DJ564_RS24155 PF00672 HAMP domain DJ564_RS24155 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS24155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS24170 PF01594 AI-2E family transporter DJ564_RS24180 PF00043 Glutathione S-transferase, C-terminal domain DJ564_RS24180 PF02798 Glutathione S-transferase, N-terminal domain DJ564_RS24185 PF00561 alpha/beta hydrolase fold DJ564_RS24195 PF03061 Thioesterase superfamily DJ564_RS24200 PF00501 AMP-binding enzyme DJ564_RS24220 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DJ564_RS24220 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DJ564_RS24225 PF00593 TonB dependent receptor DJ564_RS24225 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS24235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS24235 PF00672 HAMP domain DJ564_RS24235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DJ564_RS24235 PF01627 Hpt domain DJ564_RS24235 PF00072 Response regulator receiver domain DJ564_RS24235 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS24240 PF07977 FabA-like domain DJ564_RS24245 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ564_RS24245 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ564_RS24255 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DJ564_RS24260 PF03819 MazG nucleotide pyrophosphohydrolase domain DJ564_RS24265 PF02824 TGS domain DJ564_RS24265 PF13291 ACT domain DJ564_RS24265 PF04607 Region found in RelA / SpoT proteins DJ564_RS24270 PF05958 tRNA (Uracil-5-)-methyltransferase DJ564_RS24275 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS24280 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS24280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS24280 PF00672 HAMP domain DJ564_RS24280 PF16750 Sensor domain of 2-component histidine kinase DJ564_RS24285 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS24285 PF00072 Response regulator receiver domain DJ564_RS24290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DJ564_RS24290 PF01627 Hpt domain DJ564_RS24290 PF00072 Response regulator receiver domain DJ564_RS24290 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS24290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS24290 PF00672 HAMP domain DJ564_RS24295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ564_RS24295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ564_RS24315 PF00578 AhpC/TSA family DJ564_RS24320 PF03960 ArsC family DJ564_RS24325 PF03358 NADPH-dependent FMN reductase DJ564_RS24335 PF03352 Methyladenine glycosylase DJ564_RS24340 PF01171 PP-loop family DJ564_RS24350 PF04893 Yip1 domain DJ564_RS24355 PF17283 SprT-like zinc ribbon domain DJ564_RS24355 PF10263 SprT-like family DJ564_RS24360 PF02515 CoA-transferase family III DJ564_RS24365 PF00375 Sodium:dicarboxylate symporter family DJ564_RS24370 PF12833 Helix-turn-helix domain DJ564_RS24370 PF02311 AraC-like ligand binding domain DJ564_RS24380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS24385 PF00072 Response regulator receiver domain DJ564_RS24385 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS24395 PF01738 Dienelactone hydrolase family DJ564_RS24405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS24405 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS24405 PF00672 HAMP domain DJ564_RS24410 PF00072 Response regulator receiver domain DJ564_RS24410 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS24415 PF00317 Ribonucleotide reductase, all-alpha domain DJ564_RS24415 PF02867 Ribonucleotide reductase, barrel domain DJ564_RS24415 PF03477 ATP cone domain DJ564_RS24425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ564_RS24425 PF00460 Flagella basal body rod protein DJ564_RS24425 PF07559 Flagellar basal body protein FlaE DJ564_RS24430 PF13861 FlgD Tudor-like domain DJ564_RS24430 PF13860 FlgD Ig-like domain DJ564_RS24430 PF03963 Flagellar hook capping protein - N-terminal region DJ564_RS24435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DJ564_RS24435 PF00460 Flagella basal body rod protein DJ564_RS24440 PF00460 Flagella basal body rod protein DJ564_RS24445 PF03705 CheR methyltransferase, all-alpha domain DJ564_RS24445 PF01739 CheR methyltransferase, SAM binding domain DJ564_RS24450 PF01584 CheW-like domain DJ564_RS24450 PF00072 Response regulator receiver domain DJ564_RS24460 PF04316 Anti-sigma-28 factor, FlgM DJ564_RS24470 PF07238 PilZ domain DJ564_RS24470 PF07317 Flagellar regulator YcgR DJ564_RS24475 PF07690 Major Facilitator Superfamily DJ564_RS24480 PF00120 Glutamine synthetase, catalytic domain DJ564_RS24495 PF01739 CheR methyltransferase, SAM binding domain DJ564_RS24495 PF01339 CheB methylesterase DJ564_RS24495 PF08448 PAS fold DJ564_RS24495 PF03705 CheR methyltransferase, all-alpha domain DJ564_RS24510 PF12729 Four helix bundle sensory module for signal transduction DJ564_RS24510 PF00672 HAMP domain DJ564_RS24510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS24530 PF13614 AAA domain DJ564_RS24535 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS24535 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS24535 PF00563 EAL domain DJ564_RS24540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS24540 PF00672 HAMP domain DJ564_RS24545 PF00072 Response regulator receiver domain DJ564_RS24555 PF01627 Hpt domain DJ564_RS24555 PF07194 P2 response regulator binding domain DJ564_RS24555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS24555 PF02895 Signal transducing histidine kinase, homodimeric domain DJ564_RS24555 PF01584 CheW-like domain DJ564_RS24560 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS24560 PF00072 Response regulator receiver domain DJ564_RS24565 PF03705 CheR methyltransferase, all-alpha domain DJ564_RS24565 PF01739 CheR methyltransferase, SAM binding domain DJ564_RS24575 PF01339 CheB methylesterase DJ564_RS24575 PF00072 Response regulator receiver domain DJ564_RS24580 PF01584 CheW-like domain DJ564_RS24585 PF00672 HAMP domain DJ564_RS24585 PF17202 Single cache domain 3 DJ564_RS24585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS24590 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS24590 PF00072 Response regulator receiver domain DJ564_RS24595 PF17200 Single Cache domain 2 DJ564_RS24595 PF07730 Histidine kinase DJ564_RS24600 PF13426 PAS domain DJ564_RS24600 PF01740 STAS domain DJ564_RS24630 PF13538 UvrD-like helicase C-terminal domain DJ564_RS24710 PF13488 Glycine zipper DJ564_RS24710 PF00691 OmpA family DJ564_RS24715 PF05857 TraX protein DJ564_RS24760 PF03869 Arc-like DNA binding domain DJ564_RS24765 PF01769 Divalent cation transporter DJ564_RS24765 PF00571 CBS domain DJ564_RS24765 PF03448 MgtE intracellular N domain DJ564_RS24790 PF02599 Global regulator protein family DJ564_RS24795 PF01842 ACT domain DJ564_RS24795 PF00696 Amino acid kinase family DJ564_RS24795 PF13840 ACT domain DJ564_RS24800 PF01411 tRNA synthetases class II (A) DJ564_RS24800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ564_RS24800 PF02272 DHHA1 domain DJ564_RS24805 PF01212 Beta-eliminating lyase DJ564_RS24810 PF00885 6,7-dimethyl-8-ribityllumazine synthase DJ564_RS24815 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DJ564_RS24825 PF04996 Succinylarginine dihydrolase DJ564_RS24830 PF00171 Aldehyde dehydrogenase family DJ564_RS24835 PF04958 Arginine N-succinyltransferase beta subunit DJ564_RS24840 PF04958 Arginine N-succinyltransferase beta subunit DJ564_RS24845 PF00202 Aminotransferase class-III DJ564_RS24855 PF12833 Helix-turn-helix domain DJ564_RS24860 PF00005 ABC transporter DJ564_RS24870 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS24875 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS24880 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS24885 PF16177 Acetyl-coenzyme A synthetase N-terminus DJ564_RS24885 PF00501 AMP-binding enzyme DJ564_RS24885 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS24895 PF00268 Ribonucleotide reductase, small chain DJ564_RS24900 PF09019 EcoRII C terminal DJ564_RS24900 PF09217 Restriction endonuclease EcoRII, N-terminal DJ564_RS24920 PF00176 SNF2 family N-terminal domain DJ564_RS24920 PF00271 Helicase conserved C-terminal domain DJ564_RS24920 PF12419 SNF2 Helicase protein DJ564_RS24925 PF03852 DNA mismatch endonuclease Vsr DJ564_RS24930 PF00145 C-5 cytosine-specific DNA methylase DJ564_RS24930 PF18284 DNA methylase N-terminal domain DJ564_RS24975 PF12706 Beta-lactamase superfamily domain DJ564_RS24980 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS24995 PF00117 Glutamine amidotransferase class-I DJ564_RS24995 PF06418 CTP synthase N-terminus DJ564_RS25000 PF03992 Antibiotic biosynthesis monooxygenase DJ564_RS25010 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ564_RS25020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS25020 PF00672 HAMP domain DJ564_RS25030 PF01384 Phosphate transporter family DJ564_RS25050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS25050 PF03466 LysR substrate binding domain DJ564_RS25065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS25065 PF03466 LysR substrate binding domain DJ564_RS25070 PF08281 Sigma-70, region 4 DJ564_RS25070 PF04542 Sigma-70 region 2 DJ564_RS25080 PF03795 YCII-related domain DJ564_RS25090 PF00583 Acetyltransferase (GNAT) family DJ564_RS25115 PF00155 Aminotransferase class I and II DJ564_RS25120 PF02447 GntP family permease DJ564_RS25125 PF01202 Shikimate kinase DJ564_RS25130 PF00356 Bacterial regulatory proteins, lacI family DJ564_RS25130 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ564_RS25135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS25135 PF03466 LysR substrate binding domain DJ564_RS25145 PF02798 Glutathione S-transferase, N-terminal domain DJ564_RS25155 PF08447 PAS fold DJ564_RS25155 PF13426 PAS domain DJ564_RS25155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS25160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS25160 PF03466 LysR substrate binding domain DJ564_RS25165 PF02798 Glutathione S-transferase, N-terminal domain DJ564_RS25165 PF00043 Glutathione S-transferase, C-terminal domain DJ564_RS25175 PF08281 Sigma-70, region 4 DJ564_RS25175 PF04542 Sigma-70 region 2 DJ564_RS25200 PF01327 Polypeptide deformylase DJ564_RS25205 PF03631 Virulence factor BrkB DJ564_RS25210 PF05532 CsbD-like DJ564_RS25220 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS25220 PF00501 AMP-binding enzyme DJ564_RS25225 PF00501 AMP-binding enzyme DJ564_RS25225 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS25230 PF12146 Serine aminopeptidase, S33 DJ564_RS25235 PF01575 MaoC like domain DJ564_RS25240 PF13533 Biotin-lipoyl like DJ564_RS25260 PF12843 Putative quorum-sensing-regulated virulence factor DJ564_RS25265 PF00266 Aminotransferase class-V DJ564_RS25275 PF01081 KDPG and KHG aldolase DJ564_RS25280 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DJ564_RS25285 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DJ564_RS25285 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DJ564_RS25290 PF01418 Helix-turn-helix domain, rpiR family DJ564_RS25290 PF01380 SIS domain DJ564_RS25295 PF01263 Aldose 1-epimerase DJ564_RS25300 PF04966 Carbohydrate-selective porin, OprB family DJ564_RS25310 PF17912 MalK OB fold domain DJ564_RS25310 PF00005 ABC transporter DJ564_RS25315 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS25320 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS25325 PF01547 Bacterial extracellular solute-binding protein DJ564_RS25335 PF00672 HAMP domain DJ564_RS25335 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS25335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS25340 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS25340 PF00072 Response regulator receiver domain DJ564_RS25345 PF02685 Glucokinase DJ564_RS25350 PF00920 Dehydratase family DJ564_RS25355 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ564_RS25355 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DJ564_RS25360 PF02142 MGS-like domain DJ564_RS25365 PF08281 Sigma-70, region 4 DJ564_RS25365 PF04542 Sigma-70 region 2 DJ564_RS25370 PF16220 Domain of unknown function (DUF4880) DJ564_RS25370 PF04773 FecR protein DJ564_RS25375 PF00593 TonB dependent receptor DJ564_RS25375 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS25380 PF01126 Heme oxygenase DJ564_RS25390 PF04304 Protein of unknown function (DUF454) DJ564_RS25395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS25395 PF00672 HAMP domain DJ564_RS25405 PF02515 CoA-transferase family III DJ564_RS25410 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ564_RS25410 PF02805 Metal binding domain of Ada DJ564_RS25410 PF12833 Helix-turn-helix domain DJ564_RS25410 PF06029 AlkA N-terminal domain DJ564_RS25415 PF13520 Amino acid permease DJ564_RS25420 PF13520 Amino acid permease DJ564_RS25430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DJ564_RS25430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DJ564_RS25435 PF00696 Amino acid kinase family DJ564_RS25445 PF18024 Helix-turn-helix domain DJ564_RS25445 PF00158 Sigma-54 interaction domain DJ564_RS25450 PF01597 Glycine cleavage H-protein DJ564_RS25455 PF02347 Glycine cleavage system P-protein DJ564_RS25460 PF03315 Serine dehydratase beta chain DJ564_RS25460 PF03313 Serine dehydratase alpha chain DJ564_RS25465 PF08669 Glycine cleavage T-protein C-terminal barrel domain DJ564_RS25465 PF01571 Aminomethyltransferase folate-binding domain DJ564_RS25470 PF00313 'Cold-shock' DNA-binding domain DJ564_RS25480 PF02445 Quinolinate synthetase A protein DJ564_RS25490 PF06508 Queuosine biosynthesis protein QueC DJ564_RS25495 PF04055 Radical SAM superfamily DJ564_RS25500 PF16331 TolA binding protein trimerisation DJ564_RS25500 PF13525 Outer membrane lipoprotein DJ564_RS25505 PF00691 OmpA family DJ564_RS25510 PF07676 WD40-like Beta Propeller Repeat DJ564_RS25510 PF04052 TolB amino-terminal domain DJ564_RS25520 PF02472 Biopolymer transport protein ExbD/TolR DJ564_RS25525 PF01618 MotA/TolQ/ExbB proton channel family DJ564_RS25530 PF03061 Thioesterase superfamily DJ564_RS25535 PF05491 RuvB C-terminal winged helix domain DJ564_RS25535 PF05496 Holliday junction DNA helicase RuvB P-loop domain DJ564_RS25535 PF17864 RuvB AAA lid domain DJ564_RS25540 PF01330 RuvA N terminal domain DJ564_RS25540 PF07499 RuvA, C-terminal domain DJ564_RS25545 PF02075 Crossover junction endodeoxyribonuclease RuvC DJ564_RS25550 PF01709 Transcriptional regulator DJ564_RS25555 PF02938 GAD domain DJ564_RS25555 PF01336 OB-fold nucleic acid binding domain DJ564_RS25555 PF00152 tRNA synthetases class II (D, K and N) DJ564_RS25570 PF00210 Ferritin-like domain DJ564_RS25575 PF00313 'Cold-shock' DNA-binding domain DJ564_RS25580 PF04102 SlyX DJ564_RS25590 PF03573 outer membrane porin, OprD family DJ564_RS25595 PF05552 Conserved TM helix DJ564_RS25595 PF00924 Mechanosensitive ion channel DJ564_RS25605 PF04461 Protein of unknown function (DUF520) DJ564_RS25610 PF08546 Ketopantoate reductase PanE/ApbA C terminal DJ564_RS25610 PF02558 Ketopantoate reductase PanE/ApbA DJ564_RS25615 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS25615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS25615 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS25620 PF01923 Cobalamin adenosyltransferase DJ564_RS25625 PF00293 NUDIX domain DJ564_RS25635 PF01960 ArgJ family DJ564_RS25640 PF07516 SecA Wing and Scaffold domain DJ564_RS25640 PF01043 SecA preprotein cross-linking domain DJ564_RS25640 PF07517 SecA DEAD-like domain DJ564_RS25640 PF02810 SEC-C motif DJ564_RS25655 PF05872 Bacterial protein of unknown function (DUF853) DJ564_RS25660 PF02743 Cache domain DJ564_RS25660 PF00672 HAMP domain DJ564_RS25660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS25665 PF13439 Glycosyltransferase Family 4 DJ564_RS25665 PF00534 Glycosyl transferases group 1 DJ564_RS25680 PF00551 Formyl transferase DJ564_RS25695 PF00929 Exonuclease DJ564_RS25695 PF08411 Exonuclease C-terminal DJ564_RS25720 PF07726 ATPase family associated with various cellular activities (AAA) DJ564_RS25720 PF17863 AAA lid domain DJ564_RS25745 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain DJ564_RS25745 PF18413 Neuraminidase-like domain DJ564_RS25750 PF03538 Salmonella virulence plasmid 28.1kDa A protein DJ564_RS25780 PF00224 Pyruvate kinase, barrel domain DJ564_RS25780 PF02887 Pyruvate kinase, alpha/beta domain DJ564_RS25785 PF00378 Enoyl-CoA hydratase/isomerase DJ564_RS25790 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS25795 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS25795 PF08448 PAS fold DJ564_RS25800 PF05683 Fumarase C-terminus DJ564_RS25800 PF05681 Fumarate hydratase (Fumerase) DJ564_RS25820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS25820 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS25825 PF02954 Bacterial regulatory protein, Fis family DJ564_RS25825 PF00158 Sigma-54 interaction domain DJ564_RS25825 PF00072 Response regulator receiver domain DJ564_RS25830 PF00083 Sugar (and other) transporter DJ564_RS25845 PF03992 Antibiotic biosynthesis monooxygenase DJ564_RS25850 PF12833 Helix-turn-helix domain DJ564_RS25850 PF06719 AraC-type transcriptional regulator N-terminus DJ564_RS25855 PF00005 ABC transporter DJ564_RS25855 PF08402 TOBE domain DJ564_RS25865 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS25875 PF00171 Aldehyde dehydrogenase family DJ564_RS25880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ564_RS25880 PF00205 Thiamine pyrophosphate enzyme, central domain DJ564_RS25880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ564_RS25885 PF03466 LysR substrate binding domain DJ564_RS25885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS25890 PF13460 NAD(P)H-binding DJ564_RS25900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS25900 PF03466 LysR substrate binding domain DJ564_RS25910 PF12833 Helix-turn-helix domain DJ564_RS25910 PF02311 AraC-like ligand binding domain DJ564_RS25915 PF01494 FAD binding domain DJ564_RS25920 PF07690 Major Facilitator Superfamily DJ564_RS25935 PF01370 NAD dependent epimerase/dehydratase family DJ564_RS25940 PF03466 LysR substrate binding domain DJ564_RS25940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS25950 PF01810 LysE type translocator DJ564_RS25955 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJ564_RS25955 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJ564_RS25970 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS25970 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS25970 PF00563 EAL domain DJ564_RS25995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DJ564_RS26000 PF00873 AcrB/AcrD/AcrF family DJ564_RS26020 PF08521 Two-component sensor kinase N-terminal DJ564_RS26020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS26020 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS26025 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS26025 PF00072 Response regulator receiver domain DJ564_RS26035 PF00118 TCP-1/cpn60 chaperonin family DJ564_RS26040 PF00166 Chaperonin 10 Kd subunit DJ564_RS26045 PF04186 FxsA cytoplasmic membrane protein DJ564_RS26060 PF10609 NUBPL iron-transfer P-loop NTPase DJ564_RS26065 PF09334 tRNA synthetases class I (M) DJ564_RS26065 PF01588 Putative tRNA binding domain DJ564_RS26070 PF02508 Rnf-Nqr subunit, membrane protein DJ564_RS26075 PF04060 Putative Fe-S cluster DJ564_RS26080 PF03116 NQR2, RnfD, RnfE family DJ564_RS26085 PF04205 FMN-binding domain DJ564_RS26095 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ564_RS26095 PF00633 Helix-hairpin-helix motif DJ564_RS26095 PF10576 Iron-sulfur binding domain of endonuclease III DJ564_RS26105 PF00072 Response regulator receiver domain DJ564_RS26105 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS26115 PF00764 Arginosuccinate synthase DJ564_RS26125 PF01979 Amidohydrolase family DJ564_RS26130 PF00929 Exonuclease DJ564_RS26135 PF00578 AhpC/TSA family DJ564_RS26135 PF10417 C-terminal domain of 1-Cys peroxiredoxin DJ564_RS26140 PF04324 BFD-like [2Fe-2S] binding domain DJ564_RS26145 PF00210 Ferritin-like domain DJ564_RS26150 PF00462 Glutaredoxin DJ564_RS26155 PF00384 Molybdopterin oxidoreductase DJ564_RS26155 PF01568 Molydopterin dinucleotide binding domain DJ564_RS26155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ564_RS26165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DJ564_RS26165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DJ564_RS26170 PF00005 ABC transporter DJ564_RS26170 PF08402 TOBE domain DJ564_RS26175 PF02567 Phenazine biosynthesis-like protein DJ564_RS26180 PF04073 Aminoacyl-tRNA editing domain DJ564_RS26185 PF00230 Major intrinsic protein DJ564_RS26190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ564_RS26190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ564_RS26195 PF00455 DeoR C terminal sensor domain DJ564_RS26195 PF08220 DeoR-like helix-turn-helix domain DJ564_RS26200 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DJ564_RS26200 PF01266 FAD dependent oxidoreductase DJ564_RS26205 PF03466 LysR substrate binding domain DJ564_RS26205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS26210 PF07690 Major Facilitator Superfamily DJ564_RS26220 PF00175 Oxidoreductase NAD-binding domain DJ564_RS26220 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS26225 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DJ564_RS26225 PF00355 Rieske [2Fe-2S] domain DJ564_RS26235 PF01593 Flavin containing amine oxidoreductase DJ564_RS26240 PF01425 Amidase DJ564_RS26245 PF03222 Tryptophan/tyrosine permease family DJ564_RS26250 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS26255 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS26260 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS26265 PF00005 ABC transporter DJ564_RS26275 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS26275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS26275 PF02743 Cache domain DJ564_RS26280 PF02954 Bacterial regulatory protein, Fis family DJ564_RS26280 PF00158 Sigma-54 interaction domain DJ564_RS26280 PF00072 Response regulator receiver domain DJ564_RS26285 PF06942 GlpM protein DJ564_RS26300 PF00892 EamA-like transporter family DJ564_RS26320 PF00202 Aminotransferase class-III DJ564_RS26335 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS26335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS26340 PF02954 Bacterial regulatory protein, Fis family DJ564_RS26340 PF00072 Response regulator receiver domain DJ564_RS26340 PF00158 Sigma-54 interaction domain DJ564_RS26355 PF00561 alpha/beta hydrolase fold DJ564_RS26360 PF08267 Cobalamin-independent synthase, N-terminal domain DJ564_RS26360 PF01717 Cobalamin-independent synthase, Catalytic domain DJ564_RS26365 PF03466 LysR substrate binding domain DJ564_RS26365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS26375 PF01810 LysE type translocator DJ564_RS26380 PF00293 NUDIX domain DJ564_RS26385 PF00158 Sigma-54 interaction domain DJ564_RS26385 PF00072 Response regulator receiver domain DJ564_RS26385 PF02954 Bacterial regulatory protein, Fis family DJ564_RS26390 PF00563 EAL domain DJ564_RS26390 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS26390 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS26390 PF13188 PAS domain DJ564_RS26395 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS26395 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS26395 PF00563 EAL domain DJ564_RS26400 PF14376 Haem-binding domain DJ564_RS26400 PF03150 Di-haem cytochrome c peroxidase DJ564_RS26400 PF00034 Cytochrome c DJ564_RS26405 PF08447 PAS fold DJ564_RS26405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS26405 PF08448 PAS fold DJ564_RS26410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS26410 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS26410 PF00072 Response regulator receiver domain DJ564_RS26410 PF13188 PAS domain DJ564_RS26410 PF08448 PAS fold DJ564_RS26420 PF00324 Amino acid permease DJ564_RS26425 PF00795 Carbon-nitrogen hydrolase DJ564_RS26430 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS26430 PF00072 Response regulator receiver domain DJ564_RS26435 PF01645 Conserved region in glutamate synthase DJ564_RS26440 PF04138 GtrA-like protein DJ564_RS26455 PF03575 Peptidase family S51 DJ564_RS26460 PF00899 ThiF family DJ564_RS26470 PF00324 Amino acid permease DJ564_RS26485 PF12468 Type III secretion system leucine rich repeat protein DJ564_RS26485 PF14496 C-terminal novel E3 ligase, LRR-interacting DJ564_RS26520 PF03551 Transcriptional regulator PadR-like family DJ564_RS26525 PF08021 Siderophore-interacting FAD-binding domain DJ564_RS26525 PF04954 Siderophore-interacting protein DJ564_RS26540 PF09905 DNA-binding protein VF530 DJ564_RS26545 PF04966 Carbohydrate-selective porin, OprB family DJ564_RS26550 PF01011 PQQ enzyme repeat DJ564_RS26565 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ564_RS26565 PF00004 ATPase family associated with various cellular activities (AAA) DJ564_RS26565 PF02190 ATP-dependent protease La (LON) substrate-binding domain DJ564_RS26575 PF07947 YhhN family DJ564_RS26580 PF13649 Methyltransferase domain DJ564_RS26585 PF08003 Protein of unknown function (DUF1698) DJ564_RS26590 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ564_RS26595 PF07732 Multicopper oxidase DJ564_RS26595 PF00394 Multicopper oxidase DJ564_RS26595 PF07731 Multicopper oxidase DJ564_RS26600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJ564_RS26600 PF00367 phosphotransferase system, EIIB DJ564_RS26605 PF00381 PTS HPr component phosphorylation site DJ564_RS26605 PF00391 PEP-utilising enzyme, mobile domain DJ564_RS26605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJ564_RS26605 PF02896 PEP-utilising enzyme, TIM barrel domain DJ564_RS26605 PF05524 PEP-utilising enzyme, N-terminal DJ564_RS26610 PF02264 LamB porin DJ564_RS26615 PF00128 Alpha amylase, catalytic domain DJ564_RS26615 PF16657 Maltogenic Amylase, C-terminal domain DJ564_RS26620 PF02378 Phosphotransferase system, EIIC DJ564_RS26620 PF00367 phosphotransferase system, EIIB DJ564_RS26625 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS26625 PF07702 UTRA domain DJ564_RS26635 PF00117 Glutamine amidotransferase class-I DJ564_RS26635 PF02540 NAD synthase DJ564_RS26635 PF00958 GMP synthase C terminal domain DJ564_RS26640 PF00478 IMP dehydrogenase / GMP reductase domain DJ564_RS26640 PF00571 CBS domain DJ564_RS26655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS26655 PF03466 LysR substrate binding domain DJ564_RS26660 PF02601 Exonuclease VII, large subunit DJ564_RS26660 PF13742 OB-fold nucleic acid binding domain DJ564_RS26665 PF01551 Peptidase family M23 DJ564_RS26665 PF01476 LysM domain DJ564_RS26665 PF08525 Opacity-associated protein A N-terminal motif DJ564_RS26675 PF00682 HMGL-like DJ564_RS26675 PF08502 LeuA allosteric (dimerisation) domain DJ564_RS26680 PF00795 Carbon-nitrogen hydrolase DJ564_RS26685 PF00155 Aminotransferase class I and II DJ564_RS26695 PF01926 50S ribosome-binding GTPase DJ564_RS26695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DJ564_RS26700 PF13360 PQQ-like domain DJ564_RS26710 PF13393 Histidyl-tRNA synthetase DJ564_RS26710 PF03129 Anticodon binding domain DJ564_RS26715 PF04551 GcpE protein DJ564_RS26720 PF13464 Domain of unknown function (DUF4115) DJ564_RS26730 PF04055 Radical SAM superfamily DJ564_RS26735 PF00334 Nucleoside diphosphate kinase DJ564_RS26740 PF04384 Iron-sulphur cluster assembly DJ564_RS26745 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS26750 PF00012 Hsp70 protein DJ564_RS26755 PF07743 HSCB C-terminal oligomerisation domain DJ564_RS26755 PF00226 DnaJ domain DJ564_RS26760 PF01521 Iron-sulphur cluster biosynthesis DJ564_RS26765 PF01592 NifU-like N terminal domain DJ564_RS26770 PF00266 Aminotransferase class-V DJ564_RS26775 PF02082 Transcriptional regulator DJ564_RS26780 PF00132 Bacterial transferase hexapeptide (six repeats) DJ564_RS26780 PF06426 Serine acetyltransferase, N-terminal DJ564_RS26785 PF00588 SpoU rRNA Methylase family DJ564_RS26790 PF00459 Inositol monophosphatase family DJ564_RS26800 PF05433 Glycine zipper 2TM domain DJ564_RS26805 PF02355 Protein export membrane protein DJ564_RS26805 PF07549 SecD/SecF GG Motif DJ564_RS26810 PF13721 SecD export protein N-terminal TM region DJ564_RS26810 PF07549 SecD/SecF GG Motif DJ564_RS26810 PF02355 Protein export membrane protein DJ564_RS26815 PF02699 Preprotein translocase subunit DJ564_RS26820 PF01702 Queuine tRNA-ribosyltransferase DJ564_RS26825 PF02547 Queuosine biosynthesis protein DJ564_RS26850 PF02086 D12 class N6 adenine-specific DNA methyltransferase DJ564_RS26875 PF00037 4Fe-4S binding domain DJ564_RS26875 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DJ564_RS26875 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DJ564_RS26880 PF12838 4Fe-4S dicluster domain DJ564_RS26880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ564_RS26880 PF00384 Molybdopterin oxidoreductase DJ564_RS26880 PF01568 Molydopterin dinucleotide binding domain DJ564_RS26880 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ564_RS26890 PF08000 Bacterial PH domain DJ564_RS26895 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS26895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS26895 PF00672 HAMP domain DJ564_RS26900 PF00072 Response regulator receiver domain DJ564_RS26900 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS26905 PF04333 MlaA lipoprotein DJ564_RS26930 PF00202 Aminotransferase class-III DJ564_RS26935 PF03466 LysR substrate binding domain DJ564_RS26935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS26940 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS26950 PF01625 Peptide methionine sulfoxide reductase DJ564_RS26955 PF00578 AhpC/TSA family DJ564_RS26955 PF02683 Cytochrome C biogenesis protein transmembrane region DJ564_RS26955 PF17991 Thioredoxin like C-terminal domain DJ564_RS26960 PF01641 SelR domain DJ564_RS26965 PF00072 Response regulator receiver domain DJ564_RS26965 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS26970 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS26970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS26990 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS26990 PF07729 FCD domain DJ564_RS27005 PF01040 UbiA prenyltransferase family DJ564_RS27010 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DJ564_RS27015 PF00510 Cytochrome c oxidase subunit III DJ564_RS27020 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ564_RS27025 PF06481 COX Aromatic Rich Motif DJ564_RS27025 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DJ564_RS27035 PF02600 Disulfide bond formation protein DsbB DJ564_RS27040 PF00175 Oxidoreductase NAD-binding domain DJ564_RS27040 PF00970 Oxidoreductase FAD-binding domain DJ564_RS27040 PF00042 Globin DJ564_RS27045 PF01590 GAF domain DJ564_RS27045 PF00158 Sigma-54 interaction domain DJ564_RS27055 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS27055 PF13188 PAS domain DJ564_RS27055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS27055 PF08448 PAS fold DJ564_RS27055 PF00072 Response regulator receiver domain DJ564_RS27060 PF00583 Acetyltransferase (GNAT) family DJ564_RS27090 PF13533 Biotin-lipoyl like DJ564_RS27095 PF00873 AcrB/AcrD/AcrF family DJ564_RS27100 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS27100 PF00072 Response regulator receiver domain DJ564_RS27105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS27105 PF00672 HAMP domain DJ564_RS27105 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS27115 PF03573 outer membrane porin, OprD family DJ564_RS27120 PF01590 GAF domain DJ564_RS27120 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS27120 PF00360 Phytochrome region DJ564_RS27120 PF00563 EAL domain DJ564_RS27125 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DJ564_RS27130 PF12327 FtsZ family, C-terminal domain DJ564_RS27130 PF00091 Tubulin/FtsZ family, GTPase domain DJ564_RS27135 PF02491 SHS2 domain inserted in FTSA DJ564_RS27140 PF03799 Cell division protein FtsQ DJ564_RS27140 PF08478 POTRA domain, FtsQ-type DJ564_RS27145 PF01820 D-ala D-ala ligase N-terminus DJ564_RS27145 PF07478 D-ala D-ala ligase C-terminus DJ564_RS27150 PF01225 Mur ligase family, catalytic domain DJ564_RS27150 PF02875 Mur ligase family, glutamate ligase domain DJ564_RS27150 PF08245 Mur ligase middle domain DJ564_RS27155 PF04101 Glycosyltransferase family 28 C-terminal domain DJ564_RS27155 PF03033 Glycosyltransferase family 28 N-terminal domain DJ564_RS27160 PF01098 Cell cycle protein DJ564_RS27165 PF08245 Mur ligase middle domain DJ564_RS27165 PF02875 Mur ligase family, glutamate ligase domain DJ564_RS27170 PF00953 Glycosyl transferase family 4 DJ564_RS27170 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DJ564_RS27175 PF02875 Mur ligase family, glutamate ligase domain DJ564_RS27175 PF01225 Mur ligase family, catalytic domain DJ564_RS27175 PF08245 Mur ligase middle domain DJ564_RS27180 PF01225 Mur ligase family, catalytic domain DJ564_RS27180 PF02875 Mur ligase family, glutamate ligase domain DJ564_RS27180 PF08245 Mur ligase middle domain DJ564_RS27185 PF03717 Penicillin-binding Protein dimerisation domain DJ564_RS27185 PF00905 Penicillin binding protein transpeptidase domain DJ564_RS27190 PF04999 Cell division protein FtsL DJ564_RS27195 PF01795 MraW methylase family DJ564_RS27200 PF02381 MraZ protein, putative antitoxin-like DJ564_RS27210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ564_RS27215 PF04348 LppC putative lipoprotein DJ564_RS27220 PF02021 Uncharacterised protein family UPF0102 DJ564_RS27225 PF13580 SIS domain DJ564_RS27230 PF04972 BON domain DJ564_RS27235 PF04386 Stringent starvation protein B DJ564_RS27240 PF00043 Glutathione S-transferase, C-terminal domain DJ564_RS27240 PF02798 Glutathione S-transferase, N-terminal domain DJ564_RS27245 PF02167 Cytochrome C1 family DJ564_RS27250 PF00033 Cytochrome b/b6/petB DJ564_RS27250 PF00032 Cytochrome b(C-terminal)/b6/petD DJ564_RS27255 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DJ564_RS27255 PF00355 Rieske [2Fe-2S] domain DJ564_RS27260 PF00380 Ribosomal protein S9/S16 DJ564_RS27265 PF00572 Ribosomal protein L13 DJ564_RS27270 PF00248 Aldo/keto reductase family DJ564_RS27275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS27275 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS27275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS27285 PF03969 AFG1-like ATPase DJ564_RS27290 PF00579 tRNA synthetases class I (W and Y) DJ564_RS27305 PF00691 OmpA family DJ564_RS27310 PF00753 Metallo-beta-lactamase superfamily DJ564_RS27315 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS27315 PF17874 MalT-like TPR region DJ564_RS27320 PF07044 Protein of unknown function (DUF1329) DJ564_RS27330 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS27330 PF00501 AMP-binding enzyme DJ564_RS27335 PF01810 LysE type translocator DJ564_RS27340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ564_RS27340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ564_RS27345 PF05175 Methyltransferase small domain DJ564_RS27345 PF08468 Methyltransferase small domain N-terminal DJ564_RS27350 PF01169 Uncharacterized protein family UPF0016 DJ564_RS27355 PF01435 Peptidase family M48 DJ564_RS27360 PF00672 HAMP domain DJ564_RS27360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS27365 PF02586 SOS response associated peptidase (SRAP) DJ564_RS27405 PF06039 Malate:quinone oxidoreductase (Mqo) DJ564_RS27420 PF00916 Sulfate permease family DJ564_RS27420 PF01740 STAS domain DJ564_RS27430 PF00156 Phosphoribosyl transferase domain DJ564_RS27440 PF00860 Permease family DJ564_RS27445 PF00762 Ferrochelatase DJ564_RS27450 PF08338 Domain of unknown function (DUF1731) DJ564_RS27450 PF01370 NAD dependent epimerase/dehydratase family DJ564_RS27455 PF01593 Flavin containing amine oxidoreductase DJ564_RS27470 PF13411 MerR HTH family regulatory protein DJ564_RS27475 PF03441 FAD binding domain of DNA photolyase DJ564_RS27475 PF00875 DNA photolyase DJ564_RS27485 PF00106 short chain dehydrogenase DJ564_RS27490 PF01593 Flavin containing amine oxidoreductase DJ564_RS27515 PF09411 Lipid A 3-O-deacylase (PagL) DJ564_RS27520 PF01177 Asp/Glu/Hydantoin racemase DJ564_RS27525 PF00899 ThiF family DJ564_RS27530 PF17827 PrmC N-terminal domain DJ564_RS27530 PF05175 Methyltransferase small domain DJ564_RS27535 PF03462 PCRF domain DJ564_RS27535 PF00472 RF-1 domain DJ564_RS27540 PF01488 Shikimate / quinate 5-dehydrogenase DJ564_RS27540 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DJ564_RS27540 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DJ564_RS27550 PF03550 Outer membrane lipoprotein LolB DJ564_RS27555 PF08544 GHMP kinases C terminal DJ564_RS27555 PF00288 GHMP kinases N terminal domain DJ564_RS27565 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DJ564_RS27565 PF14572 Phosphoribosyl synthetase-associated domain DJ564_RS27570 PF14693 Ribosomal protein TL5, C-terminal domain DJ564_RS27570 PF01386 Ribosomal L25p family DJ564_RS27575 PF01195 Peptidyl-tRNA hydrolase DJ564_RS27580 PF01926 50S ribosome-binding GTPase DJ564_RS27580 PF06071 Protein of unknown function (DUF933) DJ564_RS27585 PF07690 Major Facilitator Superfamily DJ564_RS27615 PF07478 D-ala D-ala ligase C-terminus DJ564_RS27615 PF01820 D-ala D-ala ligase N-terminus DJ564_RS27630 PF07883 Cupin domain DJ564_RS27635 PF01613 Flavin reductase like domain DJ564_RS27640 PF13426 PAS domain DJ564_RS27640 PF08447 PAS fold DJ564_RS27640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS27645 PF00083 Sugar (and other) transporter DJ564_RS27650 PF02667 Short chain fatty acid transporter DJ564_RS27655 PF00012 Hsp70 protein DJ564_RS27675 PF00484 Carbonic anhydrase DJ564_RS27685 PF00583 Acetyltransferase (GNAT) family DJ564_RS27710 PF02470 MlaD protein DJ564_RS27715 PF04403 Paraquat-inducible protein A DJ564_RS27720 PF04403 Paraquat-inducible protein A DJ564_RS27755 PF01794 Ferric reductase like transmembrane component DJ564_RS27760 PF00174 Oxidoreductase molybdopterin binding domain DJ564_RS27765 PF01066 CDP-alcohol phosphatidyltransferase DJ564_RS27770 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DJ564_RS27770 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DJ564_RS27775 PF10369 Small subunit of acetolactate synthase DJ564_RS27780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ564_RS27780 PF00205 Thiamine pyrophosphate enzyme, central domain DJ564_RS27780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ564_RS27790 PF00849 RNA pseudouridylate synthase DJ564_RS27790 PF04287 tRNA pseudouridine synthase C DJ564_RS27800 PF14814 Bifunctional transglycosylase second domain DJ564_RS27800 PF00905 Penicillin binding protein transpeptidase domain DJ564_RS27800 PF00912 Transglycosylase DJ564_RS27825 PF00005 ABC transporter DJ564_RS27830 PF01032 FecCD transport family DJ564_RS27835 PF01497 Periplasmic binding protein DJ564_RS27845 PF03749 Sugar fermentation stimulation protein RE domain DJ564_RS27845 PF17746 SfsA N-terminal OB domain DJ564_RS27850 PF00155 Aminotransferase class I and II DJ564_RS27855 PF01258 Prokaryotic dksA/traR C4-type zinc finger DJ564_RS27860 PF00749 tRNA synthetases class I (E and Q), catalytic domain DJ564_RS27870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS27870 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS27870 PF00989 PAS fold DJ564_RS27870 PF08447 PAS fold DJ564_RS27875 PF00072 Response regulator receiver domain DJ564_RS27875 PF02954 Bacterial regulatory protein, Fis family DJ564_RS27875 PF00158 Sigma-54 interaction domain DJ564_RS27885 PF01743 Poly A polymerase head domain DJ564_RS27885 PF12627 Probable RNA and SrmB- binding site of polymerase A DJ564_RS27885 PF12626 Polymerase A arginine-rich C-terminus DJ564_RS27890 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DJ564_RS27895 PF02548 Ketopantoate hydroxymethyltransferase DJ564_RS27900 PF02569 Pantoate-beta-alanine ligase DJ564_RS27905 PF02261 Aspartate decarboxylase DJ564_RS27910 PF00342 Phosphoglucose isomerase DJ564_RS27920 PF16177 Acetyl-coenzyme A synthetase N-terminus DJ564_RS27920 PF13193 AMP-binding enzyme C-terminal domain DJ564_RS27920 PF00501 AMP-binding enzyme DJ564_RS27925 PF10672 S-adenosylmethionine-dependent methyltransferase DJ564_RS27925 PF17785 PUA-like domain DJ564_RS27945 PF04972 BON domain DJ564_RS27950 PF00114 Pilin (bacterial filament) DJ564_RS27950 PF07963 Prokaryotic N-terminal methylation motif DJ564_RS27955 PF00437 Type II/IV secretion system protein DJ564_RS27955 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DJ564_RS27960 PF00482 Type II secretion system (T2SS), protein F DJ564_RS27965 PF06750 Bacterial Peptidase A24 N-terminal domain DJ564_RS27965 PF01478 Type IV leader peptidase family DJ564_RS27970 PF01121 Dephospho-CoA kinase DJ564_RS27975 PF03884 DNA gyrase inhibitor YacG DJ564_RS27995 PF03573 outer membrane porin, OprD family DJ564_RS28000 PF03594 Benzoate membrane transport protein DJ564_RS28005 PF07690 Major Facilitator Superfamily DJ564_RS28030 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS28040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS28040 PF00672 HAMP domain DJ564_RS28040 PF12729 Four helix bundle sensory module for signal transduction DJ564_RS28065 PF07724 AAA domain (Cdc48 subfamily) DJ564_RS28065 PF00004 ATPase family associated with various cellular activities (AAA) DJ564_RS28065 PF10431 C-terminal, D2-small domain, of ClpB protein DJ564_RS28065 PF02861 Clp amino terminal domain, pathogenicity island component DJ564_RS28065 PF17871 AAA lid domain DJ564_RS28070 PF02578 Multi-copper polyphenol oxidoreductase laccase DJ564_RS28075 PF01479 S4 domain DJ564_RS28075 PF00849 RNA pseudouridylate synthase DJ564_RS28080 PF13525 Outer membrane lipoprotein DJ564_RS28090 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS28090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS28095 PF02954 Bacterial regulatory protein, Fis family DJ564_RS28095 PF00158 Sigma-54 interaction domain DJ564_RS28095 PF00072 Response regulator receiver domain DJ564_RS28100 PF01266 FAD dependent oxidoreductase DJ564_RS28105 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor DJ564_RS28105 PF07963 Prokaryotic N-terminal methylation motif DJ564_RS28110 PF05567 Neisseria PilC beta-propeller domain DJ564_RS28130 PF00114 Pilin (bacterial filament) DJ564_RS28130 PF07963 Prokaryotic N-terminal methylation motif DJ564_RS28140 PF02401 LytB protein DJ564_RS28145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJ564_RS28150 PF01252 Signal peptidase (SPase) II DJ564_RS28155 PF00133 tRNA synthetases class I (I, L, M and V) DJ564_RS28155 PF08264 Anticodon-binding domain of tRNA DJ564_RS28155 PF06827 Zinc finger found in FPG and IleRS DJ564_RS28160 PF01687 Riboflavin kinase DJ564_RS28160 PF06574 FAD synthetase DJ564_RS28165 PF03023 Lipid II flippase MurJ DJ564_RS28175 PF01649 Ribosomal protein S20 DJ564_RS28180 PF05981 CreA protein DJ564_RS28185 PF00696 Amino acid kinase family DJ564_RS28185 PF01472 PUA domain DJ564_RS28190 PF01926 50S ribosome-binding GTPase DJ564_RS28190 PF01018 GTP1/OBG DJ564_RS28195 PF01016 Ribosomal L27 protein DJ564_RS28200 PF00829 Ribosomal prokaryotic L21 protein DJ564_RS28205 PF00348 Polyprenyl synthetase DJ564_RS28210 PF08274 PhnA Zinc-Ribbon DJ564_RS28210 PF03831 PhnA domain DJ564_RS28215 PF12804 MobA-like NTP transferase domain DJ564_RS28215 PF00132 Bacterial transferase hexapeptide (six repeats) DJ564_RS28225 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DJ564_RS28225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJ564_RS28235 PF03350 Uncharacterized protein family, UPF0114 DJ564_RS28250 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ564_RS28250 PF13654 AAA domain DJ564_RS28270 PF01272 Transcription elongation factor, GreA/GreB, C-term DJ564_RS28270 PF03449 Transcription elongation factor, N-terminal DJ564_RS28275 PF12848 ABC transporter DJ564_RS28275 PF00005 ABC transporter DJ564_RS28280 PF00563 EAL domain DJ564_RS28280 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS28280 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS28285 PF00464 Serine hydroxymethyltransferase DJ564_RS28290 PF00375 Sodium:dicarboxylate symporter family DJ564_RS28295 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS28295 PF07729 FCD domain DJ564_RS28305 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ564_RS28305 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ564_RS28310 PF04328 Selenoprotein, putative DJ564_RS28315 PF13722 5TM C-terminal transporter carbon starvation CstA DJ564_RS28315 PF02554 Carbon starvation protein CstA DJ564_RS28320 PF07238 PilZ domain DJ564_RS28325 PF18073 Rubredoxin metal binding domain DJ564_RS28335 PF00199 Catalase DJ564_RS28335 PF06628 Catalase-related immune-responsive DJ564_RS28340 PF01741 Large-conductance mechanosensitive channel, MscL DJ564_RS28345 PF00175 Oxidoreductase NAD-binding domain DJ564_RS28345 PF00970 Oxidoreductase FAD-binding domain DJ564_RS28350 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS28350 PF03472 Autoinducer binding domain DJ564_RS28355 PF05175 Methyltransferase small domain DJ564_RS28365 PF02322 Cytochrome bd terminal oxidase subunit II DJ564_RS28370 PF01654 Cytochrome bd terminal oxidase subunit I DJ564_RS28380 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DJ564_RS28380 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DJ564_RS28385 PF00941 FAD binding domain in molybdopterin dehydrogenase DJ564_RS28385 PF03450 CO dehydrogenase flavoprotein C-terminal domain DJ564_RS28390 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ564_RS28390 PF01799 [2Fe-2S] binding domain DJ564_RS28410 PF00860 Permease family DJ564_RS28415 PF05958 tRNA (Uracil-5-)-methyltransferase DJ564_RS28430 PF01361 Tautomerase enzyme DJ564_RS28435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS28435 PF03466 LysR substrate binding domain DJ564_RS28440 PF01220 Dehydroquinase class II DJ564_RS28445 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DJ564_RS28445 PF08501 Shikimate dehydrogenase substrate binding domain DJ564_RS28450 PF17938 Tetracyclin repressor-like, C-terminal domain DJ564_RS28450 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS28455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ564_RS28455 PF01261 Xylose isomerase-like TIM barrel DJ564_RS28460 PF07690 Major Facilitator Superfamily DJ564_RS28465 PF00892 EamA-like transporter family DJ564_RS28475 PF04228 Putative neutral zinc metallopeptidase DJ564_RS28495 PF13302 Acetyltransferase (GNAT) domain DJ564_RS28500 PF00850 Histone deacetylase domain DJ564_RS28510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ564_RS28510 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS28515 PF00270 DEAD/DEAH box helicase DJ564_RS28515 PF00271 Helicase conserved C-terminal domain DJ564_RS28520 PF00892 EamA-like transporter family DJ564_RS28525 PF13404 AsnC-type helix-turn-helix domain DJ564_RS28525 PF01037 Lrp/AsnC ligand binding domain DJ564_RS28540 PF04851 Type III restriction enzyme, res subunit DJ564_RS28540 PF13307 Helicase C-terminal domain DJ564_RS28540 PF00929 Exonuclease DJ564_RS28555 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) DJ564_RS28575 PF00005 ABC transporter DJ564_RS28580 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS28595 PF00202 Aminotransferase class-III DJ564_RS28600 PF00171 Aldehyde dehydrogenase family DJ564_RS28605 PF03466 LysR substrate binding domain DJ564_RS28605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS28610 PF04408 Helicase associated domain (HA2) DJ564_RS28610 PF00271 Helicase conserved C-terminal domain DJ564_RS28610 PF08482 ATP-dependent helicase C-terminal DJ564_RS28610 PF00270 DEAD/DEAH box helicase DJ564_RS28635 PF01545 Cation efflux family DJ564_RS28635 PF16916 Dimerisation domain of Zinc Transporter DJ564_RS28645 PF01037 Lrp/AsnC ligand binding domain DJ564_RS28655 PF00849 RNA pseudouridylate synthase DJ564_RS28660 PF01048 Phosphorylase superfamily DJ564_RS28660 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DJ564_RS28665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS28665 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS28665 PF18158 Adaptive response protein AidB N-terminal domain DJ564_RS28670 PF00072 Response regulator receiver domain DJ564_RS28670 PF01627 Hpt domain DJ564_RS28670 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS28670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS28675 PF08543 Phosphomethylpyrimidine kinase DJ564_RS28680 PF02581 Thiamine monophosphate synthase DJ564_RS28685 PF00202 Aminotransferase class-III DJ564_RS28700 PF00919 Uncharacterized protein family UPF0004 DJ564_RS28700 PF01938 TRAM domain DJ564_RS28700 PF04055 Radical SAM superfamily DJ564_RS28705 PF02562 PhoH-like protein DJ564_RS28710 PF02130 Uncharacterized protein family UPF0054 DJ564_RS28715 PF00571 CBS domain DJ564_RS28715 PF03471 Transporter associated domain DJ564_RS28720 PF00795 Carbon-nitrogen hydrolase DJ564_RS28735 PF09334 tRNA synthetases class I (M) DJ564_RS28735 PF13603 Leucyl-tRNA synthetase, Domain 2 DJ564_RS28735 PF00133 tRNA synthetases class I (I, L, M and V) DJ564_RS28735 PF08264 Anticodon-binding domain of tRNA DJ564_RS28755 PF13406 Transglycosylase SLT domain DJ564_RS28760 PF02016 LD-carboxypeptidase N-terminal domain DJ564_RS28760 PF17676 LD-carboxypeptidase C-terminal domain DJ564_RS28765 PF04055 Radical SAM superfamily DJ564_RS28765 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DJ564_RS28770 PF03099 Biotin/lipoate A/B protein ligase family DJ564_RS28775 PF04359 Protein of unknown function (DUF493) DJ564_RS28780 PF00768 D-alanyl-D-alanine carboxypeptidase DJ564_RS28780 PF07943 Penicillin-binding protein 5, C-terminal domain DJ564_RS28785 PF05036 Sporulation related domain DJ564_RS28785 PF03330 Lytic transglycolase DJ564_RS28790 PF13406 Transglycosylase SLT domain DJ564_RS28795 PF01098 Cell cycle protein DJ564_RS28800 PF00905 Penicillin binding protein transpeptidase domain DJ564_RS28800 PF03717 Penicillin-binding Protein dimerisation domain DJ564_RS28805 PF02590 Predicted SPOUT methyltransferase DJ564_RS28815 PF01467 Cytidylyltransferase-like DJ564_RS28820 PF00171 Aldehyde dehydrogenase family DJ564_RS28825 PF02245 Methylpurine-DNA glycosylase (MPG) DJ564_RS28830 PF09335 SNARE associated Golgi protein DJ564_RS28840 PF04172 LrgB-like family DJ564_RS28845 PF03788 LrgA family DJ564_RS28850 PF01575 MaoC like domain DJ564_RS28860 PF13460 NAD(P)H-binding DJ564_RS28875 PF02441 Flavoprotein DJ564_RS28880 PF08245 Mur ligase middle domain DJ564_RS28880 PF02875 Mur ligase family, glutamate ligase domain DJ564_RS28880 PF01225 Mur ligase family, catalytic domain DJ564_RS28885 PF01590 GAF domain DJ564_RS28885 PF00158 Sigma-54 interaction domain DJ564_RS28885 PF02954 Bacterial regulatory protein, Fis family DJ564_RS28890 PF00171 Aldehyde dehydrogenase family DJ564_RS28895 PF13520 Amino acid permease DJ564_RS28900 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DJ564_RS28905 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DJ564_RS28910 PF00583 Acetyltransferase (GNAT) family DJ564_RS28915 PF09335 SNARE associated Golgi protein DJ564_RS28920 PF06167 Glucose-regulated metallo-peptidase M90 DJ564_RS28925 PF00719 Inorganic pyrophosphatase DJ564_RS28930 PF00717 Peptidase S24-like DJ564_RS28930 PF01381 Helix-turn-helix DJ564_RS28940 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) DJ564_RS28945 PF08486 Stage II sporulation protein DJ564_RS28945 PF10062 Predicted secreted protein (DUF2300) DJ564_RS28950 PF00207 Alpha-2-macroglobulin family DJ564_RS28950 PF07703 Alpha-2-macroglobulin bait region domain DJ564_RS28950 PF01835 MG2 domain DJ564_RS28955 PF06672 Protein of unknown function (DUF1175) DJ564_RS28960 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) DJ564_RS28965 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) DJ564_RS28970 PF02661 Fic/DOC family DJ564_RS28975 PF02609 Exonuclease VII small subunit DJ564_RS28980 PF00348 Polyprenyl synthetase DJ564_RS28985 PF02780 Transketolase, C-terminal domain DJ564_RS28985 PF02779 Transketolase, pyrimidine binding domain DJ564_RS28985 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DJ564_RS28990 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS28990 PF00593 TonB dependent receptor DJ564_RS28995 PF01497 Periplasmic binding protein DJ564_RS29005 PF00925 GTP cyclohydrolase II DJ564_RS29015 PF04608 Phosphatidylglycerophosphatase A DJ564_RS29020 PF00586 AIR synthase related protein, N-terminal domain DJ564_RS29020 PF02769 AIR synthase related protein, C-terminal domain DJ564_RS29025 PF01029 NusB family DJ564_RS29030 PF00885 6,7-dimethyl-8-ribityllumazine synthase DJ564_RS29035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DJ564_RS29035 PF00925 GTP cyclohydrolase II DJ564_RS29040 PF00677 Lumazine binding domain DJ564_RS29045 PF01872 RibD C-terminal domain DJ564_RS29045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ564_RS29050 PF03477 ATP cone domain DJ564_RS29065 PF00085 Thioredoxin DJ564_RS29080 PF00005 ABC transporter DJ564_RS29080 PF12704 MacB-like periplasmic core domain DJ564_RS29080 PF02687 FtsX-like permease family DJ564_RS29095 PF03922 OmpW family DJ564_RS29100 PF16363 GDP-mannose 4,6 dehydratase DJ564_RS29110 PF00271 Helicase conserved C-terminal domain DJ564_RS29110 PF00270 DEAD/DEAH box helicase DJ564_RS29110 PF08494 DEAD/H associated DJ564_RS29115 PF00924 Mechanosensitive ion channel DJ564_RS29120 PF07690 Major Facilitator Superfamily DJ564_RS29130 PF03372 Endonuclease/Exonuclease/phosphatase family DJ564_RS29135 PF13091 PLD-like domain DJ564_RS29140 PF03706 Lysylphosphatidylglycerol synthase TM region DJ564_RS29160 PF00857 Isochorismatase family DJ564_RS29170 PF04012 PspA/IM30 family DJ564_RS29175 PF01694 Rhomboid family DJ564_RS29190 PF03994 Domain of Unknown Function (DUF350) DJ564_RS29200 PF03738 Glutathionylspermidine synthase preATP-grasp DJ564_RS29205 PF18381 YcaO cyclodehydratase C-terminal domain DJ564_RS29205 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding DJ564_RS29210 PF00436 Single-strand binding protein family DJ564_RS29215 PF07690 Major Facilitator Superfamily DJ564_RS29220 PF17755 UvrA DNA-binding domain DJ564_RS29220 PF17760 UvrA interaction domain DJ564_RS29225 PF00210 Ferritin-like domain DJ564_RS29230 PF06628 Catalase-related immune-responsive DJ564_RS29230 PF00199 Catalase DJ564_RS29235 PF01196 Ribosomal protein L17 DJ564_RS29240 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DJ564_RS29240 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DJ564_RS29240 PF01000 RNA polymerase Rpb3/RpoA insert domain DJ564_RS29245 PF01479 S4 domain DJ564_RS29245 PF00163 Ribosomal protein S4/S9 N-terminal domain DJ564_RS29250 PF00411 Ribosomal protein S11 DJ564_RS29255 PF00416 Ribosomal protein S13/S18 DJ564_RS29260 PF00444 Ribosomal protein L36 DJ564_RS29265 PF00344 SecY translocase DJ564_RS29270 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DJ564_RS29275 PF00327 Ribosomal protein L30p/L7e DJ564_RS29280 PF00333 Ribosomal protein S5, N-terminal domain DJ564_RS29280 PF03719 Ribosomal protein S5, C-terminal domain DJ564_RS29285 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DJ564_RS29290 PF00347 Ribosomal protein L6 DJ564_RS29295 PF00410 Ribosomal protein S8 DJ564_RS29300 PF00253 Ribosomal protein S14p/S29e DJ564_RS29305 PF00673 ribosomal L5P family C-terminus DJ564_RS29305 PF00281 Ribosomal protein L5 DJ564_RS29310 PF00467 KOW motif DJ564_RS29310 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DJ564_RS29315 PF00238 Ribosomal protein L14p/L23e DJ564_RS29320 PF00366 Ribosomal protein S17 DJ564_RS29325 PF00831 Ribosomal L29 protein DJ564_RS29330 PF00252 Ribosomal protein L16p/L10e DJ564_RS29335 PF00189 Ribosomal protein S3, C-terminal domain DJ564_RS29335 PF07650 KH domain DJ564_RS29340 PF00237 Ribosomal protein L22p/L17e DJ564_RS29345 PF00203 Ribosomal protein S19 DJ564_RS29350 PF00181 Ribosomal Proteins L2, RNA binding domain DJ564_RS29350 PF03947 Ribosomal Proteins L2, C-terminal domain DJ564_RS29355 PF00276 Ribosomal protein L23 DJ564_RS29360 PF00573 Ribosomal protein L4/L1 family DJ564_RS29365 PF00297 Ribosomal protein L3 DJ564_RS29370 PF00338 Ribosomal protein S10p/S20e DJ564_RS29375 PF03143 Elongation factor Tu C-terminal domain DJ564_RS29375 PF03144 Elongation factor Tu domain 2 DJ564_RS29375 PF00009 Elongation factor Tu GTP binding domain DJ564_RS29380 PF03144 Elongation factor Tu domain 2 DJ564_RS29380 PF00679 Elongation factor G C-terminus DJ564_RS29380 PF03764 Elongation factor G, domain IV DJ564_RS29380 PF14492 Elongation Factor G, domain II DJ564_RS29380 PF00009 Elongation factor Tu GTP binding domain DJ564_RS29385 PF00177 Ribosomal protein S7p/S5e DJ564_RS29390 PF00164 Ribosomal protein S12/S23 DJ564_RS29395 PF05000 RNA polymerase Rpb1, domain 4 DJ564_RS29395 PF04983 RNA polymerase Rpb1, domain 3 DJ564_RS29395 PF00623 RNA polymerase Rpb1, domain 2 DJ564_RS29395 PF04997 RNA polymerase Rpb1, domain 1 DJ564_RS29395 PF04998 RNA polymerase Rpb1, domain 5 DJ564_RS29400 PF04565 RNA polymerase Rpb2, domain 3 DJ564_RS29400 PF04563 RNA polymerase beta subunit DJ564_RS29400 PF10385 RNA polymerase beta subunit external 1 domain DJ564_RS29400 PF04561 RNA polymerase Rpb2, domain 2 DJ564_RS29400 PF00562 RNA polymerase Rpb2, domain 6 DJ564_RS29400 PF04560 RNA polymerase Rpb2, domain 7 DJ564_RS29405 PF16320 Ribosomal protein L7/L12 dimerisation domain DJ564_RS29405 PF00542 Ribosomal protein L7/L12 C-terminal domain DJ564_RS29410 PF00466 Ribosomal protein L10 DJ564_RS29415 PF00687 Ribosomal protein L1p/L10e family DJ564_RS29420 PF03946 Ribosomal protein L11, N-terminal domain DJ564_RS29420 PF00298 Ribosomal protein L11, RNA binding domain DJ564_RS29425 PF00467 KOW motif DJ564_RS29425 PF02357 Transcription termination factor nusG DJ564_RS29430 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DJ564_RS29440 PF00009 Elongation factor Tu GTP binding domain DJ564_RS29440 PF03143 Elongation factor Tu C-terminal domain DJ564_RS29440 PF03144 Elongation factor Tu domain 2 DJ564_RS29465 PF03309 Type III pantothenate kinase DJ564_RS29470 PF08279 HTH domain DJ564_RS29470 PF03099 Biotin/lipoate A/B protein ligase family DJ564_RS29470 PF02237 Biotin protein ligase C terminal domain DJ564_RS29505 PF00579 tRNA synthetases class I (W and Y) DJ564_RS29505 PF01479 S4 domain DJ564_RS29515 PF01551 Peptidase family M23 DJ564_RS29515 PF04225 Opacity-associated protein A LysM-like domain DJ564_RS29520 PF03702 Anhydro-N-acetylmuramic acid kinase DJ564_RS29525 PF01521 Iron-sulphur cluster biosynthesis DJ564_RS29530 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ564_RS29530 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJ564_RS29535 PF03653 Uncharacterised protein family (UPF0093) DJ564_RS29555 PF01230 HIT domain DJ564_RS29560 PF03232 Ubiquinone biosynthesis protein COQ7 DJ564_RS29565 PF02675 S-adenosylmethionine decarboxylase DJ564_RS29570 PF02566 OsmC-like protein DJ564_RS29575 PF13545 Crp-like helix-turn-helix domain DJ564_RS29575 PF00027 Cyclic nucleotide-binding domain DJ564_RS29585 PF00218 Indole-3-glycerol phosphate synthase DJ564_RS29590 PF02885 Glycosyl transferase family, helical bundle domain DJ564_RS29590 PF00591 Glycosyl transferase family, a/b domain DJ564_RS29595 PF00117 Glutamine amidotransferase class-I DJ564_RS29600 PF03797 Autotransporter beta-domain DJ564_RS29600 PF00657 GDSL-like Lipase/Acylhydrolase DJ564_RS29605 PF00425 chorismate binding enzyme DJ564_RS29605 PF04715 Anthranilate synthase component I, N terminal region DJ564_RS29610 PF13419 Haloacid dehalogenase-like hydrolase DJ564_RS29615 PF00834 Ribulose-phosphate 3 epimerase family DJ564_RS29620 PF00465 Iron-containing alcohol dehydrogenase DJ564_RS29625 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS29630 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS29640 PF00005 ABC transporter DJ564_RS29640 PF08402 TOBE domain DJ564_RS29650 PF00072 Response regulator receiver domain DJ564_RS29650 PF00196 Bacterial regulatory proteins, luxR family DJ564_RS29655 PF00672 HAMP domain DJ564_RS29655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS29655 PF07730 Histidine kinase DJ564_RS29665 PF00226 DnaJ domain DJ564_RS29665 PF05099 Tellurite resistance protein TerB DJ564_RS29670 PF00483 Nucleotidyl transferase DJ564_RS29675 PF01636 Phosphotransferase enzyme family DJ564_RS29680 PF03968 OstA-like protein DJ564_RS29680 PF04453 LPS transport system D DJ564_RS29685 PF09312 SurA N-terminal domain DJ564_RS29685 PF00639 PPIC-type PPIASE domain DJ564_RS29690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DJ564_RS29695 PF00398 Ribosomal RNA adenine dimethylase DJ564_RS29700 PF04379 ApaG domain DJ564_RS29705 PF00149 Calcineurin-like phosphoesterase DJ564_RS29710 PF00581 Rhodanese-like domain DJ564_RS29715 PF06798 PrkA serine protein kinase C-terminal domain DJ564_RS29715 PF08298 PrkA AAA domain DJ564_RS29720 PF04285 Protein of unknown function (DUF444) DJ564_RS29725 PF04293 SpoVR like protein DJ564_RS29730 PF12627 Probable RNA and SrmB- binding site of polymerase A DJ564_RS29730 PF01743 Poly A polymerase head domain DJ564_RS29730 PF01966 HD domain DJ564_RS29740 PF02152 Dihydroneopterin aldolase DJ564_RS29745 PF02660 Glycerol-3-phosphate acyltransferase DJ564_RS29750 PF00814 Glycoprotease family DJ564_RS29755 PF01165 Ribosomal protein S21 DJ564_RS29760 PF08275 DNA primase catalytic core, N-terminal domain DJ564_RS29760 PF01807 CHC2 zinc finger DJ564_RS29760 PF10410 DnaB-helicase binding domain of primase DJ564_RS29760 PF08278 DNA primase DnaG DnaB-binding DJ564_RS29760 PF13662 Toprim domain DJ564_RS29765 PF00140 Sigma-70 factor, region 1.2 DJ564_RS29765 PF04545 Sigma-70, region 4 DJ564_RS29765 PF04546 Sigma-70, non-essential region DJ564_RS29765 PF03979 Sigma-70 factor, region 1.1 DJ564_RS29765 PF04542 Sigma-70 region 2 DJ564_RS29765 PF04539 Sigma-70 region 3 DJ564_RS29770 PF00563 EAL domain DJ564_RS29770 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS29770 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS29810 PF01593 Flavin containing amine oxidoreductase DJ564_RS29815 PF00795 Carbon-nitrogen hydrolase DJ564_RS29820 PF05193 Peptidase M16 inactive domain DJ564_RS29820 PF00675 Insulinase (Peptidase family M16) DJ564_RS29825 PF08042 PqqA family DJ564_RS29830 PF12706 Beta-lactamase superfamily domain DJ564_RS29835 PF03070 TENA/THI-4/PQQC family DJ564_RS29840 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DJ564_RS29845 PF04055 Radical SAM superfamily DJ564_RS29845 PF13186 Iron-sulfur cluster-binding domain DJ564_RS29855 PF01679 Proteolipid membrane potential modulator DJ564_RS29860 PF00202 Aminotransferase class-III DJ564_RS29865 PF03466 LysR substrate binding domain DJ564_RS29865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS29870 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS29870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS29870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS29870 PF12806 Acetyl-CoA dehydrogenase C-terminal like DJ564_RS29875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS29875 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS29875 PF12806 Acetyl-CoA dehydrogenase C-terminal like DJ564_RS29875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS29880 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS29885 PF02770 Acyl-CoA dehydrogenase, middle domain DJ564_RS29885 PF12806 Acetyl-CoA dehydrogenase C-terminal like DJ564_RS29885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ564_RS29885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ564_RS29900 PF08241 Methyltransferase domain DJ564_RS29905 PF12697 Alpha/beta hydrolase family DJ564_RS29905 PF08241 Methyltransferase domain DJ564_RS29910 PF00155 Aminotransferase class I and II DJ564_RS29920 PF04055 Radical SAM superfamily DJ564_RS29920 PF06968 Biotin and Thiamin Synthesis associated domain DJ564_RS29925 PF00156 Phosphoribosyl transferase domain DJ564_RS29935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS29935 PF03459 TOBE domain DJ564_RS29945 PF01636 Phosphotransferase enzyme family DJ564_RS29955 PF00892 EamA-like transporter family DJ564_RS29965 PF01274 Malate synthase DJ564_RS29970 PF00072 Response regulator receiver domain DJ564_RS29970 PF00158 Sigma-54 interaction domain DJ564_RS29970 PF02954 Bacterial regulatory protein, Fis family DJ564_RS29980 PF11490 DNA polymerase III polC-type N-terminus II DJ564_RS29980 PF00929 Exonuclease DJ564_RS29980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ564_RS29980 PF14579 Helix-hairpin-helix motif DJ564_RS29980 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ564_RS29980 PF02811 PHP domain DJ564_RS29985 PF08281 Sigma-70, region 4 DJ564_RS29985 PF04542 Sigma-70 region 2 DJ564_RS29990 PF16220 Domain of unknown function (DUF4880) DJ564_RS29990 PF04773 FecR protein DJ564_RS29995 PF00593 TonB dependent receptor DJ564_RS29995 PF07715 TonB-dependent Receptor Plug Domain DJ564_RS30020 PF06123 Inner membrane protein CreD DJ564_RS30025 PF00672 HAMP domain DJ564_RS30025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS30025 PF00512 His Kinase A (phospho-acceptor) domain DJ564_RS30030 PF00072 Response regulator receiver domain DJ564_RS30030 PF00486 Transcriptional regulatory protein, C terminal DJ564_RS30035 PF18030 RimK PreATP-grasp domain DJ564_RS30035 PF08443 RimK-like ATP-grasp domain DJ564_RS30040 PF01553 Acyltransferase DJ564_RS30050 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS30050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ564_RS30055 PF00551 Formyl transferase DJ564_RS30065 PF17806 Sarcosine oxidase A3 domain DJ564_RS30065 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ564_RS30065 PF08669 Glycine cleavage T-protein C-terminal barrel domain DJ564_RS30065 PF01571 Aminomethyltransferase folate-binding domain DJ564_RS30070 PF04267 Sarcosine oxidase, delta subunit family DJ564_RS30075 PF01266 FAD dependent oxidoreductase DJ564_RS30080 PF00464 Serine hydroxymethyltransferase DJ564_RS30090 PF01212 Beta-eliminating lyase DJ564_RS30100 PF00042 Globin DJ564_RS30100 PF00970 Oxidoreductase FAD-binding domain DJ564_RS30100 PF00175 Oxidoreductase NAD-binding domain DJ564_RS30110 PF00355 Rieske [2Fe-2S] domain DJ564_RS30110 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DJ564_RS30130 PF00766 Electron transfer flavoprotein FAD-binding domain DJ564_RS30130 PF01012 Electron transfer flavoprotein domain DJ564_RS30135 PF02665 Nitrate reductase gamma subunit DJ564_RS30135 PF13183 4Fe-4S dicluster domain DJ564_RS30135 PF02754 Cysteine-rich domain DJ564_RS30145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ564_RS30190 PF18807 Tripartite Tc toxins repeat DJ564_RS30190 PF14431 YwqJ-like deaminase DJ564_RS30195 PF01965 DJ-1/PfpI family DJ564_RS30195 PF12833 Helix-turn-helix domain DJ564_RS30205 PF05853 beta-keto acid cleavage enzyme DJ564_RS30210 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ564_RS30210 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ564_RS30220 PF06155 Protein of unknown function (DUF971) DJ564_RS30220 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DJ564_RS30235 PF12833 Helix-turn-helix domain DJ564_RS30235 PF01965 DJ-1/PfpI family DJ564_RS30240 PF03313 Serine dehydratase alpha chain DJ564_RS30240 PF03315 Serine dehydratase beta chain DJ564_RS30245 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DJ564_RS30250 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS30255 PF00005 ABC transporter DJ564_RS30255 PF00571 CBS domain DJ564_RS30260 PF02028 BCCT, betaine/carnitine/choline family transporter DJ564_RS30265 PF00440 Bacterial regulatory proteins, tetR family DJ564_RS30265 PF13977 BetI-type transcriptional repressor, C-terminal DJ564_RS30270 PF00171 Aldehyde dehydrogenase family DJ564_RS30275 PF00732 GMC oxidoreductase DJ564_RS30275 PF05199 GMC oxidoreductase DJ564_RS30285 PF01523 Putative modulator of DNA gyrase DJ564_RS30290 PF07690 Major Facilitator Superfamily DJ564_RS30295 PF00271 Helicase conserved C-terminal domain DJ564_RS30295 PF00270 DEAD/DEAH box helicase DJ564_RS30295 PF03880 DbpA RNA binding domain DJ564_RS30305 PF12805 FUSC-like inner membrane protein yccS DJ564_RS30315 PF13673 Acetyltransferase (GNAT) domain DJ564_RS30325 PF01863 Protein of unknown function DUF45 DJ564_RS30330 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS30330 PF00990 Diguanylate cyclase, GGDEF domain DJ564_RS30330 PF00563 EAL domain DJ564_RS30365 PF01116 Fructose-bisphosphate aldolase class-II DJ564_RS30380 PF00162 Phosphoglycerate kinase DJ564_RS30385 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ564_RS30385 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DJ564_RS30390 PF02780 Transketolase, C-terminal domain DJ564_RS30390 PF02779 Transketolase, pyrimidine binding domain DJ564_RS30390 PF00456 Transketolase, thiamine diphosphate binding domain DJ564_RS30395 PF01022 Bacterial regulatory protein, arsR family DJ564_RS30400 PF02772 S-adenosylmethionine synthetase, central domain DJ564_RS30400 PF00438 S-adenosylmethionine synthetase, N-terminal domain DJ564_RS30400 PF02773 S-adenosylmethionine synthetase, C-terminal domain DJ564_RS30405 PF03120 NAD-dependent DNA ligase OB-fold domain DJ564_RS30405 PF01653 NAD-dependent DNA ligase adenylation domain DJ564_RS30410 PF06476 Protein of unknown function (DUF1090) DJ564_RS30435 PF07690 Major Facilitator Superfamily DJ564_RS30440 PF00999 Sodium/hydrogen exchanger family DJ564_RS30445 PF01226 Formate/nitrite transporter DJ564_RS30455 PF05221 S-adenosyl-L-homocysteine hydrolase DJ564_RS30455 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DJ564_RS30465 PF02219 Methylenetetrahydrofolate reductase DJ564_RS30475 PF00271 Helicase conserved C-terminal domain DJ564_RS30475 PF00270 DEAD/DEAH box helicase DJ564_RS30480 PF04264 YceI-like domain DJ564_RS30485 PF01292 Prokaryotic cytochrome b561 DJ564_RS30490 PF01593 Flavin containing amine oxidoreductase DJ564_RS30495 PF00202 Aminotransferase class-III DJ564_RS30500 PF04452 RNA methyltransferase DJ564_RS30505 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS30515 PF01266 FAD dependent oxidoreductase DJ564_RS30520 PF03466 LysR substrate binding domain DJ564_RS30520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS30525 PF03006 Haemolysin-III related DJ564_RS30530 PF03466 LysR substrate binding domain DJ564_RS30530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS30545 PF00550 Phosphopantetheine attachment site DJ564_RS30545 PF16197 Ketoacyl-synthetase C-terminal extension DJ564_RS30545 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ564_RS30545 PF00698 Acyl transferase domain DJ564_RS30545 PF08659 KR domain DJ564_RS30545 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ564_RS30550 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG DJ564_RS30560 PF01039 Carboxyl transferase domain DJ564_RS30565 PF06857 Malonate decarboxylase delta subunit (MdcD) DJ564_RS30570 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DJ564_RS30575 PF16957 Malonate decarboxylase, alpha subunit, transporter DJ564_RS30605 PF01584 CheW-like domain DJ564_RS30605 PF02895 Signal transducing histidine kinase, homodimeric domain DJ564_RS30605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ564_RS30605 PF01627 Hpt domain DJ564_RS30605 PF00072 Response regulator receiver domain DJ564_RS30610 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DJ564_RS30610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS30615 PF01584 CheW-like domain DJ564_RS30620 PF00072 Response regulator receiver domain DJ564_RS30625 PF00072 Response regulator receiver domain DJ564_RS30630 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DJ564_RS30630 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DJ564_RS30640 PF02622 Uncharacterized ACR, COG1678 DJ564_RS30645 PF03652 Holliday junction resolvase DJ564_RS30650 PF00156 Phosphoribosyl transferase domain DJ564_RS30655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DJ564_RS30655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DJ564_RS30660 PF01979 Amidohydrolase family DJ564_RS30670 PF00877 NlpC/P60 family DJ564_RS30675 PF00437 Type II/IV secretion system protein DJ564_RS30680 PF01168 Alanine racemase, N-terminal domain DJ564_RS30685 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ564_RS30685 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ564_RS30690 PF02325 YGGT family DJ564_RS30695 PF02594 Uncharacterised ACR, YggU family COG1872 DJ564_RS30700 PF00561 alpha/beta hydrolase fold DJ564_RS30705 PF07021 Methionine biosynthesis protein MetW DJ564_RS30705 PF00561 alpha/beta hydrolase fold DJ564_RS30715 PF01725 Ham1 family DJ564_RS30720 PF04055 Radical SAM superfamily DJ564_RS30720 PF06969 HemN C-terminal domain DJ564_RS30730 PF02390 Putative methyltransferase DJ564_RS30735 PF05690 Thiazole biosynthesis protein ThiG DJ564_RS30740 PF02597 ThiS family DJ564_RS30740 PF05690 Thiazole biosynthesis protein ThiG DJ564_RS30745 PF04241 Protein of unknown function (DUF423) DJ564_RS30750 PF00912 Transglycosylase DJ564_RS30755 PF00140 Sigma-70 factor, region 1.2 DJ564_RS30755 PF04545 Sigma-70, region 4 DJ564_RS30755 PF04542 Sigma-70 region 2 DJ564_RS30760 PF18075 FtsX extracellular domain DJ564_RS30765 PF00005 ABC transporter DJ564_RS30770 PF02881 SRP54-type protein, helical bundle domain DJ564_RS30770 PF00448 SRP54-type protein, GTPase domain DJ564_RS30780 PF05193 Peptidase M16 inactive domain DJ564_RS30780 PF00675 Insulinase (Peptidase family M16) DJ564_RS30785 PF05193 Peptidase M16 inactive domain DJ564_RS30800 PF02311 AraC-like ligand binding domain DJ564_RS30800 PF12833 Helix-turn-helix domain DJ564_RS30805 PF00581 Rhodanese-like domain DJ564_RS30815 PF00171 Aldehyde dehydrogenase family DJ564_RS30825 PF00732 GMC oxidoreductase DJ564_RS30825 PF05199 GMC oxidoreductase DJ564_RS30830 PF01467 Cytidylyltransferase-like DJ564_RS30835 PF00037 4Fe-4S binding domain DJ564_RS30845 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DJ564_RS30845 PF06827 Zinc finger found in FPG and IleRS DJ564_RS30845 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DJ564_RS30855 PF10672 S-adenosylmethionine-dependent methyltransferase DJ564_RS30855 PF17785 PUA-like domain DJ564_RS30870 PF07690 Major Facilitator Superfamily DJ564_RS30875 PF00920 Dehydratase family DJ564_RS30885 PF00375 Sodium:dicarboxylate symporter family DJ564_RS30890 PF00186 Dihydrofolate reductase DJ564_RS30900 PF10396 GTP-binding protein TrmE N-terminus DJ564_RS30900 PF01926 50S ribosome-binding GTPase DJ564_RS30900 PF12631 MnmE helical domain DJ564_RS30910 PF01966 HD domain DJ564_RS30915 PF01266 FAD dependent oxidoreductase DJ564_RS30930 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS30935 PF08402 TOBE domain DJ564_RS30935 PF00005 ABC transporter DJ564_RS30940 PF03466 LysR substrate binding domain DJ564_RS30940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS30945 PF00403 Heavy-metal-associated domain DJ564_RS30950 PF13411 MerR HTH family regulatory protein DJ564_RS30955 PF00303 Thymidylate synthase DJ564_RS30960 PF01790 Prolipoprotein diacylglyceryl transferase DJ564_RS30965 PF01925 Sulfite exporter TauE/SafE DJ564_RS30975 PF05524 PEP-utilising enzyme, N-terminal DJ564_RS30975 PF01590 GAF domain DJ564_RS30975 PF00391 PEP-utilising enzyme, mobile domain DJ564_RS30975 PF02896 PEP-utilising enzyme, TIM barrel domain DJ564_RS30980 PF00293 NUDIX domain DJ564_RS30995 PF00585 C-terminal regulatory domain of Threonine dehydratase DJ564_RS30995 PF00291 Pyridoxal-phosphate dependent enzyme DJ564_RS31000 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DJ564_RS31010 PF06977 SdiA-regulated DJ564_RS31015 PF06977 SdiA-regulated DJ564_RS31025 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJ564_RS31030 PF01565 FAD binding domain DJ564_RS31030 PF02913 FAD linked oxidases, C-terminal domain DJ564_RS31040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ564_RS31040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ564_RS31040 PF01842 ACT domain DJ564_RS31050 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS31055 PF04463 Protein of unknown function (DUF523) DJ564_RS31080 PF01804 Penicillin amidase DJ564_RS31085 PF12833 Helix-turn-helix domain DJ564_RS31085 PF01965 DJ-1/PfpI family DJ564_RS31095 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS31100 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS31105 PF08402 TOBE domain DJ564_RS31105 PF00005 ABC transporter DJ564_RS31110 PF13416 Bacterial extracellular solute-binding protein DJ564_RS31115 PF13416 Bacterial extracellular solute-binding protein DJ564_RS31120 PF00202 Aminotransferase class-III DJ564_RS31125 PF00120 Glutamine synthetase, catalytic domain DJ564_RS31135 PF00120 Glutamine synthetase, catalytic domain DJ564_RS31145 PF03459 TOBE domain DJ564_RS31145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS31150 PF00005 ABC transporter DJ564_RS31155 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS31160 PF00296 Luciferase-like monooxygenase DJ564_RS31165 PF03358 NADPH-dependent FMN reductase DJ564_RS31170 PF00578 AhpC/TSA family DJ564_RS31170 PF10417 C-terminal domain of 1-Cys peroxiredoxin DJ564_RS31175 PF03573 outer membrane porin, OprD family DJ564_RS31180 PF03573 outer membrane porin, OprD family DJ564_RS31190 PF00583 Acetyltransferase (GNAT) family DJ564_RS31190 PF00696 Amino acid kinase family DJ564_RS31195 PF01546 Peptidase family M20/M25/M40 DJ564_RS31195 PF07687 Peptidase dimerisation domain DJ564_RS31205 PF01037 Lrp/AsnC ligand binding domain DJ564_RS31205 PF13404 AsnC-type helix-turn-helix domain DJ564_RS31215 PF00437 Type II/IV secretion system protein DJ564_RS31215 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DJ564_RS31225 PF02347 Glycine cleavage system P-protein DJ564_RS31230 PF01597 Glycine cleavage H-protein DJ564_RS31235 PF01571 Aminomethyltransferase folate-binding domain DJ564_RS31235 PF08669 Glycine cleavage T-protein C-terminal barrel domain DJ564_RS31240 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS31250 PF01494 FAD binding domain DJ564_RS31260 PF01494 FAD binding domain DJ564_RS31265 PF00557 Metallopeptidase family M24 DJ564_RS31265 PF05195 Aminopeptidase P, N-terminal domain DJ564_RS31270 PF03695 Uncharacterised protein family (UPF0149) DJ564_RS31280 PF05164 Cell division protein ZapA DJ564_RS31290 PF01812 5-formyltetrahydrofolate cyclo-ligase family DJ564_RS31300 PF13533 Biotin-lipoyl like DJ564_RS31305 PF00005 ABC transporter DJ564_RS31320 PF08240 Alcohol dehydrogenase GroES-like domain DJ564_RS31320 PF00107 Zinc-binding dehydrogenase DJ564_RS31330 PF07690 Major Facilitator Superfamily DJ564_RS31340 PF00175 Oxidoreductase NAD-binding domain DJ564_RS31345 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DJ564_RS31350 PF01757 Acyltransferase family DJ564_RS31355 PF07497 Rho termination factor, RNA-binding domain DJ564_RS31355 PF07498 Rho termination factor, N-terminal domain DJ564_RS31355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ564_RS31360 PF00085 Thioredoxin DJ564_RS31365 PF07729 FCD domain DJ564_RS31365 PF00392 Bacterial regulatory proteins, gntR family DJ564_RS31370 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ564_RS31375 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS31380 PF00528 Binding-protein-dependent transport system inner membrane component DJ564_RS31385 PF00005 ABC transporter DJ564_RS31390 PF02541 Ppx/GppA phosphatase family DJ564_RS31395 PF02503 Polyphosphate kinase middle domain DJ564_RS31395 PF13090 Polyphosphate kinase C-terminal domain 2 DJ564_RS31395 PF17941 Polyphosphate kinase C-terminal domain 1 DJ564_RS31395 PF13089 Polyphosphate kinase N-terminal domain DJ564_RS31400 PF00490 Delta-aminolevulinic acid dehydratase DJ564_RS31405 PF09335 SNARE associated Golgi protein DJ564_RS31410 PF04116 Fatty acid hydroxylase superfamily DJ564_RS31420 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DJ564_RS31425 PF03239 Iron permease FTR1 family DJ564_RS31450 PF01810 LysE type translocator DJ564_RS31460 PF12848 ABC transporter DJ564_RS31460 PF00005 ABC transporter DJ564_RS31475 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DJ564_RS31475 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJ564_RS31480 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DJ564_RS31485 PF02600 Disulfide bond formation protein DsbB DJ564_RS31500 PF02602 Uroporphyrinogen-III synthase HemD DJ564_RS31505 PF03900 Porphobilinogen deaminase, C-terminal domain DJ564_RS31505 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DJ564_RS31510 PF04397 LytTr DNA-binding domain DJ564_RS31510 PF00072 Response regulator receiver domain DJ564_RS31515 PF00206 Lyase DJ564_RS31515 PF14698 Argininosuccinate lyase C-terminal DJ564_RS31520 PF14497 Glutathione S-transferase, C-terminal domain DJ564_RS31520 PF13417 Glutathione S-transferase, N-terminal domain DJ564_RS31535 PF12633 Adenylate cyclase NT domain DJ564_RS31535 PF01295 Adenylate cyclase, class-I DJ564_RS31540 PF14760 Rnk N-terminus DJ564_RS31540 PF01272 Transcription elongation factor, GreA/GreB, C-term DJ564_RS31555 PF01491 Frataxin-like domain DJ564_RS31565 PF13627 Prokaryotic lipoprotein-attachment site DJ564_RS31570 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DJ564_RS31570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DJ564_RS31575 PF01678 Diaminopimelate epimerase DJ564_RS31585 PF00589 Phage integrase family DJ564_RS31585 PF02899 Phage integrase, N-terminal SAM-like domain DJ564_RS31590 PF13419 Haloacid dehalogenase-like hydrolase DJ564_RS31600 PF01894 Uncharacterised protein family UPF0047 DJ564_RS31605 PF00909 Ammonium Transporter Family DJ564_RS31610 PF00543 Nitrogen regulatory protein P-II DJ564_RS31615 PF04380 Membrane fusogenic activity DJ564_RS31625 PF01381 Helix-turn-helix DJ564_RS31660 PF00589 Phage integrase family DJ564_RS31665 PF00145 C-5 cytosine-specific DNA methylase DJ564_RS31760 PF13817 IS66 C-terminal element DJ564_RS31760 PF13005 zinc-finger binding domain of transposase IS66 DJ564_RS31760 PF13007 Transposase C of IS166 homeodomain DJ564_RS31760 PF03050 Transposase IS66 family DJ564_RS31775 PF11398 Protein of unknown function (DUF2813) DJ564_RS31795 PF02463 RecF/RecN/SMC N terminal domain DJ564_RS31855 PF00005 ABC transporter DJ564_RS31865 PF03781 Sulfatase-modifying factor enzyme 1 DJ564_RS31885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DJ564_RS31885 PF00672 HAMP domain DJ564_RS31885 PF12729 Four helix bundle sensory module for signal transduction DJ564_RS31895 PF03466 LysR substrate binding domain DJ564_RS31895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ564_RS31900 PF01554 MatE DJ564_RS31910 PF03707 Bacterial signalling protein N terminal repeat DJ564_RS31910 PF00563 EAL domain DJ564_RS31910 PF00990 Diguanylate cyclase, GGDEF domain