locus-tag class description PMA3_RS00005 PF01367 5'-3' exonuclease, C-terminal SAM fold PMA3_RS00005 PF01612 3'-5' exonuclease PMA3_RS00005 PF00476 DNA polymerase family A PMA3_RS00005 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PMA3_RS00015 PF01636 Phosphotransferase enzyme family PMA3_RS00020 PF01297 Zinc-uptake complex component A periplasmic PMA3_RS00025 PF01475 Ferric uptake regulator family PMA3_RS00030 PF00005 ABC transporter PMA3_RS00035 PF00950 ABC 3 transport family PMA3_RS00045 PF00199 Catalase PMA3_RS00045 PF06628 Catalase-related immune-responsive PMA3_RS00045 PF18011 C-terminal domain found in long catalases PMA3_RS00050 PF09383 NIL domain PMA3_RS00050 PF00005 ABC transporter PMA3_RS00055 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS00060 PF03180 NLPA lipoprotein PMA3_RS00065 PF02630 SCO1/SenC PMA3_RS00070 PF01040 UbiA prenyltransferase family PMA3_RS00075 PF02628 Cytochrome oxidase assembly protein PMA3_RS00085 PF02104 SURF1 family PMA3_RS00095 PF00510 Cytochrome c oxidase subunit III PMA3_RS00100 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 PMA3_RS00105 PF00115 Cytochrome C and Quinol oxidase polypeptide I PMA3_RS00110 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PMA3_RS00110 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PMA3_RS00120 PF00916 Sulfate permease family PMA3_RS00120 PF01740 STAS domain PMA3_RS00125 PF00484 Carbonic anhydrase PMA3_RS00130 PF04055 Radical SAM superfamily PMA3_RS00140 PF01432 Peptidase family M3 PMA3_RS00145 PF09526 Probable metal-binding protein (DUF2387) PMA3_RS00150 PF01432 Peptidase family M3 PMA3_RS00155 PF00132 Bacterial transferase hexapeptide (six repeats) PMA3_RS00160 PF13419 Haloacid dehalogenase-like hydrolase PMA3_RS00185 PF02566 OsmC-like protein PMA3_RS00190 PF00296 Luciferase-like monooxygenase PMA3_RS00210 PF03466 LysR substrate binding domain PMA3_RS00210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS00215 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS00220 PF00290 Tryptophan synthase alpha chain PMA3_RS00250 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PMA3_RS00250 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PMA3_RS00255 PF02233 NAD(P) transhydrogenase beta subunit PMA3_RS00260 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PMA3_RS00265 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PMA3_RS00265 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PMA3_RS00270 PF03466 LysR substrate binding domain PMA3_RS00270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS00275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS00275 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS00275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS00280 PF02515 CoA-transferase family III PMA3_RS00300 PF04773 FecR protein PMA3_RS00300 PF16220 Domain of unknown function (DUF4880) PMA3_RS00310 PF00550 Phosphopantetheine attachment site PMA3_RS00310 PF00668 Condensation domain PMA3_RS00310 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS00310 PF00501 AMP-binding enzyme PMA3_RS00325 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS00325 PF07729 FCD domain PMA3_RS00340 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) PMA3_RS00345 PF01270 Glycosyl hydrolases family 8 PMA3_RS00350 PF03170 Bacterial cellulose synthase subunit PMA3_RS00355 PF03552 Cellulose synthase PMA3_RS00355 PF00535 Glycosyl transferase family 2 PMA3_RS00355 PF07238 PilZ domain PMA3_RS00360 PF06564 Cellulose biosynthesis protein BcsQ PMA3_RS00370 PF11658 Cellulose biosynthesis protein BcsG PMA3_RS00380 PF10995 Cellulose biosynthesis GIL PMA3_RS00385 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PMA3_RS00395 PF00005 ABC transporter PMA3_RS00400 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS00405 PF16200 C-terminal region of band_7 PMA3_RS00405 PF01145 SPFH domain / Band 7 family PMA3_RS00435 PF04632 Fusaric acid resistance protein family PMA3_RS00445 PF13533 Biotin-lipoyl like PMA3_RS00450 PF02321 Outer membrane efflux protein PMA3_RS00460 PF06097 Bacterial protein of unknown function (DUF945) PMA3_RS00470 PF14883 Hypothetical glycosyl hydrolase family 13 PMA3_RS00470 PF01522 Polysaccharide deacetylase PMA3_RS00475 PF00535 Glycosyl transferase family 2 PMA3_RS00485 PF14759 Reductase C-terminal PMA3_RS00485 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS00495 PF12034 Domain of unknown function (DUF3520) PMA3_RS00495 PF12450 von Willebrand factor PMA3_RS00495 PF00092 von Willebrand factor type A domain PMA3_RS00500 PF04542 Sigma-70 region 2 PMA3_RS00500 PF08281 Sigma-70, region 4 PMA3_RS00520 PF00072 Response regulator receiver domain PMA3_RS00520 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS00525 PF05230 MASE2 domain PMA3_RS00525 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS00535 PF00171 Aldehyde dehydrogenase family PMA3_RS00540 PF00202 Aminotransferase class-III PMA3_RS00545 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS00545 PF00072 Response regulator receiver domain PMA3_RS00550 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS00550 PF08448 PAS fold PMA3_RS00560 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS00560 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS00560 PF00563 EAL domain PMA3_RS00575 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS00580 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS00585 PF12857 TOBE-like domain PMA3_RS00585 PF00005 ABC transporter PMA3_RS00595 PF00027 Cyclic nucleotide-binding domain PMA3_RS00595 PF13545 Crp-like helix-turn-helix domain PMA3_RS00600 PF00072 Response regulator receiver domain PMA3_RS00600 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS00605 PF12833 Helix-turn-helix domain PMA3_RS00605 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PMA3_RS00615 PF00158 Sigma-54 interaction domain PMA3_RS00620 PF03180 NLPA lipoprotein PMA3_RS00630 PF13476 AAA domain PMA3_RS00635 PF13533 Biotin-lipoyl like PMA3_RS00645 PF00873 AcrB/AcrD/AcrF family PMA3_RS00655 PF00891 O-methyltransferase domain PMA3_RS00655 PF16864 Dimerisation domain PMA3_RS00665 PF00248 Aldo/keto reductase family PMA3_RS00670 PF00195 Chalcone and stilbene synthases, N-terminal domain PMA3_RS00670 PF02797 Chalcone and stilbene synthases, C-terminal domain PMA3_RS00675 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS00680 PF09383 NIL domain PMA3_RS00680 PF00005 ABC transporter PMA3_RS00685 PF03180 NLPA lipoprotein PMA3_RS00690 PF00296 Luciferase-like monooxygenase PMA3_RS00695 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS00695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS00700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS00700 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS00710 PF00005 ABC transporter PMA3_RS00715 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS00720 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS00725 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS00730 PF00132 Bacterial transferase hexapeptide (six repeats) PMA3_RS00735 PF02028 BCCT, betaine/carnitine/choline family transporter PMA3_RS00750 PF00248 Aldo/keto reductase family PMA3_RS00755 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PMA3_RS00760 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS00765 PF00005 ABC transporter PMA3_RS00770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PMA3_RS00775 PF04262 Glutamate-cysteine ligase PMA3_RS00790 PF09371 Tex-like protein N-terminal domain PMA3_RS00790 PF00575 S1 RNA binding domain PMA3_RS00790 PF17674 HHH domain PMA3_RS00790 PF16921 Tex protein YqgF-like domain PMA3_RS00795 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS00795 PF00072 Response regulator receiver domain PMA3_RS00800 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS00800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS00800 PF00672 HAMP domain PMA3_RS00805 PF18030 RimK PreATP-grasp domain PMA3_RS00805 PF08443 RimK-like ATP-grasp domain PMA3_RS00810 PF08443 RimK-like ATP-grasp domain PMA3_RS00810 PF18030 RimK PreATP-grasp domain PMA3_RS00815 PF08495 FIST N domain PMA3_RS00815 PF00563 EAL domain PMA3_RS00815 PF10442 FIST C domain PMA3_RS00815 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS00820 PF01479 S4 domain PMA3_RS00825 PF01430 Hsp33 protein PMA3_RS00830 PF01293 Phosphoenolpyruvate carboxykinase PMA3_RS00850 PF12951 Passenger-associated-transport-repeat PMA3_RS00850 PF00082 Subtilase family PMA3_RS00850 PF03797 Autotransporter beta-domain PMA3_RS00855 PF16124 RecQ zinc-binding PMA3_RS00855 PF00270 DEAD/DEAH box helicase PMA3_RS00855 PF00271 Helicase conserved C-terminal domain PMA3_RS00855 PF00570 HRDC domain PMA3_RS00855 PF09382 RQC domain PMA3_RS00870 PF00384 Molybdopterin oxidoreductase PMA3_RS00875 PF02634 FdhD/NarQ family PMA3_RS00880 PF03466 LysR substrate binding domain PMA3_RS00880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS00885 PF04972 BON domain PMA3_RS00885 PF01476 LysM domain PMA3_RS00890 PF13419 Haloacid dehalogenase-like hydrolase PMA3_RS00895 PF00293 NUDIX domain PMA3_RS00900 PF00459 Inositol monophosphatase family PMA3_RS00910 PF00072 Response regulator receiver domain PMA3_RS00910 PF00158 Sigma-54 interaction domain PMA3_RS00910 PF02954 Bacterial regulatory protein, Fis family PMA3_RS00915 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS00915 PF02743 Cache domain PMA3_RS00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS00920 PF00202 Aminotransferase class-III PMA3_RS00925 PF00795 Carbon-nitrogen hydrolase PMA3_RS00930 PF04371 Porphyromonas-type peptidyl-arginine deiminase PMA3_RS00940 PF03573 outer membrane porin, OprD family PMA3_RS00945 PF13784 Fic/DOC family N-terminal PMA3_RS00945 PF02661 Fic/DOC family PMA3_RS00965 PF01361 Tautomerase enzyme PMA3_RS00995 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS01000 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS01005 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS01010 PF00005 ABC transporter PMA3_RS01015 PF00324 Amino acid permease PMA3_RS01035 PF06250 YhcG PDDEXK nuclease domain PMA3_RS01035 PF17761 DUF1016 N-terminal domain PMA3_RS01045 PF01925 Sulfite exporter TauE/SafE PMA3_RS01060 PF04362 Bacterial Fe(2+) trafficking PMA3_RS01065 PF00633 Helix-hairpin-helix motif PMA3_RS01065 PF14815 NUDIX domain PMA3_RS01065 PF10576 Iron-sulfur binding domain of endonuclease III PMA3_RS01065 PF00730 HhH-GPD superfamily base excision DNA repair protein PMA3_RS01075 PF00475 Imidazoleglycerol-phosphate dehydratase PMA3_RS01080 PF00117 Glutamine amidotransferase class-I PMA3_RS01090 PF00977 Histidine biosynthesis protein PMA3_RS01095 PF00977 Histidine biosynthesis protein PMA3_RS01115 PF04748 Divergent polysaccharide deacetylase PMA3_RS01120 PF13180 PDZ domain PMA3_RS01120 PF03572 Peptidase family S41 PMA3_RS01125 PF01551 Peptidase family M23 PMA3_RS01130 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PMA3_RS01130 PF01676 Metalloenzyme superfamily PMA3_RS01140 PF00462 Glutaredoxin PMA3_RS01145 PF02556 Preprotein translocase subunit SecB PMA3_RS01150 PF00588 SpoU rRNA Methylase family PMA3_RS01165 PF02954 Bacterial regulatory protein, Fis family PMA3_RS01165 PF00072 Response regulator receiver domain PMA3_RS01165 PF00158 Sigma-54 interaction domain PMA3_RS01170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS01170 PF00989 PAS fold PMA3_RS01170 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS01185 PF00120 Glutamine synthetase, catalytic domain PMA3_RS01185 PF03951 Glutamine synthetase, beta-Grasp domain PMA3_RS01190 PF02926 THUMP domain PMA3_RS01190 PF02568 Thiamine biosynthesis protein (ThiI) PMA3_RS01195 PF00679 Elongation factor G C-terminus PMA3_RS01195 PF00009 Elongation factor Tu GTP binding domain PMA3_RS01195 PF03144 Elongation factor Tu domain 2 PMA3_RS01210 PF00343 Carbohydrate phosphorylase PMA3_RS01225 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PMA3_RS01245 PF08212 Lipocalin-like domain PMA3_RS01250 PF01979 Amidohydrolase family PMA3_RS01255 PF07702 UTRA domain PMA3_RS01255 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS01260 PF05962 HutD PMA3_RS01265 PF17391 Urocanase N-terminal domain PMA3_RS01265 PF17392 Urocanase C-terminal domain PMA3_RS01265 PF01175 Urocanase Rossmann-like domain PMA3_RS01270 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PMA3_RS01280 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS01285 PF00005 ABC transporter PMA3_RS01285 PF00571 CBS domain PMA3_RS01290 PF00221 Aromatic amino acid lyase PMA3_RS01295 PF00221 Aromatic amino acid lyase PMA3_RS01300 PF01979 Amidohydrolase family PMA3_RS01310 PF00561 alpha/beta hydrolase fold PMA3_RS01315 PF02580 D-Tyr-tRNA(Tyr) deacylase PMA3_RS01320 PF04349 Periplasmic glucan biosynthesis protein, MdoG PMA3_RS01325 PF00535 Glycosyl transferase family 2 PMA3_RS01330 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS01335 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS01340 PF00005 ABC transporter PMA3_RS01345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS01345 PF00672 HAMP domain PMA3_RS01345 PF16591 Helical bimodular sensor domain PMA3_RS01355 PF00902 Sec-independent protein translocase protein (TatC) PMA3_RS01360 PF02416 mttA/Hcf106 family PMA3_RS01365 PF02416 mttA/Hcf106 family PMA3_RS01370 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PMA3_RS01375 PF01502 Phosphoribosyl-AMP cyclohydrolase PMA3_RS01380 PF03109 ABC1 family PMA3_RS01390 PF01209 ubiE/COQ5 methyltransferase family PMA3_RS01410 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS01415 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PMA3_RS01420 PF00561 alpha/beta hydrolase fold PMA3_RS01425 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PMA3_RS01435 PF07724 AAA domain (Cdc48 subfamily) PMA3_RS01435 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS01440 PF00227 Proteasome subunit PMA3_RS01450 PF00750 tRNA synthetases class I (R) PMA3_RS01450 PF05746 DALR anticodon binding domain PMA3_RS01450 PF03485 Arginyl tRNA synthetase N terminal domain PMA3_RS01455 PF00270 DEAD/DEAH box helicase PMA3_RS01455 PF00271 Helicase conserved C-terminal domain PMA3_RS01455 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PMA3_RS01455 PF17764 3′ DNA-binding domain (3′BD) PMA3_RS01455 PF18074 Primosomal protein N C-terminal domain PMA3_RS01460 PF01197 Ribosomal protein L31 PMA3_RS01470 PF00390 Malic enzyme, N-terminal domain PMA3_RS01470 PF03949 Malic enzyme, NAD binding domain PMA3_RS01475 PF01548 Transposase PMA3_RS01475 PF02371 Transposase IS116/IS110/IS902 family PMA3_RS01480 PF00905 Penicillin binding protein transpeptidase domain PMA3_RS01480 PF00912 Transglycosylase PMA3_RS01480 PF17092 Penicillin-binding protein OB-like domain PMA3_RS01485 PF11104 Type IV pilus assembly protein PilM; PMA3_RS01490 PF05137 Fimbrial assembly protein (PilN) PMA3_RS01495 PF04350 Pilus assembly protein, PilO PMA3_RS01500 PF04351 Pilus assembly protein, PilP PMA3_RS01505 PF03958 Bacterial type II/III secretion system short domain PMA3_RS01505 PF00263 Bacterial type II and III secretion system protein PMA3_RS01505 PF11741 AMIN domain PMA3_RS01505 PF07660 Secretin and TonB N terminus short domain PMA3_RS01510 PF01202 Shikimate kinase PMA3_RS01515 PF01761 3-dehydroquinate synthase PMA3_RS01525 PF01645 Conserved region in glutamate synthase PMA3_RS01525 PF04898 Glutamate synthase central domain PMA3_RS01525 PF00310 Glutamine amidotransferases class-II PMA3_RS01525 PF01493 GXGXG motif PMA3_RS01530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PMA3_RS01530 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS01535 PF01208 Uroporphyrinogen decarboxylase (URO-D) PMA3_RS01540 PF07690 Major Facilitator Superfamily PMA3_RS01545 PF03466 LysR substrate binding domain PMA3_RS01545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS01555 PF01381 Helix-turn-helix PMA3_RS01580 PF06508 Queuosine biosynthesis protein QueC PMA3_RS01590 PF02801 Beta-ketoacyl synthase, C-terminal domain PMA3_RS01590 PF00109 Beta-ketoacyl synthase, N-terminal domain PMA3_RS01605 PF00109 Beta-ketoacyl synthase, N-terminal domain PMA3_RS01605 PF02801 Beta-ketoacyl synthase, C-terminal domain PMA3_RS01615 PF01494 FAD binding domain PMA3_RS01640 PF00221 Aromatic amino acid lyase PMA3_RS01655 PF00501 AMP-binding enzyme PMA3_RS01655 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS01665 PF00550 Phosphopantetheine attachment site PMA3_RS01670 PF00550 Phosphopantetheine attachment site PMA3_RS01685 PF13614 AAA domain PMA3_RS01690 PF00085 Thioredoxin PMA3_RS01695 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PMA3_RS01700 PF00924 Mechanosensitive ion channel PMA3_RS01700 PF12794 Mechanosensitive ion channel inner membrane domain 1 PMA3_RS01700 PF12795 Mechanosensitive ion channel porin domain PMA3_RS01705 PF03471 Transporter associated domain PMA3_RS01705 PF00999 Sodium/hydrogen exchanger family PMA3_RS01705 PF02080 TrkA-C domain PMA3_RS01720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS01720 PF02743 Cache domain PMA3_RS01720 PF00672 HAMP domain PMA3_RS01725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS01725 PF12806 Acetyl-CoA dehydrogenase C-terminal like PMA3_RS01725 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS01725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS01730 PF01619 Proline dehydrogenase PMA3_RS01730 PF00171 Aldehyde dehydrogenase family PMA3_RS01730 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PMA3_RS01730 PF14850 DNA-binding domain of Proline dehydrogenase PMA3_RS01735 PF00474 Sodium:solute symporter family PMA3_RS01740 PF05593 RHS Repeat PMA3_RS01740 PF03527 RHS protein PMA3_RS01745 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PMA3_RS01750 PF01625 Peptide methionine sulfoxide reductase PMA3_RS01755 PF00563 EAL domain PMA3_RS01755 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS01755 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS01765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PMA3_RS01765 PF00364 Biotin-requiring enzyme PMA3_RS01765 PF02817 e3 binding domain PMA3_RS01770 PF17831 Pyruvate dehydrogenase E1 component middle domain PMA3_RS01770 PF00456 Transketolase, thiamine diphosphate binding domain PMA3_RS01775 PF03710 Glutamate-ammonia ligase adenylyltransferase PMA3_RS01775 PF08335 GlnD PII-uridylyltransferase PMA3_RS01780 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PMA3_RS01785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PMA3_RS01790 PF13439 Glycosyltransferase Family 4 PMA3_RS01790 PF00534 Glycosyl transferases group 1 PMA3_RS01820 PF16861 Carbamoyltransferase C-terminus PMA3_RS01820 PF02543 Carbamoyltransferase N-terminus PMA3_RS01825 PF13439 Glycosyltransferase Family 4 PMA3_RS01825 PF00534 Glycosyl transferases group 1 PMA3_RS01850 PF13439 Glycosyltransferase Family 4 PMA3_RS01850 PF00534 Glycosyl transferases group 1 PMA3_RS01865 PF00005 ABC transporter PMA3_RS01865 PF00664 ABC transporter transmembrane region PMA3_RS01870 PF01467 Cytidylyltransferase-like PMA3_RS01870 PF00294 pfkB family carbohydrate kinase PMA3_RS01880 PF00248 Aldo/keto reductase family PMA3_RS01885 PF01266 FAD dependent oxidoreductase PMA3_RS01890 PF00893 Small Multidrug Resistance protein PMA3_RS01895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS01895 PF03466 LysR substrate binding domain PMA3_RS01900 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PMA3_RS01905 PF02321 Outer membrane efflux protein PMA3_RS01910 PF01964 Radical SAM ThiC family PMA3_RS01910 PF13667 ThiC-associated domain PMA3_RS01925 PF00293 NUDIX domain PMA3_RS01935 PF00149 Calcineurin-like phosphoesterase PMA3_RS01940 PF05728 Uncharacterised protein family (UPF0227) PMA3_RS01945 PF01751 Toprim domain PMA3_RS01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS01945 PF00204 DNA gyrase B PMA3_RS01945 PF00986 DNA gyrase B subunit, carboxyl terminus PMA3_RS01960 PF00521 DNA gyrase/topoisomerase IV, subunit A PMA3_RS01960 PF03989 DNA gyrase C-terminal domain, beta-propeller PMA3_RS01985 PF17882 OAA-family lectin sugar binding domain PMA3_RS01990 PF02666 Phosphatidylserine decarboxylase PMA3_RS01995 PF00581 Rhodanese-like domain PMA3_RS02005 PF01618 MotA/TolQ/ExbB proton channel family PMA3_RS02010 PF13677 Membrane MotB of proton-channel complex MotA/MotB PMA3_RS02010 PF00691 OmpA family PMA3_RS02015 PF03193 RsgA GTPase PMA3_RS02020 PF00929 Exonuclease PMA3_RS02025 PF03458 UPF0126 domain PMA3_RS02030 PF08331 Domain of unknown function (DUF1730) PMA3_RS02035 PF03853 YjeF-related protein N-terminus PMA3_RS02035 PF01256 Carbohydrate kinase PMA3_RS02040 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PMA3_RS02045 PF11741 AMIN domain PMA3_RS02045 PF01520 N-acetylmuramoyl-L-alanine amidase PMA3_RS02050 PF08676 MutL C terminal dimerisation domain PMA3_RS02050 PF01119 DNA mismatch repair protein, C-terminal domain PMA3_RS02060 PF17209 Hfq protein PMA3_RS02065 PF16360 GTP-binding GTPase Middle Region PMA3_RS02065 PF01926 50S ribosome-binding GTPase PMA3_RS02065 PF13167 GTP-binding GTPase N-terminal PMA3_RS02070 PF01145 SPFH domain / Band 7 family PMA3_RS02075 PF01145 SPFH domain / Band 7 family PMA3_RS02080 PF13393 Histidyl-tRNA synthetase PMA3_RS02085 PF00709 Adenylosuccinate synthetase PMA3_RS02090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS02090 PF00672 HAMP domain PMA3_RS02095 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS02100 PF01547 Bacterial extracellular solute-binding protein PMA3_RS02115 PF00773 RNB domain PMA3_RS02115 PF08206 Ribonuclease B OB domain PMA3_RS02115 PF08461 Ribonuclease R winged-helix domain PMA3_RS02115 PF00575 S1 RNA binding domain PMA3_RS02115 PF17876 Cold shock domain PMA3_RS02120 PF00588 SpoU rRNA Methylase family PMA3_RS02120 PF08032 RNA 2'-O ribose methyltransferase substrate binding PMA3_RS02125 PF01250 Ribosomal protein S6 PMA3_RS02130 PF01084 Ribosomal protein S18 PMA3_RS02140 PF01281 Ribosomal protein L9, N-terminal domain PMA3_RS02140 PF03948 Ribosomal protein L9, C-terminal domain PMA3_RS02145 PF03796 DnaB-like helicase C terminal domain PMA3_RS02145 PF00772 DnaB-like helicase N terminal domain PMA3_RS02165 PF04055 Radical SAM superfamily PMA3_RS02165 PF11842 Domain of unknown function (DUF3362) PMA3_RS02165 PF08497 Radical SAM N-terminal PMA3_RS02175 PF14403 Circularly permuted ATP-grasp type 2 PMA3_RS02175 PF04168 A predicted alpha-helical domain with a conserved ER motif. PMA3_RS02195 PF03641 Possible lysine decarboxylase PMA3_RS02200 PF00127 Copper binding proteins, plastocyanin/azurin family PMA3_RS02205 PF02540 NAD synthase PMA3_RS02210 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PMA3_RS02210 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PMA3_RS02215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS02215 PF03466 LysR substrate binding domain PMA3_RS02220 PF00171 Aldehyde dehydrogenase family PMA3_RS02225 PF01266 FAD dependent oxidoreductase PMA3_RS02230 PF13458 Periplasmic binding protein PMA3_RS02235 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS02240 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS02240 PF11862 Domain of unknown function (DUF3382) PMA3_RS02245 PF12399 Branched-chain amino acid ATP-binding cassette transporter PMA3_RS02245 PF00005 ABC transporter PMA3_RS02250 PF00005 ABC transporter PMA3_RS02260 PF00106 short chain dehydrogenase PMA3_RS02270 PF04955 HupE / UreJ protein PMA3_RS02275 PF02492 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS02280 PF01730 UreF PMA3_RS02285 PF05194 UreE urease accessory protein, C-terminal domain PMA3_RS02285 PF02814 UreE urease accessory protein, N-terminal domain PMA3_RS02290 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS02300 PF05170 AsmA family PMA3_RS02330 PF00561 alpha/beta hydrolase fold PMA3_RS02335 PF00892 EamA-like transporter family PMA3_RS02340 PF02311 AraC-like ligand binding domain PMA3_RS02340 PF12833 Helix-turn-helix domain PMA3_RS02345 PF07769 psiF repeat PMA3_RS02355 PF00012 Hsp70 protein PMA3_RS02360 PF01556 DnaJ C terminal domain PMA3_RS02360 PF00226 DnaJ domain PMA3_RS02370 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS02370 PF08446 PAS fold PMA3_RS02370 PF00360 Phytochrome region PMA3_RS02370 PF01590 GAF domain PMA3_RS02370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS02380 PF14496 C-terminal novel E3 ligase, LRR-interacting PMA3_RS02385 PF00449 Urease alpha-subunit, N-terminal domain PMA3_RS02385 PF01979 Amidohydrolase family PMA3_RS02390 PF00699 Urease beta subunit PMA3_RS02395 PF13673 Acetyltransferase (GNAT) domain PMA3_RS02405 PF00547 Urease, gamma subunit PMA3_RS02410 PF01774 UreD urease accessory protein PMA3_RS02415 PF00005 ABC transporter PMA3_RS02420 PF00005 ABC transporter PMA3_RS02420 PF12399 Branched-chain amino acid ATP-binding cassette transporter PMA3_RS02430 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS02435 PF13458 Periplasmic binding protein PMA3_RS02475 PF02571 Precorrin-6x reductase CbiJ/CobK PMA3_RS02480 PF01888 CbiD PMA3_RS02485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PMA3_RS02495 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PMA3_RS02495 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PMA3_RS02500 PF02570 Precorrin-8X methylmutase PMA3_RS02505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PMA3_RS02510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PMA3_RS02520 PF01914 MarC family integral membrane protein PMA3_RS02525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS02525 PF00672 HAMP domain PMA3_RS02525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PMA3_RS02525 PF00072 Response regulator receiver domain PMA3_RS02525 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS02525 PF01627 Hpt domain PMA3_RS02530 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PMA3_RS02530 PF02843 Phosphoribosylglycinamide synthetase, C domain PMA3_RS02530 PF02844 Phosphoribosylglycinamide synthetase, N domain PMA3_RS02535 PF01808 AICARFT/IMPCHase bienzyme PMA3_RS02535 PF02142 MGS-like domain PMA3_RS02540 PF02954 Bacterial regulatory protein, Fis family PMA3_RS02545 PF01207 Dihydrouridine synthase (Dus) PMA3_RS02560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PMA3_RS02560 PF02785 Biotin carboxylase C-terminal domain PMA3_RS02560 PF00289 Biotin carboxylase, N-terminal domain PMA3_RS02565 PF00364 Biotin-requiring enzyme PMA3_RS02570 PF01220 Dehydroquinase class II PMA3_RS02575 PF02683 Cytochrome C biogenesis protein transmembrane region PMA3_RS02575 PF11412 Disulphide bond corrector protein DsbC PMA3_RS02580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS02585 PF00072 Response regulator receiver domain PMA3_RS02585 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS02595 PF00293 NUDIX domain PMA3_RS02600 PF01253 Translation initiation factor SUI1 PMA3_RS02605 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PMA3_RS02605 PF17944 Arginine decarboxylase C-terminal helical extension PMA3_RS02605 PF17810 Arginine decarboxylase helical bundle domain PMA3_RS02610 PF04717 Type VI secretion system, phage-baseplate injector PMA3_RS02620 PF01554 MatE PMA3_RS02635 PF13847 Methyltransferase domain PMA3_RS02650 PF01575 MaoC like domain PMA3_RS02660 PF00108 Thiolase, N-terminal domain PMA3_RS02660 PF02803 Thiolase, C-terminal domain PMA3_RS02665 PF12833 Helix-turn-helix domain PMA3_RS02665 PF02311 AraC-like ligand binding domain PMA3_RS02680 PF09334 tRNA synthetases class I (M) PMA3_RS02680 PF13603 Leucyl-tRNA synthetase, Domain 2 PMA3_RS02680 PF00133 tRNA synthetases class I (I, L, M and V) PMA3_RS02680 PF08264 Anticodon-binding domain of tRNA PMA3_RS02690 PF02698 DUF218 domain PMA3_RS02695 PF00795 Carbon-nitrogen hydrolase PMA3_RS02700 PF03471 Transporter associated domain PMA3_RS02700 PF00571 CBS domain PMA3_RS02705 PF02130 Uncharacterized protein family UPF0054 PMA3_RS02710 PF02562 PhoH-like protein PMA3_RS02715 PF01938 TRAM domain PMA3_RS02715 PF04055 Radical SAM superfamily PMA3_RS02715 PF00919 Uncharacterized protein family UPF0004 PMA3_RS02730 PF00202 Aminotransferase class-III PMA3_RS02735 PF02581 Thiamine monophosphate synthase PMA3_RS02740 PF08543 Phosphomethylpyrimidine kinase PMA3_RS02745 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS02745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS02745 PF01627 Hpt domain PMA3_RS02745 PF00072 Response regulator receiver domain PMA3_RS02750 PF18158 Adaptive response protein AidB N-terminal domain PMA3_RS02750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS02750 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS02755 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus PMA3_RS02755 PF01048 Phosphorylase superfamily PMA3_RS02760 PF00849 RNA pseudouridylate synthase PMA3_RS02770 PF01037 Lrp/AsnC ligand binding domain PMA3_RS02780 PF01545 Cation efflux family PMA3_RS02780 PF16916 Dimerisation domain of Zinc Transporter PMA3_RS02790 PF04408 Helicase associated domain (HA2) PMA3_RS02790 PF08482 ATP-dependent helicase C-terminal PMA3_RS02790 PF00271 Helicase conserved C-terminal domain PMA3_RS02790 PF00270 DEAD/DEAH box helicase PMA3_RS02810 PF07687 Peptidase dimerisation domain PMA3_RS02810 PF01546 Peptidase family M20/M25/M40 PMA3_RS02820 PF00171 Aldehyde dehydrogenase family PMA3_RS02830 PF00324 Amino acid permease PMA3_RS02835 PF00202 Aminotransferase class-III PMA3_RS02845 PF01042 Endoribonuclease L-PSP PMA3_RS02860 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) PMA3_RS02870 PF04851 Type III restriction enzyme, res subunit PMA3_RS02870 PF13307 Helicase C-terminal domain PMA3_RS02870 PF00929 Exonuclease PMA3_RS02880 PF01037 Lrp/AsnC ligand binding domain PMA3_RS02880 PF13404 AsnC-type helix-turn-helix domain PMA3_RS02885 PF00892 EamA-like transporter family PMA3_RS02890 PF00270 DEAD/DEAH box helicase PMA3_RS02890 PF00271 Helicase conserved C-terminal domain PMA3_RS02895 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS02895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS02900 PF00850 Histone deacetylase domain PMA3_RS02905 PF13302 Acetyltransferase (GNAT) domain PMA3_RS02925 PF04228 Putative neutral zinc metallopeptidase PMA3_RS02930 PF04228 Putative neutral zinc metallopeptidase PMA3_RS02940 PF00892 EamA-like transporter family PMA3_RS02945 PF07690 Major Facilitator Superfamily PMA3_RS02950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PMA3_RS02950 PF01261 Xylose isomerase-like TIM barrel PMA3_RS02955 PF17938 Tetracyclin repressor-like, C-terminal domain PMA3_RS02955 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS02960 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PMA3_RS02960 PF08501 Shikimate dehydrogenase substrate binding domain PMA3_RS02965 PF01220 Dehydroquinase class II PMA3_RS02970 PF03466 LysR substrate binding domain PMA3_RS02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS02985 PF05958 tRNA (Uracil-5-)-methyltransferase PMA3_RS02990 PF00860 Permease family PMA3_RS03000 PF01965 DJ-1/PfpI family PMA3_RS03005 PF01381 Helix-turn-helix PMA3_RS03015 PF01654 Cytochrome bd terminal oxidase subunit I PMA3_RS03020 PF02322 Cytochrome bd terminal oxidase subunit II PMA3_RS03030 PF05175 Methyltransferase small domain PMA3_RS03035 PF03472 Autoinducer binding domain PMA3_RS03035 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS03040 PF00970 Oxidoreductase FAD-binding domain PMA3_RS03040 PF00175 Oxidoreductase NAD-binding domain PMA3_RS03045 PF01741 Large-conductance mechanosensitive channel, MscL PMA3_RS03050 PF18073 Rubredoxin metal binding domain PMA3_RS03055 PF07238 PilZ domain PMA3_RS03060 PF02554 Carbon starvation protein CstA PMA3_RS03060 PF13722 5TM C-terminal transporter carbon starvation CstA PMA3_RS03065 PF04328 Selenoprotein, putative PMA3_RS03070 PF02492 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS03070 PF07683 Cobalamin synthesis protein cobW C-terminal domain PMA3_RS03080 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS03080 PF07729 FCD domain PMA3_RS03085 PF00375 Sodium:dicarboxylate symporter family PMA3_RS03090 PF00464 Serine hydroxymethyltransferase PMA3_RS03095 PF00563 EAL domain PMA3_RS03095 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS03095 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS03100 PF00005 ABC transporter PMA3_RS03100 PF12848 ABC transporter PMA3_RS03105 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PMA3_RS03105 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PMA3_RS03110 PF03449 Transcription elongation factor, N-terminal PMA3_RS03110 PF01272 Transcription elongation factor, GreA/GreB, C-term PMA3_RS03130 PF05362 Lon protease (S16) C-terminal proteolytic domain PMA3_RS03130 PF13654 AAA domain PMA3_RS03145 PF03350 Uncharacterized protein family, UPF0114 PMA3_RS03155 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PMA3_RS03155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PMA3_RS03160 PF00132 Bacterial transferase hexapeptide (six repeats) PMA3_RS03160 PF12804 MobA-like NTP transferase domain PMA3_RS03165 PF08274 PhnA Zinc-Ribbon PMA3_RS03165 PF03831 PhnA domain PMA3_RS03170 PF00348 Polyprenyl synthetase PMA3_RS03175 PF00829 Ribosomal prokaryotic L21 protein PMA3_RS03180 PF01016 Ribosomal L27 protein PMA3_RS03185 PF01018 GTP1/OBG PMA3_RS03185 PF01926 50S ribosome-binding GTPase PMA3_RS03190 PF01472 PUA domain PMA3_RS03190 PF00696 Amino acid kinase family PMA3_RS03195 PF05981 CreA protein PMA3_RS03200 PF01649 Ribosomal protein S20 PMA3_RS03205 PF03023 Lipid II flippase MurJ PMA3_RS03210 PF01687 Riboflavin kinase PMA3_RS03210 PF06574 FAD synthetase PMA3_RS03215 PF00133 tRNA synthetases class I (I, L, M and V) PMA3_RS03215 PF08264 Anticodon-binding domain of tRNA PMA3_RS03215 PF06827 Zinc finger found in FPG and IleRS PMA3_RS03220 PF01252 Signal peptidase (SPase) II PMA3_RS03225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PMA3_RS03230 PF02401 LytB protein PMA3_RS03240 PF07963 Prokaryotic N-terminal methylation motif PMA3_RS03240 PF00114 Pilin (bacterial filament) PMA3_RS03260 PF05567 Neisseria PilC beta-propeller domain PMA3_RS03265 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor PMA3_RS03265 PF07963 Prokaryotic N-terminal methylation motif PMA3_RS03270 PF01266 FAD dependent oxidoreductase PMA3_RS03275 PF00072 Response regulator receiver domain PMA3_RS03275 PF02954 Bacterial regulatory protein, Fis family PMA3_RS03275 PF00158 Sigma-54 interaction domain PMA3_RS03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS03280 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS03290 PF13525 Outer membrane lipoprotein PMA3_RS03295 PF01479 S4 domain PMA3_RS03295 PF00849 RNA pseudouridylate synthase PMA3_RS03300 PF02578 Multi-copper polyphenol oxidoreductase laccase PMA3_RS03305 PF17871 AAA lid domain PMA3_RS03305 PF10431 C-terminal, D2-small domain, of ClpB protein PMA3_RS03305 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS03305 PF02861 Clp amino terminal domain, pathogenicity island component PMA3_RS03305 PF07724 AAA domain (Cdc48 subfamily) PMA3_RS03335 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS03355 PF07690 Major Facilitator Superfamily PMA3_RS03360 PF03594 Benzoate membrane transport protein PMA3_RS03365 PF03573 outer membrane porin, OprD family PMA3_RS03375 PF03466 LysR substrate binding domain PMA3_RS03375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS03390 PF03884 DNA gyrase inhibitor YacG PMA3_RS03395 PF01121 Dephospho-CoA kinase PMA3_RS03400 PF01478 Type IV leader peptidase family PMA3_RS03400 PF06750 Bacterial Peptidase A24 N-terminal domain PMA3_RS03405 PF00482 Type II secretion system (T2SS), protein F PMA3_RS03410 PF00437 Type II/IV secretion system protein PMA3_RS03410 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PMA3_RS03415 PF07963 Prokaryotic N-terminal methylation motif PMA3_RS03415 PF00114 Pilin (bacterial filament) PMA3_RS03420 PF04972 BON domain PMA3_RS03435 PF10672 S-adenosylmethionine-dependent methyltransferase PMA3_RS03435 PF17785 PUA-like domain PMA3_RS03445 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS03445 PF00501 AMP-binding enzyme PMA3_RS03445 PF16177 Acetyl-coenzyme A synthetase N-terminus PMA3_RS03450 PF00342 Phosphoglucose isomerase PMA3_RS03455 PF02569 Pantoate-beta-alanine ligase PMA3_RS03460 PF02548 Ketopantoate hydroxymethyltransferase PMA3_RS03465 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PMA3_RS03470 PF12626 Polymerase A arginine-rich C-terminus PMA3_RS03470 PF01743 Poly A polymerase head domain PMA3_RS03470 PF12627 Probable RNA and SrmB- binding site of polymerase A PMA3_RS03475 PF00072 Response regulator receiver domain PMA3_RS03475 PF00158 Sigma-54 interaction domain PMA3_RS03475 PF02954 Bacterial regulatory protein, Fis family PMA3_RS03480 PF00989 PAS fold PMA3_RS03480 PF08447 PAS fold PMA3_RS03480 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS03485 PF00749 tRNA synthetases class I (E and Q), catalytic domain PMA3_RS03490 PF01258 Prokaryotic dksA/traR C4-type zinc finger PMA3_RS03495 PF00155 Aminotransferase class I and II PMA3_RS03500 PF17746 SfsA N-terminal OB domain PMA3_RS03500 PF03749 Sugar fermentation stimulation protein RE domain PMA3_RS03510 PF01497 Periplasmic binding protein PMA3_RS03515 PF01032 FecCD transport family PMA3_RS03520 PF00005 ABC transporter PMA3_RS03535 PF04717 Type VI secretion system, phage-baseplate injector PMA3_RS03535 PF01471 Putative peptidoglycan binding domain PMA3_RS03560 PF14814 Bifunctional transglycosylase second domain PMA3_RS03560 PF00905 Penicillin binding protein transpeptidase domain PMA3_RS03560 PF00912 Transglycosylase PMA3_RS03570 PF04287 tRNA pseudouridine synthase C PMA3_RS03570 PF00849 RNA pseudouridylate synthase PMA3_RS03580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PMA3_RS03580 PF00205 Thiamine pyrophosphate enzyme, central domain PMA3_RS03580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PMA3_RS03585 PF10369 Small subunit of acetolactate synthase PMA3_RS03590 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PMA3_RS03590 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PMA3_RS03595 PF01066 CDP-alcohol phosphatidyltransferase PMA3_RS03600 PF00174 Oxidoreductase molybdopterin binding domain PMA3_RS03605 PF01794 Ferric reductase like transmembrane component PMA3_RS03635 PF04403 Paraquat-inducible protein A PMA3_RS03640 PF04403 Paraquat-inducible protein A PMA3_RS03645 PF02470 MlaD protein PMA3_RS03670 PF00583 Acetyltransferase (GNAT) family PMA3_RS03680 PF00484 Carbonic anhydrase PMA3_RS03695 PF02667 Short chain fatty acid transporter PMA3_RS03700 PF07690 Major Facilitator Superfamily PMA3_RS03700 PF00083 Sugar (and other) transporter PMA3_RS03705 PF07478 D-ala D-ala ligase C-terminus PMA3_RS03705 PF01820 D-ala D-ala ligase N-terminus PMA3_RS03720 PF07690 Major Facilitator Superfamily PMA3_RS03725 PF01926 50S ribosome-binding GTPase PMA3_RS03725 PF06071 Protein of unknown function (DUF933) PMA3_RS03730 PF01195 Peptidyl-tRNA hydrolase PMA3_RS03735 PF14693 Ribosomal protein TL5, C-terminal domain PMA3_RS03735 PF01386 Ribosomal L25p family PMA3_RS03740 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PMA3_RS03740 PF14572 Phosphoribosyl synthetase-associated domain PMA3_RS03750 PF08544 GHMP kinases C terminal PMA3_RS03750 PF00288 GHMP kinases N terminal domain PMA3_RS03755 PF03550 Outer membrane lipoprotein LolB PMA3_RS03765 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PMA3_RS03765 PF01488 Shikimate / quinate 5-dehydrogenase PMA3_RS03765 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PMA3_RS03770 PF03462 PCRF domain PMA3_RS03770 PF00472 RF-1 domain PMA3_RS03775 PF05175 Methyltransferase small domain PMA3_RS03775 PF17827 PrmC N-terminal domain PMA3_RS03780 PF00899 ThiF family PMA3_RS03785 PF01177 Asp/Glu/Hydantoin racemase PMA3_RS03790 PF09411 Lipid A 3-O-deacylase (PagL) PMA3_RS03800 PF01593 Flavin containing amine oxidoreductase PMA3_RS03805 PF00106 short chain dehydrogenase PMA3_RS03810 PF03441 FAD binding domain of DNA photolyase PMA3_RS03810 PF00875 DNA photolyase PMA3_RS03815 PF13411 MerR HTH family regulatory protein PMA3_RS03820 PF08349 Protein of unknown function (DUF1722) PMA3_RS03825 PF01593 Flavin containing amine oxidoreductase PMA3_RS03830 PF08338 Domain of unknown function (DUF1731) PMA3_RS03830 PF01370 NAD dependent epimerase/dehydratase family PMA3_RS03835 PF00762 Ferrochelatase PMA3_RS03840 PF00860 Permease family PMA3_RS03850 PF00156 Phosphoribosyl transferase domain PMA3_RS03870 PF06039 Malate:quinone oxidoreductase (Mqo) PMA3_RS03905 PF02586 SOS response associated peptidase (SRAP) PMA3_RS03910 PF01435 Peptidase family M48 PMA3_RS03915 PF01169 Uncharacterized protein family UPF0016 PMA3_RS03920 PF05175 Methyltransferase small domain PMA3_RS03920 PF08468 Methyltransferase small domain N-terminal PMA3_RS03925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMA3_RS03925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PMA3_RS03930 PF01810 LysE type translocator PMA3_RS03935 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS03935 PF00501 AMP-binding enzyme PMA3_RS03945 PF07044 Protein of unknown function (DUF1329) PMA3_RS03950 PF17874 MalT-like TPR region PMA3_RS03950 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS03960 PF00092 von Willebrand factor type A domain PMA3_RS03970 PF00753 Metallo-beta-lactamase superfamily PMA3_RS03975 PF00691 OmpA family PMA3_RS03990 PF00579 tRNA synthetases class I (W and Y) PMA3_RS03995 PF03969 AFG1-like ATPase PMA3_RS04000 PF00710 Asparaginase, N-terminal PMA3_RS04000 PF17763 Glutaminase/Asparaginase C-terminal domain PMA3_RS04010 PF00795 Carbon-nitrogen hydrolase PMA3_RS04025 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS04025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS04025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS04030 PF00248 Aldo/keto reductase family PMA3_RS04035 PF00572 Ribosomal protein L13 PMA3_RS04040 PF00380 Ribosomal protein S9/S16 PMA3_RS04045 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PMA3_RS04045 PF00355 Rieske [2Fe-2S] domain PMA3_RS04050 PF00033 Cytochrome b/b6/petB PMA3_RS04050 PF00032 Cytochrome b(C-terminal)/b6/petD PMA3_RS04055 PF02167 Cytochrome C1 family PMA3_RS04060 PF00043 Glutathione S-transferase, C-terminal domain PMA3_RS04060 PF02798 Glutathione S-transferase, N-terminal domain PMA3_RS04065 PF04386 Stringent starvation protein B PMA3_RS04070 PF04972 BON domain PMA3_RS04075 PF13580 SIS domain PMA3_RS04085 PF04348 LppC putative lipoprotein PMA3_RS04090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PMA3_RS04100 PF02381 MraZ protein, putative antitoxin-like PMA3_RS04105 PF01795 MraW methylase family PMA3_RS04110 PF04999 Cell division protein FtsL PMA3_RS04115 PF00905 Penicillin binding protein transpeptidase domain PMA3_RS04115 PF03717 Penicillin-binding Protein dimerisation domain PMA3_RS04120 PF01225 Mur ligase family, catalytic domain PMA3_RS04120 PF02875 Mur ligase family, glutamate ligase domain PMA3_RS04120 PF08245 Mur ligase middle domain PMA3_RS04125 PF02875 Mur ligase family, glutamate ligase domain PMA3_RS04125 PF08245 Mur ligase middle domain PMA3_RS04125 PF01225 Mur ligase family, catalytic domain PMA3_RS04130 PF00953 Glycosyl transferase family 4 PMA3_RS04130 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PMA3_RS04135 PF08245 Mur ligase middle domain PMA3_RS04135 PF02875 Mur ligase family, glutamate ligase domain PMA3_RS04140 PF01098 Cell cycle protein PMA3_RS04145 PF04101 Glycosyltransferase family 28 C-terminal domain PMA3_RS04145 PF03033 Glycosyltransferase family 28 N-terminal domain PMA3_RS04150 PF02875 Mur ligase family, glutamate ligase domain PMA3_RS04150 PF08245 Mur ligase middle domain PMA3_RS04150 PF01225 Mur ligase family, catalytic domain PMA3_RS04155 PF07478 D-ala D-ala ligase C-terminus PMA3_RS04155 PF01820 D-ala D-ala ligase N-terminus PMA3_RS04160 PF03799 Cell division protein FtsQ PMA3_RS04160 PF08478 POTRA domain, FtsQ-type PMA3_RS04165 PF02491 SHS2 domain inserted in FTSA PMA3_RS04170 PF00091 Tubulin/FtsZ family, GTPase domain PMA3_RS04170 PF12327 FtsZ family, C-terminal domain PMA3_RS04175 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PMA3_RS04180 PF00563 EAL domain PMA3_RS04180 PF01590 GAF domain PMA3_RS04180 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS04180 PF00360 Phytochrome region PMA3_RS04190 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS04190 PF00672 HAMP domain PMA3_RS04190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS04195 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS04195 PF00072 Response regulator receiver domain PMA3_RS04200 PF00873 AcrB/AcrD/AcrF family PMA3_RS04205 PF13533 Biotin-lipoyl like PMA3_RS04230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS04230 PF08448 PAS fold PMA3_RS04230 PF13188 PAS domain PMA3_RS04230 PF00072 Response regulator receiver domain PMA3_RS04230 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS04235 PF00158 Sigma-54 interaction domain PMA3_RS04235 PF01590 GAF domain PMA3_RS04240 PF00970 Oxidoreductase FAD-binding domain PMA3_RS04240 PF00175 Oxidoreductase NAD-binding domain PMA3_RS04240 PF00042 Globin PMA3_RS04245 PF08348 YheO-like PAS domain PMA3_RS04245 PF13309 HTH domain PMA3_RS04250 PF01266 FAD dependent oxidoreductase PMA3_RS04255 PF02423 Ornithine cyclodeaminase/mu-crystallin family PMA3_RS04260 PF00270 DEAD/DEAH box helicase PMA3_RS04260 PF00271 Helicase conserved C-terminal domain PMA3_RS04265 PF02230 Phospholipase/Carboxylesterase PMA3_RS04270 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS04275 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS04280 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS04285 PF00005 ABC transporter PMA3_RS04290 PF07729 FCD domain PMA3_RS04290 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS04295 PF07690 Major Facilitator Superfamily PMA3_RS04305 PF01541 GIY-YIG catalytic domain PMA3_RS04320 PF04245 37-kD nucleoid-associated bacterial protein PMA3_RS04325 PF00216 Bacterial DNA-binding protein PMA3_RS04330 PF05971 RNA methyltransferase PMA3_RS04335 PF00133 tRNA synthetases class I (I, L, M and V) PMA3_RS04335 PF10458 Valyl tRNA synthetase tRNA binding arm PMA3_RS04335 PF08264 Anticodon-binding domain of tRNA PMA3_RS04345 PF04364 DNA polymerase III chi subunit, HolC PMA3_RS04350 PF00883 Cytosol aminopeptidase family, catalytic domain PMA3_RS04350 PF02789 Cytosol aminopeptidase family, N-terminal domain PMA3_RS04355 PF03739 Lipopolysaccharide export system permease LptF/LptG PMA3_RS04360 PF03739 Lipopolysaccharide export system permease LptF/LptG PMA3_RS04365 PF00009 Elongation factor Tu GTP binding domain PMA3_RS04365 PF03144 Elongation factor Tu domain 2 PMA3_RS04365 PF00679 Elongation factor G C-terminus PMA3_RS04365 PF06421 GTP-binding protein LepA C-terminus PMA3_RS04370 PF10502 Signal peptidase, peptidase S26 PMA3_RS04375 PF00035 Double-stranded RNA binding motif PMA3_RS04375 PF14622 Ribonuclease-III-like PMA3_RS04380 PF01926 50S ribosome-binding GTPase PMA3_RS04380 PF07650 KH domain PMA3_RS04385 PF02565 Recombination protein O C terminal PMA3_RS04385 PF11967 Recombination protein O N terminal PMA3_RS04390 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PMA3_RS04395 PF01464 Transglycosylase SLT domain PMA3_RS04395 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS04400 PF02769 AIR synthase related protein, C-terminal domain PMA3_RS04400 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PMA3_RS04400 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PMA3_RS04405 PF01784 NIF3 (NGG1p interacting factor 3) PMA3_RS04415 PF09297 NADH pyrophosphatase zinc ribbon domain PMA3_RS04415 PF00293 NUDIX domain PMA3_RS04420 PF00293 NUDIX domain PMA3_RS04425 PF00132 Bacterial transferase hexapeptide (six repeats) PMA3_RS04435 PF02222 ATP-grasp domain PMA3_RS04440 PF00083 Sugar (and other) transporter PMA3_RS04440 PF07690 Major Facilitator Superfamily PMA3_RS04445 PF01595 Cyclin M transmembrane N-terminal domain PMA3_RS04445 PF00571 CBS domain PMA3_RS04445 PF03471 Transporter associated domain PMA3_RS04455 PF02978 Signal peptide binding domain PMA3_RS04455 PF02881 SRP54-type protein, helical bundle domain PMA3_RS04455 PF00448 SRP54-type protein, GTPase domain PMA3_RS04460 PF00886 Ribosomal protein S16 PMA3_RS04465 PF05239 PRC-barrel domain PMA3_RS04465 PF01782 RimM N-terminal domain PMA3_RS04470 PF01746 tRNA (Guanine-1)-methyltransferase PMA3_RS04475 PF01245 Ribosomal protein L19 PMA3_RS04480 PF02899 Phage integrase, N-terminal SAM-like domain PMA3_RS04480 PF00589 Phage integrase family PMA3_RS04485 PF13098 Thioredoxin-like domain PMA3_RS04485 PF10411 Disulfide bond isomerase protein N-terminus PMA3_RS04490 PF01842 ACT domain PMA3_RS04490 PF03447 Homoserine dehydrogenase, NAD binding domain PMA3_RS04490 PF00742 Homoserine dehydrogenase PMA3_RS04495 PF14821 Threonine synthase N terminus PMA3_RS04495 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS04500 PF00989 PAS fold PMA3_RS04500 PF00072 Response regulator receiver domain PMA3_RS04500 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS04500 PF01627 Hpt domain PMA3_RS04500 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS04500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS04515 PF02515 CoA-transferase family III PMA3_RS04520 PF07152 YaeQ protein PMA3_RS04525 PF17768 RecJ OB domain PMA3_RS04525 PF01368 DHH family PMA3_RS04525 PF02272 DHHA1 domain PMA3_RS04530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS04535 PF04349 Periplasmic glucan biosynthesis protein, MdoG PMA3_RS04545 PF00171 Aldehyde dehydrogenase family PMA3_RS04550 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS04555 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS04560 PF00005 ABC transporter PMA3_RS04560 PF08402 TOBE domain PMA3_RS04565 PF13416 Bacterial extracellular solute-binding protein PMA3_RS04575 PF12729 Four helix bundle sensory module for signal transduction PMA3_RS04575 PF00672 HAMP domain PMA3_RS04575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS04585 PF01739 CheR methyltransferase, SAM binding domain PMA3_RS04595 PF01627 Hpt domain PMA3_RS04595 PF01584 CheW-like domain PMA3_RS04595 PF00072 Response regulator receiver domain PMA3_RS04595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS04600 PF00072 Response regulator receiver domain PMA3_RS04600 PF01339 CheB methylesterase PMA3_RS04605 PF01590 GAF domain PMA3_RS04605 PF00360 Phytochrome region PMA3_RS04605 PF00563 EAL domain PMA3_RS04605 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS04610 PF00472 RF-1 domain PMA3_RS04610 PF03462 PCRF domain PMA3_RS04615 PF00152 tRNA synthetases class II (D, K and N) PMA3_RS04615 PF01336 OB-fold nucleic acid binding domain PMA3_RS04635 PF12146 Serine aminopeptidase, S33 PMA3_RS04645 PF00691 OmpA family PMA3_RS04645 PF18393 MotY N-terminal domain PMA3_RS04660 PF00311 Phosphoenolpyruvate carboxylase PMA3_RS04665 PF05191 Adenylate kinase, active site lid PMA3_RS04670 PF00814 Glycoprotease family PMA3_RS04680 PF01904 Protein of unknown function DUF72 PMA3_RS04700 PF04445 Putative SAM-dependent methyltransferase PMA3_RS04710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS04715 PF00873 AcrB/AcrD/AcrF family PMA3_RS04730 PF09619 Type III secretion system lipoprotein chaperone (YscW) PMA3_RS04750 PF01553 Acyltransferase PMA3_RS04755 PF00313 'Cold-shock' DNA-binding domain PMA3_RS04765 PF13847 Methyltransferase domain PMA3_RS04770 PF01546 Peptidase family M20/M25/M40 PMA3_RS04770 PF07687 Peptidase dimerisation domain PMA3_RS04775 PF00535 Glycosyl transferase family 2 PMA3_RS04780 PF00899 ThiF family PMA3_RS04785 PF02657 Fe-S metabolism associated domain PMA3_RS04790 PF00266 Aminotransferase class-V PMA3_RS04795 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle PMA3_RS04795 PF14602 Hexapeptide repeat of succinyl-transferase PMA3_RS04800 PF03960 ArsC family PMA3_RS04810 PF00155 Aminotransferase class I and II PMA3_RS04815 PF08335 GlnD PII-uridylyltransferase PMA3_RS04815 PF01966 HD domain PMA3_RS04815 PF01909 Nucleotidyltransferase domain PMA3_RS04815 PF01842 ACT domain PMA3_RS04820 PF00557 Metallopeptidase family M24 PMA3_RS04825 PF00318 Ribosomal protein S2 PMA3_RS04830 PF00889 Elongation factor TS PMA3_RS04835 PF00696 Amino acid kinase family PMA3_RS04840 PF01765 Ribosome recycling factor PMA3_RS04845 PF01255 Putative undecaprenyl diphosphate synthase PMA3_RS04855 PF13288 DXP reductoisomerase C-terminal domain PMA3_RS04855 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PMA3_RS04855 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PMA3_RS04860 PF13180 PDZ domain PMA3_RS04860 PF17820 PDZ domain PMA3_RS04860 PF02163 Peptidase family M50 PMA3_RS04865 PF07244 Surface antigen variable number repeat PMA3_RS04865 PF01103 Surface antigen PMA3_RS04870 PF03938 Outer membrane protein (OmpH-like) PMA3_RS04875 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PMA3_RS04875 PF00132 Bacterial transferase hexapeptide (six repeats) PMA3_RS04880 PF07977 FabA-like domain PMA3_RS04885 PF00132 Bacterial transferase hexapeptide (six repeats) PMA3_RS04885 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PMA3_RS04890 PF02684 Lipid-A-disaccharide synthetase PMA3_RS04895 PF01351 Ribonuclease HII PMA3_RS04900 PF07733 Bacterial DNA polymerase III alpha NTPase domain PMA3_RS04900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PMA3_RS04900 PF14579 Helix-hairpin-helix motif PMA3_RS04900 PF01336 OB-fold nucleic acid binding domain PMA3_RS04900 PF02811 PHP domain PMA3_RS04905 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PMA3_RS04915 PF00117 Glutamine amidotransferase class-I PMA3_RS04915 PF06418 CTP synthase N-terminus PMA3_RS04920 PF00793 DAHP synthetase I family PMA3_RS04925 PF00113 Enolase, C-terminal TIM barrel domain PMA3_RS04925 PF03952 Enolase, N-terminal domain PMA3_RS04930 PF04977 Septum formation initiator PMA3_RS04935 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PMA3_RS04940 PF03466 LysR substrate binding domain PMA3_RS04940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS04945 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS04945 PF00107 Zinc-binding dehydrogenase PMA3_RS04950 PF00756 Putative esterase PMA3_RS04955 PF02542 YgbB family PMA3_RS04960 PF01142 tRNA pseudouridine synthase D (TruD) PMA3_RS04965 PF01975 Survival protein SurE PMA3_RS04975 PF01476 LysM domain PMA3_RS04975 PF01551 Peptidase family M23 PMA3_RS04980 PF00140 Sigma-70 factor, region 1.2 PMA3_RS04980 PF04542 Sigma-70 region 2 PMA3_RS04980 PF04545 Sigma-70, region 4 PMA3_RS04980 PF04539 Sigma-70 region 3 PMA3_RS04985 PF00037 4Fe-4S binding domain PMA3_RS04985 PF11953 Domain of unknown function (DUF3470) PMA3_RS04990 PF01624 MutS domain I PMA3_RS04990 PF05188 MutS domain II PMA3_RS04990 PF05192 MutS domain III PMA3_RS04990 PF00488 MutS domain V PMA3_RS04990 PF05190 MutS family domain IV PMA3_RS04995 PF02464 Competence-damaged protein PMA3_RS05000 PF00154 recA bacterial DNA recombination protein PMA3_RS05005 PF02631 RecX family PMA3_RS05025 PF03942 DTW domain PMA3_RS05030 PF00072 Response regulator receiver domain PMA3_RS05030 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS05035 PF01219 Prokaryotic diacylglycerol kinase PMA3_RS05040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS05040 PF03466 LysR substrate binding domain PMA3_RS05045 PF00970 Oxidoreductase FAD-binding domain PMA3_RS05045 PF00175 Oxidoreductase NAD-binding domain PMA3_RS05050 PF01980 tRNA-methyltransferase O PMA3_RS05050 PF18389 TrmO C-terminal domain PMA3_RS05055 PF07308 Protein of unknown function (DUF1456) PMA3_RS05060 PF00849 RNA pseudouridylate synthase PMA3_RS05060 PF01479 S4 domain PMA3_RS05065 PF13673 Acetyltransferase (GNAT) domain PMA3_RS05070 PF04055 Radical SAM superfamily PMA3_RS05070 PF18693 TRAM domain PMA3_RS05070 PF00919 Uncharacterized protein family UPF0004 PMA3_RS05075 PF02705 K+ potassium transporter PMA3_RS05085 PF03706 Lysylphosphatidylglycerol synthase TM region PMA3_RS05085 PF09924 Uncharacterised conserved protein (DUF2156) PMA3_RS05105 PF00817 impB/mucB/samB family PMA3_RS05105 PF11798 IMS family HHH motif PMA3_RS05115 PF04073 Aminoacyl-tRNA editing domain PMA3_RS05115 PF03129 Anticodon binding domain PMA3_RS05115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PMA3_RS05120 PF07690 Major Facilitator Superfamily PMA3_RS05135 PF00313 'Cold-shock' DNA-binding domain PMA3_RS05140 PF00692 dUTPase PMA3_RS05155 PF00271 Helicase conserved C-terminal domain PMA3_RS05155 PF08494 DEAD/H associated PMA3_RS05155 PF00270 DEAD/DEAH box helicase PMA3_RS05160 PF00005 ABC transporter PMA3_RS05170 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS05175 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS05180 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS05185 PF01068 ATP dependent DNA ligase domain PMA3_RS05185 PF04679 ATP dependent DNA ligase C terminal region PMA3_RS05185 PF04675 DNA ligase N terminus PMA3_RS05195 PF01804 Penicillin amidase PMA3_RS05200 PF07516 SecA Wing and Scaffold domain PMA3_RS05200 PF01043 SecA preprotein cross-linking domain PMA3_RS05200 PF07517 SecA DEAD-like domain PMA3_RS05200 PF02810 SEC-C motif PMA3_RS05210 PF02810 SEC-C motif PMA3_RS05220 PF05736 OprF membrane domain PMA3_RS05220 PF00691 OmpA family PMA3_RS05240 PF06733 DEAD_2 PMA3_RS05240 PF13307 Helicase C-terminal domain PMA3_RS05245 PF17992 Agarase CBM like domain PMA3_RS05245 PF02449 Beta-galactosidase PMA3_RS05250 PF00144 Beta-lactamase PMA3_RS05255 PF00691 OmpA family PMA3_RS05255 PF13488 Glycine zipper PMA3_RS05260 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PMA3_RS05260 PF01243 Pyridoxamine 5'-phosphate oxidase PMA3_RS05275 PF06965 Na+/H+ antiporter 1 PMA3_RS05280 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS05305 PF03466 LysR substrate binding domain PMA3_RS05305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS05310 PF00005 ABC transporter PMA3_RS05315 PF00005 ABC transporter PMA3_RS05315 PF12399 Branched-chain amino acid ATP-binding cassette transporter PMA3_RS05320 PF11862 Domain of unknown function (DUF3382) PMA3_RS05320 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS05325 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS05330 PF13458 Periplasmic binding protein PMA3_RS05340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PMA3_RS05340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PMA3_RS05345 PF07690 Major Facilitator Superfamily PMA3_RS05350 PF01548 Transposase PMA3_RS05350 PF02371 Transposase IS116/IS110/IS902 family PMA3_RS05355 PF00271 Helicase conserved C-terminal domain PMA3_RS05355 PF12137 RNA polymerase recycling family C-terminal PMA3_RS05355 PF00176 SNF2 family N-terminal domain PMA3_RS05355 PF18339 RapA N-terminal Tudor like domain 1 PMA3_RS05355 PF18337 RapA N-terminal Tudor like domain PMA3_RS05370 PF01384 Phosphate transporter family PMA3_RS05380 PF09339 IclR helix-turn-helix domain PMA3_RS05380 PF01614 Bacterial transcriptional regulator PMA3_RS05385 PF07690 Major Facilitator Superfamily PMA3_RS05390 PF01144 Coenzyme A transferase PMA3_RS05395 PF01144 Coenzyme A transferase PMA3_RS05400 PF00108 Thiolase, N-terminal domain PMA3_RS05400 PF02803 Thiolase, C-terminal domain PMA3_RS05405 PF00775 Dioxygenase PMA3_RS05405 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal PMA3_RS05415 PF00083 Sugar (and other) transporter PMA3_RS05420 PF00206 Lyase PMA3_RS05420 PF10397 Adenylosuccinate lyase C-terminus PMA3_RS05425 PF12146 Serine aminopeptidase, S33 PMA3_RS05430 PF02627 Carboxymuconolactone decarboxylase family PMA3_RS05435 PF03573 outer membrane porin, OprD family PMA3_RS05445 PF02321 Outer membrane efflux protein PMA3_RS05450 PF00873 AcrB/AcrD/AcrF family PMA3_RS05455 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS05455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS05460 PF08361 MAATS-type transcriptional repressor, C-terminal region PMA3_RS05460 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS05475 PF03795 YCII-related domain PMA3_RS05480 PF08281 Sigma-70, region 4 PMA3_RS05480 PF04542 Sigma-70 region 2 PMA3_RS05485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS05485 PF03466 LysR substrate binding domain PMA3_RS05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS05495 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS05495 PF00360 Phytochrome region PMA3_RS05495 PF01590 GAF domain PMA3_RS05495 PF08446 PAS fold PMA3_RS05505 PF03009 Glycerophosphoryl diester phosphodiesterase family PMA3_RS05520 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS05525 PF12706 Beta-lactamase superfamily domain PMA3_RS05530 PF01425 Amidase PMA3_RS05540 PF14310 Fibronectin type III-like domain PMA3_RS05540 PF00933 Glycosyl hydrolase family 3 N terminal domain PMA3_RS05540 PF01915 Glycosyl hydrolase family 3 C-terminal domain PMA3_RS05565 PF12102 Domain of unknown function (DUF3578) PMA3_RS05565 PF07728 AAA domain (dynein-related subfamily) PMA3_RS05575 PF00268 Ribonucleotide reductase, small chain PMA3_RS05590 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS05590 PF00501 AMP-binding enzyme PMA3_RS05590 PF16177 Acetyl-coenzyme A synthetase N-terminus PMA3_RS05595 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS05600 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS05605 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS05615 PF00005 ABC transporter PMA3_RS05620 PF12833 Helix-turn-helix domain PMA3_RS05625 PF00202 Aminotransferase class-III PMA3_RS05630 PF04958 Arginine N-succinyltransferase beta subunit PMA3_RS05635 PF04958 Arginine N-succinyltransferase beta subunit PMA3_RS05640 PF00171 Aldehyde dehydrogenase family PMA3_RS05645 PF04996 Succinylarginine dihydrolase PMA3_RS05655 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family PMA3_RS05660 PF00885 6,7-dimethyl-8-ribityllumazine synthase PMA3_RS05665 PF01212 Beta-eliminating lyase PMA3_RS05670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PMA3_RS05670 PF02272 DHHA1 domain PMA3_RS05670 PF01411 tRNA synthetases class II (A) PMA3_RS05675 PF00696 Amino acid kinase family PMA3_RS05675 PF13840 ACT domain PMA3_RS05675 PF01842 ACT domain PMA3_RS05680 PF02599 Global regulator protein family PMA3_RS05700 PF03448 MgtE intracellular N domain PMA3_RS05700 PF01769 Divalent cation transporter PMA3_RS05700 PF00571 CBS domain PMA3_RS05705 PF03869 Arc-like DNA binding domain PMA3_RS05755 PF01739 CheR methyltransferase, SAM binding domain PMA3_RS05755 PF01339 CheB methylesterase PMA3_RS05755 PF03705 CheR methyltransferase, all-alpha domain PMA3_RS05755 PF08448 PAS fold PMA3_RS05760 PF00120 Glutamine synthetase, catalytic domain PMA3_RS05765 PF07690 Major Facilitator Superfamily PMA3_RS05770 PF07238 PilZ domain PMA3_RS05770 PF07317 Flagellar regulator YcgR PMA3_RS05780 PF04316 Anti-sigma-28 factor, FlgM PMA3_RS05790 PF00072 Response regulator receiver domain PMA3_RS05790 PF01584 CheW-like domain PMA3_RS05795 PF03705 CheR methyltransferase, all-alpha domain PMA3_RS05795 PF01739 CheR methyltransferase, SAM binding domain PMA3_RS05800 PF00460 Flagella basal body rod protein PMA3_RS05805 PF00460 Flagella basal body rod protein PMA3_RS05805 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PMA3_RS05810 PF13861 FlgD Tudor-like domain PMA3_RS05810 PF13860 FlgD Ig-like domain PMA3_RS05810 PF03963 Flagellar hook capping protein - N-terminal region PMA3_RS05815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PMA3_RS05815 PF00460 Flagella basal body rod protein PMA3_RS05815 PF07559 Flagellar basal body protein FlaE PMA3_RS05820 PF00317 Ribonucleotide reductase, all-alpha domain PMA3_RS05820 PF03477 ATP cone domain PMA3_RS05820 PF02867 Ribonucleotide reductase, barrel domain PMA3_RS05825 PF00072 Response regulator receiver domain PMA3_RS05825 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS05830 PF00672 HAMP domain PMA3_RS05830 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS05830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS05845 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS05845 PF00072 Response regulator receiver domain PMA3_RS05850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS05855 PF12833 Helix-turn-helix domain PMA3_RS05855 PF02311 AraC-like ligand binding domain PMA3_RS05860 PF00375 Sodium:dicarboxylate symporter family PMA3_RS05865 PF02515 CoA-transferase family III PMA3_RS05870 PF17283 SprT-like zinc ribbon domain PMA3_RS05870 PF10263 SprT-like family PMA3_RS05875 PF04893 Yip1 domain PMA3_RS05880 PF01171 PP-loop family PMA3_RS05885 PF03352 Methyladenine glycosylase PMA3_RS05895 PF03358 NADPH-dependent FMN reductase PMA3_RS05900 PF03960 ArsC family PMA3_RS05905 PF00085 Thioredoxin PMA3_RS05920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PMA3_RS05920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMA3_RS05925 PF00072 Response regulator receiver domain PMA3_RS05925 PF00672 HAMP domain PMA3_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS05925 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS05925 PF01627 Hpt domain PMA3_RS05925 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PMA3_RS05930 PF00072 Response regulator receiver domain PMA3_RS05930 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS05935 PF00672 HAMP domain PMA3_RS05935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS05935 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS05935 PF16750 Sensor domain of 2-component histidine kinase PMA3_RS05945 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS05950 PF05958 tRNA (Uracil-5-)-methyltransferase PMA3_RS05955 PF13291 ACT domain PMA3_RS05955 PF04607 Region found in RelA / SpoT proteins PMA3_RS05955 PF02824 TGS domain PMA3_RS05960 PF03819 MazG nucleotide pyrophosphohydrolase domain PMA3_RS05965 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) PMA3_RS05975 PF00109 Beta-ketoacyl synthase, N-terminal domain PMA3_RS05975 PF02801 Beta-ketoacyl synthase, C-terminal domain PMA3_RS05980 PF07977 FabA-like domain PMA3_RS05985 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS05985 PF00672 HAMP domain PMA3_RS05985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS05985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PMA3_RS05985 PF01627 Hpt domain PMA3_RS05985 PF00072 Response regulator receiver domain PMA3_RS05995 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PMA3_RS05995 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PMA3_RS06010 PF00501 AMP-binding enzyme PMA3_RS06015 PF03061 Thioesterase superfamily PMA3_RS06030 PF02798 Glutathione S-transferase, N-terminal domain PMA3_RS06030 PF00043 Glutathione S-transferase, C-terminal domain PMA3_RS06040 PF01594 AI-2E family transporter PMA3_RS06045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PMA3_RS06050 PF16884 N-terminal domain of oxidoreductase PMA3_RS06050 PF00107 Zinc-binding dehydrogenase PMA3_RS06060 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS06065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS06065 PF16591 Helical bimodular sensor domain PMA3_RS06065 PF00672 HAMP domain PMA3_RS06095 PF01810 LysE type translocator PMA3_RS06105 PF01411 tRNA synthetases class II (A) PMA3_RS06105 PF02272 DHHA1 domain PMA3_RS06105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PMA3_RS06110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS06110 PF03466 LysR substrate binding domain PMA3_RS06120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS06120 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS06120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS06120 PF09317 Domain of unknown function (DUF1974) PMA3_RS06130 PF00043 Glutathione S-transferase, C-terminal domain PMA3_RS06130 PF13417 Glutathione S-transferase, N-terminal domain PMA3_RS06135 PF00005 ABC transporter PMA3_RS06140 PF01061 ABC-2 type transporter PMA3_RS06150 PF00753 Metallo-beta-lactamase superfamily PMA3_RS06150 PF03772 Competence protein PMA3_RS06155 PF01618 MotA/TolQ/ExbB proton channel family PMA3_RS06160 PF02472 Biopolymer transport protein ExbD/TolR PMA3_RS06165 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PMA3_RS06170 PF03966 Trm112p-like protein PMA3_RS06175 PF02348 Cytidylyltransferase PMA3_RS06180 PF01451 Low molecular weight phosphotyrosine protein phosphatase PMA3_RS06185 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PMA3_RS06185 PF01565 FAD binding domain PMA3_RS06190 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS06190 PF01799 [2Fe-2S] binding domain PMA3_RS06195 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PMA3_RS06200 PF02625 XdhC and CoxI family PMA3_RS06200 PF13478 XdhC Rossmann domain PMA3_RS06210 PF12111 Polyribonucleotide phosphorylase C terminal PMA3_RS06210 PF00575 S1 RNA binding domain PMA3_RS06210 PF10150 Ribonuclease E/G family PMA3_RS06215 PF01479 S4 domain PMA3_RS06215 PF00849 RNA pseudouridylate synthase PMA3_RS06220 PF13419 Haloacid dehalogenase-like hydrolase PMA3_RS06225 PF06965 Na+/H+ antiporter 1 PMA3_RS06225 PF01343 Peptidase family S49 PMA3_RS06230 PF02545 Maf-like protein PMA3_RS06235 PF02620 Large ribosomal RNA subunit accumulation protein YceD PMA3_RS06240 PF01783 Ribosomal L32p protein family PMA3_RS06245 PF02504 Fatty acid synthesis protein PMA3_RS06250 PF00698 Acyl transferase domain PMA3_RS06260 PF00550 Phosphopantetheine attachment site PMA3_RS06265 PF02801 Beta-ketoacyl synthase, C-terminal domain PMA3_RS06265 PF00109 Beta-ketoacyl synthase, N-terminal domain PMA3_RS06270 PF01063 Amino-transferase class IV PMA3_RS06275 PF02618 YceG-like family PMA3_RS06280 PF02223 Thymidylate kinase PMA3_RS06345 PF01047 MarR family PMA3_RS06380 PF09278 MerR, DNA binding PMA3_RS06380 PF00376 MerR family regulatory protein PMA3_RS06385 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PMA3_RS06415 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS06415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS06420 PF00873 AcrB/AcrD/AcrF family PMA3_RS06425 PF11604 Copper binding periplasmic protein CusF PMA3_RS06430 PF00376 MerR family regulatory protein PMA3_RS06430 PF09278 MerR, DNA binding PMA3_RS06435 PF02600 Disulfide bond formation protein DsbB PMA3_RS06440 PF13462 Thioredoxin PMA3_RS06440 PF06965 Na+/H+ antiporter 1 PMA3_RS06445 PF00403 Heavy-metal-associated domain PMA3_RS06455 PF01545 Cation efflux family PMA3_RS06460 PF00672 HAMP domain PMA3_RS06460 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS06465 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS06465 PF00072 Response regulator receiver domain PMA3_RS06470 PF02321 Outer membrane efflux protein PMA3_RS06475 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS06475 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS06480 PF00873 AcrB/AcrD/AcrF family PMA3_RS06495 PF03573 outer membrane porin, OprD family PMA3_RS06500 PF03573 outer membrane porin, OprD family PMA3_RS06595 PF00270 DEAD/DEAH box helicase PMA3_RS06595 PF00271 Helicase conserved C-terminal domain PMA3_RS06595 PF09369 Domain of unknown function (DUF1998) PMA3_RS06640 PF02223 Thymidylate kinase PMA3_RS06645 PF09115 DNA polymerase III, delta subunit, C terminal PMA3_RS06655 PF01026 TatD related DNase PMA3_RS06660 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS06665 PF06463 Molybdenum Cofactor Synthesis C PMA3_RS06665 PF04055 Radical SAM superfamily PMA3_RS06680 PF07729 FCD domain PMA3_RS06680 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS06685 PF08450 SMP-30/Gluconolactonase/LRE-like region PMA3_RS06695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PMA3_RS06700 PF00005 ABC transporter PMA3_RS06705 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS06710 PF07702 UTRA domain PMA3_RS06710 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS06715 PF03747 ADP-ribosylglycohydrolase PMA3_RS06725 PF00294 pfkB family carbohydrate kinase PMA3_RS06745 PF05035 2-keto-3-deoxy-galactonokinase PMA3_RS06750 PF01081 KDPG and KHG aldolase PMA3_RS06755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PMA3_RS06755 PF13378 Enolase C-terminal domain-like PMA3_RS06760 PF07690 Major Facilitator Superfamily PMA3_RS06765 PF01614 Bacterial transcriptional regulator PMA3_RS06765 PF09339 IclR helix-turn-helix domain PMA3_RS06770 PF00107 Zinc-binding dehydrogenase PMA3_RS06770 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS06775 PF06719 AraC-type transcriptional regulator N-terminus PMA3_RS06775 PF12833 Helix-turn-helix domain PMA3_RS06785 PF01012 Electron transfer flavoprotein domain PMA3_RS06790 PF01012 Electron transfer flavoprotein domain PMA3_RS06790 PF00766 Electron transfer flavoprotein FAD-binding domain PMA3_RS06805 PF13488 Glycine zipper PMA3_RS06805 PF00691 OmpA family PMA3_RS06810 PF00155 Aminotransferase class I and II PMA3_RS06810 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS06820 PF03692 Putative zinc- or iron-chelating domain PMA3_RS06825 PF01852 START domain PMA3_RS06830 PF00884 Sulfatase PMA3_RS06840 PF00561 alpha/beta hydrolase fold PMA3_RS06840 PF00106 short chain dehydrogenase PMA3_RS06845 PF02694 Uncharacterised BCR, YnfA/UPF0060 family PMA3_RS06850 PF02599 Global regulator protein family PMA3_RS06855 PF06794 Uncharacterised protein family (UPF0270) PMA3_RS06865 PF08443 RimK-like ATP-grasp domain PMA3_RS06865 PF02875 Mur ligase family, glutamate ligase domain PMA3_RS06865 PF08245 Mur ligase middle domain PMA3_RS06870 PF13537 Glutamine amidotransferase domain PMA3_RS06870 PF00733 Asparagine synthase PMA3_RS06875 PF01266 FAD dependent oxidoreductase PMA3_RS06875 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PMA3_RS06880 PF03976 Polyphosphate kinase 2 (PPK2) PMA3_RS06885 PF02803 Thiolase, C-terminal domain PMA3_RS06885 PF00108 Thiolase, N-terminal domain PMA3_RS06895 PF00892 EamA-like transporter family PMA3_RS06900 PF10415 Fumarase C C-terminus PMA3_RS06900 PF00206 Lyase PMA3_RS06910 PF01722 BolA-like protein PMA3_RS06920 PF17773 UPF0176 acylphosphatase like domain PMA3_RS06920 PF00581 Rhodanese-like domain PMA3_RS06930 PF00664 ABC transporter transmembrane region PMA3_RS06930 PF00005 ABC transporter PMA3_RS06940 PF00563 EAL domain PMA3_RS06940 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS06940 PF08448 PAS fold PMA3_RS06950 PF00893 Small Multidrug Resistance protein PMA3_RS06955 PF01758 Sodium Bile acid symporter family PMA3_RS06960 PF04381 Putative exonuclease, RdgC PMA3_RS06985 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PMA3_RS06985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PMA3_RS07015 PF00595 PDZ domain PMA3_RS07015 PF17804 Tail specific protease N-terminal domain PMA3_RS07015 PF11818 C-terminal domain of tail specific protease (DUF3340) PMA3_RS07015 PF03572 Peptidase family S41 PMA3_RS07020 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS07020 PF00698 Acyl transferase domain PMA3_RS07020 PF00550 Phosphopantetheine attachment site PMA3_RS07020 PF14765 Polyketide synthase dehydratase PMA3_RS07020 PF08659 KR domain PMA3_RS07030 PF00005 ABC transporter PMA3_RS07030 PF08402 TOBE domain PMA3_RS07055 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS07055 PF07702 UTRA domain PMA3_RS07060 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PMA3_RS07065 PF05724 Thiopurine S-methyltransferase (TPMT) PMA3_RS07070 PF01435 Peptidase family M48 PMA3_RS07075 PF00155 Aminotransferase class I and II PMA3_RS07080 PF01641 SelR domain PMA3_RS07085 PF00255 Glutathione peroxidase PMA3_RS07090 PF01047 MarR family PMA3_RS07095 PF00072 Response regulator receiver domain PMA3_RS07095 PF00672 HAMP domain PMA3_RS07095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PMA3_RS07095 PF01627 Hpt domain PMA3_RS07095 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS07105 PF13185 GAF domain PMA3_RS07110 PF01627 Hpt domain PMA3_RS07110 PF00989 PAS fold PMA3_RS07110 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS07110 PF00072 Response regulator receiver domain PMA3_RS07110 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS07110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS07115 PF00072 Response regulator receiver domain PMA3_RS07115 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS07125 PF01966 HD domain PMA3_RS07145 PF00909 Ammonium Transporter Family PMA3_RS07150 PF02254 TrkA-N domain PMA3_RS07150 PF02080 TrkA-C domain PMA3_RS07150 PF00999 Sodium/hydrogen exchanger family PMA3_RS07165 PF00849 RNA pseudouridylate synthase PMA3_RS07175 PF12804 MobA-like NTP transferase domain PMA3_RS07180 PF00994 Probable molybdopterin binding domain PMA3_RS07185 PF00994 Probable molybdopterin binding domain PMA3_RS07185 PF03454 MoeA C-terminal region (domain IV) PMA3_RS07185 PF03453 MoeA N-terminal region (domain I and II) PMA3_RS07195 PF00781 Diacylglycerol kinase catalytic domain PMA3_RS07205 PF03476 MOSC N-terminal beta barrel domain PMA3_RS07205 PF03473 MOSC domain PMA3_RS07205 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS07210 PF06865 Pyrimidine/purine nucleoside phosphorylase PMA3_RS07220 PF00364 Biotin-requiring enzyme PMA3_RS07220 PF02785 Biotin carboxylase C-terminal domain PMA3_RS07220 PF00289 Biotin carboxylase, N-terminal domain PMA3_RS07220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PMA3_RS07225 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS07230 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS07230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS07230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS07235 PF01039 Carboxyl transferase domain PMA3_RS07245 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS07245 PF17932 Tetracyclin repressor-like, C-terminal domain PMA3_RS07265 PF00550 Phosphopantetheine attachment site PMA3_RS07265 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS07265 PF00668 Condensation domain PMA3_RS07265 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS07265 PF00501 AMP-binding enzyme PMA3_RS07265 PF00550 Phosphopantetheine attachment site PMA3_RS07265 PF00668 Condensation domain PMA3_RS07265 PF00501 AMP-binding enzyme PMA3_RS07270 PF00561 alpha/beta hydrolase fold PMA3_RS07275 PF13098 Thioredoxin-like domain PMA3_RS07280 PF00578 AhpC/TSA family PMA3_RS07285 PF11412 Disulphide bond corrector protein DsbC PMA3_RS07285 PF02683 Cytochrome C biogenesis protein transmembrane region PMA3_RS07295 PF00072 Response regulator receiver domain PMA3_RS07295 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS07300 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS07300 PF08521 Two-component sensor kinase N-terminal PMA3_RS07310 PF00202 Aminotransferase class-III PMA3_RS07315 PF03621 MbtH-like protein PMA3_RS07325 PF00950 ABC 3 transport family PMA3_RS07330 PF00005 ABC transporter PMA3_RS07375 PF01810 LysE type translocator PMA3_RS07380 PF00266 Aminotransferase class-V PMA3_RS07385 PF01321 Creatinase/Prolidase N-terminal domain PMA3_RS07385 PF00557 Metallopeptidase family M24 PMA3_RS07390 PF03466 LysR substrate binding domain PMA3_RS07390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS07395 PF02801 Beta-ketoacyl synthase, C-terminal domain PMA3_RS07395 PF00107 Zinc-binding dehydrogenase PMA3_RS07395 PF08659 KR domain PMA3_RS07395 PF00550 Phosphopantetheine attachment site PMA3_RS07395 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS07395 PF14765 Polyketide synthase dehydratase PMA3_RS07395 PF00109 Beta-ketoacyl synthase, N-terminal domain PMA3_RS07395 PF16197 Ketoacyl-synthetase C-terminal extension PMA3_RS07395 PF00698 Acyl transferase domain PMA3_RS07400 PF01323 DSBA-like thioredoxin domain PMA3_RS07410 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS07420 PF00892 EamA-like transporter family PMA3_RS07450 PF00905 Penicillin binding protein transpeptidase domain PMA3_RS07450 PF03717 Penicillin-binding Protein dimerisation domain PMA3_RS07455 PF00158 Sigma-54 interaction domain PMA3_RS07455 PF02954 Bacterial regulatory protein, Fis family PMA3_RS07455 PF13426 PAS domain PMA3_RS07460 PF00664 ABC transporter transmembrane region PMA3_RS07460 PF00005 ABC transporter PMA3_RS07465 PF00082 Subtilase family PMA3_RS07465 PF05922 Peptidase inhibitor I9 PMA3_RS07475 PF00107 Zinc-binding dehydrogenase PMA3_RS07475 PF16884 N-terminal domain of oxidoreductase PMA3_RS07480 PF02132 RecR protein PMA3_RS07480 PF13662 Toprim domain PMA3_RS07485 PF00156 Phosphoribosyl transferase domain PMA3_RS07490 PF00027 Cyclic nucleotide-binding domain PMA3_RS07490 PF13545 Crp-like helix-turn-helix domain PMA3_RS07495 PF06969 HemN C-terminal domain PMA3_RS07495 PF04055 Radical SAM superfamily PMA3_RS07510 PF00403 Heavy-metal-associated domain PMA3_RS07520 PF12801 4Fe-4S binding domain PMA3_RS07520 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PMA3_RS07520 PF13746 4Fe-4S dicluster domain PMA3_RS07530 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PMA3_RS07530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PMA3_RS07545 PF00115 Cytochrome C and Quinol oxidase polypeptide I PMA3_RS07550 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PMA3_RS07550 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PMA3_RS07565 PF00115 Cytochrome C and Quinol oxidase polypeptide I PMA3_RS07575 PF03466 LysR substrate binding domain PMA3_RS07575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS07580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS07580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS07580 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS07585 PF01026 TatD related DNase PMA3_RS07590 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS07590 PF01464 Transglycosylase SLT domain PMA3_RS07595 PF07681 DoxX PMA3_RS07605 PF01272 Transcription elongation factor, GreA/GreB, C-term PMA3_RS07605 PF03449 Transcription elongation factor, N-terminal PMA3_RS07615 PF00005 ABC transporter PMA3_RS07620 PF13472 GDSL-like Lipase/Acylhydrolase family PMA3_RS07630 PF03734 L,D-transpeptidase catalytic domain PMA3_RS07630 PF17969 L,D-transpeptidase C-terminal domain PMA3_RS07635 PF11839 Alanine-zipper, major outer membrane lipoprotein PMA3_RS07645 PF00793 DAHP synthetase I family PMA3_RS07665 PF00582 Universal stress protein family PMA3_RS07670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS07670 PF03466 LysR substrate binding domain PMA3_RS07675 PF01272 Transcription elongation factor, GreA/GreB, C-term PMA3_RS07675 PF03449 Transcription elongation factor, N-terminal PMA3_RS07690 PF09285 Elongation factor P, C-terminal PMA3_RS07690 PF08207 Elongation factor P (EF-P) KOW-like domain PMA3_RS07690 PF01132 Elongation factor P (EF-P) OB domain PMA3_RS07700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS07700 PF03466 LysR substrate binding domain PMA3_RS07715 PF06224 Winged helix DNA-binding domain PMA3_RS07720 PF01474 Class-II DAHP synthetase family PMA3_RS07730 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS07735 PF00270 DEAD/DEAH box helicase PMA3_RS07735 PF03880 DbpA RNA binding domain PMA3_RS07735 PF00271 Helicase conserved C-terminal domain PMA3_RS07740 PF01546 Peptidase family M20/M25/M40 PMA3_RS07740 PF07687 Peptidase dimerisation domain PMA3_RS07745 PF00924 Mechanosensitive ion channel PMA3_RS07750 PF02127 Aminopeptidase I zinc metalloprotease (M18) PMA3_RS07760 PF00849 RNA pseudouridylate synthase PMA3_RS07765 PF03776 Septum formation topological specificity factor MinE PMA3_RS07770 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PMA3_RS07775 PF03775 Septum formation inhibitor MinC, C-terminal domain PMA3_RS07775 PF05209 Septum formation inhibitor MinC, N-terminal domain PMA3_RS07780 PF03279 Bacterial lipid A biosynthesis acyltransferase PMA3_RS07800 PF00860 Permease family PMA3_RS07810 PF04115 Ureidoglycolate lyase PMA3_RS07815 PF03561 Allantoicase repeat PMA3_RS07820 PF09349 OHCU decarboxylase PMA3_RS07820 PF01014 Uricase PMA3_RS07830 PF00576 HIUase/Transthyretin family PMA3_RS07845 PF00860 Permease family PMA3_RS07855 PF01227 GTP cyclohydrolase I PMA3_RS07860 PF01713 Smr domain PMA3_RS07875 PF05175 Methyltransferase small domain PMA3_RS07885 PF12146 Serine aminopeptidase, S33 PMA3_RS07885 PF13026 Protein of unknown function (DUF3887) PMA3_RS07890 PF01264 Chorismate synthase PMA3_RS07895 PF12832 MFS_1 like family PMA3_RS07900 PF03079 ARD/ARD' family PMA3_RS07910 PF00501 AMP-binding enzyme PMA3_RS07910 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS07915 PF00023 Ankyrin repeat PMA3_RS07915 PF12796 Ankyrin repeats (3 copies) PMA3_RS07920 PF00691 OmpA family PMA3_RS07925 PF03104 DNA polymerase family B, exonuclease domain PMA3_RS07925 PF00136 DNA polymerase family B PMA3_RS07935 PF00248 Aldo/keto reductase family PMA3_RS07945 PF01925 Sulfite exporter TauE/SafE PMA3_RS07985 PF07969 Amidohydrolase family PMA3_RS07990 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS07995 PF00144 Beta-lactamase PMA3_RS08015 PF06715 Gp5 C-terminal repeat (3 copies) PMA3_RS08015 PF04717 Type VI secretion system, phage-baseplate injector PMA3_RS08025 PF00892 EamA-like transporter family PMA3_RS08030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS08030 PF03466 LysR substrate binding domain PMA3_RS08035 PF01136 Peptidase family U32 PMA3_RS08035 PF16325 Peptidase family U32 C-terminal domain PMA3_RS08040 PF01594 AI-2E family transporter PMA3_RS08060 PF08501 Shikimate dehydrogenase substrate binding domain PMA3_RS08065 PF04337 Protein of unknown function, DUF480 PMA3_RS08075 PF00375 Sodium:dicarboxylate symporter family PMA3_RS08080 PF07690 Major Facilitator Superfamily PMA3_RS08085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS08085 PF03466 LysR substrate binding domain PMA3_RS08095 PF03471 Transporter associated domain PMA3_RS08095 PF03741 Integral membrane protein TerC family PMA3_RS08115 PF00768 D-alanyl-D-alanine carboxypeptidase PMA3_RS08120 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PMA3_RS08120 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PMA3_RS08140 PF05697 Bacterial trigger factor protein (TF) PMA3_RS08140 PF05698 Bacterial trigger factor protein (TF) C-terminus PMA3_RS08140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PMA3_RS08145 PF00574 Clp protease PMA3_RS08150 PF06689 ClpX C4-type zinc finger PMA3_RS08150 PF10431 C-terminal, D2-small domain, of ClpB protein PMA3_RS08150 PF07724 AAA domain (Cdc48 subfamily) PMA3_RS08155 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS08155 PF05362 Lon protease (S16) C-terminal proteolytic domain PMA3_RS08155 PF02190 ATP-dependent protease La (LON) substrate-binding domain PMA3_RS08160 PF00216 Bacterial DNA-binding protein PMA3_RS08165 PF13145 PPIC-type PPIASE domain PMA3_RS08175 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PMA3_RS08175 PF12833 Helix-turn-helix domain PMA3_RS08185 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS08185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS08195 PF13419 Haloacid dehalogenase-like hydrolase PMA3_RS08200 PF00266 Aminotransferase class-V PMA3_RS08205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS08205 PF03466 LysR substrate binding domain PMA3_RS08210 PF03466 LysR substrate binding domain PMA3_RS08210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS08215 PF07690 Major Facilitator Superfamily PMA3_RS08220 PF04717 Type VI secretion system, phage-baseplate injector PMA3_RS08225 PF01709 Transcriptional regulator PMA3_RS08235 PF02371 Transposase IS116/IS110/IS902 family PMA3_RS08235 PF01548 Transposase PMA3_RS08240 PF03969 AFG1-like ATPase PMA3_RS08255 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS08255 PF04324 BFD-like [2Fe-2S] binding domain PMA3_RS08265 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS08270 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS08275 PF08402 TOBE domain PMA3_RS08275 PF00005 ABC transporter PMA3_RS08280 PF01614 Bacterial transcriptional regulator PMA3_RS08280 PF09339 IclR helix-turn-helix domain PMA3_RS08290 PF08281 Sigma-70, region 4 PMA3_RS08290 PF04542 Sigma-70 region 2 PMA3_RS08300 PF01292 Prokaryotic cytochrome b561 PMA3_RS08305 PF00246 Zinc carboxypeptidase PMA3_RS08305 PF18027 Cytosolic carboxypeptidase N-terminal domain PMA3_RS08315 PF00717 Peptidase S24-like PMA3_RS08320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PMA3_RS08320 PF02785 Biotin carboxylase C-terminal domain PMA3_RS08320 PF00289 Biotin carboxylase, N-terminal domain PMA3_RS08320 PF00364 Biotin-requiring enzyme PMA3_RS08330 PF01039 Carboxyl transferase domain PMA3_RS08335 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS08335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS08335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS08340 PF00501 AMP-binding enzyme PMA3_RS08340 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS08350 PF00682 HMGL-like PMA3_RS08355 PF13411 MerR HTH family regulatory protein PMA3_RS08360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS08360 PF08447 PAS fold PMA3_RS08365 PF13296 Putative type VI secretion system Rhs element Vgr PMA3_RS08365 PF04717 Type VI secretion system, phage-baseplate injector PMA3_RS08365 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PMA3_RS08400 PF04717 Type VI secretion system, phage-baseplate injector PMA3_RS08430 PF00483 Nucleotidyl transferase PMA3_RS08440 PF06082 Exopolysaccharide biosynthesis protein YbjH PMA3_RS08455 PF02563 Polysaccharide biosynthesis/export protein PMA3_RS08455 PF18412 Outer-membrane lipoprotein Wza C-terminal domain PMA3_RS08455 PF10531 SLBB domain PMA3_RS08465 PF00534 Glycosyl transferases group 1 PMA3_RS08465 PF13439 Glycosyltransferase Family 4 PMA3_RS08475 PF03102 NeuB family PMA3_RS08475 PF08666 SAF domain PMA3_RS08480 PF03033 Glycosyltransferase family 28 N-terminal domain PMA3_RS08480 PF04101 Glycosyltransferase family 28 C-terminal domain PMA3_RS08485 PF02348 Cytidylyltransferase PMA3_RS08490 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PMA3_RS08495 PF02719 Polysaccharide biosynthesis protein PMA3_RS08515 PF13807 G-rich domain on putative tyrosine kinase PMA3_RS08515 PF02706 Chain length determinant protein PMA3_RS08515 PF13614 AAA domain PMA3_RS08520 PF01451 Low molecular weight phosphotyrosine protein phosphatase PMA3_RS08550 PF00330 Aconitase family (aconitate hydratase) PMA3_RS08550 PF00694 Aconitase C-terminal domain PMA3_RS08555 PF18125 RlmM ferredoxin-like domain PMA3_RS08555 PF01728 FtsJ-like methyltransferase PMA3_RS08560 PF01206 Sulfurtransferase TusA PMA3_RS08565 PF01554 MatE PMA3_RS08570 PF11890 Domain of unknown function (DUF3410) PMA3_RS08570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMA3_RS08570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PMA3_RS08580 PF00005 ABC transporter PMA3_RS08580 PF00664 ABC transporter transmembrane region PMA3_RS08585 PF14718 Soluble lytic murein transglycosylase L domain PMA3_RS08585 PF01464 Transglycosylase SLT domain PMA3_RS08590 PF12848 ABC transporter PMA3_RS08590 PF00005 ABC transporter PMA3_RS08590 PF16326 ABC transporter C-terminal domain PMA3_RS08595 PF00582 Universal stress protein family PMA3_RS08605 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PMA3_RS08605 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PMA3_RS08605 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS08610 PF02803 Thiolase, C-terminal domain PMA3_RS08610 PF00108 Thiolase, N-terminal domain PMA3_RS08620 PF01751 Toprim domain PMA3_RS08620 PF01131 DNA topoisomerase PMA3_RS08620 PF01396 Topoisomerase DNA binding C4 zinc finger PMA3_RS08620 PF08272 Topoisomerase I zinc-ribbon-like PMA3_RS08635 PF03846 Cell division inhibitor SulA PMA3_RS08640 PF00717 Peptidase S24-like PMA3_RS08640 PF01726 LexA DNA binding domain PMA3_RS08645 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS08650 PF00933 Glycosyl hydrolase family 3 N terminal domain PMA3_RS08655 PF01048 Phosphorylase superfamily PMA3_RS08660 PF00271 Helicase conserved C-terminal domain PMA3_RS08660 PF12419 SNF2 Helicase protein PMA3_RS08660 PF00176 SNF2 family N-terminal domain PMA3_RS08670 PF17757 UvrB interaction domain PMA3_RS08670 PF02559 CarD-like/TRCF domain PMA3_RS08670 PF03461 TRCF domain PMA3_RS08670 PF00270 DEAD/DEAH box helicase PMA3_RS08670 PF00271 Helicase conserved C-terminal domain PMA3_RS08675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PMA3_RS08675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PMA3_RS08680 PF02424 ApbE family PMA3_RS08685 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS08685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PMA3_RS08690 PF03009 Glycerophosphoryl diester phosphodiesterase family PMA3_RS08700 PF12704 MacB-like periplasmic core domain PMA3_RS08700 PF02687 FtsX-like permease family PMA3_RS08705 PF00005 ABC transporter PMA3_RS08710 PF12704 MacB-like periplasmic core domain PMA3_RS08710 PF02687 FtsX-like permease family PMA3_RS08715 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS08715 PF00672 HAMP domain PMA3_RS08715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS08720 PF00072 Response regulator receiver domain PMA3_RS08720 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS08730 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PMA3_RS08730 PF14489 QueF-like protein PMA3_RS08745 PF04333 MlaA lipoprotein PMA3_RS08750 PF00072 Response regulator receiver domain PMA3_RS08750 PF00158 Sigma-54 interaction domain PMA3_RS08750 PF02954 Bacterial regulatory protein, Fis family PMA3_RS08760 PF00923 Transaldolase/Fructose-6-phosphate aldolase PMA3_RS08765 PF01207 Dihydrouridine synthase (Dus) PMA3_RS08790 PF02780 Transketolase, C-terminal domain PMA3_RS08790 PF02779 Transketolase, pyrimidine binding domain PMA3_RS08795 PF00456 Transketolase, thiamine diphosphate binding domain PMA3_RS08800 PF07690 Major Facilitator Superfamily PMA3_RS08810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS08810 PF03466 LysR substrate binding domain PMA3_RS08820 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS08830 PF03734 L,D-transpeptidase catalytic domain PMA3_RS08850 PF00596 Class II Aldolase and Adducin N-terminal domain PMA3_RS08860 PF03372 Endonuclease/Exonuclease/phosphatase family PMA3_RS08870 PF00860 Permease family PMA3_RS08885 PF00873 AcrB/AcrD/AcrF family PMA3_RS08905 PF00155 Aminotransferase class I and II PMA3_RS08910 PF04851 Type III restriction enzyme, res subunit PMA3_RS08910 PF17757 UvrB interaction domain PMA3_RS08910 PF00271 Helicase conserved C-terminal domain PMA3_RS08910 PF02151 UvrB/uvrC motif PMA3_RS08910 PF12344 Ultra-violet resistance protein B PMA3_RS08915 PF00749 tRNA synthetases class I (E and Q), catalytic domain PMA3_RS08945 PF00561 alpha/beta hydrolase fold PMA3_RS08955 PF01207 Dihydrouridine synthase (Dus) PMA3_RS08960 PF00011 Hsp20/alpha crystallin family PMA3_RS08980 PF00782 Dual specificity phosphatase, catalytic domain PMA3_RS08985 PF12147 Putative methyltransferase PMA3_RS08985 PF12146 Serine aminopeptidase, S33 PMA3_RS08990 PF01066 CDP-alcohol phosphatidyltransferase PMA3_RS09005 PF00563 EAL domain PMA3_RS09005 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS09005 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS09015 PF00330 Aconitase family (aconitate hydratase) PMA3_RS09020 PF00694 Aconitase C-terminal domain PMA3_RS09025 PF08241 Methyltransferase domain PMA3_RS09030 PF00180 Isocitrate/isopropylmalate dehydrogenase PMA3_RS09035 PF02774 Semialdehyde dehydrogenase, dimerisation domain PMA3_RS09035 PF01118 Semialdehyde dehydrogenase, NAD binding domain PMA3_RS09040 PF01118 Semialdehyde dehydrogenase, NAD binding domain PMA3_RS09040 PF02774 Semialdehyde dehydrogenase, dimerisation domain PMA3_RS09050 PF01416 tRNA pseudouridine synthase PMA3_RS09055 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PMA3_RS09060 PF01039 Carboxyl transferase domain PMA3_RS09060 PF17848 Acetyl-coA carboxylase zinc finger domain PMA3_RS09065 PF08245 Mur ligase middle domain PMA3_RS09065 PF02875 Mur ligase family, glutamate ligase domain PMA3_RS09070 PF05036 Sporulation related domain PMA3_RS09075 PF02674 Colicin V production protein PMA3_RS09080 PF00156 Phosphoribosyl transferase domain PMA3_RS09085 PF01053 Cys/Met metabolism PLP-dependent enzyme PMA3_RS09115 PF04773 FecR protein PMA3_RS09115 PF16220 Domain of unknown function (DUF4880) PMA3_RS09120 PF00593 TonB dependent receptor PMA3_RS09120 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS09125 PF00202 Aminotransferase class-III PMA3_RS09130 PF06276 Ferric iron reductase FhuF-like transporter PMA3_RS09130 PF04183 IucA / IucC family PMA3_RS09135 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PMA3_RS09135 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PMA3_RS09140 PF07690 Major Facilitator Superfamily PMA3_RS09145 PF04183 IucA / IucC family PMA3_RS09145 PF06276 Ferric iron reductase FhuF-like transporter PMA3_RS09150 PF03328 HpcH/HpaI aldolase/citrate lyase family PMA3_RS09155 PF04183 IucA / IucC family PMA3_RS09155 PF06276 Ferric iron reductase FhuF-like transporter PMA3_RS09160 PF01497 Periplasmic binding protein PMA3_RS09165 PF01032 FecCD transport family PMA3_RS09170 PF01032 FecCD transport family PMA3_RS09175 PF00005 ABC transporter PMA3_RS09185 PF03737 Aldolase/RraA PMA3_RS09190 PF01266 FAD dependent oxidoreductase PMA3_RS09260 PF00484 Carbonic anhydrase PMA3_RS09270 PF02599 Global regulator protein family PMA3_RS09280 PF04231 Endonuclease I PMA3_RS09290 PF17763 Glutaminase/Asparaginase C-terminal domain PMA3_RS09290 PF00710 Asparaginase, N-terminal PMA3_RS09295 PF13407 Periplasmic binding protein domain PMA3_RS09300 PF00005 ABC transporter PMA3_RS09305 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS09310 PF00356 Bacterial regulatory proteins, lacI family PMA3_RS09315 PF00294 pfkB family carbohydrate kinase PMA3_RS09320 PF05025 RbsD / FucU transport protein family PMA3_RS09325 PF01156 Inosine-uridine preferring nucleoside hydrolase PMA3_RS09345 PF00313 'Cold-shock' DNA-binding domain PMA3_RS09355 PF03129 Anticodon binding domain PMA3_RS09355 PF02824 TGS domain PMA3_RS09355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PMA3_RS09355 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PMA3_RS09360 PF05198 Translation initiation factor IF-3, N-terminal domain PMA3_RS09360 PF00707 Translation initiation factor IF-3, C-terminal domain PMA3_RS09365 PF01632 Ribosomal protein L35 PMA3_RS09370 PF00453 Ribosomal protein L20 PMA3_RS09375 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PMA3_RS09375 PF01409 tRNA synthetases class II core domain (F) PMA3_RS09380 PF01588 Putative tRNA binding domain PMA3_RS09380 PF03483 B3/4 domain PMA3_RS09380 PF03484 tRNA synthetase B5 domain PMA3_RS09380 PF03147 Ferredoxin-fold anticodon binding domain PMA3_RS09380 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PMA3_RS09385 PF00216 Bacterial DNA-binding protein PMA3_RS09425 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS09435 PF01022 Bacterial regulatory protein, arsR family PMA3_RS09445 PF01758 Sodium Bile acid symporter family PMA3_RS09450 PF03358 NADPH-dependent FMN reductase PMA3_RS09460 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PMA3_RS09460 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PMA3_RS09475 PF02423 Ornithine cyclodeaminase/mu-crystallin family PMA3_RS09480 PF00005 ABC transporter PMA3_RS09485 PF01266 FAD dependent oxidoreductase PMA3_RS09490 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS09495 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS09500 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS09515 PF00180 Isocitrate/isopropylmalate dehydrogenase PMA3_RS09525 PF00390 Malic enzyme, N-terminal domain PMA3_RS09525 PF03949 Malic enzyme, NAD binding domain PMA3_RS09540 PF00916 Sulfate permease family PMA3_RS09540 PF01740 STAS domain PMA3_RS09560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PMA3_RS09565 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS09570 PF12911 N-terminal TM domain of oligopeptide transport permease C PMA3_RS09570 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS09575 PF00005 ABC transporter PMA3_RS09575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PMA3_RS09580 PF00005 ABC transporter PMA3_RS09580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PMA3_RS09595 PF00202 Aminotransferase class-III PMA3_RS09615 PF00701 Dihydrodipicolinate synthetase family PMA3_RS09630 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS09630 PF14821 Threonine synthase N terminus PMA3_RS09635 PF01037 Lrp/AsnC ligand binding domain PMA3_RS09640 PF00742 Homoserine dehydrogenase PMA3_RS09640 PF03447 Homoserine dehydrogenase, NAD binding domain PMA3_RS09640 PF01842 ACT domain PMA3_RS09645 PF00171 Aldehyde dehydrogenase family PMA3_RS09650 PF00324 Amino acid permease PMA3_RS09655 PF01053 Cys/Met metabolism PLP-dependent enzyme PMA3_RS09660 PF00893 Small Multidrug Resistance protein PMA3_RS09665 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS09670 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS09675 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS09680 PF00005 ABC transporter PMA3_RS09685 PF01037 Lrp/AsnC ligand binding domain PMA3_RS09690 PF02743 Cache domain PMA3_RS09690 PF00672 HAMP domain PMA3_RS09690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS09695 PF01546 Peptidase family M20/M25/M40 PMA3_RS09695 PF07687 Peptidase dimerisation domain PMA3_RS09710 PF00842 Alanine racemase, C-terminal domain PMA3_RS09710 PF01168 Alanine racemase, N-terminal domain PMA3_RS09715 PF00158 Sigma-54 interaction domain PMA3_RS09720 PF00465 Iron-containing alcohol dehydrogenase PMA3_RS09735 PF01544 CorA-like Mg2+ transporter protein PMA3_RS09750 PF13276 HTH-like domain PMA3_RS09750 PF00665 Integrase core domain PMA3_RS09755 PF01527 Transposase PMA3_RS09765 PF02586 SOS response associated peptidase (SRAP) PMA3_RS09775 PF00563 EAL domain PMA3_RS09775 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS09775 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS09780 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PMA3_RS09780 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PMA3_RS09785 PF00941 FAD binding domain in molybdopterin dehydrogenase PMA3_RS09785 PF03450 CO dehydrogenase flavoprotein C-terminal domain PMA3_RS09790 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS09790 PF01799 [2Fe-2S] binding domain PMA3_RS09795 PF00501 AMP-binding enzyme PMA3_RS09795 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS09800 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS09800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PMA3_RS09800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PMA3_RS09805 PF00474 Sodium:solute symporter family PMA3_RS09810 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PMA3_RS09815 PF07690 Major Facilitator Superfamily PMA3_RS09825 PF00171 Aldehyde dehydrogenase family PMA3_RS09830 PF03466 LysR substrate binding domain PMA3_RS09830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS09835 PF02441 Flavoprotein PMA3_RS09845 PF02625 XdhC and CoxI family PMA3_RS09845 PF13478 XdhC Rossmann domain PMA3_RS09855 PF03573 outer membrane porin, OprD family PMA3_RS09860 PF02586 SOS response associated peptidase (SRAP) PMA3_RS09865 PF00775 Dioxygenase PMA3_RS09870 PF00775 Dioxygenase PMA3_RS09870 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal PMA3_RS09875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS09875 PF03466 LysR substrate binding domain PMA3_RS09880 PF00005 ABC transporter PMA3_RS09880 PF00664 ABC transporter transmembrane region PMA3_RS09885 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS09890 PF02321 Outer membrane efflux protein PMA3_RS09900 PF06594 Haemolysin-type calcium binding protein related domain PMA3_RS09900 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PMA3_RS09915 PF04143 Sulphur transport PMA3_RS09935 PF00582 Universal stress protein family PMA3_RS09955 PF00582 Universal stress protein family PMA3_RS09965 PF05425 Copper resistance protein D PMA3_RS09970 PF04234 CopC domain PMA3_RS09975 PF05275 Copper resistance protein B precursor (CopB) PMA3_RS09980 PF00394 Multicopper oxidase PMA3_RS09980 PF07731 Multicopper oxidase PMA3_RS09980 PF07732 Multicopper oxidase PMA3_RS10000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PMA3_RS10000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMA3_RS10005 PF01266 FAD dependent oxidoreductase PMA3_RS10010 PF01042 Endoribonuclease L-PSP PMA3_RS10020 PF00005 ABC transporter PMA3_RS10020 PF00571 CBS domain PMA3_RS10025 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS10030 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PMA3_RS10035 PF00557 Metallopeptidase family M24 PMA3_RS10040 PF00175 Oxidoreductase NAD-binding domain PMA3_RS10040 PF00970 Oxidoreductase FAD-binding domain PMA3_RS10040 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS10045 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PMA3_RS10045 PF00355 Rieske [2Fe-2S] domain PMA3_RS10050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS10050 PF03466 LysR substrate binding domain PMA3_RS10055 PF00171 Aldehyde dehydrogenase family PMA3_RS10060 PF07883 Cupin domain PMA3_RS10060 PF12833 Helix-turn-helix domain PMA3_RS10070 PF01266 FAD dependent oxidoreductase PMA3_RS10100 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS10100 PF07729 FCD domain PMA3_RS10110 PF05853 beta-keto acid cleavage enzyme PMA3_RS10115 PF07690 Major Facilitator Superfamily PMA3_RS10120 PF00375 Sodium:dicarboxylate symporter family PMA3_RS10125 PF10397 Adenylosuccinate lyase C-terminus PMA3_RS10125 PF00206 Lyase PMA3_RS10130 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS10130 PF07702 UTRA domain PMA3_RS10135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PMA3_RS10135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PMA3_RS10150 PF12706 Beta-lactamase superfamily domain PMA3_RS10155 PF00171 Aldehyde dehydrogenase family PMA3_RS10160 PF03328 HpcH/HpaI aldolase/citrate lyase family PMA3_RS10165 PF13378 Enolase C-terminal domain-like PMA3_RS10165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PMA3_RS10170 PF07690 Major Facilitator Superfamily PMA3_RS10175 PF03466 LysR substrate binding domain PMA3_RS10175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS10195 PF03466 LysR substrate binding domain PMA3_RS10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS10205 PF00375 Sodium:dicarboxylate symporter family PMA3_RS10215 PF07690 Major Facilitator Superfamily PMA3_RS10220 PF00107 Zinc-binding dehydrogenase PMA3_RS10220 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS10225 PF12833 Helix-turn-helix domain PMA3_RS10225 PF06719 AraC-type transcriptional regulator N-terminus PMA3_RS10230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PMA3_RS10230 PF13378 Enolase C-terminal domain-like PMA3_RS10235 PF08990 Erythronolide synthase docking PMA3_RS10235 PF00550 Phosphopantetheine attachment site PMA3_RS10235 PF08659 KR domain PMA3_RS10235 PF02801 Beta-ketoacyl synthase, C-terminal domain PMA3_RS10235 PF00109 Beta-ketoacyl synthase, N-terminal domain PMA3_RS10235 PF14765 Polyketide synthase dehydratase PMA3_RS10235 PF16197 Ketoacyl-synthetase C-terminal extension PMA3_RS10235 PF09277 Erythronolide synthase, docking PMA3_RS10235 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS10235 PF00698 Acyl transferase domain PMA3_RS10245 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PMA3_RS10245 PF00355 Rieske [2Fe-2S] domain PMA3_RS10250 PF03466 LysR substrate binding domain PMA3_RS10250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS10255 PF00701 Dihydrodipicolinate synthetase family PMA3_RS10260 PF01266 FAD dependent oxidoreductase PMA3_RS10265 PF00171 Aldehyde dehydrogenase family PMA3_RS10275 PF00005 ABC transporter PMA3_RS10275 PF00571 CBS domain PMA3_RS10280 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS10285 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS10295 PF02705 K+ potassium transporter PMA3_RS10325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS10325 PF03466 LysR substrate binding domain PMA3_RS10340 PF03600 Citrate transporter PMA3_RS10345 PF07690 Major Facilitator Superfamily PMA3_RS10355 PF07690 Major Facilitator Superfamily PMA3_RS10360 PF01261 Xylose isomerase-like TIM barrel PMA3_RS10365 PF00155 Aminotransferase class I and II PMA3_RS10365 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS10370 PF00107 Zinc-binding dehydrogenase PMA3_RS10370 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS10375 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PMA3_RS10380 PF05853 beta-keto acid cleavage enzyme PMA3_RS10385 PF00083 Sugar (and other) transporter PMA3_RS10395 PF00355 Rieske [2Fe-2S] domain PMA3_RS10400 PF03601 Conserved hypothetical protein 698 PMA3_RS10420 PF07044 Protein of unknown function (DUF1329) PMA3_RS10425 PF14870 Photosynthesis system II assembly factor YCF48 PMA3_RS10435 PF12806 Acetyl-CoA dehydrogenase C-terminal like PMA3_RS10435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS10435 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS10435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS10440 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS10440 PF00501 AMP-binding enzyme PMA3_RS10455 PF00294 pfkB family carbohydrate kinase PMA3_RS10460 PF12833 Helix-turn-helix domain PMA3_RS10470 PF08448 PAS fold PMA3_RS10470 PF03705 CheR methyltransferase, all-alpha domain PMA3_RS10470 PF01739 CheR methyltransferase, SAM binding domain PMA3_RS10470 PF01339 CheB methylesterase PMA3_RS10510 PF01042 Endoribonuclease L-PSP PMA3_RS10515 PF00005 ABC transporter PMA3_RS10520 PF01032 FecCD transport family PMA3_RS10525 PF01497 Periplasmic binding protein PMA3_RS10530 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS10530 PF00593 TonB dependent receptor PMA3_RS10535 PF02472 Biopolymer transport protein ExbD/TolR PMA3_RS10545 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath PMA3_RS10570 PF07724 AAA domain (Cdc48 subfamily) PMA3_RS10570 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS10570 PF10431 C-terminal, D2-small domain, of ClpB protein PMA3_RS10570 PF17871 AAA lid domain PMA3_RS10575 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PMA3_RS10575 PF04717 Type VI secretion system, phage-baseplate injector PMA3_RS10575 PF13296 Putative type VI secretion system Rhs element Vgr PMA3_RS10625 PF00156 Phosphoribosyl transferase domain PMA3_RS10625 PF05139 Erythromycin esterase PMA3_RS10630 PF07690 Major Facilitator Superfamily PMA3_RS10645 PF00144 Beta-lactamase PMA3_RS10650 PF03466 LysR substrate binding domain PMA3_RS10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS10655 PF00694 Aconitase C-terminal domain PMA3_RS10665 PF04264 YceI-like domain PMA3_RS10685 PF10672 S-adenosylmethionine-dependent methyltransferase PMA3_RS10685 PF17785 PUA-like domain PMA3_RS10690 PF01292 Prokaryotic cytochrome b561 PMA3_RS10695 PF00174 Oxidoreductase molybdopterin binding domain PMA3_RS10710 PF13419 Haloacid dehalogenase-like hydrolase PMA3_RS10720 PF12833 Helix-turn-helix domain PMA3_RS10720 PF01965 DJ-1/PfpI family PMA3_RS10725 PF00106 short chain dehydrogenase PMA3_RS10730 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS10745 PF03466 LysR substrate binding domain PMA3_RS10745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS10755 PF00465 Iron-containing alcohol dehydrogenase PMA3_RS10760 PF07690 Major Facilitator Superfamily PMA3_RS10765 PF01266 FAD dependent oxidoreductase PMA3_RS10775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS10775 PF03466 LysR substrate binding domain PMA3_RS10785 PF03466 LysR substrate binding domain PMA3_RS10785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS10790 PF00248 Aldo/keto reductase family PMA3_RS10795 PF00106 short chain dehydrogenase PMA3_RS10805 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS10805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS10805 PF00672 HAMP domain PMA3_RS10810 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS10810 PF00072 Response regulator receiver domain PMA3_RS10820 PF13417 Glutathione S-transferase, N-terminal domain PMA3_RS10825 PF01258 Prokaryotic dksA/traR C4-type zinc finger PMA3_RS10830 PF16591 Helical bimodular sensor domain PMA3_RS10830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS10830 PF00672 HAMP domain PMA3_RS10865 PF03334 Na+/H+ antiporter subunit PMA3_RS10870 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) PMA3_RS10880 PF00361 Proton-conducting membrane transporter PMA3_RS10885 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PMA3_RS10890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PMA3_RS10890 PF13244 Domain of unknown function (DUF4040) PMA3_RS10890 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter PMA3_RS10890 PF00361 Proton-conducting membrane transporter PMA3_RS10915 PF00072 Response regulator receiver domain PMA3_RS10915 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS10920 PF03641 Possible lysine decarboxylase PMA3_RS10920 PF11892 Domain of unknown function (DUF3412) PMA3_RS10920 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases PMA3_RS10930 PF00563 EAL domain PMA3_RS10930 PF01590 GAF domain PMA3_RS10930 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS10930 PF00360 Phytochrome region PMA3_RS10950 PF01522 Polysaccharide deacetylase PMA3_RS10955 PF03466 LysR substrate binding domain PMA3_RS10955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS10960 PF13378 Enolase C-terminal domain-like PMA3_RS10960 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PMA3_RS10965 PF02426 Muconolactone delta-isomerase PMA3_RS10970 PF04444 Catechol dioxygenase N terminus PMA3_RS10970 PF00775 Dioxygenase PMA3_RS10975 PF12833 Helix-turn-helix domain PMA3_RS10975 PF14525 AraC-binding-like domain PMA3_RS10985 PF00355 Rieske [2Fe-2S] domain PMA3_RS10985 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PMA3_RS10990 PF00866 Ring hydroxylating beta subunit PMA3_RS10995 PF00175 Oxidoreductase NAD-binding domain PMA3_RS10995 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS10995 PF00970 Oxidoreductase FAD-binding domain PMA3_RS11000 PF00106 short chain dehydrogenase PMA3_RS11005 PF00293 NUDIX domain PMA3_RS11020 PF01139 tRNA-splicing ligase RtcB PMA3_RS11035 PF02082 Transcriptional regulator PMA3_RS11040 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS11045 PF01266 FAD dependent oxidoreductase PMA3_RS11055 PF00120 Glutamine synthetase, catalytic domain PMA3_RS11065 PF01571 Aminomethyltransferase folate-binding domain PMA3_RS11065 PF17806 Sarcosine oxidase A3 domain PMA3_RS11065 PF08669 Glycine cleavage T-protein C-terminal barrel domain PMA3_RS11065 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS11070 PF04267 Sarcosine oxidase, delta subunit family PMA3_RS11075 PF01266 FAD dependent oxidoreductase PMA3_RS11080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PMA3_RS11080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PMA3_RS11085 PF00551 Formyl transferase PMA3_RS11095 PF00120 Glutamine synthetase, catalytic domain PMA3_RS11105 PF01493 GXGXG motif PMA3_RS11110 PF01645 Conserved region in glutamate synthase PMA3_RS11115 PF00909 Ammonium Transporter Family PMA3_RS11120 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PMA3_RS11120 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PMA3_RS11130 PF01571 Aminomethyltransferase folate-binding domain PMA3_RS11130 PF08669 Glycine cleavage T-protein C-terminal barrel domain PMA3_RS11140 PF00551 Formyl transferase PMA3_RS11145 PF08669 Glycine cleavage T-protein C-terminal barrel domain PMA3_RS11145 PF01571 Aminomethyltransferase folate-binding domain PMA3_RS11155 PF00175 Oxidoreductase NAD-binding domain PMA3_RS11155 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS11155 PF00970 Oxidoreductase FAD-binding domain PMA3_RS11165 PF00672 HAMP domain PMA3_RS11165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS11165 PF07730 Histidine kinase PMA3_RS11165 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PMA3_RS11170 PF00072 Response regulator receiver domain PMA3_RS11170 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS11180 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PMA3_RS11185 PF00857 Isochorismatase family PMA3_RS11190 PF00296 Luciferase-like monooxygenase PMA3_RS11195 PF01613 Flavin reductase like domain PMA3_RS11200 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PMA3_RS11205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PMA3_RS11205 PF01409 tRNA synthetases class II core domain (F) PMA3_RS11210 PF08402 TOBE domain PMA3_RS11210 PF00005 ABC transporter PMA3_RS11220 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS11230 PF00925 GTP cyclohydrolase II PMA3_RS11230 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PMA3_RS11240 PF09297 NADH pyrophosphatase zinc ribbon domain PMA3_RS11240 PF00293 NUDIX domain PMA3_RS11245 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS11245 PF07729 FCD domain PMA3_RS11250 PF02627 Carboxymuconolactone decarboxylase family PMA3_RS11255 PF01613 Flavin reductase like domain PMA3_RS11260 PF00171 Aldehyde dehydrogenase family PMA3_RS11265 PF12697 Alpha/beta hydrolase family PMA3_RS11285 PF14331 ImcF-related N-terminal domain PMA3_RS11285 PF06761 Intracellular multiplication and human macrophage-killing PMA3_RS11285 PF06744 Type VI secretion protein IcmF C-terminal PMA3_RS11295 PF06761 Intracellular multiplication and human macrophage-killing PMA3_RS11295 PF06744 Type VI secretion protein IcmF C-terminal PMA3_RS11295 PF14331 ImcF-related N-terminal domain PMA3_RS11305 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE PMA3_RS11315 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS11315 PF07724 AAA domain (Cdc48 subfamily) PMA3_RS11315 PF17871 AAA lid domain PMA3_RS11315 PF10431 C-terminal, D2-small domain, of ClpB protein PMA3_RS11325 PF05947 Type VI secretion system, TssF PMA3_RS11335 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath PMA3_RS11370 PF03747 ADP-ribosylglycohydrolase PMA3_RS11375 PF01129 NAD:arginine ADP-ribosyltransferase PMA3_RS11380 PF06715 Gp5 C-terminal repeat (3 copies) PMA3_RS11380 PF04717 Type VI secretion system, phage-baseplate injector PMA3_RS11395 PF05593 RHS Repeat PMA3_RS11395 PF03527 RHS protein PMA3_RS11410 PF03527 RHS protein PMA3_RS11410 PF05593 RHS Repeat PMA3_RS11430 PF00072 Response regulator receiver domain PMA3_RS11430 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS11435 PF07730 Histidine kinase PMA3_RS11435 PF17200 Single Cache domain 2 PMA3_RS11440 PF02554 Carbon starvation protein CstA PMA3_RS11440 PF13722 5TM C-terminal transporter carbon starvation CstA PMA3_RS11445 PF04328 Selenoprotein, putative PMA3_RS11450 PF18509 Magnetochrome domain PMA3_RS11450 PF17820 PDZ domain PMA3_RS11455 PF00149 Calcineurin-like phosphoesterase PMA3_RS11460 PF02586 SOS response associated peptidase (SRAP) PMA3_RS11465 PF08946 Osmosensory transporter coiled coil PMA3_RS11465 PF00083 Sugar (and other) transporter PMA3_RS11560 PF07690 Major Facilitator Superfamily PMA3_RS11565 PF01613 Flavin reductase like domain PMA3_RS11570 PF00171 Aldehyde dehydrogenase family PMA3_RS11575 PF01425 Amidase PMA3_RS11580 PF00890 FAD binding domain PMA3_RS11585 PF00890 FAD binding domain PMA3_RS11605 PF00182 Chitinase class I PMA3_RS11615 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS11630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS11630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS11645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS11645 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS11645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS11650 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS11650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS11650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS11655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS11655 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS11655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS11660 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS11660 PF00501 AMP-binding enzyme PMA3_RS11665 PF07044 Protein of unknown function (DUF1329) PMA3_RS11675 PF07690 Major Facilitator Superfamily PMA3_RS11680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS11685 PF00501 AMP-binding enzyme PMA3_RS11685 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS11705 PF01575 MaoC like domain PMA3_RS11725 PF00106 short chain dehydrogenase PMA3_RS11735 PF00682 HMGL-like PMA3_RS11735 PF07836 DmpG-like communication domain PMA3_RS11740 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation PMA3_RS11740 PF01118 Semialdehyde dehydrogenase, NAD binding domain PMA3_RS11745 PF01557 Fumarylacetoacetate (FAA) hydrolase family PMA3_RS11755 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS11760 PF00970 Oxidoreductase FAD-binding domain PMA3_RS11760 PF00175 Oxidoreductase NAD-binding domain PMA3_RS11760 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS11765 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS11765 PF00501 AMP-binding enzyme PMA3_RS11775 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS11780 PF12697 Alpha/beta hydrolase family PMA3_RS11800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS11800 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS11800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS11805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS11805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS11805 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS11810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PMA3_RS11815 PF01144 Coenzyme A transferase PMA3_RS11825 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS11830 PF03060 Nitronate monooxygenase PMA3_RS11835 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS11840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS11840 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS11840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS11845 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS11845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS11845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS11850 PF02803 Thiolase, C-terminal domain PMA3_RS11850 PF00108 Thiolase, N-terminal domain PMA3_RS11855 PF00106 short chain dehydrogenase PMA3_RS11865 PF01575 MaoC like domain PMA3_RS11870 PF02803 Thiolase, C-terminal domain PMA3_RS11870 PF00108 Thiolase, N-terminal domain PMA3_RS11880 PF07044 Protein of unknown function (DUF1329) PMA3_RS11885 PF00355 Rieske [2Fe-2S] domain PMA3_RS11890 PF00106 short chain dehydrogenase PMA3_RS11925 PF01507 Phosphoadenosine phosphosulfate reductase family PMA3_RS11930 PF00459 Inositol monophosphatase family PMA3_RS11945 PF12833 Helix-turn-helix domain PMA3_RS11945 PF01965 DJ-1/PfpI family PMA3_RS11950 PF02028 BCCT, betaine/carnitine/choline family transporter PMA3_RS11955 PF00072 Response regulator receiver domain PMA3_RS11955 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS11960 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS11960 PF09308 LuxQ, periplasmic PMA3_RS11960 PF00072 Response regulator receiver domain PMA3_RS11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS11965 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS11965 PF00072 Response regulator receiver domain PMA3_RS11970 PF07730 Histidine kinase PMA3_RS11970 PF05384 Sensor protein DegS PMA3_RS11970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS11985 PF01027 Inhibitor of apoptosis-promoting Bax1 PMA3_RS11990 PF01037 Lrp/AsnC ligand binding domain PMA3_RS11995 PF00892 EamA-like transporter family PMA3_RS12005 PF00171 Aldehyde dehydrogenase family PMA3_RS12015 PF07702 UTRA domain PMA3_RS12015 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS12030 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PMA3_RS12035 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS12040 PF00005 ABC transporter PMA3_RS12055 PF01726 LexA DNA binding domain PMA3_RS12055 PF00717 Peptidase S24-like PMA3_RS12070 PF14579 Helix-hairpin-helix motif PMA3_RS12070 PF01336 OB-fold nucleic acid binding domain PMA3_RS12070 PF02811 PHP domain PMA3_RS12070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PMA3_RS12070 PF07733 Bacterial DNA polymerase III alpha NTPase domain PMA3_RS12075 PF01613 Flavin reductase like domain PMA3_RS12080 PF01979 Amidohydrolase family PMA3_RS12085 PF01979 Amidohydrolase family PMA3_RS12090 PF13416 Bacterial extracellular solute-binding protein PMA3_RS12095 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS12100 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS12105 PF08402 TOBE domain PMA3_RS12105 PF00005 ABC transporter PMA3_RS12115 PF00072 Response regulator receiver domain PMA3_RS12115 PF13426 PAS domain PMA3_RS12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS12120 PF17755 UvrA DNA-binding domain PMA3_RS12125 PF00072 Response regulator receiver domain PMA3_RS12125 PF13426 PAS domain PMA3_RS12125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS12130 PF00072 Response regulator receiver domain PMA3_RS12130 PF01627 Hpt domain PMA3_RS12130 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS12130 PF00672 HAMP domain PMA3_RS12130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS12130 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PMA3_RS12140 PF13581 Histidine kinase-like ATPase domain PMA3_RS12145 PF01740 STAS domain PMA3_RS12150 PF08678 Rsbr N terminal PMA3_RS12150 PF01740 STAS domain PMA3_RS12180 PF03466 LysR substrate binding domain PMA3_RS12180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS12185 PF07969 Amidohydrolase family PMA3_RS12200 PF01343 Peptidase family S49 PMA3_RS12200 PF08496 Peptidase family S49 N-terminal PMA3_RS12225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PMA3_RS12225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PMA3_RS12240 PF02965 Vitamin B12 dependent methionine synthase, activation domain PMA3_RS12240 PF02574 Homocysteine S-methyltransferase PMA3_RS12240 PF02607 B12 binding domain PMA3_RS12240 PF02310 B12 binding domain PMA3_RS12240 PF00809 Pterin binding enzyme PMA3_RS12245 PF01521 Iron-sulphur cluster biosynthesis PMA3_RS12245 PF01106 NifU-like domain PMA3_RS12250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PMA3_RS12255 PF01890 Cobalamin synthesis G C-terminus PMA3_RS12270 PF07683 Cobalamin synthesis protein cobW C-terminal domain PMA3_RS12270 PF02492 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS12275 PF02514 CobN/Magnesium Chelatase PMA3_RS12280 PF07728 AAA domain (dynein-related subfamily) PMA3_RS12280 PF17863 AAA lid domain PMA3_RS12280 PF13519 von Willebrand factor type A domain PMA3_RS12295 PF07690 Major Facilitator Superfamily PMA3_RS12300 PF03466 LysR substrate binding domain PMA3_RS12300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS12305 PF00571 CBS domain PMA3_RS12305 PF03741 Integral membrane protein TerC family PMA3_RS12305 PF03471 Transporter associated domain PMA3_RS12310 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS12315 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS12320 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS12325 PF00005 ABC transporter PMA3_RS12345 PF00294 pfkB family carbohydrate kinase PMA3_RS12355 PF13188 PAS domain PMA3_RS12355 PF00072 Response regulator receiver domain PMA3_RS12355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS12355 PF08448 PAS fold PMA3_RS12355 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS12360 PF00437 Type II/IV secretion system protein PMA3_RS12365 PF00501 AMP-binding enzyme PMA3_RS12365 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS12370 PF00106 short chain dehydrogenase PMA3_RS12380 PF00158 Sigma-54 interaction domain PMA3_RS12380 PF01590 GAF domain PMA3_RS12385 PF00005 ABC transporter PMA3_RS12385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PMA3_RS12390 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS12390 PF12911 N-terminal TM domain of oligopeptide transport permease C PMA3_RS12395 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS12400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PMA3_RS12405 PF05698 Bacterial trigger factor protein (TF) C-terminus PMA3_RS12410 PF00561 alpha/beta hydrolase fold PMA3_RS12415 PF00793 DAHP synthetase I family PMA3_RS12420 PF00072 Response regulator receiver domain PMA3_RS12420 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS12425 PF01541 GIY-YIG catalytic domain PMA3_RS12425 PF08459 UvrC Helix-hairpin-helix N-terminal PMA3_RS12425 PF02151 UvrB/uvrC motif PMA3_RS12430 PF01066 CDP-alcohol phosphatidyltransferase PMA3_RS12455 PF00753 Metallo-beta-lactamase superfamily PMA3_RS12455 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PMA3_RS12455 PF10996 Beta-Casp domain PMA3_RS12465 PF00871 Acetokinase family PMA3_RS12470 PF01515 Phosphate acetyl/butaryl transferase PMA3_RS12475 PF00156 Phosphoribosyl transferase domain PMA3_RS12475 PF05139 Erythromycin esterase PMA3_RS12490 PF00582 Universal stress protein family PMA3_RS12495 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase PMA3_RS12495 PF09363 XFP C-terminal domain PMA3_RS12495 PF09364 XFP N-terminal domain PMA3_RS12505 PF14572 Phosphoribosyl synthetase-associated domain PMA3_RS12505 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PMA3_RS12510 PF00156 Phosphoribosyl transferase domain PMA3_RS12520 PF00156 Phosphoribosyl transferase domain PMA3_RS12520 PF05139 Erythromycin esterase PMA3_RS12525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PMA3_RS12530 PF13545 Crp-like helix-turn-helix domain PMA3_RS12530 PF00027 Cyclic nucleotide-binding domain PMA3_RS12535 PF13520 Amino acid permease PMA3_RS12540 PF04945 YHS domain PMA3_RS12545 PF00690 Cation transporter/ATPase, N-terminus PMA3_RS12545 PF00689 Cation transporting ATPase, C-terminus PMA3_RS12550 PF03573 outer membrane porin, OprD family PMA3_RS12555 PF07690 Major Facilitator Superfamily PMA3_RS12560 PF00857 Isochorismatase family PMA3_RS12565 PF17645 Arylmalonate decarboxylase PMA3_RS12570 PF00561 alpha/beta hydrolase fold PMA3_RS12575 PF01494 FAD binding domain PMA3_RS12585 PF12802 MarR family PMA3_RS12590 PF01799 [2Fe-2S] binding domain PMA3_RS12590 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS12595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PMA3_RS12595 PF00034 Cytochrome c PMA3_RS12595 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PMA3_RS12600 PF17938 Tetracyclin repressor-like, C-terminal domain PMA3_RS12600 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS12630 PF01425 Amidase PMA3_RS12635 PF07687 Peptidase dimerisation domain PMA3_RS12635 PF01546 Peptidase family M20/M25/M40 PMA3_RS12640 PF00005 ABC transporter PMA3_RS12645 PF12399 Branched-chain amino acid ATP-binding cassette transporter PMA3_RS12645 PF00005 ABC transporter PMA3_RS12655 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS12665 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS12665 PF07729 FCD domain PMA3_RS12670 PF01546 Peptidase family M20/M25/M40 PMA3_RS12670 PF07687 Peptidase dimerisation domain PMA3_RS12680 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS12680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS12690 PF08361 MAATS-type transcriptional repressor, C-terminal region PMA3_RS12690 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS12695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS12700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PMA3_RS12710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PMA3_RS12715 PF03435 Saccharopine dehydrogenase NADP binding domain PMA3_RS12715 PF16653 Saccharopine dehydrogenase C-terminal domain PMA3_RS12720 PF02535 ZIP Zinc transporter PMA3_RS12725 PF03575 Peptidase family S51 PMA3_RS12735 PF03466 LysR substrate binding domain PMA3_RS12735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS12740 PF01381 Helix-turn-helix PMA3_RS12740 PF07883 Cupin domain PMA3_RS12745 PF13086 AAA domain PMA3_RS12745 PF13087 AAA domain PMA3_RS12745 PF13195 Protein of unknown function (DUF4011) PMA3_RS12745 PF13195 Protein of unknown function (DUF4011) PMA3_RS12745 PF13087 AAA domain PMA3_RS12745 PF13086 AAA domain PMA3_RS12790 PF02824 TGS domain PMA3_RS12790 PF13291 ACT domain PMA3_RS12790 PF04607 Region found in RelA / SpoT proteins PMA3_RS12800 PF12833 Helix-turn-helix domain PMA3_RS12805 PF01321 Creatinase/Prolidase N-terminal domain PMA3_RS12805 PF00557 Metallopeptidase family M24 PMA3_RS12810 PF00083 Sugar (and other) transporter PMA3_RS12810 PF08946 Osmosensory transporter coiled coil PMA3_RS12815 PF01965 DJ-1/PfpI family PMA3_RS12815 PF12833 Helix-turn-helix domain PMA3_RS12820 PF03264 NapC/NirT cytochrome c family, N-terminal region PMA3_RS12825 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) PMA3_RS12830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PMA3_RS12830 PF00384 Molybdopterin oxidoreductase PMA3_RS12830 PF01568 Molydopterin dinucleotide binding domain PMA3_RS12835 PF03927 NapD protein PMA3_RS12840 PF06796 Periplasmic nitrate reductase protein NapE PMA3_RS12850 PF01062 Bestrophin, RFP-TM, chloride channel PMA3_RS12870 PF04328 Selenoprotein, putative PMA3_RS12880 PF12833 Helix-turn-helix domain PMA3_RS12880 PF01965 DJ-1/PfpI family PMA3_RS12885 PF00795 Carbon-nitrogen hydrolase PMA3_RS12890 PF01738 Dienelactone hydrolase family PMA3_RS12895 PF07681 DoxX PMA3_RS12900 PF00171 Aldehyde dehydrogenase family PMA3_RS12905 PF04972 BON domain PMA3_RS12910 PF00484 Carbonic anhydrase PMA3_RS12915 PF02560 Cyanate lyase C-terminal domain PMA3_RS12920 PF03466 LysR substrate binding domain PMA3_RS12920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS12940 PF01131 DNA topoisomerase PMA3_RS12940 PF01751 Toprim domain PMA3_RS12955 PF01070 FMN-dependent dehydrogenase PMA3_RS12960 PF08946 Osmosensory transporter coiled coil PMA3_RS12960 PF00083 Sugar (and other) transporter PMA3_RS12965 PF05199 GMC oxidoreductase PMA3_RS12965 PF00732 GMC oxidoreductase PMA3_RS12975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS12975 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS12980 PF00072 Response regulator receiver domain PMA3_RS12980 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS12990 PF00106 short chain dehydrogenase PMA3_RS13000 PF00501 AMP-binding enzyme PMA3_RS13010 PF01292 Prokaryotic cytochrome b561 PMA3_RS13015 PF08713 DNA alkylation repair enzyme PMA3_RS13020 PF02254 TrkA-N domain PMA3_RS13020 PF00999 Sodium/hydrogen exchanger family PMA3_RS13030 PF16485 Protealysin propeptide PMA3_RS13030 PF02868 Thermolysin metallopeptidase, alpha-helical domain PMA3_RS13030 PF01447 Thermolysin metallopeptidase, catalytic domain PMA3_RS13035 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PMA3_RS13040 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS13065 PF04542 Sigma-70 region 2 PMA3_RS13065 PF08281 Sigma-70, region 4 PMA3_RS13075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMA3_RS13075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PMA3_RS13075 PF01842 ACT domain PMA3_RS13080 PF00561 alpha/beta hydrolase fold PMA3_RS13085 PF09335 SNARE associated Golgi protein PMA3_RS13105 PF01804 Penicillin amidase PMA3_RS13120 PF02615 Malate/L-lactate dehydrogenase PMA3_RS13135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS13135 PF03466 LysR substrate binding domain PMA3_RS13140 PF00795 Carbon-nitrogen hydrolase PMA3_RS13160 PF13416 Bacterial extracellular solute-binding protein PMA3_RS13165 PF00491 Arginase family PMA3_RS13170 PF03969 AFG1-like ATPase PMA3_RS13185 PF00593 TonB dependent receptor PMA3_RS13185 PF07660 Secretin and TonB N terminus short domain PMA3_RS13185 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS13190 PF00884 Sulfatase PMA3_RS13195 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PMA3_RS13195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PMA3_RS13200 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PMA3_RS13200 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PMA3_RS13210 PF06450 Bacterial Na+/H+ antiporter B (NhaB) PMA3_RS13225 PF00158 Sigma-54 interaction domain PMA3_RS13225 PF02954 Bacterial regulatory protein, Fis family PMA3_RS13225 PF00072 Response regulator receiver domain PMA3_RS13270 PF17200 Single Cache domain 2 PMA3_RS13270 PF00672 HAMP domain PMA3_RS13270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS13275 PF02673 Bacitracin resistance protein BacA PMA3_RS13290 PF03466 LysR substrate binding domain PMA3_RS13290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS13295 PF03466 LysR substrate binding domain PMA3_RS13305 PF00171 Aldehyde dehydrogenase family PMA3_RS13315 PF02525 Flavodoxin-like fold PMA3_RS13325 PF07690 Major Facilitator Superfamily PMA3_RS13330 PF01548 Transposase PMA3_RS13330 PF02371 Transposase IS116/IS110/IS902 family PMA3_RS13335 PF00005 ABC transporter PMA3_RS13335 PF12848 ABC transporter PMA3_RS13345 PF02735 Ku70/Ku80 beta-barrel domain PMA3_RS13350 PF07995 Glucose / Sorbosone dehydrogenase PMA3_RS13370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PMA3_RS13370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PMA3_RS13375 PF08125 Mannitol dehydrogenase C-terminal domain PMA3_RS13375 PF01232 Mannitol dehydrogenase Rossmann domain PMA3_RS13380 PF17912 MalK OB fold domain PMA3_RS13380 PF00005 ABC transporter PMA3_RS13385 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS13390 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS13400 PF12833 Helix-turn-helix domain PMA3_RS13410 PF00072 Response regulator receiver domain PMA3_RS13410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS13410 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS13410 PF08448 PAS fold PMA3_RS13410 PF13188 PAS domain PMA3_RS13415 PF00072 Response regulator receiver domain PMA3_RS13415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS13415 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS13415 PF01627 Hpt domain PMA3_RS13420 PF03705 CheR methyltransferase, all-alpha domain PMA3_RS13420 PF01739 CheR methyltransferase, SAM binding domain PMA3_RS13425 PF01339 CheB methylesterase PMA3_RS13430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS13430 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS13430 PF00072 Response regulator receiver domain PMA3_RS13430 PF01627 Hpt domain PMA3_RS13430 PF00672 HAMP domain PMA3_RS13435 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS13435 PF00072 Response regulator receiver domain PMA3_RS13440 PF00072 Response regulator receiver domain PMA3_RS13440 PF13188 PAS domain PMA3_RS13440 PF08448 PAS fold PMA3_RS13440 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS13440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS13445 PF06745 KaiC PMA3_RS13455 PF04632 Fusaric acid resistance protein family PMA3_RS13465 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS13465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS13470 PF02321 Outer membrane efflux protein PMA3_RS13475 PF00873 AcrB/AcrD/AcrF family PMA3_RS13480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS13490 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PMA3_RS13500 PF00582 Universal stress protein family PMA3_RS13505 PF13520 Amino acid permease PMA3_RS13515 PF00582 Universal stress protein family PMA3_RS13525 PF00034 Cytochrome c PMA3_RS13530 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PMA3_RS13555 PF02424 ApbE family PMA3_RS13560 PF00175 Oxidoreductase NAD-binding domain PMA3_RS13560 PF00667 FAD binding domain PMA3_RS13560 PF00258 Flavodoxin PMA3_RS13575 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS13575 PF00072 Response regulator receiver domain PMA3_RS13580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS13580 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS13595 PF00248 Aldo/keto reductase family PMA3_RS13615 PF06719 AraC-type transcriptional regulator N-terminus PMA3_RS13615 PF12833 Helix-turn-helix domain PMA3_RS13620 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PMA3_RS13625 PF01799 [2Fe-2S] binding domain PMA3_RS13625 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS13635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS13635 PF03466 LysR substrate binding domain PMA3_RS13640 PF00550 Phosphopantetheine attachment site PMA3_RS13640 PF14765 Polyketide synthase dehydratase PMA3_RS13640 PF00109 Beta-ketoacyl synthase, N-terminal domain PMA3_RS13640 PF08659 KR domain PMA3_RS13640 PF00107 Zinc-binding dehydrogenase PMA3_RS13640 PF16197 Ketoacyl-synthetase C-terminal extension PMA3_RS13640 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS13640 PF00698 Acyl transferase domain PMA3_RS13640 PF02801 Beta-ketoacyl synthase, C-terminal domain PMA3_RS13650 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS13650 PF00155 Aminotransferase class I and II PMA3_RS13655 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PMA3_RS13655 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PMA3_RS13655 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PMA3_RS13655 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PMA3_RS13660 PF17954 Quercetinase C-terminal cupin domain PMA3_RS13660 PF02678 Pirin PMA3_RS13665 PF00580 UvrD/REP helicase N-terminal domain PMA3_RS13665 PF13361 UvrD-like helicase C-terminal domain PMA3_RS13680 PF01266 FAD dependent oxidoreductase PMA3_RS13690 PF13416 Bacterial extracellular solute-binding protein PMA3_RS13695 PF00171 Aldehyde dehydrogenase family PMA3_RS13700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS13700 PF03466 LysR substrate binding domain PMA3_RS13705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS13705 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS13705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS13710 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PMA3_RS13710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PMA3_RS13735 PF00083 Sugar (and other) transporter PMA3_RS13740 PF03466 LysR substrate binding domain PMA3_RS13740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS13745 PF08548 Peptidase M10 serralysin C terminal PMA3_RS13745 PF00413 Matrixin PMA3_RS13745 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PMA3_RS13750 PF02974 Protease inhibitor Inh PMA3_RS13755 PF00664 ABC transporter transmembrane region PMA3_RS13755 PF00005 ABC transporter PMA3_RS13760 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS13765 PF02321 Outer membrane efflux protein PMA3_RS13770 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PMA3_RS13780 PF08774 VRR-NUC domain PMA3_RS13780 PF18081 Fanconi anemia-associated nuclease SAP domain PMA3_RS13785 PF13307 Helicase C-terminal domain PMA3_RS13785 PF00929 Exonuclease PMA3_RS13785 PF04851 Type III restriction enzyme, res subunit PMA3_RS13790 PF00072 Response regulator receiver domain PMA3_RS13790 PF13188 PAS domain PMA3_RS13790 PF08448 PAS fold PMA3_RS13790 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS13815 PF00999 Sodium/hydrogen exchanger family PMA3_RS13815 PF03471 Transporter associated domain PMA3_RS13820 PF04893 Yip1 domain PMA3_RS13825 PF02464 Competence-damaged protein PMA3_RS13825 PF18146 Damage-inducible protein CinA KH domain PMA3_RS13825 PF00994 Probable molybdopterin binding domain PMA3_RS13835 PF04239 Protein of unknown function (DUF421) PMA3_RS13845 PF00155 Aminotransferase class I and II PMA3_RS13850 PF01568 Molydopterin dinucleotide binding domain PMA3_RS13850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PMA3_RS13850 PF00384 Molybdopterin oxidoreductase PMA3_RS13855 PF01568 Molydopterin dinucleotide binding domain PMA3_RS13855 PF00384 Molybdopterin oxidoreductase PMA3_RS13855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PMA3_RS13860 PF09163 Formate dehydrogenase N, transmembrane PMA3_RS13860 PF13247 4Fe-4S dicluster domain PMA3_RS13865 PF01292 Prokaryotic cytochrome b561 PMA3_RS13870 PF04216 Protein involved in formate dehydrogenase formation PMA3_RS13875 PF12390 Selenocysteine synthase N terminal PMA3_RS13875 PF03841 L-seryl-tRNA selenium transferase PMA3_RS13880 PF03144 Elongation factor Tu domain 2 PMA3_RS13880 PF00009 Elongation factor Tu GTP binding domain PMA3_RS13880 PF09107 Elongation factor SelB, winged helix PMA3_RS13880 PF09106 Elongation factor SelB, winged helix PMA3_RS13890 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PMA3_RS13895 PF02803 Thiolase, C-terminal domain PMA3_RS13895 PF00108 Thiolase, N-terminal domain PMA3_RS13900 PF00106 short chain dehydrogenase PMA3_RS13905 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PMA3_RS13905 PF12833 Helix-turn-helix domain PMA3_RS13910 PF11339 Protein of unknown function (DUF3141) PMA3_RS13925 PF07728 AAA domain (dynein-related subfamily) PMA3_RS13925 PF08406 CbbQ/NirQ/NorQ C-terminal PMA3_RS13930 PF00115 Cytochrome C and Quinol oxidase polypeptide I PMA3_RS13935 PF00034 Cytochrome c PMA3_RS13940 PF05233 PHB accumulation regulatory domain PMA3_RS13940 PF07879 PHB/PHA accumulation regulator DNA-binding domain PMA3_RS13945 PF03573 outer membrane porin, OprD family PMA3_RS13950 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS13950 PF12806 Acetyl-CoA dehydrogenase C-terminal like PMA3_RS13950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS13950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS13955 PF00474 Sodium:solute symporter family PMA3_RS13965 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS13965 PF00501 AMP-binding enzyme PMA3_RS13970 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS13970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS13970 PF00989 PAS fold PMA3_RS13975 PF00072 Response regulator receiver domain PMA3_RS13975 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS13980 PF01594 AI-2E family transporter PMA3_RS13995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS13995 PF03466 LysR substrate binding domain PMA3_RS14000 PF09347 Domain of unknown function (DUF1989) PMA3_RS14005 PF03466 LysR substrate binding domain PMA3_RS14005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS14010 PF01425 Amidase PMA3_RS14015 PF02525 Flavodoxin-like fold PMA3_RS14030 PF02633 Creatinine amidohydrolase PMA3_RS14040 PF08808 RES domain PMA3_RS14055 PF02321 Outer membrane efflux protein PMA3_RS14060 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS14060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS14070 PF03976 Polyphosphate kinase 2 (PPK2) PMA3_RS14075 PF01740 STAS domain PMA3_RS14075 PF00916 Sulfate permease family PMA3_RS14085 PF00696 Amino acid kinase family PMA3_RS14090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PMA3_RS14090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PMA3_RS14100 PF13520 Amino acid permease PMA3_RS14120 PF03466 LysR substrate binding domain PMA3_RS14120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS14125 PF13183 4Fe-4S dicluster domain PMA3_RS14125 PF01565 FAD binding domain PMA3_RS14125 PF02913 FAD linked oxidases, C-terminal domain PMA3_RS14140 PF03601 Conserved hypothetical protein 698 PMA3_RS14145 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS14145 PF00501 AMP-binding enzyme PMA3_RS14150 PF07690 Major Facilitator Superfamily PMA3_RS14155 PF05853 beta-keto acid cleavage enzyme PMA3_RS14160 PF12833 Helix-turn-helix domain PMA3_RS14160 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PMA3_RS14175 PF07044 Protein of unknown function (DUF1329) PMA3_RS14190 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS14190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS14190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS14190 PF12806 Acetyl-CoA dehydrogenase C-terminal like PMA3_RS14195 PF02525 Flavodoxin-like fold PMA3_RS14200 PF01464 Transglycosylase SLT domain PMA3_RS14200 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS14205 PF07690 Major Facilitator Superfamily PMA3_RS14210 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS14210 PF00175 Oxidoreductase NAD-binding domain PMA3_RS14210 PF00970 Oxidoreductase FAD-binding domain PMA3_RS14215 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PMA3_RS14215 PF00355 Rieske [2Fe-2S] domain PMA3_RS14220 PF03466 LysR substrate binding domain PMA3_RS14220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS14235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS14235 PF03466 LysR substrate binding domain PMA3_RS14240 PF07690 Major Facilitator Superfamily PMA3_RS14245 PF01494 FAD binding domain PMA3_RS14250 PF00324 Amino acid permease PMA3_RS14255 PF02423 Ornithine cyclodeaminase/mu-crystallin family PMA3_RS14260 PF00850 Histone deacetylase domain PMA3_RS14265 PF01037 Lrp/AsnC ligand binding domain PMA3_RS14295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS14295 PF03466 LysR substrate binding domain PMA3_RS14300 PF00593 TonB dependent receptor PMA3_RS14300 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS14305 PF04828 Glutathione-dependent formaldehyde-activating enzyme PMA3_RS14315 PF01266 FAD dependent oxidoreductase PMA3_RS14320 PF00083 Sugar (and other) transporter PMA3_RS14325 PF00701 Dihydrodipicolinate synthetase family PMA3_RS14335 PF03458 UPF0126 domain PMA3_RS14340 PF00324 Amino acid permease PMA3_RS14350 PF04346 Ethanolamine utilisation protein, EutH PMA3_RS14360 PF00561 alpha/beta hydrolase fold PMA3_RS14365 PF03573 outer membrane porin, OprD family PMA3_RS14375 PF07690 Major Facilitator Superfamily PMA3_RS14380 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS14380 PF07729 FCD domain PMA3_RS14385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMA3_RS14385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PMA3_RS14390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PMA3_RS14390 PF13378 Enolase C-terminal domain-like PMA3_RS14395 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS14395 PF07729 FCD domain PMA3_RS14400 PF00106 short chain dehydrogenase PMA3_RS14405 PF00005 ABC transporter PMA3_RS14405 PF00664 ABC transporter transmembrane region PMA3_RS14410 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS14415 PF02321 Outer membrane efflux protein PMA3_RS14420 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PMA3_RS14420 PF12708 Pectate lyase superfamily protein PMA3_RS14420 PF13229 Right handed beta helix region PMA3_RS14435 PF04231 Endonuclease I PMA3_RS14440 PF02223 Thymidylate kinase PMA3_RS14450 PF01590 GAF domain PMA3_RS14450 PF02954 Bacterial regulatory protein, Fis family PMA3_RS14450 PF00158 Sigma-54 interaction domain PMA3_RS14460 PF00158 Sigma-54 interaction domain PMA3_RS14460 PF02954 Bacterial regulatory protein, Fis family PMA3_RS14460 PF13426 PAS domain PMA3_RS14465 PF00005 ABC transporter PMA3_RS14470 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS14470 PF11862 Domain of unknown function (DUF3382) PMA3_RS14475 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS14480 PF13458 Periplasmic binding protein PMA3_RS14485 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS14490 PF14535 AMP-binding enzyme C-terminal domain PMA3_RS14490 PF00501 AMP-binding enzyme PMA3_RS14500 PF13817 IS66 C-terminal element PMA3_RS14500 PF13005 zinc-finger binding domain of transposase IS66 PMA3_RS14500 PF03050 Transposase IS66 family PMA3_RS14500 PF13007 Transposase C of IS166 homeodomain PMA3_RS14510 PF00296 Luciferase-like monooxygenase PMA3_RS14525 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS14525 PF00107 Zinc-binding dehydrogenase PMA3_RS14535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS14540 PF01022 Bacterial regulatory protein, arsR family PMA3_RS14545 PF00107 Zinc-binding dehydrogenase PMA3_RS14545 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS14550 PF03466 LysR substrate binding domain PMA3_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS14570 PF06965 Na+/H+ antiporter 1 PMA3_RS14570 PF13462 Thioredoxin PMA3_RS14575 PF08534 Redoxin PMA3_RS14580 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS14580 PF07724 AAA domain (Cdc48 subfamily) PMA3_RS14580 PF02861 Clp amino terminal domain, pathogenicity island component PMA3_RS14580 PF17871 AAA lid domain PMA3_RS14580 PF10431 C-terminal, D2-small domain, of ClpB protein PMA3_RS14590 PF01037 Lrp/AsnC ligand binding domain PMA3_RS14595 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS14600 PF07687 Peptidase dimerisation domain PMA3_RS14600 PF01546 Peptidase family M20/M25/M40 PMA3_RS14605 PF00557 Metallopeptidase family M24 PMA3_RS14605 PF01321 Creatinase/Prolidase N-terminal domain PMA3_RS14610 PF00083 Sugar (and other) transporter PMA3_RS14615 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS14620 PF00005 ABC transporter PMA3_RS14625 PF00474 Sodium:solute symporter family PMA3_RS14635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PMA3_RS14635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PMA3_RS14640 PF01261 Xylose isomerase-like TIM barrel PMA3_RS14645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PMA3_RS14645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PMA3_RS14645 PF00205 Thiamine pyrophosphate enzyme, central domain PMA3_RS14650 PF07690 Major Facilitator Superfamily PMA3_RS14665 PF04199 Putative cyclase PMA3_RS14670 PF07683 Cobalamin synthesis protein cobW C-terminal domain PMA3_RS14670 PF02492 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS14675 PF01425 Amidase PMA3_RS14685 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS14685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS14690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS14690 PF03466 LysR substrate binding domain PMA3_RS14710 PF12833 Helix-turn-helix domain PMA3_RS14710 PF14525 AraC-binding-like domain PMA3_RS14715 PF00120 Glutamine synthetase, catalytic domain PMA3_RS14720 PF13416 Bacterial extracellular solute-binding protein PMA3_RS14725 PF01266 FAD dependent oxidoreductase PMA3_RS14735 PF04403 Paraquat-inducible protein A PMA3_RS14740 PF02470 MlaD protein PMA3_RS14755 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS14760 PF00005 ABC transporter PMA3_RS14760 PF08402 TOBE domain PMA3_RS14765 PF02899 Phage integrase, N-terminal SAM-like domain PMA3_RS14765 PF00589 Phage integrase family PMA3_RS14770 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PMA3_RS14770 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PMA3_RS14770 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PMA3_RS14775 PF01494 FAD binding domain PMA3_RS14785 PF03466 LysR substrate binding domain PMA3_RS14785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS14790 PF14698 Argininosuccinate lyase C-terminal PMA3_RS14790 PF00206 Lyase PMA3_RS14795 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS14800 PF00005 ABC transporter PMA3_RS14805 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS14820 PF07690 Major Facilitator Superfamily PMA3_RS14830 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS14835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS14835 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS14835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS14840 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS14840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS14840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS14845 PF02803 Thiolase, C-terminal domain PMA3_RS14845 PF00108 Thiolase, N-terminal domain PMA3_RS14850 PF00106 short chain dehydrogenase PMA3_RS14855 PF00501 AMP-binding enzyme PMA3_RS14855 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS14860 PF12833 Helix-turn-helix domain PMA3_RS14865 PF13091 PLD-like domain PMA3_RS14880 PF01925 Sulfite exporter TauE/SafE PMA3_RS14885 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain PMA3_RS14885 PF09297 NADH pyrophosphatase zinc ribbon domain PMA3_RS14885 PF00293 NUDIX domain PMA3_RS14890 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS14895 PF00534 Glycosyl transferases group 1 PMA3_RS14895 PF08323 Starch synthase catalytic domain PMA3_RS14900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PMA3_RS14900 PF11941 Domain of unknown function (DUF3459) PMA3_RS14900 PF00128 Alpha amylase, catalytic domain PMA3_RS14905 PF02446 4-alpha-glucanotransferase PMA3_RS14910 PF00128 Alpha amylase, catalytic domain PMA3_RS14920 PF00128 Alpha amylase, catalytic domain PMA3_RS14920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PMA3_RS14935 PF05401 Nodulation protein S (NodS) PMA3_RS14945 PF03372 Endonuclease/Exonuclease/phosphatase family PMA3_RS14950 PF12951 Passenger-associated-transport-repeat PMA3_RS14965 PF02806 Alpha amylase, C-terminal all-beta domain PMA3_RS14965 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PMA3_RS14965 PF00128 Alpha amylase, catalytic domain PMA3_RS14970 PF16657 Maltogenic Amylase, C-terminal domain PMA3_RS14970 PF00128 Alpha amylase, catalytic domain PMA3_RS14975 PF00128 Alpha amylase, catalytic domain PMA3_RS14975 PF11896 Domain of unknown function (DUF3416) PMA3_RS14980 PF02308 MgtC family PMA3_RS14990 PF13746 4Fe-4S dicluster domain PMA3_RS14990 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PMA3_RS14990 PF12801 4Fe-4S binding domain PMA3_RS14995 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS14995 PF00155 Aminotransferase class I and II PMA3_RS15005 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS15005 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS15005 PF00563 EAL domain PMA3_RS15010 PF02321 Outer membrane efflux protein PMA3_RS15015 PF00873 AcrB/AcrD/AcrF family PMA3_RS15020 PF00873 AcrB/AcrD/AcrF family PMA3_RS15025 PF13533 Biotin-lipoyl like PMA3_RS15030 PF08534 Redoxin PMA3_RS15040 PF03795 YCII-related domain PMA3_RS15050 PF01320 Colicin immunity protein / pyocin immunity protein PMA3_RS15055 PF06958 S-type Pyocin PMA3_RS15070 PF07726 ATPase family associated with various cellular activities (AAA) PMA3_RS15070 PF17863 AAA lid domain PMA3_RS15075 PF01882 Protein of unknown function DUF58 PMA3_RS15090 PF00092 von Willebrand factor type A domain PMA3_RS15090 PF07584 Aerotolerance regulator N-terminal PMA3_RS15115 PF11769 Protein of unknown function (DUF3313) PMA3_RS15135 PF02627 Carboxymuconolactone decarboxylase family PMA3_RS15140 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS15140 PF00155 Aminotransferase class I and II PMA3_RS15160 PF05088 Bacterial NAD-glutamate dehydrogenase PMA3_RS15170 PF17863 AAA lid domain PMA3_RS15170 PF07726 ATPase family associated with various cellular activities (AAA) PMA3_RS15175 PF01882 Protein of unknown function DUF58 PMA3_RS15200 PF00005 ABC transporter PMA3_RS15200 PF12848 ABC transporter PMA3_RS15205 PF12320 Type 5 capsule protein repressor C-terminal domain PMA3_RS15205 PF00149 Calcineurin-like phosphoesterase PMA3_RS15235 PF10282 Lactonase, 7-bladed beta-propeller PMA3_RS15245 PF00171 Aldehyde dehydrogenase family PMA3_RS15255 PF07690 Major Facilitator Superfamily PMA3_RS15260 PF00920 Dehydratase family PMA3_RS15265 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS15305 PF11940 Domain of unknown function (DUF3458) Ig-like fold PMA3_RS15305 PF17432 Domain of unknown function (DUF3458_C) ARM repeats PMA3_RS15305 PF01433 Peptidase family M1 domain PMA3_RS15315 PF07023 Protein of unknown function (DUF1315) PMA3_RS15320 PF01694 Rhomboid family PMA3_RS15320 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease PMA3_RS15325 PF00149 Calcineurin-like phosphoesterase PMA3_RS15330 PF01513 ATP-NAD kinase PMA3_RS15340 PF02040 Arsenical pump membrane protein PMA3_RS15345 PF01022 Bacterial regulatory protein, arsR family PMA3_RS15350 PF03358 NADPH-dependent FMN reductase PMA3_RS15370 PF01276 Orn/Lys/Arg decarboxylase, major domain PMA3_RS15370 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain PMA3_RS15370 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain PMA3_RS15375 PF00929 Exonuclease PMA3_RS15380 PF00075 RNase H PMA3_RS15390 PF16123 Hydroxyacylglutathione hydrolase C-terminus PMA3_RS15390 PF00753 Metallo-beta-lactamase superfamily PMA3_RS15395 PF01476 LysM domain PMA3_RS15395 PF01464 Transglycosylase SLT domain PMA3_RS15400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PMA3_RS15405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PMA3_RS15410 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS15415 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS15415 PF12911 N-terminal TM domain of oligopeptide transport permease C PMA3_RS15420 PF00005 ABC transporter PMA3_RS15420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PMA3_RS15440 PF17158 Membrane-associated sensor, integral membrane domain PMA3_RS15440 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS15450 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PMA3_RS15455 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS15455 PF01799 [2Fe-2S] binding domain PMA3_RS15460 PF12833 Helix-turn-helix domain PMA3_RS15460 PF12852 Cupin PMA3_RS15465 PF01810 LysE type translocator PMA3_RS15475 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PMA3_RS15475 PF12833 Helix-turn-helix domain PMA3_RS15475 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PMA3_RS15475 PF02805 Metal binding domain of Ada PMA3_RS15485 PF04828 Glutathione-dependent formaldehyde-activating enzyme PMA3_RS15495 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) PMA3_RS15500 PF00582 Universal stress protein family PMA3_RS15510 PF06434 Aconitate hydratase 2 N-terminus PMA3_RS15510 PF00330 Aconitase family (aconitate hydratase) PMA3_RS15510 PF11791 Aconitate B N-terminal domain PMA3_RS15535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMA3_RS15535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PMA3_RS15555 PF00072 Response regulator receiver domain PMA3_RS15555 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS15560 PF07687 Peptidase dimerisation domain PMA3_RS15560 PF01546 Peptidase family M20/M25/M40 PMA3_RS15565 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PMA3_RS15570 PF01979 Amidohydrolase family PMA3_RS15575 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS15575 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PMA3_RS15580 PF01180 Dihydroorotate dehydrogenase PMA3_RS15585 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS15585 PF08362 YcdC-like protein, C-terminal region PMA3_RS15590 PF04234 CopC domain PMA3_RS15600 PF03573 outer membrane porin, OprD family PMA3_RS15605 PF01370 NAD dependent epimerase/dehydratase family PMA3_RS15610 PF08450 SMP-30/Gluconolactonase/LRE-like region PMA3_RS15615 PF03480 Bacterial extracellular solute-binding protein, family 7 PMA3_RS15625 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PMA3_RS15635 PF00072 Response regulator receiver domain PMA3_RS15635 PF13426 PAS domain PMA3_RS15635 PF08448 PAS fold PMA3_RS15635 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS15635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS15640 PF00465 Iron-containing alcohol dehydrogenase PMA3_RS15645 PF04055 Radical SAM superfamily PMA3_RS15645 PF13186 Iron-sulfur cluster-binding domain PMA3_RS15650 PF05402 Coenzyme PQQ synthesis protein D (PqqD) PMA3_RS15655 PF03070 TENA/THI-4/PQQC family PMA3_RS15660 PF00171 Aldehyde dehydrogenase family PMA3_RS15665 PF13360 PQQ-like domain PMA3_RS15665 PF01011 PQQ enzyme repeat PMA3_RS15670 PF00753 Metallo-beta-lactamase superfamily PMA3_RS15670 PF16123 Hydroxyacylglutathione hydrolase C-terminus PMA3_RS15685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PMA3_RS15690 PF01011 PQQ enzyme repeat PMA3_RS15690 PF13360 PQQ-like domain PMA3_RS15700 PF00072 Response regulator receiver domain PMA3_RS15700 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS15705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS15705 PF07730 Histidine kinase PMA3_RS15705 PF00672 HAMP domain PMA3_RS15720 PF00005 ABC transporter PMA3_RS15735 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS15735 PF00072 Response regulator receiver domain PMA3_RS15740 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS15740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS15740 PF00072 Response regulator receiver domain PMA3_RS15740 PF09456 RcsC Alpha-Beta-Loop (ABL) PMA3_RS15755 PF01925 Sulfite exporter TauE/SafE PMA3_RS15760 PF00753 Metallo-beta-lactamase superfamily PMA3_RS15765 PF01037 Lrp/AsnC ligand binding domain PMA3_RS15770 PF00676 Dehydrogenase E1 component PMA3_RS15770 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal PMA3_RS15775 PF02779 Transketolase, pyrimidine binding domain PMA3_RS15775 PF02780 Transketolase, C-terminal domain PMA3_RS15780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PMA3_RS15780 PF02817 e3 binding domain PMA3_RS15780 PF00364 Biotin-requiring enzyme PMA3_RS15785 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS15785 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PMA3_RS15790 PF01063 Amino-transferase class IV PMA3_RS15795 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS15795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS15795 PF00672 HAMP domain PMA3_RS15800 PF00072 Response regulator receiver domain PMA3_RS15800 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS15805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS15805 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS15810 PF00873 AcrB/AcrD/AcrF family PMA3_RS15835 PF00356 Bacterial regulatory proteins, lacI family PMA3_RS15845 PF00294 pfkB family carbohydrate kinase PMA3_RS15850 PF07690 Major Facilitator Superfamily PMA3_RS15855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMA3_RS15855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PMA3_RS15860 PF00155 Aminotransferase class I and II PMA3_RS15865 PF03472 Autoinducer binding domain PMA3_RS15865 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS15870 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS15870 PF00072 Response regulator receiver domain PMA3_RS15880 PF02595 Glycerate kinase family PMA3_RS15885 PF17853 GGDEF-like domain PMA3_RS15885 PF13556 PucR C-terminal helix-turn-helix domain PMA3_RS15885 PF05651 Putative sugar diacid recognition PMA3_RS15890 PF00248 Aldo/keto reductase family PMA3_RS15900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PMA3_RS15905 PF12792 CSS motif domain associated with EAL PMA3_RS15905 PF00563 EAL domain PMA3_RS15920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PMA3_RS15925 PF13192 Thioredoxin domain PMA3_RS15925 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS15930 PF10417 C-terminal domain of 1-Cys peroxiredoxin PMA3_RS15930 PF00578 AhpC/TSA family PMA3_RS15945 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS15945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PMA3_RS15950 PF00483 Nucleotidyl transferase PMA3_RS15980 PF13532 2OG-Fe(II) oxygenase superfamily PMA3_RS15985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PMA3_RS15985 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PMA3_RS15985 PF02805 Metal binding domain of Ada PMA3_RS15985 PF12833 Helix-turn-helix domain PMA3_RS15990 PF03060 Nitronate monooxygenase PMA3_RS16005 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS16010 PF00005 ABC transporter PMA3_RS16010 PF03459 TOBE domain PMA3_RS16050 PF00296 Luciferase-like monooxygenase PMA3_RS16055 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS16055 PF00107 Zinc-binding dehydrogenase PMA3_RS16070 PF13426 PAS domain PMA3_RS16070 PF08448 PAS fold PMA3_RS16070 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS16070 PF08447 PAS fold PMA3_RS16070 PF05231 MASE1 PMA3_RS16070 PF00563 EAL domain PMA3_RS16080 PF00563 EAL domain PMA3_RS16080 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS16080 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS16090 PF03466 LysR substrate binding domain PMA3_RS16090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS16095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PMA3_RS16100 PF07929 Plasmid pRiA4b ORF-3-like protein PMA3_RS16125 PF13356 Arm DNA-binding domain PMA3_RS16125 PF00589 Phage integrase family PMA3_RS16165 PF06463 Molybdenum Cofactor Synthesis C PMA3_RS16165 PF04055 Radical SAM superfamily PMA3_RS16170 PF09312 SurA N-terminal domain PMA3_RS16175 PF02665 Nitrate reductase gamma subunit PMA3_RS16180 PF02613 Nitrate reductase delta subunit PMA3_RS16185 PF14711 Respiratory nitrate reductase beta C-terminal PMA3_RS16185 PF13247 4Fe-4S dicluster domain PMA3_RS16190 PF14710 Respiratory nitrate reductase alpha N-terminal PMA3_RS16190 PF00384 Molybdopterin oxidoreductase PMA3_RS16190 PF01568 Molydopterin dinucleotide binding domain PMA3_RS16195 PF07690 Major Facilitator Superfamily PMA3_RS16200 PF07690 Major Facilitator Superfamily PMA3_RS16205 PF00672 HAMP domain PMA3_RS16205 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PMA3_RS16205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS16205 PF07730 Histidine kinase PMA3_RS16210 PF00072 Response regulator receiver domain PMA3_RS16210 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS16220 PF08859 DGC domain PMA3_RS16225 PF02036 SCP-2 sterol transfer family PMA3_RS16230 PF01136 Peptidase family U32 PMA3_RS16235 PF01136 Peptidase family U32 PMA3_RS16240 PF00994 Probable molybdopterin binding domain PMA3_RS16240 PF03454 MoeA C-terminal region (domain IV) PMA3_RS16240 PF03453 MoeA N-terminal region (domain I and II) PMA3_RS16245 PF00994 Probable molybdopterin binding domain PMA3_RS16250 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PMA3_RS16250 PF01243 Pyridoxamine 5'-phosphate oxidase PMA3_RS16255 PF02954 Bacterial regulatory protein, Fis family PMA3_RS16255 PF00158 Sigma-54 interaction domain PMA3_RS16260 PF04405 Domain of Unknown function (DUF542) PMA3_RS16260 PF01814 Hemerythrin HHE cation binding domain PMA3_RS16275 PF00027 Cyclic nucleotide-binding domain PMA3_RS16275 PF13545 Crp-like helix-turn-helix domain PMA3_RS16285 PF00092 von Willebrand factor type A domain PMA3_RS16290 PF00115 Cytochrome C and Quinol oxidase polypeptide I PMA3_RS16295 PF00034 Cytochrome c PMA3_RS16300 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PMA3_RS16305 PF00510 Cytochrome c oxidase subunit III PMA3_RS16310 PF08406 CbbQ/NirQ/NorQ C-terminal PMA3_RS16310 PF07728 AAA domain (dynein-related subfamily) PMA3_RS16315 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PMA3_RS16320 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PMA3_RS16325 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PMA3_RS16335 PF17805 AsnC-like ligand binding domain PMA3_RS16340 PF17805 AsnC-like ligand binding domain PMA3_RS16345 PF17805 AsnC-like ligand binding domain PMA3_RS16345 PF13404 AsnC-type helix-turn-helix domain PMA3_RS16350 PF17805 AsnC-like ligand binding domain PMA3_RS16355 PF04055 Radical SAM superfamily PMA3_RS16355 PF13186 Iron-sulfur cluster-binding domain PMA3_RS16360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PMA3_RS16360 PF10414 Sirohaem synthase dimerisation region PMA3_RS16360 PF14824 Sirohaem biosynthesis protein central PMA3_RS16375 PF05573 NosL PMA3_RS16380 PF12679 ABC-2 family transporter protein PMA3_RS16385 PF00005 ABC transporter PMA3_RS16390 PF05048 Periplasmic copper-binding protein (NosD) PMA3_RS16395 PF18764 Nitrous oxide reductase propeller repeat PMA3_RS16395 PF18793 Nitrous oxide reductase propeller repeat 2 PMA3_RS16400 PF04205 FMN-binding domain PMA3_RS16400 PF12801 4Fe-4S binding domain PMA3_RS16405 PF04055 Radical SAM superfamily PMA3_RS16405 PF06969 HemN C-terminal domain PMA3_RS16410 PF06969 HemN C-terminal domain PMA3_RS16410 PF04055 Radical SAM superfamily PMA3_RS16420 PF00571 CBS domain PMA3_RS16425 PF04324 BFD-like [2Fe-2S] binding domain PMA3_RS16425 PF18267 Rubredoxin NAD+ reductase C-terminal domain PMA3_RS16425 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PMA3_RS16425 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS16425 PF13806 Rieske-like [2Fe-2S] domain PMA3_RS16425 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PMA3_RS16430 PF04324 BFD-like [2Fe-2S] binding domain PMA3_RS16430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PMA3_RS16430 PF18267 Rubredoxin NAD+ reductase C-terminal domain PMA3_RS16430 PF13806 Rieske-like [2Fe-2S] domain PMA3_RS16430 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS16430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PMA3_RS16440 PF00465 Iron-containing alcohol dehydrogenase PMA3_RS16445 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS16450 PF02515 CoA-transferase family III PMA3_RS16455 PF03480 Bacterial extracellular solute-binding protein, family 7 PMA3_RS16460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PMA3_RS16470 PF04909 Amidohydrolase PMA3_RS16475 PF04909 Amidohydrolase PMA3_RS16480 PF00171 Aldehyde dehydrogenase family PMA3_RS16490 PF03573 outer membrane porin, OprD family PMA3_RS16500 PF00456 Transketolase, thiamine diphosphate binding domain PMA3_RS16500 PF17831 Pyruvate dehydrogenase E1 component middle domain PMA3_RS16505 PF01266 FAD dependent oxidoreductase PMA3_RS16510 PF00171 Aldehyde dehydrogenase family PMA3_RS16515 PF00120 Glutamine synthetase, catalytic domain PMA3_RS16520 PF07722 Peptidase C26 PMA3_RS16525 PF00005 ABC transporter PMA3_RS16525 PF08402 TOBE domain PMA3_RS16530 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS16535 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS16540 PF13416 Bacterial extracellular solute-binding protein PMA3_RS16545 PF02834 LigT like Phosphoesterase PMA3_RS16555 PF07237 Protein of unknown function (DUF1428) PMA3_RS16595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS16595 PF03466 LysR substrate binding domain PMA3_RS16600 PF07690 Major Facilitator Superfamily PMA3_RS16620 PF00120 Glutamine synthetase, catalytic domain PMA3_RS16620 PF03951 Glutamine synthetase, beta-Grasp domain PMA3_RS16625 PF00171 Aldehyde dehydrogenase family PMA3_RS16630 PF00465 Iron-containing alcohol dehydrogenase PMA3_RS16645 PF02652 L-lactate permease PMA3_RS16650 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS16650 PF07729 FCD domain PMA3_RS16655 PF01565 FAD binding domain PMA3_RS16655 PF02913 FAD linked oxidases, C-terminal domain PMA3_RS16660 PF01565 FAD binding domain PMA3_RS16665 PF02754 Cysteine-rich domain PMA3_RS16665 PF13183 4Fe-4S dicluster domain PMA3_RS16670 PF03928 Haem-degrading PMA3_RS16675 PF01274 Malate synthase PMA3_RS16680 PF07690 Major Facilitator Superfamily PMA3_RS16685 PF01738 Dienelactone hydrolase family PMA3_RS16690 PF04107 Glutamate-cysteine ligase family 2(GCS2) PMA3_RS16715 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS16715 PF07660 Secretin and TonB N terminus short domain PMA3_RS16715 PF00593 TonB dependent receptor PMA3_RS16720 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS16720 PF08990 Erythronolide synthase docking PMA3_RS16720 PF08659 KR domain PMA3_RS16720 PF00698 Acyl transferase domain PMA3_RS16720 PF00550 Phosphopantetheine attachment site PMA3_RS16720 PF14765 Polyketide synthase dehydratase PMA3_RS16720 PF16197 Ketoacyl-synthetase C-terminal extension PMA3_RS16720 PF00109 Beta-ketoacyl synthase, N-terminal domain PMA3_RS16720 PF02801 Beta-ketoacyl synthase, C-terminal domain PMA3_RS16730 PF13416 Bacterial extracellular solute-binding protein PMA3_RS16735 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS16735 PF00571 CBS domain PMA3_RS16740 PF01053 Cys/Met metabolism PLP-dependent enzyme PMA3_RS16745 PF03741 Integral membrane protein TerC family PMA3_RS16765 PF06441 Epoxide hydrolase N terminus PMA3_RS16780 PF03060 Nitronate monooxygenase PMA3_RS16785 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS16785 PF00107 Zinc-binding dehydrogenase PMA3_RS16790 PF01872 RibD C-terminal domain PMA3_RS16795 PF13419 Haloacid dehalogenase-like hydrolase PMA3_RS16805 PF03475 3-alpha domain PMA3_RS16805 PF03473 MOSC domain PMA3_RS16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS16810 PF03466 LysR substrate binding domain PMA3_RS16815 PF03060 Nitronate monooxygenase PMA3_RS16820 PF01292 Prokaryotic cytochrome b561 PMA3_RS16825 PF00474 Sodium:solute symporter family PMA3_RS16830 PF04341 Protein of unknown function, DUF485 PMA3_RS16835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS16835 PF03466 LysR substrate binding domain PMA3_RS16845 PF01638 HxlR-like helix-turn-helix PMA3_RS16855 PF00171 Aldehyde dehydrogenase family PMA3_RS16860 PF01427 D-ala-D-ala dipeptidase PMA3_RS16865 PF02566 OsmC-like protein PMA3_RS16870 PF02566 OsmC-like protein PMA3_RS16875 PF01047 MarR family PMA3_RS16880 PF00248 Aldo/keto reductase family PMA3_RS16895 PF02350 UDP-N-acetylglucosamine 2-epimerase PMA3_RS16905 PF13632 Glycosyl transferase family group 2 PMA3_RS16905 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PMA3_RS16940 PF02566 OsmC-like protein PMA3_RS16970 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PMA3_RS16970 PF13378 Enolase C-terminal domain-like PMA3_RS16975 PF07690 Major Facilitator Superfamily PMA3_RS16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS16980 PF03466 LysR substrate binding domain PMA3_RS16990 PF00171 Aldehyde dehydrogenase family PMA3_RS17015 PF01042 Endoribonuclease L-PSP PMA3_RS17060 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) PMA3_RS17060 PF04717 Type VI secretion system, phage-baseplate injector PMA3_RS17060 PF13296 Putative type VI secretion system Rhs element Vgr PMA3_RS17065 PF00141 Peroxidase PMA3_RS17090 PF01129 NAD:arginine ADP-ribosyltransferase PMA3_RS17095 PF06039 Malate:quinone oxidoreductase (Mqo) PMA3_RS17100 PF00920 Dehydratase family PMA3_RS17105 PF00080 Copper/zinc superoxide dismutase (SODC) PMA3_RS17110 PF08447 PAS fold PMA3_RS17110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS17110 PF13426 PAS domain PMA3_RS17130 PF01625 Peptide methionine sulfoxide reductase PMA3_RS17135 PF13593 SBF-like CPA transporter family (DUF4137) PMA3_RS17150 PF00005 ABC transporter PMA3_RS17155 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS17160 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS17165 PF01970 Tripartite tricarboxylate transporter TctA family PMA3_RS17195 PF13416 Bacterial extracellular solute-binding protein PMA3_RS17205 PF03466 LysR substrate binding domain PMA3_RS17205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS17220 PF02803 Thiolase, C-terminal domain PMA3_RS17220 PF00108 Thiolase, N-terminal domain PMA3_RS17225 PF00924 Mechanosensitive ion channel PMA3_RS17225 PF12795 Mechanosensitive ion channel porin domain PMA3_RS17225 PF12794 Mechanosensitive ion channel inner membrane domain 1 PMA3_RS17230 PF00578 AhpC/TSA family PMA3_RS17230 PF10417 C-terminal domain of 1-Cys peroxiredoxin PMA3_RS17240 PF05199 GMC oxidoreductase PMA3_RS17240 PF00732 GMC oxidoreductase PMA3_RS17245 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PMA3_RS17250 PF00171 Aldehyde dehydrogenase family PMA3_RS17255 PF00491 Arginase family PMA3_RS17260 PF03466 LysR substrate binding domain PMA3_RS17260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS17265 PF00158 Sigma-54 interaction domain PMA3_RS17265 PF18024 Helix-turn-helix domain PMA3_RS17275 PF00005 ABC transporter PMA3_RS17280 PF00464 Serine hydroxymethyltransferase PMA3_RS17295 PF13298 DNA polymerase Ligase (LigD) PMA3_RS17295 PF01068 ATP dependent DNA ligase domain PMA3_RS17295 PF04679 ATP dependent DNA ligase C terminal region PMA3_RS17310 PF07883 Cupin domain PMA3_RS17320 PF01066 CDP-alcohol phosphatidyltransferase PMA3_RS17330 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS17330 PF00107 Zinc-binding dehydrogenase PMA3_RS17340 PF08241 Methyltransferase domain PMA3_RS17350 PF12833 Helix-turn-helix domain PMA3_RS17350 PF12852 Cupin PMA3_RS17355 PF17991 Thioredoxin like C-terminal domain PMA3_RS17355 PF00578 AhpC/TSA family PMA3_RS17355 PF02683 Cytochrome C biogenesis protein transmembrane region PMA3_RS17370 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS17370 PF00072 Response regulator receiver domain PMA3_RS17375 PF00672 HAMP domain PMA3_RS17375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS17375 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS17385 PF05114 Protein of unknown function (DUF692) PMA3_RS17400 PF02146 Sir2 family PMA3_RS17405 PF03466 LysR substrate binding domain PMA3_RS17405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS17410 PF01144 Coenzyme A transferase PMA3_RS17415 PF01144 Coenzyme A transferase PMA3_RS17420 PF02803 Thiolase, C-terminal domain PMA3_RS17420 PF00108 Thiolase, N-terminal domain PMA3_RS17440 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS17445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PMA3_RS17455 PF04958 Arginine N-succinyltransferase beta subunit PMA3_RS17460 PF04958 Arginine N-succinyltransferase beta subunit PMA3_RS17470 PF07687 Peptidase dimerisation domain PMA3_RS17470 PF01546 Peptidase family M20/M25/M40 PMA3_RS17475 PF05230 MASE2 domain PMA3_RS17475 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS17480 PF12697 Alpha/beta hydrolase family PMA3_RS17505 PF00005 ABC transporter PMA3_RS17510 PF08003 Protein of unknown function (DUF1698) PMA3_RS17520 PF02954 Bacterial regulatory protein, Fis family PMA3_RS17520 PF00158 Sigma-54 interaction domain PMA3_RS17520 PF00072 Response regulator receiver domain PMA3_RS17525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS17525 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS17540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS17540 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS17540 PF00989 PAS fold PMA3_RS17575 PF03783 Curli production assembly/transport component CsgG PMA3_RS17580 PF10614 Type VIII secretion system (T8SS), CsgF protein PMA3_RS17585 PF10627 Curli assembly protein CsgE PMA3_RS17595 PF07963 Prokaryotic N-terminal methylation motif PMA3_RS17595 PF08334 Type II secretion system (T2SS), protein G PMA3_RS17600 PF07963 Prokaryotic N-terminal methylation motif PMA3_RS17600 PF08334 Type II secretion system (T2SS), protein G PMA3_RS17605 PF03958 Bacterial type II/III secretion system short domain PMA3_RS17605 PF00263 Bacterial type II and III secretion system protein PMA3_RS17630 PF00437 Type II/IV secretion system protein PMA3_RS17635 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS17635 PF00072 Response regulator receiver domain PMA3_RS17670 PF10145 Phage-related minor tail protein PMA3_RS17670 PF01464 Transglycosylase SLT domain PMA3_RS17670 PF01551 Peptidase family M23 PMA3_RS17675 PF08334 Type II secretion system (T2SS), protein G PMA3_RS17675 PF07963 Prokaryotic N-terminal methylation motif PMA3_RS17680 PF00482 Type II secretion system (T2SS), protein F PMA3_RS17690 PF03466 LysR substrate binding domain PMA3_RS17690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS17700 PF00857 Isochorismatase family PMA3_RS17705 PF07969 Amidohydrolase family PMA3_RS17715 PF03466 LysR substrate binding domain PMA3_RS17715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS17720 PF12833 Helix-turn-helix domain PMA3_RS17720 PF02311 AraC-like ligand binding domain PMA3_RS17725 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS17730 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS17735 PF01965 DJ-1/PfpI family PMA3_RS17740 PF02678 Pirin PMA3_RS17740 PF17954 Quercetinase C-terminal cupin domain PMA3_RS17745 PF12146 Serine aminopeptidase, S33 PMA3_RS17750 PF00005 ABC transporter PMA3_RS17765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PMA3_RS17765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PMA3_RS17770 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS17785 PF01554 MatE PMA3_RS17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS17810 PF03466 LysR substrate binding domain PMA3_RS17835 PF09722 Protein of unknown function (DUF2384) PMA3_RS17850 PF00324 Amino acid permease PMA3_RS17855 PF12833 Helix-turn-helix domain PMA3_RS17865 PF08402 TOBE domain PMA3_RS17865 PF00005 ABC transporter PMA3_RS17870 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS17875 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS17880 PF05544 Proline racemase PMA3_RS17885 PF09722 Protein of unknown function (DUF2384) PMA3_RS17890 PF08808 RES domain PMA3_RS17900 PF01266 FAD dependent oxidoreductase PMA3_RS17905 PF04324 BFD-like [2Fe-2S] binding domain PMA3_RS17905 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS17915 PF01266 FAD dependent oxidoreductase PMA3_RS17920 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS17925 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS17930 PF00005 ABC transporter PMA3_RS17930 PF08402 TOBE domain PMA3_RS17940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS17940 PF03466 LysR substrate binding domain PMA3_RS17945 PF12833 Helix-turn-helix domain PMA3_RS17945 PF12852 Cupin PMA3_RS17950 PF01638 HxlR-like helix-turn-helix PMA3_RS17955 PF00795 Carbon-nitrogen hydrolase PMA3_RS17965 PF11737 Protein of unknown function (DUF3300) PMA3_RS17995 PF07690 Major Facilitator Superfamily PMA3_RS18005 PF01494 FAD binding domain PMA3_RS18015 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS18015 PF07729 FCD domain PMA3_RS18020 PF07690 Major Facilitator Superfamily PMA3_RS18025 PF13378 Enolase C-terminal domain-like PMA3_RS18025 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PMA3_RS18035 PF13614 AAA domain PMA3_RS18040 PF16868 NMT1-like family PMA3_RS18055 PF00890 FAD binding domain PMA3_RS18055 PF14537 Cytochrome c3 PMA3_RS18065 PF12697 Alpha/beta hydrolase family PMA3_RS18070 PF00682 HMGL-like PMA3_RS18070 PF07836 DmpG-like communication domain PMA3_RS18075 PF01118 Semialdehyde dehydrogenase, NAD binding domain PMA3_RS18075 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation PMA3_RS18080 PF01557 Fumarylacetoacetate (FAA) hydrolase family PMA3_RS18085 PF03928 Haem-degrading PMA3_RS18100 PF07044 Protein of unknown function (DUF1329) PMA3_RS18110 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS18110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS18115 PF01613 Flavin reductase like domain PMA3_RS18120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PMA3_RS18125 PF00158 Sigma-54 interaction domain PMA3_RS18125 PF02830 V4R domain PMA3_RS18125 PF02954 Bacterial regulatory protein, Fis family PMA3_RS18125 PF06505 Activator of aromatic catabolism PMA3_RS18130 PF00857 Isochorismatase family PMA3_RS18140 PF03358 NADPH-dependent FMN reductase PMA3_RS18140 PF04205 FMN-binding domain PMA3_RS18140 PF00890 FAD binding domain PMA3_RS18145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS18145 PF03466 LysR substrate binding domain PMA3_RS18150 PF00766 Electron transfer flavoprotein FAD-binding domain PMA3_RS18150 PF01012 Electron transfer flavoprotein domain PMA3_RS18155 PF01012 Electron transfer flavoprotein domain PMA3_RS18160 PF04205 FMN-binding domain PMA3_RS18160 PF00890 FAD binding domain PMA3_RS18170 PF13291 ACT domain PMA3_RS18170 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS18180 PF02264 LamB porin PMA3_RS18185 PF00342 Phosphoglucose isomerase PMA3_RS18190 PF00356 Bacterial regulatory proteins, lacI family PMA3_RS18195 PF00005 ABC transporter PMA3_RS18200 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS18205 PF13407 Periplasmic binding protein domain PMA3_RS18210 PF00485 Phosphoribulokinase / Uridine kinase family PMA3_RS18215 PF00294 pfkB family carbohydrate kinase PMA3_RS18220 PF04816 tRNA (adenine(22)-N(1))-methyltransferase PMA3_RS18230 PF01636 Phosphotransferase enzyme family PMA3_RS18235 PF00561 alpha/beta hydrolase fold PMA3_RS18240 PF05145 Transition state regulatory protein AbrB PMA3_RS18245 PF03466 LysR substrate binding domain PMA3_RS18245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS18255 PF12852 Cupin PMA3_RS18255 PF12833 Helix-turn-helix domain PMA3_RS18270 PF00664 ABC transporter transmembrane region PMA3_RS18270 PF00005 ABC transporter PMA3_RS18275 PF00561 alpha/beta hydrolase fold PMA3_RS18285 PF03466 LysR substrate binding domain PMA3_RS18285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS18290 PF00171 Aldehyde dehydrogenase family PMA3_RS18300 PF03466 LysR substrate binding domain PMA3_RS18300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS18310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS18310 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS18310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS18320 PF02515 CoA-transferase family III PMA3_RS18325 PF03328 HpcH/HpaI aldolase/citrate lyase family PMA3_RS18330 PF03480 Bacterial extracellular solute-binding protein, family 7 PMA3_RS18335 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PMA3_RS18340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PMA3_RS18345 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS18345 PF00593 TonB dependent receptor PMA3_RS18355 PF02386 Cation transport protein PMA3_RS18360 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS18360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS18360 PF00672 HAMP domain PMA3_RS18375 PF00043 Glutathione S-transferase, C-terminal domain PMA3_RS18375 PF02798 Glutathione S-transferase, N-terminal domain PMA3_RS18380 PF01638 HxlR-like helix-turn-helix PMA3_RS18390 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS18400 PF00561 alpha/beta hydrolase fold PMA3_RS18405 PF02558 Ketopantoate reductase PanE/ApbA PMA3_RS18405 PF08546 Ketopantoate reductase PanE/ApbA C terminal PMA3_RS18410 PF06441 Epoxide hydrolase N terminus PMA3_RS18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS18415 PF03466 LysR substrate binding domain PMA3_RS18425 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family PMA3_RS18465 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PMA3_RS18475 PF00501 AMP-binding enzyme PMA3_RS18475 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS18480 PF00561 alpha/beta hydrolase fold PMA3_RS18485 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PMA3_RS18485 PF12833 Helix-turn-helix domain PMA3_RS18490 PF12833 Helix-turn-helix domain PMA3_RS18500 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS18500 PF13188 PAS domain PMA3_RS18500 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS18500 PF00563 EAL domain PMA3_RS18510 PF01494 FAD binding domain PMA3_RS18520 PF07729 FCD domain PMA3_RS18520 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS18525 PF01566 Natural resistance-associated macrophage protein PMA3_RS18530 PF03746 LamB/YcsF family PMA3_RS18535 PF07286 Protein of unknown function (DUF1445) PMA3_RS18540 PF02682 Carboxyltransferase domain, subdomain C and D PMA3_RS18545 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PMA3_RS18545 PF00289 Biotin carboxylase, N-terminal domain PMA3_RS18545 PF00364 Biotin-requiring enzyme PMA3_RS18545 PF02785 Biotin carboxylase C-terminal domain PMA3_RS18550 PF03573 outer membrane porin, OprD family PMA3_RS18560 PF00158 Sigma-54 interaction domain PMA3_RS18560 PF06505 Activator of aromatic catabolism PMA3_RS18560 PF02954 Bacterial regulatory protein, Fis family PMA3_RS18560 PF02830 V4R domain PMA3_RS18565 PF00171 Aldehyde dehydrogenase family PMA3_RS18570 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PMA3_RS18580 PF01565 FAD binding domain PMA3_RS18580 PF02913 FAD linked oxidases, C-terminal domain PMA3_RS18650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS18650 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS18650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS18655 PF00108 Thiolase, N-terminal domain PMA3_RS18655 PF02803 Thiolase, C-terminal domain PMA3_RS18660 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PMA3_RS18660 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PMA3_RS18665 PF00766 Electron transfer flavoprotein FAD-binding domain PMA3_RS18665 PF01012 Electron transfer flavoprotein domain PMA3_RS18670 PF01012 Electron transfer flavoprotein domain PMA3_RS18675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS18675 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS18675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS18680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS18680 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS18680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS18685 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS18690 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS18695 PF00501 AMP-binding enzyme PMA3_RS18695 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS18705 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS18710 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS18710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS18710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS18715 PF12802 MarR family PMA3_RS18720 PF12399 Branched-chain amino acid ATP-binding cassette transporter PMA3_RS18720 PF00005 ABC transporter PMA3_RS18725 PF00005 ABC transporter PMA3_RS18735 PF02653 Branched-chain amino acid transport system / permease component PMA3_RS18745 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS18745 PF16177 Acetyl-coenzyme A synthetase N-terminus PMA3_RS18745 PF00501 AMP-binding enzyme PMA3_RS18755 PF13452 N-terminal half of MaoC dehydratase PMA3_RS18760 PF03573 outer membrane porin, OprD family PMA3_RS18765 PF00881 Nitroreductase family PMA3_RS18770 PF00296 Luciferase-like monooxygenase PMA3_RS18775 PF00005 ABC transporter PMA3_RS18780 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS18785 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS18790 PF16868 NMT1-like family PMA3_RS18795 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PMA3_RS18805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS18820 PF08019 Phosphoethanolamine transferase EptA/EptB PMA3_RS18820 PF00884 Sulfatase PMA3_RS18825 PF00005 ABC transporter PMA3_RS18835 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS18850 PF00561 alpha/beta hydrolase fold PMA3_RS18855 PF01614 Bacterial transcriptional regulator PMA3_RS18855 PF09339 IclR helix-turn-helix domain PMA3_RS18865 PF00205 Thiamine pyrophosphate enzyme, central domain PMA3_RS18865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PMA3_RS18865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PMA3_RS18870 PF03447 Homoserine dehydrogenase, NAD binding domain PMA3_RS18870 PF01958 Domain of unknown function DUF108 PMA3_RS18875 PF00171 Aldehyde dehydrogenase family PMA3_RS18890 PF00355 Rieske [2Fe-2S] domain PMA3_RS18895 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS18895 PF00970 Oxidoreductase FAD-binding domain PMA3_RS18905 PF00083 Sugar (and other) transporter PMA3_RS18905 PF07690 Major Facilitator Superfamily PMA3_RS18910 PF01425 Amidase PMA3_RS18915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS18915 PF00672 HAMP domain PMA3_RS18915 PF02743 Cache domain PMA3_RS18930 PF09722 Protein of unknown function (DUF2384) PMA3_RS18930 PF01936 NYN domain PMA3_RS18935 PF08447 PAS fold PMA3_RS18935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS18960 PF02899 Phage integrase, N-terminal SAM-like domain PMA3_RS18960 PF00589 Phage integrase family PMA3_RS18975 PF00884 Sulfatase PMA3_RS18985 PF00585 C-terminal regulatory domain of Threonine dehydratase PMA3_RS18985 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS18990 PF02585 GlcNAc-PI de-N-acetylase PMA3_RS18995 PF03737 Aldolase/RraA PMA3_RS19000 PF04303 PrpF protein PMA3_RS19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS19005 PF03466 LysR substrate binding domain PMA3_RS19010 PF04909 Amidohydrolase PMA3_RS19015 PF00375 Sodium:dicarboxylate symporter family PMA3_RS19020 PF03573 outer membrane porin, OprD family PMA3_RS19025 PF00375 Sodium:dicarboxylate symporter family PMA3_RS19030 PF13378 Enolase C-terminal domain-like PMA3_RS19035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS19035 PF03466 LysR substrate binding domain PMA3_RS19055 PF03576 Peptidase family S58 PMA3_RS19060 PF13416 Bacterial extracellular solute-binding protein PMA3_RS19065 PF00795 Carbon-nitrogen hydrolase PMA3_RS19075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS19075 PF03466 LysR substrate binding domain PMA3_RS19080 PF01266 FAD dependent oxidoreductase PMA3_RS19085 PF00266 Aminotransferase class-V PMA3_RS19090 PF07690 Major Facilitator Superfamily PMA3_RS19100 PF00171 Aldehyde dehydrogenase family PMA3_RS19125 PF00884 Sulfatase PMA3_RS19140 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS19140 PF00107 Zinc-binding dehydrogenase PMA3_RS19155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS19155 PF03466 LysR substrate binding domain PMA3_RS19160 PF03573 outer membrane porin, OprD family PMA3_RS19165 PF03600 Citrate transporter PMA3_RS19170 PF00375 Sodium:dicarboxylate symporter family PMA3_RS19175 PF04303 PrpF protein PMA3_RS19180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS19180 PF03466 LysR substrate binding domain PMA3_RS19185 PF00465 Iron-containing alcohol dehydrogenase PMA3_RS19190 PF01266 FAD dependent oxidoreductase PMA3_RS19195 PF03553 Na+/H+ antiporter family PMA3_RS19200 PF00171 Aldehyde dehydrogenase family PMA3_RS19210 PF00202 Aminotransferase class-III PMA3_RS19215 PF07063 Domain of unknown function (DUF1338) PMA3_RS19220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PMA3_RS19220 PF00205 Thiamine pyrophosphate enzyme, central domain PMA3_RS19220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PMA3_RS19225 PF00375 Sodium:dicarboxylate symporter family PMA3_RS19230 PF00180 Isocitrate/isopropylmalate dehydrogenase PMA3_RS19235 PF03466 LysR substrate binding domain PMA3_RS19235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS19245 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS19245 PF00593 TonB dependent receptor PMA3_RS19255 PF03073 TspO/MBR family PMA3_RS19275 PF12833 Helix-turn-helix domain PMA3_RS19275 PF01965 DJ-1/PfpI family PMA3_RS19280 PF07690 Major Facilitator Superfamily PMA3_RS19295 PF00171 Aldehyde dehydrogenase family PMA3_RS19300 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PMA3_RS19300 PF08666 SAF domain PMA3_RS19305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS19305 PF03466 LysR substrate binding domain PMA3_RS19310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS19310 PF03466 LysR substrate binding domain PMA3_RS19315 PF13378 Enolase C-terminal domain-like PMA3_RS19315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PMA3_RS19320 PF12833 Helix-turn-helix domain PMA3_RS19320 PF01965 DJ-1/PfpI family PMA3_RS19325 PF05544 Proline racemase PMA3_RS19330 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS19335 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS19340 PF00571 CBS domain PMA3_RS19340 PF00005 ABC transporter PMA3_RS19345 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PMA3_RS19355 PF00171 Aldehyde dehydrogenase family PMA3_RS19360 PF00701 Dihydrodipicolinate synthetase family PMA3_RS19365 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS19365 PF07729 FCD domain PMA3_RS19370 PF01817 Chorismate mutase type II PMA3_RS19380 PF00034 Cytochrome c PMA3_RS19385 PF02566 OsmC-like protein PMA3_RS19390 PF00155 Aminotransferase class I and II PMA3_RS19390 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS19395 PF00892 EamA-like transporter family PMA3_RS19420 PF03825 Nucleoside H+ symporter PMA3_RS19430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PMA3_RS19430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PMA3_RS19435 PF00356 Bacterial regulatory proteins, lacI family PMA3_RS19440 PF00583 Acetyltransferase (GNAT) family PMA3_RS19445 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PMA3_RS19455 PF07969 Amidohydrolase family PMA3_RS19460 PF07969 Amidohydrolase family PMA3_RS19475 PF00857 Isochorismatase family PMA3_RS19485 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PMA3_RS19485 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PMA3_RS19495 PF00583 Acetyltransferase (GNAT) family PMA3_RS19515 PF06912 Protein of unknown function (DUF1275) PMA3_RS19520 PF02635 DsrE/DsrF-like family PMA3_RS19525 PF02635 DsrE/DsrF-like family PMA3_RS19535 PF04358 DsrC like protein PMA3_RS19540 PF00591 Glycosyl transferase family, a/b domain PMA3_RS19540 PF02885 Glycosyl transferase family, helical bundle domain PMA3_RS19545 PF13409 Glutathione S-transferase, N-terminal domain PMA3_RS19550 PF14824 Sirohaem biosynthesis protein central PMA3_RS19550 PF10414 Sirohaem synthase dimerisation region PMA3_RS19550 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PMA3_RS19555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PMA3_RS19555 PF02403 Seryl-tRNA synthetase N-terminal domain PMA3_RS19560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PMA3_RS19565 PF16193 AAA C-terminal domain PMA3_RS19565 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS19565 PF12002 MgsA AAA+ ATPase C terminal PMA3_RS19570 PF03548 Outer membrane lipoprotein carrier protein LolA PMA3_RS19575 PF09397 Ftsk gamma domain PMA3_RS19575 PF01580 FtsK/SpoIIIE family PMA3_RS19575 PF13491 4TM region of DNA translocase FtsK/SpoIIIE PMA3_RS19575 PF17854 FtsK alpha domain PMA3_RS19580 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS19585 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PMA3_RS19590 PF04376 Arginine-tRNA-protein transferase, N terminus PMA3_RS19590 PF04377 Arginine-tRNA-protein transferase, C terminus PMA3_RS19595 PF01176 Translation initiation factor 1A / IF-1 PMA3_RS19600 PF17871 AAA lid domain PMA3_RS19600 PF02861 Clp amino terminal domain, pathogenicity island component PMA3_RS19600 PF10431 C-terminal, D2-small domain, of ClpB protein PMA3_RS19600 PF07724 AAA domain (Cdc48 subfamily) PMA3_RS19600 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS19605 PF02617 ATP-dependent Clp protease adaptor protein ClpS PMA3_RS19610 PF00313 'Cold-shock' DNA-binding domain PMA3_RS19615 PF00180 Isocitrate/isopropylmalate dehydrogenase PMA3_RS19620 PF03971 Monomeric isocitrate dehydrogenase PMA3_RS19625 PF00293 NUDIX domain PMA3_RS19635 PF04356 Protein of unknown function (DUF489) PMA3_RS19640 PF08328 Adenylosuccinate lyase C-terminal PMA3_RS19640 PF00206 Lyase PMA3_RS19645 PF08007 Cupin superfamily protein PMA3_RS19650 PF13673 Acetyltransferase (GNAT) domain PMA3_RS19660 PF00463 Isocitrate lyase family PMA3_RS19665 PF09334 tRNA synthetases class I (M) PMA3_RS19665 PF08264 Anticodon-binding domain of tRNA PMA3_RS19665 PF13603 Leucyl-tRNA synthetase, Domain 2 PMA3_RS19670 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PMA3_RS19675 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PMA3_RS19680 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PMA3_RS19680 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PMA3_RS19690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PMA3_RS19690 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PMA3_RS19695 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PMA3_RS19695 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PMA3_RS19695 PF00384 Molybdopterin oxidoreductase PMA3_RS19700 PF00146 NADH dehydrogenase PMA3_RS19705 PF12838 4Fe-4S dicluster domain PMA3_RS19710 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PMA3_RS19715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PMA3_RS19720 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PMA3_RS19720 PF00361 Proton-conducting membrane transporter PMA3_RS19725 PF00361 Proton-conducting membrane transporter PMA3_RS19730 PF00361 Proton-conducting membrane transporter PMA3_RS19735 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA PMA3_RS19785 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS19790 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS19795 PF00005 ABC transporter PMA3_RS19795 PF08402 TOBE domain PMA3_RS19800 PF17912 MalK OB fold domain PMA3_RS19800 PF00005 ABC transporter PMA3_RS19805 PF00158 Sigma-54 interaction domain PMA3_RS19805 PF02954 Bacterial regulatory protein, Fis family PMA3_RS19805 PF01590 GAF domain PMA3_RS19810 PF01406 tRNA synthetases class I (C) catalytic domain PMA3_RS19810 PF09190 DALR domain PMA3_RS19815 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PMA3_RS19815 PF00749 tRNA synthetases class I (E and Q), catalytic domain PMA3_RS19820 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PMA3_RS19825 PF00149 Calcineurin-like phosphoesterase PMA3_RS19830 PF07690 Major Facilitator Superfamily PMA3_RS19835 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS19835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS19840 PF02321 Outer membrane efflux protein PMA3_RS19845 PF01047 MarR family PMA3_RS19850 PF04357 TamB, inner membrane protein subunit of TAM complex PMA3_RS19855 PF07244 Surface antigen variable number repeat PMA3_RS19855 PF01103 Surface antigen PMA3_RS19855 PF17243 POTRA domain TamA domain 1 PMA3_RS19865 PF03372 Endonuclease/Exonuclease/phosphatase family PMA3_RS19870 PF00571 CBS domain PMA3_RS19880 PF07759 Protein of unknown function (DUF1615) PMA3_RS19885 PF01494 FAD binding domain PMA3_RS19890 PF02798 Glutathione S-transferase, N-terminal domain PMA3_RS19890 PF00043 Glutathione S-transferase, C-terminal domain PMA3_RS19905 PF00586 AIR synthase related protein, N-terminal domain PMA3_RS19905 PF02769 AIR synthase related protein, C-terminal domain PMA3_RS19935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS19935 PF03466 LysR substrate binding domain PMA3_RS19940 PF13726 Na+-H+ antiporter family PMA3_RS19940 PF03553 Na+/H+ antiporter family PMA3_RS19945 PF00672 HAMP domain PMA3_RS19945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS19950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS19955 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS19955 PF00072 Response regulator receiver domain PMA3_RS19970 PF01242 6-pyruvoyl tetrahydropterin synthase PMA3_RS19975 PF00561 alpha/beta hydrolase fold PMA3_RS19975 PF08386 TAP-like protein PMA3_RS19980 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PMA3_RS19985 PF07969 Amidohydrolase family PMA3_RS19990 PF01678 Diaminopimelate epimerase PMA3_RS19995 PF07690 Major Facilitator Superfamily PMA3_RS20000 PF00593 TonB dependent receptor PMA3_RS20000 PF07660 Secretin and TonB N terminus short domain PMA3_RS20000 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS20010 PF08281 Sigma-70, region 4 PMA3_RS20010 PF04542 Sigma-70 region 2 PMA3_RS20020 PF05860 haemagglutination activity domain PMA3_RS20020 PF13332 Hemagglutinin repeat PMA3_RS20025 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PMA3_RS20025 PF17287 POTRA domain PMA3_RS20025 PF08479 POTRA domain, ShlB-type PMA3_RS20030 PF07690 Major Facilitator Superfamily PMA3_RS20040 PF13533 Biotin-lipoyl like PMA3_RS20045 PF07690 Major Facilitator Superfamily PMA3_RS20055 PF02627 Carboxymuconolactone decarboxylase family PMA3_RS20075 PF00857 Isochorismatase family PMA3_RS20080 PF05726 Pirin C-terminal cupin domain PMA3_RS20080 PF02678 Pirin PMA3_RS20085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS20085 PF03466 LysR substrate binding domain PMA3_RS20090 PF00248 Aldo/keto reductase family PMA3_RS20095 PF00072 Response regulator receiver domain PMA3_RS20095 PF01627 Hpt domain PMA3_RS20095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS20095 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS20095 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS20095 PF00989 PAS fold PMA3_RS20100 PF00072 Response regulator receiver domain PMA3_RS20100 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS20110 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PMA3_RS20120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS20125 PF00005 ABC transporter PMA3_RS20125 PF12704 MacB-like periplasmic core domain PMA3_RS20125 PF02687 FtsX-like permease family PMA3_RS20130 PF02321 Outer membrane efflux protein PMA3_RS20140 PF01244 Membrane dipeptidase (Peptidase family M19) PMA3_RS20155 PF00664 ABC transporter transmembrane region PMA3_RS20155 PF00005 ABC transporter PMA3_RS20165 PF00593 TonB dependent receptor PMA3_RS20165 PF07660 Secretin and TonB N terminus short domain PMA3_RS20165 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS20175 PF00182 Chitinase class I PMA3_RS20185 PF07859 alpha/beta hydrolase fold PMA3_RS20190 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS20190 PF00501 AMP-binding enzyme PMA3_RS20190 PF00550 Phosphopantetheine attachment site PMA3_RS20190 PF00668 Condensation domain PMA3_RS20195 PF00501 AMP-binding enzyme PMA3_RS20195 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS20195 PF00668 Condensation domain PMA3_RS20195 PF00550 Phosphopantetheine attachment site PMA3_RS20200 PF00975 Thioesterase domain PMA3_RS20215 PF00723 Glycosyl hydrolases family 15 PMA3_RS20225 PF01965 DJ-1/PfpI family PMA3_RS20225 PF12833 Helix-turn-helix domain PMA3_RS20230 PF01965 DJ-1/PfpI family PMA3_RS20250 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit PMA3_RS20275 PF00171 Aldehyde dehydrogenase family PMA3_RS20285 PF02575 YbaB/EbfC DNA-binding family PMA3_RS20290 PF12170 DNA polymerase III tau subunit V interacting with alpha PMA3_RS20290 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PMA3_RS20290 PF12169 DNA polymerase III subunits gamma and tau domain III PMA3_RS20300 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS20300 PF00563 EAL domain PMA3_RS20300 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS20315 PF10005 zinc-ribbon domain PMA3_RS20315 PF15887 Putative zinc-binding metallo-peptidase PMA3_RS20320 PF00533 BRCA1 C Terminus (BRCT) domain PMA3_RS20320 PF12826 Helix-hairpin-helix motif PMA3_RS20320 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PMA3_RS20320 PF01653 NAD-dependent DNA ligase adenylation domain PMA3_RS20320 PF03120 NAD-dependent DNA ligase OB-fold domain PMA3_RS20325 PF04354 ZipA, C-terminal FtsZ-binding domain PMA3_RS20330 PF06470 SMC proteins Flexible Hinge Domain PMA3_RS20330 PF02463 RecF/RecN/SMC N terminal domain PMA3_RS20340 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS20340 PF01799 [2Fe-2S] binding domain PMA3_RS20345 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PMA3_RS20345 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PMA3_RS20355 PF01979 Amidohydrolase family PMA3_RS20360 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS20360 PF07729 FCD domain PMA3_RS20365 PF03594 Benzoate membrane transport protein PMA3_RS20370 PF04320 Protein with unknown function (DUF469) PMA3_RS20375 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PMA3_RS20380 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS20385 PF10672 S-adenosylmethionine-dependent methyltransferase PMA3_RS20385 PF01170 Putative RNA methylase family UPF0020 PMA3_RS20385 PF02926 THUMP domain PMA3_RS20390 PF01180 Dihydroorotate dehydrogenase PMA3_RS20395 PF00005 ABC transporter PMA3_RS20400 PF08376 Nitrate and nitrite sensing PMA3_RS20400 PF03861 ANTAR domain PMA3_RS20405 PF07690 Major Facilitator Superfamily PMA3_RS20410 PF03793 PASTA domain PMA3_RS20410 PF00069 Protein kinase domain PMA3_RS20415 PF04324 BFD-like [2Fe-2S] binding domain PMA3_RS20415 PF18267 Rubredoxin NAD+ reductase C-terminal domain PMA3_RS20415 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PMA3_RS20415 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS20415 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PMA3_RS20420 PF00355 Rieske [2Fe-2S] domain PMA3_RS20425 PF04324 BFD-like [2Fe-2S] binding domain PMA3_RS20425 PF01568 Molydopterin dinucleotide binding domain PMA3_RS20425 PF00384 Molybdopterin oxidoreductase PMA3_RS20425 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PMA3_RS20430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PMA3_RS20435 PF00691 OmpA family PMA3_RS20435 PF05736 OprF membrane domain PMA3_RS20445 PF05552 Conserved TM helix PMA3_RS20455 PF01544 CorA-like Mg2+ transporter protein PMA3_RS20460 PF03737 Aldolase/RraA PMA3_RS20470 PF00391 PEP-utilising enzyme, mobile domain PMA3_RS20470 PF02896 PEP-utilising enzyme, TIM barrel domain PMA3_RS20470 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PMA3_RS20475 PF03618 Kinase/pyrophosphorylase PMA3_RS20480 PF03972 MmgE/PrpD family PMA3_RS20485 PF04303 PrpF protein PMA3_RS20490 PF00330 Aconitase family (aconitate hydratase) PMA3_RS20490 PF00694 Aconitase C-terminal domain PMA3_RS20495 PF00285 Citrate synthase, C-terminal domain PMA3_RS20505 PF07729 FCD domain PMA3_RS20505 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS20510 PF08443 RimK-like ATP-grasp domain PMA3_RS20510 PF18030 RimK PreATP-grasp domain PMA3_RS20520 PF18030 RimK PreATP-grasp domain PMA3_RS20520 PF08443 RimK-like ATP-grasp domain PMA3_RS20525 PF04715 Anthranilate synthase component I, N terminal region PMA3_RS20525 PF00425 chorismate binding enzyme PMA3_RS20535 PF01507 Phosphoadenosine phosphosulfate reductase family PMA3_RS20540 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PMA3_RS20545 PF01177 Asp/Glu/Hydantoin racemase PMA3_RS20550 PF03466 LysR substrate binding domain PMA3_RS20550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS20560 PF13419 Haloacid dehalogenase-like hydrolase PMA3_RS20590 PF01906 Putative heavy-metal-binding PMA3_RS20595 PF00144 Beta-lactamase PMA3_RS20625 PF00589 Phage integrase family PMA3_RS20690 PF01553 Acyltransferase PMA3_RS20695 PF01544 CorA-like Mg2+ transporter protein PMA3_RS20700 PF00117 Glutamine amidotransferase class-I PMA3_RS20700 PF00958 GMP synthase C terminal domain PMA3_RS20700 PF02540 NAD synthase PMA3_RS20705 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS20705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PMA3_RS20705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PMA3_RS20710 PF00108 Thiolase, N-terminal domain PMA3_RS20710 PF02803 Thiolase, C-terminal domain PMA3_RS20725 PF14403 Circularly permuted ATP-grasp type 2 PMA3_RS20725 PF04168 A predicted alpha-helical domain with a conserved ER motif. PMA3_RS20730 PF14403 Circularly permuted ATP-grasp type 2 PMA3_RS20755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS20755 PF00672 HAMP domain PMA3_RS20755 PF12729 Four helix bundle sensory module for signal transduction PMA3_RS20785 PF01734 Patatin-like phospholipase PMA3_RS20790 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS20790 PF00072 Response regulator receiver domain PMA3_RS20795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS20795 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS20795 PF13492 GAF domain PMA3_RS20795 PF13493 Domain of unknown function (DUF4118) PMA3_RS20795 PF02702 Osmosensitive K+ channel His kinase sensor domain PMA3_RS20800 PF02669 K+-transporting ATPase, c chain PMA3_RS20810 PF03814 Potassium-transporting ATPase A subunit PMA3_RS20835 PF02801 Beta-ketoacyl synthase, C-terminal domain PMA3_RS20835 PF00109 Beta-ketoacyl synthase, N-terminal domain PMA3_RS20840 PF00106 short chain dehydrogenase PMA3_RS20850 PF02719 Polysaccharide biosynthesis protein PMA3_RS20855 PF00953 Glycosyl transferase family 4 PMA3_RS20860 PF01370 NAD dependent epimerase/dehydratase family PMA3_RS20865 PF00535 Glycosyl transferase family 2 PMA3_RS20870 PF00535 Glycosyl transferase family 2 PMA3_RS20890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PMA3_RS20900 PF05523 WxcM-like, C-terminal PMA3_RS20905 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PMA3_RS20910 PF00483 Nucleotidyl transferase PMA3_RS20915 PF04321 RmlD substrate binding domain PMA3_RS20920 PF16363 GDP-mannose 4,6 dehydratase PMA3_RS20935 PF00216 Bacterial DNA-binding protein PMA3_RS20945 PF00575 S1 RNA binding domain PMA3_RS20950 PF02224 Cytidylate kinase PMA3_RS20955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PMA3_RS20960 PF00155 Aminotransferase class I and II PMA3_RS20965 PF01817 Chorismate mutase type II PMA3_RS20965 PF00800 Prephenate dehydratase PMA3_RS20965 PF01842 ACT domain PMA3_RS20970 PF00266 Aminotransferase class-V PMA3_RS20975 PF00521 DNA gyrase/topoisomerase IV, subunit A PMA3_RS20975 PF03989 DNA gyrase C-terminal domain, beta-propeller PMA3_RS20980 PF01008 Initiation factor 2 subunit family PMA3_RS20985 PF01979 Amidohydrolase family PMA3_RS20995 PF13419 Haloacid dehalogenase-like hydrolase PMA3_RS21000 PF00106 short chain dehydrogenase PMA3_RS21005 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS21010 PF07690 Major Facilitator Superfamily PMA3_RS21030 PF00072 Response regulator receiver domain PMA3_RS21030 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS21030 PF09308 LuxQ, periplasmic PMA3_RS21030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS21035 PF02646 RmuC family PMA3_RS21055 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PMA3_RS21060 PF02386 Cation transport protein PMA3_RS21065 PF02254 TrkA-N domain PMA3_RS21065 PF02080 TrkA-C domain PMA3_RS21070 PF00255 Glutathione peroxidase PMA3_RS21085 PF02654 Cobalamin-5-phosphate synthase PMA3_RS21090 PF00300 Histidine phosphatase superfamily (branch 1) PMA3_RS21095 PF02277 Phosphoribosyltransferase PMA3_RS21100 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PMA3_RS21105 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PMA3_RS21105 PF07685 CobB/CobQ-like glutamine amidotransferase domain PMA3_RS21110 PF00155 Aminotransferase class I and II PMA3_RS21115 PF03186 CobD/Cbib protein PMA3_RS21115 PF17113 Regulatory signalling modulator protein AmpE PMA3_RS21120 PF00881 Nitroreductase family PMA3_RS21125 PF07685 CobB/CobQ-like glutamine amidotransferase domain PMA3_RS21125 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PMA3_RS21130 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PMA3_RS21130 PF12557 Cob(I)alamin adenosyltransferase N terminal PMA3_RS21135 PF07995 Glucose / Sorbosone dehydrogenase PMA3_RS21140 PF01596 O-methyltransferase PMA3_RS21145 PF00877 NlpC/P60 family PMA3_RS21150 PF00877 NlpC/P60 family PMA3_RS21155 PF00308 Bacterial dnaA protein PMA3_RS21160 PF01594 AI-2E family transporter PMA3_RS21170 PF00586 AIR synthase related protein, N-terminal domain PMA3_RS21170 PF02769 AIR synthase related protein, C-terminal domain PMA3_RS21175 PF00551 Formyl transferase PMA3_RS21195 PF05726 Pirin C-terminal cupin domain PMA3_RS21195 PF02678 Pirin PMA3_RS21205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS21205 PF00183 Hsp90 protein PMA3_RS21235 PF05525 Branched-chain amino acid transport protein PMA3_RS21240 PF00549 CoA-ligase PMA3_RS21240 PF02629 CoA binding domain PMA3_RS21245 PF08442 ATP-grasp domain PMA3_RS21245 PF00549 CoA-ligase PMA3_RS21250 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS21250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PMA3_RS21255 PF00364 Biotin-requiring enzyme PMA3_RS21255 PF02817 e3 binding domain PMA3_RS21255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PMA3_RS21260 PF02779 Transketolase, pyrimidine binding domain PMA3_RS21260 PF16870 2-oxoglutarate dehydrogenase C-terminal PMA3_RS21260 PF00676 Dehydrogenase E1 component PMA3_RS21260 PF16078 2-oxoglutarate dehydrogenase N-terminus PMA3_RS21265 PF13085 2Fe-2S iron-sulfur cluster binding domain PMA3_RS21270 PF02910 Fumarate reductase flavoprotein C-term PMA3_RS21270 PF00890 FAD binding domain PMA3_RS21275 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PMA3_RS21280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PMA3_RS21285 PF00285 Citrate synthase, C-terminal domain PMA3_RS21290 PF00474 Sodium:solute symporter family PMA3_RS21295 PF04341 Protein of unknown function, DUF485 PMA3_RS21300 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PMA3_RS21325 PF04333 MlaA lipoprotein PMA3_RS21330 PF05661 Protein of unknown function (DUF808) PMA3_RS21335 PF08362 YcdC-like protein, C-terminal region PMA3_RS21335 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS21350 PF00205 Thiamine pyrophosphate enzyme, central domain PMA3_RS21350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PMA3_RS21350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PMA3_RS21355 PF01261 Xylose isomerase-like TIM barrel PMA3_RS21360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PMA3_RS21360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PMA3_RS21365 PF13660 Domain of unknown function (DUF4147) PMA3_RS21365 PF05161 MOFRL family PMA3_RS21380 PF00520 Ion transport protein PMA3_RS21380 PF00027 Cyclic nucleotide-binding domain PMA3_RS21390 PF07690 Major Facilitator Superfamily PMA3_RS21395 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system PMA3_RS21410 PF12706 Beta-lactamase superfamily domain PMA3_RS21420 PF07969 Amidohydrolase family PMA3_RS21425 PF00005 ABC transporter PMA3_RS21430 PF00005 ABC transporter PMA3_RS21435 PF06007 Phosphonate metabolism protein PhnJ PMA3_RS21440 PF05861 Bacterial phosphonate metabolism protein (PhnI) PMA3_RS21450 PF06754 Phosphonate metabolism protein PhnG PMA3_RS21455 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS21455 PF07702 UTRA domain PMA3_RS21460 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS21470 PF00005 ABC transporter PMA3_RS21485 PF03918 Cytochrome C biogenesis protein PMA3_RS21490 PF08534 Redoxin PMA3_RS21495 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PMA3_RS21495 PF01578 Cytochrome C assembly protein PMA3_RS21500 PF03100 CcmE PMA3_RS21505 PF04995 Heme exporter protein D (CcmD) PMA3_RS21510 PF01578 Cytochrome C assembly protein PMA3_RS21515 PF03379 CcmB protein PMA3_RS21520 PF00005 ABC transporter PMA3_RS21530 PF01312 FlhB HrpN YscU SpaS Family PMA3_RS21555 PF01584 CheW-like domain PMA3_RS21570 PF13614 AAA domain PMA3_RS21575 PF00691 OmpA family PMA3_RS21575 PF13677 Membrane MotB of proton-channel complex MotA/MotB PMA3_RS21580 PF01618 MotA/TolQ/ExbB proton channel family PMA3_RS21585 PF01339 CheB methylesterase PMA3_RS21585 PF00072 Response regulator receiver domain PMA3_RS21590 PF01627 Hpt domain PMA3_RS21590 PF01584 CheW-like domain PMA3_RS21590 PF00072 Response regulator receiver domain PMA3_RS21590 PF02895 Signal transducing histidine kinase, homodimeric domain PMA3_RS21590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS21595 PF04344 Chemotaxis phosphatase, CheZ PMA3_RS21600 PF00072 Response regulator receiver domain PMA3_RS21605 PF04539 Sigma-70 region 3 PMA3_RS21605 PF04545 Sigma-70, region 4 PMA3_RS21605 PF04542 Sigma-70 region 2 PMA3_RS21610 PF10609 NUBPL iron-transfer P-loop NTPase PMA3_RS21615 PF00448 SRP54-type protein, GTPase domain PMA3_RS21620 PF00771 FHIPEP family PMA3_RS21650 PF01312 FlhB HrpN YscU SpaS Family PMA3_RS21655 PF01311 Bacterial export proteins, family 1 PMA3_RS21660 PF01313 Bacterial export proteins, family 3 PMA3_RS21665 PF00813 FliP family PMA3_RS21670 PF04347 Flagellar biosynthesis protein, FliO PMA3_RS21675 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PMA3_RS21680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PMA3_RS21680 PF02154 Flagellar motor switch protein FliM PMA3_RS21685 PF03748 Flagellar basal body-associated protein FliL PMA3_RS21700 PF00072 Response regulator receiver domain PMA3_RS21700 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS21705 PF13466 STAS domain PMA3_RS21715 PF18269 T3SS EscN ATPase C-terminal domain PMA3_RS21715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PMA3_RS21720 PF02108 Flagellar assembly protein FliH PMA3_RS21725 PF14842 FliG N-terminal domain PMA3_RS21725 PF14841 FliG middle domain PMA3_RS21725 PF01706 FliG C-terminal domain PMA3_RS21730 PF08345 Flagellar M-ring protein C-terminal PMA3_RS21730 PF01514 Secretory protein of YscJ/FliF family PMA3_RS21735 PF02049 Flagellar hook-basal body complex protein FliE PMA3_RS21740 PF00158 Sigma-54 interaction domain PMA3_RS21740 PF02954 Bacterial regulatory protein, Fis family PMA3_RS21740 PF00072 Response regulator receiver domain PMA3_RS21745 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS21745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS21745 PF13188 PAS domain PMA3_RS21750 PF02954 Bacterial regulatory protein, Fis family PMA3_RS21750 PF06490 Flagellar regulatory protein FleQ PMA3_RS21750 PF00158 Sigma-54 interaction domain PMA3_RS21760 PF02561 Flagellar protein FliS PMA3_RS21765 PF02465 Flagellar hook-associated protein 2 N-terminus PMA3_RS21765 PF07195 Flagellar hook-associated protein 2 C-terminus PMA3_RS21765 PF07196 Flagellin hook IN motif PMA3_RS21775 PF07196 Flagellin hook IN motif PMA3_RS21775 PF00669 Bacterial flagellin N-terminal helical region PMA3_RS21775 PF00700 Bacterial flagellin C-terminal helical region PMA3_RS21780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PMA3_RS21780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PMA3_RS21785 PF00669 Bacterial flagellin N-terminal helical region PMA3_RS21790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PMA3_RS21790 PF00460 Flagella basal body rod protein PMA3_RS21795 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PMA3_RS21795 PF10135 Rod binding protein PMA3_RS21800 PF02119 Flagellar P-ring protein PMA3_RS21805 PF02107 Flagellar L-ring protein PMA3_RS21810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PMA3_RS21810 PF00460 Flagella basal body rod protein PMA3_RS21815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PMA3_RS21815 PF00460 Flagella basal body rod protein PMA3_RS21820 PF00158 Sigma-54 interaction domain PMA3_RS21820 PF18024 Helix-turn-helix domain PMA3_RS21825 PF00351 Biopterin-dependent aromatic amino acid hydroxylase PMA3_RS21830 PF01329 Pterin 4 alpha carbinolamine dehydratase PMA3_RS21835 PF00155 Aminotransferase class I and II PMA3_RS21845 PF07690 Major Facilitator Superfamily PMA3_RS21850 PF00472 RF-1 domain PMA3_RS21855 PF15723 Motility quorum-sensing regulator, toxin of MqsA PMA3_RS21860 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA PMA3_RS21865 PF02525 Flavodoxin-like fold PMA3_RS21870 PF00324 Amino acid permease PMA3_RS21875 PF00849 RNA pseudouridylate synthase PMA3_RS21875 PF01479 S4 domain PMA3_RS21885 PF04079 Segregation and condensation complex subunit ScpB PMA3_RS21890 PF02616 Segregation and condensation protein ScpA PMA3_RS21895 PF01300 Telomere recombination PMA3_RS21900 PF02811 PHP domain PMA3_RS21905 PF04279 Intracellular septation protein A PMA3_RS21910 PF03795 YCII-related domain PMA3_RS21915 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS21915 PF00072 Response regulator receiver domain PMA3_RS21925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS21925 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS21925 PF08521 Two-component sensor kinase N-terminal PMA3_RS21930 PF00881 Nitroreductase family PMA3_RS21935 PF02386 Cation transport protein PMA3_RS21940 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PMA3_RS21940 PF12833 Helix-turn-helix domain PMA3_RS21985 PF00270 DEAD/DEAH box helicase PMA3_RS21985 PF00570 HRDC domain PMA3_RS21985 PF16124 RecQ zinc-binding PMA3_RS21985 PF00271 Helicase conserved C-terminal domain PMA3_RS21985 PF09382 RQC domain PMA3_RS21995 PF04304 Protein of unknown function (DUF454) PMA3_RS22020 PF02321 Outer membrane efflux protein PMA3_RS22030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS22030 PF03466 LysR substrate binding domain PMA3_RS22035 PF00491 Arginase family PMA3_RS22050 PF00474 Sodium:solute symporter family PMA3_RS22055 PF00753 Metallo-beta-lactamase superfamily PMA3_RS22065 PF00892 EamA-like transporter family PMA3_RS22070 PF17783 CvfB-like winged helix domain PMA3_RS22070 PF13509 S1 domain PMA3_RS22105 PF00271 Helicase conserved C-terminal domain PMA3_RS22105 PF00270 DEAD/DEAH box helicase PMA3_RS22110 PF00924 Mechanosensitive ion channel PMA3_RS22115 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS22115 PF18563 TubC N-terminal docking domain PMA3_RS22115 PF00501 AMP-binding enzyme PMA3_RS22115 PF00550 Phosphopantetheine attachment site PMA3_RS22115 PF00668 Condensation domain PMA3_RS22130 PF00892 EamA-like transporter family PMA3_RS22135 PF02525 Flavodoxin-like fold PMA3_RS22150 PF00561 alpha/beta hydrolase fold PMA3_RS22155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PMA3_RS22160 PF00664 ABC transporter transmembrane region PMA3_RS22160 PF00005 ABC transporter PMA3_RS22165 PF00230 Major intrinsic protein PMA3_RS22180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PMA3_RS22180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PMA3_RS22185 PF00270 DEAD/DEAH box helicase PMA3_RS22185 PF11898 Domain of unknown function (DUF3418) PMA3_RS22185 PF04408 Helicase associated domain (HA2) PMA3_RS22185 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PMA3_RS22185 PF00271 Helicase conserved C-terminal domain PMA3_RS22190 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) PMA3_RS22200 PF00171 Aldehyde dehydrogenase family PMA3_RS22210 PF13378 Enolase C-terminal domain-like PMA3_RS22210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PMA3_RS22215 PF01548 Transposase PMA3_RS22215 PF02371 Transposase IS116/IS110/IS902 family PMA3_RS22240 PF01970 Tripartite tricarboxylate transporter TctA family PMA3_RS22245 PF03466 LysR substrate binding domain PMA3_RS22245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS22255 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS22275 PF17871 AAA lid domain PMA3_RS22275 PF10431 C-terminal, D2-small domain, of ClpB protein PMA3_RS22275 PF02861 Clp amino terminal domain, pathogenicity island component PMA3_RS22275 PF07724 AAA domain (Cdc48 subfamily) PMA3_RS22275 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS22285 PF02626 Carboxyltransferase domain, subdomain A and B PMA3_RS22290 PF02682 Carboxyltransferase domain, subdomain C and D PMA3_RS22295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS22295 PF03466 LysR substrate binding domain PMA3_RS22305 PF13230 Glutamine amidotransferases class-II PMA3_RS22315 PF00326 Prolyl oligopeptidase family PMA3_RS22315 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain PMA3_RS22330 PF01844 HNH endonuclease PMA3_RS22350 PF03692 Putative zinc- or iron-chelating domain PMA3_RS22360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMA3_RS22365 PF05166 YcgL domain PMA3_RS22370 PF00570 HRDC domain PMA3_RS22370 PF01612 3'-5' exonuclease PMA3_RS22375 PF00120 Glutamine synthetase, catalytic domain PMA3_RS22380 PF07690 Major Facilitator Superfamily PMA3_RS22385 PF03466 LysR substrate binding domain PMA3_RS22385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS22390 PF08241 Methyltransferase domain PMA3_RS22400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS22400 PF03466 LysR substrate binding domain PMA3_RS22415 PF02607 B12 binding domain PMA3_RS22415 PF13411 MerR HTH family regulatory protein PMA3_RS22420 PF00072 Response regulator receiver domain PMA3_RS22420 PF13426 PAS domain PMA3_RS22420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS22430 PF00106 short chain dehydrogenase PMA3_RS22485 PF01259 SAICAR synthetase PMA3_RS22490 PF00753 Metallo-beta-lactamase superfamily PMA3_RS22495 PF06804 NlpB/DapX lipoprotein PMA3_RS22500 PF00701 Dihydrodipicolinate synthetase family PMA3_RS22510 PF00578 AhpC/TSA family PMA3_RS22515 PF01594 AI-2E family transporter PMA3_RS22520 PF01206 Sulfurtransferase TusA PMA3_RS22525 PF01435 Peptidase family M48 PMA3_RS22525 PF13181 Tetratricopeptide repeat PMA3_RS22530 PF13180 PDZ domain PMA3_RS22535 PF17188 MucB/RseB C-terminal domain PMA3_RS22535 PF03888 MucB/RseB N-terminal domain PMA3_RS22540 PF03873 Anti sigma-E protein RseA, C-terminal domain PMA3_RS22540 PF03872 Anti sigma-E protein RseA, N-terminal domain PMA3_RS22545 PF08281 Sigma-70, region 4 PMA3_RS22545 PF04542 Sigma-70 region 2 PMA3_RS22550 PF02910 Fumarate reductase flavoprotein C-term PMA3_RS22550 PF00890 FAD binding domain PMA3_RS22560 PF03937 Flavinator of succinate dehydrogenase PMA3_RS22565 PF01571 Aminomethyltransferase folate-binding domain PMA3_RS22575 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS22575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS22580 PF00072 Response regulator receiver domain PMA3_RS22580 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS22595 PF01970 Tripartite tricarboxylate transporter TctA family PMA3_RS22605 PF03167 Uracil DNA glycosylase superfamily PMA3_RS22625 PF00005 ABC transporter PMA3_RS22640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PMA3_RS22640 PF00289 Biotin carboxylase, N-terminal domain PMA3_RS22640 PF02785 Biotin carboxylase C-terminal domain PMA3_RS22645 PF01425 Amidase PMA3_RS22650 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS22660 PF00849 RNA pseudouridylate synthase PMA3_RS22660 PF01479 S4 domain PMA3_RS22665 PF00561 alpha/beta hydrolase fold PMA3_RS22715 PF11471 Maltoporin periplasmic N-terminal extension PMA3_RS22715 PF02264 LamB porin PMA3_RS22720 PF01547 Bacterial extracellular solute-binding protein PMA3_RS22725 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS22730 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS22735 PF17912 MalK OB fold domain PMA3_RS22735 PF00005 ABC transporter PMA3_RS22740 PF08244 Glycosyl hydrolases family 32 C terminal PMA3_RS22740 PF00251 Glycosyl hydrolases family 32 N-terminal domain PMA3_RS22745 PF00356 Bacterial regulatory proteins, lacI family PMA3_RS22745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PMA3_RS22770 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS22770 PF00563 EAL domain PMA3_RS22770 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS22780 PF01381 Helix-turn-helix PMA3_RS22790 PF00465 Iron-containing alcohol dehydrogenase PMA3_RS22800 PF07411 Domain of unknown function (DUF1508) PMA3_RS22810 PF01965 DJ-1/PfpI family PMA3_RS22815 PF00892 EamA-like transporter family PMA3_RS22850 PF04536 TPM domain PMA3_RS22855 PF04011 LemA family PMA3_RS22860 PF01915 Glycosyl hydrolase family 3 C-terminal domain PMA3_RS22860 PF00933 Glycosyl hydrolase family 3 N terminal domain PMA3_RS22860 PF14310 Fibronectin type III-like domain PMA3_RS22865 PF13396 Phospholipase_D-nuclease N-terminal PMA3_RS22865 PF13091 PLD-like domain PMA3_RS22910 PF07690 Major Facilitator Superfamily PMA3_RS22915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS22935 PF00155 Aminotransferase class I and II PMA3_RS22940 PF02447 GntP family permease PMA3_RS22945 PF01202 Shikimate kinase PMA3_RS22950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PMA3_RS22950 PF00356 Bacterial regulatory proteins, lacI family PMA3_RS22975 PF01327 Polypeptide deformylase PMA3_RS22980 PF03631 Virulence factor BrkB PMA3_RS22985 PF05532 CsbD-like PMA3_RS22995 PF00501 AMP-binding enzyme PMA3_RS22995 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS23000 PF13193 AMP-binding enzyme C-terminal domain PMA3_RS23000 PF00501 AMP-binding enzyme PMA3_RS23010 PF01575 MaoC like domain PMA3_RS23015 PF13533 Biotin-lipoyl like PMA3_RS23035 PF12843 Putative quorum-sensing-regulated virulence factor PMA3_RS23045 PF00775 Dioxygenase PMA3_RS23045 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal PMA3_RS23050 PF01081 KDPG and KHG aldolase PMA3_RS23055 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PMA3_RS23060 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PMA3_RS23060 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PMA3_RS23065 PF01418 Helix-turn-helix domain, rpiR family PMA3_RS23065 PF01380 SIS domain PMA3_RS23070 PF01263 Aldose 1-epimerase PMA3_RS23075 PF04966 Carbohydrate-selective porin, OprB family PMA3_RS23080 PF00005 ABC transporter PMA3_RS23080 PF17912 MalK OB fold domain PMA3_RS23085 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS23090 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS23095 PF01547 Bacterial extracellular solute-binding protein PMA3_RS23105 PF00672 HAMP domain PMA3_RS23105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS23105 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS23110 PF00072 Response regulator receiver domain PMA3_RS23110 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS23115 PF02685 Glucokinase PMA3_RS23120 PF00920 Dehydratase family PMA3_RS23125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PMA3_RS23125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PMA3_RS23130 PF02142 MGS-like domain PMA3_RS23135 PF08281 Sigma-70, region 4 PMA3_RS23135 PF04542 Sigma-70 region 2 PMA3_RS23140 PF04773 FecR protein PMA3_RS23140 PF16220 Domain of unknown function (DUF4880) PMA3_RS23145 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS23145 PF00593 TonB dependent receptor PMA3_RS23150 PF01126 Heme oxygenase PMA3_RS23155 PF04304 Protein of unknown function (DUF454) PMA3_RS23160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS23160 PF00672 HAMP domain PMA3_RS23165 PF02515 CoA-transferase family III PMA3_RS23170 PF18024 Helix-turn-helix domain PMA3_RS23170 PF00158 Sigma-54 interaction domain PMA3_RS23175 PF01597 Glycine cleavage H-protein PMA3_RS23180 PF02347 Glycine cleavage system P-protein PMA3_RS23185 PF03313 Serine dehydratase alpha chain PMA3_RS23185 PF03315 Serine dehydratase beta chain PMA3_RS23190 PF01571 Aminomethyltransferase folate-binding domain PMA3_RS23190 PF08669 Glycine cleavage T-protein C-terminal barrel domain PMA3_RS23195 PF00313 'Cold-shock' DNA-binding domain PMA3_RS23205 PF02445 Quinolinate synthetase A protein PMA3_RS23215 PF06508 Queuosine biosynthesis protein QueC PMA3_RS23220 PF04055 Radical SAM superfamily PMA3_RS23225 PF13525 Outer membrane lipoprotein PMA3_RS23225 PF16331 TolA binding protein trimerisation PMA3_RS23230 PF00691 OmpA family PMA3_RS23235 PF04052 TolB amino-terminal domain PMA3_RS23235 PF07676 WD40-like Beta Propeller Repeat PMA3_RS23245 PF02472 Biopolymer transport protein ExbD/TolR PMA3_RS23250 PF01618 MotA/TolQ/ExbB proton channel family PMA3_RS23255 PF03061 Thioesterase superfamily PMA3_RS23260 PF05491 RuvB C-terminal winged helix domain PMA3_RS23260 PF05496 Holliday junction DNA helicase RuvB P-loop domain PMA3_RS23260 PF17864 RuvB AAA lid domain PMA3_RS23265 PF01330 RuvA N terminal domain PMA3_RS23265 PF07499 RuvA, C-terminal domain PMA3_RS23270 PF02075 Crossover junction endodeoxyribonuclease RuvC PMA3_RS23275 PF01709 Transcriptional regulator PMA3_RS23280 PF01336 OB-fold nucleic acid binding domain PMA3_RS23280 PF00152 tRNA synthetases class II (D, K and N) PMA3_RS23280 PF02938 GAD domain PMA3_RS23295 PF00313 'Cold-shock' DNA-binding domain PMA3_RS23300 PF04102 SlyX PMA3_RS23310 PF03573 outer membrane porin, OprD family PMA3_RS23315 PF05552 Conserved TM helix PMA3_RS23315 PF00924 Mechanosensitive ion channel PMA3_RS23320 PF04461 Protein of unknown function (DUF520) PMA3_RS23325 PF08546 Ketopantoate reductase PanE/ApbA C terminal PMA3_RS23325 PF02558 Ketopantoate reductase PanE/ApbA PMA3_RS23330 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS23330 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS23330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS23335 PF01923 Cobalamin adenosyltransferase PMA3_RS23340 PF00293 NUDIX domain PMA3_RS23350 PF01960 ArgJ family PMA3_RS23355 PF07516 SecA Wing and Scaffold domain PMA3_RS23355 PF01043 SecA preprotein cross-linking domain PMA3_RS23355 PF07517 SecA DEAD-like domain PMA3_RS23355 PF02810 SEC-C motif PMA3_RS23365 PF05872 Bacterial protein of unknown function (DUF853) PMA3_RS23370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS23370 PF00672 HAMP domain PMA3_RS23370 PF02743 Cache domain PMA3_RS23380 PF13439 Glycosyltransferase Family 4 PMA3_RS23380 PF00534 Glycosyl transferases group 1 PMA3_RS23395 PF00551 Formyl transferase PMA3_RS23405 PF00929 Exonuclease PMA3_RS23405 PF08411 Exonuclease C-terminal PMA3_RS23430 PF17863 AAA lid domain PMA3_RS23430 PF07726 ATPase family associated with various cellular activities (AAA) PMA3_RS23450 PF02887 Pyruvate kinase, alpha/beta domain PMA3_RS23450 PF00224 Pyruvate kinase, barrel domain PMA3_RS23455 PF00378 Enoyl-CoA hydratase/isomerase PMA3_RS23460 PF00175 Oxidoreductase NAD-binding domain PMA3_RS23460 PF00970 Oxidoreductase FAD-binding domain PMA3_RS23460 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS23465 PF05683 Fumarase C-terminus PMA3_RS23465 PF05681 Fumarate hydratase (Fumerase) PMA3_RS23470 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS23470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS23475 PF02954 Bacterial regulatory protein, Fis family PMA3_RS23475 PF00072 Response regulator receiver domain PMA3_RS23475 PF00158 Sigma-54 interaction domain PMA3_RS23480 PF00083 Sugar (and other) transporter PMA3_RS23505 PF06719 AraC-type transcriptional regulator N-terminus PMA3_RS23505 PF12833 Helix-turn-helix domain PMA3_RS23510 PF08402 TOBE domain PMA3_RS23510 PF00005 ABC transporter PMA3_RS23520 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS23530 PF00171 Aldehyde dehydrogenase family PMA3_RS23535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PMA3_RS23535 PF00205 Thiamine pyrophosphate enzyme, central domain PMA3_RS23535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PMA3_RS23540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS23540 PF03466 LysR substrate binding domain PMA3_RS23550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS23550 PF03466 LysR substrate binding domain PMA3_RS23560 PF12833 Helix-turn-helix domain PMA3_RS23560 PF02311 AraC-like ligand binding domain PMA3_RS23565 PF07690 Major Facilitator Superfamily PMA3_RS23575 PF01370 NAD dependent epimerase/dehydratase family PMA3_RS23580 PF03466 LysR substrate binding domain PMA3_RS23580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS23590 PF01810 LysE type translocator PMA3_RS23595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PMA3_RS23595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PMA3_RS23615 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS23615 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS23615 PF00563 EAL domain PMA3_RS23640 PF13533 Biotin-lipoyl like PMA3_RS23645 PF00873 AcrB/AcrD/AcrF family PMA3_RS23660 PF08521 Two-component sensor kinase N-terminal PMA3_RS23660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS23660 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS23665 PF00072 Response regulator receiver domain PMA3_RS23665 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS23670 PF00118 TCP-1/cpn60 chaperonin family PMA3_RS23675 PF00166 Chaperonin 10 Kd subunit PMA3_RS23680 PF04186 FxsA cytoplasmic membrane protein PMA3_RS23695 PF10609 NUBPL iron-transfer P-loop NTPase PMA3_RS23700 PF09334 tRNA synthetases class I (M) PMA3_RS23700 PF01588 Putative tRNA binding domain PMA3_RS23705 PF02508 Rnf-Nqr subunit, membrane protein PMA3_RS23710 PF04060 Putative Fe-S cluster PMA3_RS23715 PF03116 NQR2, RnfD, RnfE family PMA3_RS23720 PF04205 FMN-binding domain PMA3_RS23725 PF02508 Rnf-Nqr subunit, membrane protein PMA3_RS23730 PF10576 Iron-sulfur binding domain of endonuclease III PMA3_RS23730 PF00633 Helix-hairpin-helix motif PMA3_RS23730 PF00730 HhH-GPD superfamily base excision DNA repair protein PMA3_RS23740 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS23740 PF00072 Response regulator receiver domain PMA3_RS23750 PF00764 Arginosuccinate synthase PMA3_RS23760 PF01979 Amidohydrolase family PMA3_RS23765 PF00929 Exonuclease PMA3_RS23770 PF10417 C-terminal domain of 1-Cys peroxiredoxin PMA3_RS23770 PF00578 AhpC/TSA family PMA3_RS23775 PF04324 BFD-like [2Fe-2S] binding domain PMA3_RS23780 PF00210 Ferritin-like domain PMA3_RS23785 PF00462 Glutaredoxin PMA3_RS23790 PF01568 Molydopterin dinucleotide binding domain PMA3_RS23790 PF00384 Molybdopterin oxidoreductase PMA3_RS23790 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PMA3_RS23800 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PMA3_RS23800 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PMA3_RS23805 PF08402 TOBE domain PMA3_RS23805 PF00005 ABC transporter PMA3_RS23810 PF02567 Phenazine biosynthesis-like protein PMA3_RS23815 PF04073 Aminoacyl-tRNA editing domain PMA3_RS23820 PF00230 Major intrinsic protein PMA3_RS23825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PMA3_RS23825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PMA3_RS23830 PF08220 DeoR-like helix-turn-helix domain PMA3_RS23830 PF00455 DeoR C terminal sensor domain PMA3_RS23835 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PMA3_RS23835 PF01266 FAD dependent oxidoreductase PMA3_RS23840 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS23845 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS23850 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS23855 PF00005 ABC transporter PMA3_RS23860 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS23860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS23860 PF02743 Cache domain PMA3_RS23865 PF02954 Bacterial regulatory protein, Fis family PMA3_RS23865 PF00072 Response regulator receiver domain PMA3_RS23865 PF00158 Sigma-54 interaction domain PMA3_RS23870 PF00561 alpha/beta hydrolase fold PMA3_RS23880 PF08267 Cobalamin-independent synthase, N-terminal domain PMA3_RS23880 PF01717 Cobalamin-independent synthase, Catalytic domain PMA3_RS23885 PF03466 LysR substrate binding domain PMA3_RS23885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS23895 PF01810 LysE type translocator PMA3_RS23900 PF00293 NUDIX domain PMA3_RS23905 PF00072 Response regulator receiver domain PMA3_RS23905 PF02954 Bacterial regulatory protein, Fis family PMA3_RS23905 PF00158 Sigma-54 interaction domain PMA3_RS23910 PF13188 PAS domain PMA3_RS23910 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS23910 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS23910 PF00563 EAL domain PMA3_RS23915 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS23915 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS23915 PF00563 EAL domain PMA3_RS23920 PF03150 Di-haem cytochrome c peroxidase PMA3_RS23920 PF00034 Cytochrome c PMA3_RS23920 PF14376 Haem-binding domain PMA3_RS23930 PF08448 PAS fold PMA3_RS23930 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS23930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS23930 PF00072 Response regulator receiver domain PMA3_RS23930 PF13188 PAS domain PMA3_RS23940 PF00535 Glycosyl transferase family 2 PMA3_RS23945 PF04138 GtrA-like protein PMA3_RS23955 PF00535 Glycosyl transferase family 2 PMA3_RS23960 PF04138 GtrA-like protein PMA3_RS23965 PF00324 Amino acid permease PMA3_RS24005 PF03551 Transcriptional regulator PadR-like family PMA3_RS24010 PF08021 Siderophore-interacting FAD-binding domain PMA3_RS24010 PF04954 Siderophore-interacting protein PMA3_RS24020 PF09905 DNA-binding protein VF530 PMA3_RS24025 PF04966 Carbohydrate-selective porin, OprB family PMA3_RS24030 PF01011 PQQ enzyme repeat PMA3_RS24060 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS24060 PF02190 ATP-dependent protease La (LON) substrate-binding domain PMA3_RS24060 PF05362 Lon protease (S16) C-terminal proteolytic domain PMA3_RS24080 PF07947 YhhN family PMA3_RS24085 PF13649 Methyltransferase domain PMA3_RS24090 PF08003 Protein of unknown function (DUF1698) PMA3_RS24095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PMA3_RS24100 PF07731 Multicopper oxidase PMA3_RS24100 PF00394 Multicopper oxidase PMA3_RS24100 PF07732 Multicopper oxidase PMA3_RS24105 PF00367 phosphotransferase system, EIIB PMA3_RS24105 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PMA3_RS24110 PF00391 PEP-utilising enzyme, mobile domain PMA3_RS24110 PF00381 PTS HPr component phosphorylation site PMA3_RS24110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PMA3_RS24110 PF02896 PEP-utilising enzyme, TIM barrel domain PMA3_RS24110 PF05524 PEP-utilising enzyme, N-terminal PMA3_RS24115 PF02264 LamB porin PMA3_RS24120 PF00128 Alpha amylase, catalytic domain PMA3_RS24120 PF16657 Maltogenic Amylase, C-terminal domain PMA3_RS24125 PF00367 phosphotransferase system, EIIB PMA3_RS24125 PF02378 Phosphotransferase system, EIIC PMA3_RS24130 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS24130 PF07702 UTRA domain PMA3_RS24140 PF00958 GMP synthase C terminal domain PMA3_RS24140 PF00117 Glutamine amidotransferase class-I PMA3_RS24140 PF02540 NAD synthase PMA3_RS24145 PF00571 CBS domain PMA3_RS24145 PF00478 IMP dehydrogenase / GMP reductase domain PMA3_RS24165 PF13742 OB-fold nucleic acid binding domain PMA3_RS24165 PF02601 Exonuclease VII, large subunit PMA3_RS24170 PF01551 Peptidase family M23 PMA3_RS24170 PF08525 Opacity-associated protein A N-terminal motif PMA3_RS24170 PF01476 LysM domain PMA3_RS24180 PF08502 LeuA allosteric (dimerisation) domain PMA3_RS24180 PF00682 HMGL-like PMA3_RS24185 PF00795 Carbon-nitrogen hydrolase PMA3_RS24190 PF00155 Aminotransferase class I and II PMA3_RS24195 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PMA3_RS24195 PF01926 50S ribosome-binding GTPase PMA3_RS24200 PF13360 PQQ-like domain PMA3_RS24210 PF03129 Anticodon binding domain PMA3_RS24210 PF13393 Histidyl-tRNA synthetase PMA3_RS24215 PF04551 GcpE protein PMA3_RS24220 PF13464 Domain of unknown function (DUF4115) PMA3_RS24230 PF04055 Radical SAM superfamily PMA3_RS24235 PF00334 Nucleoside diphosphate kinase PMA3_RS24240 PF04384 Iron-sulphur cluster assembly PMA3_RS24245 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS24250 PF00012 Hsp70 protein PMA3_RS24255 PF07743 HSCB C-terminal oligomerisation domain PMA3_RS24255 PF00226 DnaJ domain PMA3_RS24260 PF01521 Iron-sulphur cluster biosynthesis PMA3_RS24265 PF01592 NifU-like N terminal domain PMA3_RS24270 PF00266 Aminotransferase class-V PMA3_RS24275 PF02082 Transcriptional regulator PMA3_RS24280 PF06426 Serine acetyltransferase, N-terminal PMA3_RS24280 PF00132 Bacterial transferase hexapeptide (six repeats) PMA3_RS24285 PF00588 SpoU rRNA Methylase family PMA3_RS24290 PF00459 Inositol monophosphatase family PMA3_RS24295 PF05433 Glycine zipper 2TM domain PMA3_RS24300 PF02355 Protein export membrane protein PMA3_RS24300 PF07549 SecD/SecF GG Motif PMA3_RS24305 PF07549 SecD/SecF GG Motif PMA3_RS24305 PF02355 Protein export membrane protein PMA3_RS24305 PF13721 SecD export protein N-terminal TM region PMA3_RS24310 PF02699 Preprotein translocase subunit PMA3_RS24315 PF01702 Queuine tRNA-ribosyltransferase PMA3_RS24320 PF02547 Queuosine biosynthesis protein PMA3_RS24355 PF08000 Bacterial PH domain PMA3_RS24375 PF10531 SLBB domain PMA3_RS24375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PMA3_RS24375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PMA3_RS24380 PF01568 Molydopterin dinucleotide binding domain PMA3_RS24380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PMA3_RS24380 PF12838 4Fe-4S dicluster domain PMA3_RS24380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PMA3_RS24380 PF00384 Molybdopterin oxidoreductase PMA3_RS24395 PF07724 AAA domain (Cdc48 subfamily) PMA3_RS24395 PF10431 C-terminal, D2-small domain, of ClpB protein PMA3_RS24395 PF06689 ClpX C4-type zinc finger PMA3_RS24400 PF01625 Peptide methionine sulfoxide reductase PMA3_RS24405 PF01641 SelR domain PMA3_RS24410 PF00072 Response regulator receiver domain PMA3_RS24410 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS24415 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS24415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS24430 PF00155 Aminotransferase class I and II PMA3_RS24430 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS24440 PF11583 P-aminobenzoate N-oxygenase AurF PMA3_RS24450 PF01063 Amino-transferase class IV PMA3_RS24460 PF14834 Glutathione S-transferase, C-terminal domain PMA3_RS24460 PF02798 Glutathione S-transferase, N-terminal domain PMA3_RS24485 PF07729 FCD domain PMA3_RS24485 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS24515 PF02911 Formyl transferase, C-terminal domain PMA3_RS24515 PF00551 Formyl transferase PMA3_RS24525 PF05977 Transmembrane secretion effector PMA3_RS24540 PF01040 UbiA prenyltransferase family PMA3_RS24545 PF03626 Prokaryotic Cytochrome C oxidase subunit IV PMA3_RS24550 PF00510 Cytochrome c oxidase subunit III PMA3_RS24555 PF00115 Cytochrome C and Quinol oxidase polypeptide I PMA3_RS24560 PF06481 COX Aromatic Rich Motif PMA3_RS24560 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PMA3_RS24565 PF02600 Disulfide bond formation protein DsbB PMA3_RS24570 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS24575 PF02391 MoaE protein PMA3_RS24580 PF02597 ThiS family PMA3_RS24585 PF01967 MoaC family PMA3_RS24590 PF02562 PhoH-like protein PMA3_RS24590 PF13638 PIN domain PMA3_RS24600 PF03883 Peroxide stress protein YaaA PMA3_RS24605 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PMA3_RS24605 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PMA3_RS24605 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PMA3_RS24615 PF07238 PilZ domain PMA3_RS24620 PF08238 Sel1 repeat PMA3_RS24625 PF13372 Alginate export PMA3_RS24630 PF05048 Periplasmic copper-binding protein (NosD) PMA3_RS24635 PF16824 C-terminal carbohydrate-binding module PMA3_RS24635 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX PMA3_RS24640 PF05426 Alginate lyase PMA3_RS24645 PF03062 MBOAT, membrane-bound O-acyltransferase family PMA3_RS24650 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX PMA3_RS24655 PF11182 Alginate O-acetyl transferase AlgF PMA3_RS24660 PF01050 Mannose-6-phosphate isomerase PMA3_RS24660 PF00483 Nucleotidyl transferase PMA3_RS24665 PF05785 Rho-activating domain of cytotoxic necrotizing factor PMA3_RS24665 PF18807 Tripartite Tc toxins repeat PMA3_RS24675 PF12256 Insecticide toxin TcdB middle/N-terminal region PMA3_RS24675 PF12255 Insecticide toxin TcdB middle/C-terminal region PMA3_RS24675 PF03534 Salmonella virulence plasmid 65kDa B protein PMA3_RS24690 PF00106 short chain dehydrogenase PMA3_RS24695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PMA3_RS24695 PF00529 HlyD membrane-fusion protein of T1SS PMA3_RS24705 PF04632 Fusaric acid resistance protein family PMA3_RS24710 PF02321 Outer membrane efflux protein PMA3_RS24715 PF03466 LysR substrate binding domain PMA3_RS24715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS24725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PMA3_RS24725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMA3_RS24735 PF00892 EamA-like transporter family PMA3_RS24740 PF14525 AraC-binding-like domain PMA3_RS24740 PF12833 Helix-turn-helix domain PMA3_RS24745 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS24780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS24780 PF03466 LysR substrate binding domain PMA3_RS24785 PF03313 Serine dehydratase alpha chain PMA3_RS24785 PF03315 Serine dehydratase beta chain PMA3_RS24800 PF06146 Phosphate-starvation-inducible E PMA3_RS24810 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PMA3_RS24810 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PMA3_RS24815 PF13369 Transglutaminase-like superfamily PMA3_RS24820 PF13417 Glutathione S-transferase, N-terminal domain PMA3_RS24825 PF01557 Fumarylacetoacetate (FAA) hydrolase family PMA3_RS24830 PF04209 homogentisate 1,2-dioxygenase PMA3_RS24840 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS24840 PF00072 Response regulator receiver domain PMA3_RS24845 PF07044 Protein of unknown function (DUF1329) PMA3_RS24860 PF00106 short chain dehydrogenase PMA3_RS24865 PF12697 Alpha/beta hydrolase family PMA3_RS24870 PF00258 Flavodoxin PMA3_RS24875 PF01740 STAS domain PMA3_RS24875 PF13426 PAS domain PMA3_RS24885 PF13411 MerR HTH family regulatory protein PMA3_RS24895 PF01227 GTP cyclohydrolase I PMA3_RS24900 PF02152 Dihydroneopterin aldolase PMA3_RS24915 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS24920 PF00005 ABC transporter PMA3_RS24925 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS24930 PF01266 FAD dependent oxidoreductase PMA3_RS24935 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS24945 PF13439 Glycosyltransferase Family 4 PMA3_RS24950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS24950 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS24955 PF00255 Glutathione peroxidase PMA3_RS24960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PMA3_RS24965 PF01515 Phosphate acetyl/butaryl transferase PMA3_RS24965 PF07085 DRTGG domain PMA3_RS24970 PF01553 Acyltransferase PMA3_RS24975 PF00082 Subtilase family PMA3_RS24975 PF01483 Proprotein convertase P-domain PMA3_RS25000 PF00664 ABC transporter transmembrane region PMA3_RS25000 PF00005 ABC transporter PMA3_RS25000 PF03412 Peptidase C39 family PMA3_RS25005 PF02321 Outer membrane efflux protein PMA3_RS25010 PF00009 Elongation factor Tu GTP binding domain PMA3_RS25015 PF01507 Phosphoadenosine phosphosulfate reductase family PMA3_RS25020 PF01784 NIF3 (NGG1p interacting factor 3) PMA3_RS25025 PF13180 PDZ domain PMA3_RS25030 PF00155 Aminotransferase class I and II PMA3_RS25035 PF00815 Histidinol dehydrogenase PMA3_RS25040 PF01634 ATP phosphoribosyltransferase PMA3_RS25045 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PMA3_RS25060 PF05494 MlaC protein PMA3_RS25065 PF02470 MlaD protein PMA3_RS25070 PF02405 Permease MlaE PMA3_RS25075 PF00005 ABC transporter PMA3_RS25080 PF01380 SIS domain PMA3_RS25080 PF00571 CBS domain PMA3_RS25095 PF03968 OstA-like protein PMA3_RS25100 PF00005 ABC transporter PMA3_RS25100 PF12399 Branched-chain amino acid ATP-binding cassette transporter PMA3_RS25105 PF04552 Sigma-54, DNA binding domain PMA3_RS25105 PF04963 Sigma-54 factor, core binding domain PMA3_RS25105 PF00309 Sigma-54 factor, Activator interacting domain (AID) PMA3_RS25110 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PMA3_RS25115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PMA3_RS25120 PF03668 P-loop ATPase protein family PMA3_RS25125 PF00381 PTS HPr component phosphorylation site PMA3_RS25130 PF02535 ZIP Zinc transporter PMA3_RS25135 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PMA3_RS25135 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PMA3_RS25145 PF10415 Fumarase C C-terminus PMA3_RS25145 PF00206 Lyase PMA3_RS25155 PF01523 Putative modulator of DNA gyrase PMA3_RS25160 PF04751 Protein of unknown function (DUF615) PMA3_RS25165 PF01523 Putative modulator of DNA gyrase PMA3_RS25170 PF00795 Carbon-nitrogen hydrolase PMA3_RS25185 PF10150 Ribonuclease E/G family PMA3_RS25185 PF00575 S1 RNA binding domain PMA3_RS25190 PF02545 Maf-like protein PMA3_RS25200 PF04085 rod shape-determining protein MreC PMA3_RS25210 PF02686 Glu-tRNAGln amidotransferase C subunit PMA3_RS25215 PF01425 Amidase PMA3_RS25220 PF02637 GatB domain PMA3_RS25220 PF02934 GatB/GatE catalytic domain PMA3_RS25225 PF03330 Lytic transglycolase PMA3_RS25230 PF01699 Sodium/calcium exchanger protein PMA3_RS25235 PF02627 Carboxymuconolactone decarboxylase family PMA3_RS25245 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PMA3_RS25245 PF08666 SAF domain PMA3_RS25250 PF07690 Major Facilitator Superfamily PMA3_RS25255 PF00171 Aldehyde dehydrogenase family PMA3_RS25260 PF00701 Dihydrodipicolinate synthetase family PMA3_RS25270 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS25270 PF07729 FCD domain PMA3_RS25275 PF00005 ABC transporter PMA3_RS25275 PF06472 ABC transporter transmembrane region 2 PMA3_RS25280 PF02954 Bacterial regulatory protein, Fis family PMA3_RS25280 PF00072 Response regulator receiver domain PMA3_RS25285 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS25285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS25295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PMA3_RS25300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PMA3_RS25305 PF03573 outer membrane porin, OprD family PMA3_RS25310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PMA3_RS25315 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS25320 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS25320 PF12911 N-terminal TM domain of oligopeptide transport permease C PMA3_RS25325 PF00005 ABC transporter PMA3_RS25325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PMA3_RS25330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PMA3_RS25330 PF00005 ABC transporter PMA3_RS25355 PF00009 Elongation factor Tu GTP binding domain PMA3_RS25355 PF03144 Elongation factor Tu domain 2 PMA3_RS25355 PF16658 Class II release factor RF3, C-terminal domain PMA3_RS25360 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS25365 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PMA3_RS25370 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS25375 PF00571 CBS domain PMA3_RS25375 PF00005 ABC transporter PMA3_RS25380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PMA3_RS25380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PMA3_RS25395 PF18331 PKHD-type hydroxylase C-terminal domain PMA3_RS25395 PF13640 2OG-Fe(II) oxygenase superfamily PMA3_RS25400 PF00593 TonB dependent receptor PMA3_RS25400 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS25410 PF00258 Flavodoxin PMA3_RS25410 PF00667 FAD binding domain PMA3_RS25410 PF00175 Oxidoreductase NAD-binding domain PMA3_RS25415 PF02378 Phosphotransferase system, EIIC PMA3_RS25415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PMA3_RS25420 PF00294 pfkB family carbohydrate kinase PMA3_RS25425 PF00391 PEP-utilising enzyme, mobile domain PMA3_RS25425 PF05524 PEP-utilising enzyme, N-terminal PMA3_RS25425 PF02896 PEP-utilising enzyme, TIM barrel domain PMA3_RS25425 PF00381 PTS HPr component phosphorylation site PMA3_RS25425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PMA3_RS25430 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PMA3_RS25430 PF00356 Bacterial regulatory proteins, lacI family PMA3_RS25435 PF01026 TatD related DNase PMA3_RS25440 PF02743 Cache domain PMA3_RS25440 PF00672 HAMP domain PMA3_RS25440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS25450 PF01510 N-acetylmuramoyl-L-alanine amidase PMA3_RS25455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PMA3_RS25455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PMA3_RS25470 PF00575 S1 RNA binding domain PMA3_RS25470 PF01138 3' exoribonuclease family, domain 1 PMA3_RS25470 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PMA3_RS25470 PF00013 KH domain PMA3_RS25470 PF03725 3' exoribonuclease family, domain 2 PMA3_RS25475 PF00312 Ribosomal protein S15 PMA3_RS25480 PF01509 TruB family pseudouridylate synthase (N terminal domain) PMA3_RS25480 PF16198 tRNA pseudouridylate synthase B C-terminal domain PMA3_RS25480 PF09157 Pseudouridine synthase II TruB, C-terminal PMA3_RS25485 PF02033 Ribosome-binding factor A PMA3_RS25490 PF00009 Elongation factor Tu GTP binding domain PMA3_RS25490 PF11987 Translation-initiation factor 2 PMA3_RS25490 PF08364 Bacterial translation initiation factor IF-2 associated region PMA3_RS25490 PF04760 Translation initiation factor IF-2, N-terminal region PMA3_RS25495 PF13184 NusA-like KH domain PMA3_RS25495 PF00575 S1 RNA binding domain PMA3_RS25495 PF08529 NusA N-terminal domain PMA3_RS25500 PF17384 RimP C-terminal SH3 domain PMA3_RS25500 PF02576 RimP N-terminal domain PMA3_RS25515 PF03840 Preprotein translocase SecG subunit PMA3_RS25520 PF00121 Triosephosphate isomerase PMA3_RS25525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PMA3_RS25525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PMA3_RS25525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PMA3_RS25525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PMA3_RS25530 PF00809 Pterin binding enzyme PMA3_RS25535 PF17862 AAA+ lid domain PMA3_RS25535 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS25535 PF06480 FtsH Extracellular PMA3_RS25535 PF01434 Peptidase family M41 PMA3_RS25540 PF01728 FtsJ-like methyltransferase PMA3_RS25545 PF01985 CRS1 / YhbY (CRM) domain PMA3_RS25555 PF03449 Transcription elongation factor, N-terminal PMA3_RS25555 PF01272 Transcription elongation factor, GreA/GreB, C-term PMA3_RS25560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PMA3_RS25560 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PMA3_RS25560 PF02142 MGS-like domain PMA3_RS25565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PMA3_RS25565 PF00117 Glutamine amidotransferase class-I PMA3_RS25570 PF01113 Dihydrodipicolinate reductase, N-terminus PMA3_RS25570 PF05173 Dihydrodipicolinate reductase, C-terminus PMA3_RS25575 PF01556 DnaJ C terminal domain PMA3_RS25575 PF00684 DnaJ central domain PMA3_RS25575 PF00226 DnaJ domain PMA3_RS25580 PF00012 Hsp70 protein PMA3_RS25585 PF01025 GrpE PMA3_RS25590 PF02463 RecF/RecN/SMC N terminal domain PMA3_RS25595 PF01475 Ferric uptake regulator family PMA3_RS25600 PF04355 SmpA / OmlA family PMA3_RS25605 PF03658 RnfH family Ubiquitin PMA3_RS25610 PF03364 Polyketide cyclase / dehydrase and lipid transport PMA3_RS25615 PF00209 Sodium:neurotransmitter symporter family PMA3_RS25620 PF01668 SmpB protein PMA3_RS25625 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS25625 PF07729 FCD domain PMA3_RS25630 PF02652 L-lactate permease PMA3_RS25635 PF02754 Cysteine-rich domain PMA3_RS25640 PF13183 4Fe-4S dicluster domain PMA3_RS25640 PF11870 Domain of unknown function (DUF3390) PMA3_RS25640 PF02589 LUD domain PMA3_RS25645 PF02589 LUD domain PMA3_RS25670 PF00589 Phage integrase family PMA3_RS25670 PF13356 Arm DNA-binding domain PMA3_RS25685 PF00072 Response regulator receiver domain PMA3_RS25685 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS25690 PF05721 Phytanoyl-CoA dioxygenase (PhyH) PMA3_RS25695 PF13148 Protein of unknown function (DUF3987) PMA3_RS25780 PF06745 KaiC PMA3_RS25785 PF16736 Single Cache-like PMA3_RS25785 PF00989 PAS fold PMA3_RS25785 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS25785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS25805 PF00672 HAMP domain PMA3_RS25805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS25805 PF16591 Helical bimodular sensor domain PMA3_RS25825 PF01740 STAS domain PMA3_RS25825 PF00916 Sulfate permease family PMA3_RS25835 PF03466 LysR substrate binding domain PMA3_RS25835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS25840 PF02525 Flavodoxin-like fold PMA3_RS25855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS25855 PF03466 LysR substrate binding domain PMA3_RS25860 PF02525 Flavodoxin-like fold PMA3_RS25865 PF13411 MerR HTH family regulatory protein PMA3_RS25875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PMA3_RS25875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PMA3_RS25880 PF00171 Aldehyde dehydrogenase family PMA3_RS25885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS25885 PF03466 LysR substrate binding domain PMA3_RS25890 PF13538 UvrD-like helicase C-terminal domain PMA3_RS25895 PF13361 UvrD-like helicase C-terminal domain PMA3_RS25895 PF12705 PD-(D/E)XK nuclease superfamily PMA3_RS25895 PF00580 UvrD/REP helicase N-terminal domain PMA3_RS25900 PF17946 RecC C-terminal domain PMA3_RS25930 PF00171 Aldehyde dehydrogenase family PMA3_RS25935 PF00202 Aminotransferase class-III PMA3_RS25940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS25940 PF03466 LysR substrate binding domain PMA3_RS25945 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS25945 PF08362 YcdC-like protein, C-terminal region PMA3_RS25950 PF01205 Uncharacterized protein family UPF0029 PMA3_RS25960 PF01979 Amidohydrolase family PMA3_RS26050 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS26050 PF00563 EAL domain PMA3_RS26050 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS26060 PF12833 Helix-turn-helix domain PMA3_RS26060 PF12852 Cupin PMA3_RS26085 PF00144 Beta-lactamase PMA3_RS26115 PF01235 Sodium:alanine symporter family PMA3_RS26120 PF00561 alpha/beta hydrolase fold PMA3_RS26120 PF00364 Biotin-requiring enzyme PMA3_RS26125 PF03466 LysR substrate binding domain PMA3_RS26125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS26135 PF00180 Isocitrate/isopropylmalate dehydrogenase PMA3_RS26135 PF03737 Aldolase/RraA PMA3_RS26140 PF03737 Aldolase/RraA PMA3_RS26145 PF00155 Aminotransferase class I and II PMA3_RS26170 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PMA3_RS26170 PF12833 Helix-turn-helix domain PMA3_RS26245 PF00672 HAMP domain PMA3_RS26245 PF17200 Single Cache domain 2 PMA3_RS26245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS26250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS26250 PF03466 LysR substrate binding domain PMA3_RS26255 PF07690 Major Facilitator Superfamily PMA3_RS26260 PF03573 outer membrane porin, OprD family PMA3_RS26265 PF14525 AraC-binding-like domain PMA3_RS26265 PF12833 Helix-turn-helix domain PMA3_RS26270 PF13378 Enolase C-terminal domain-like PMA3_RS26270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PMA3_RS26275 PF01070 FMN-dependent dehydrogenase PMA3_RS26280 PF00205 Thiamine pyrophosphate enzyme, central domain PMA3_RS26280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PMA3_RS26280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PMA3_RS26285 PF01425 Amidase PMA3_RS26290 PF00171 Aldehyde dehydrogenase family PMA3_RS26295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS26310 PF00111 2Fe-2S iron-sulfur cluster binding domain PMA3_RS26330 PF01522 Polysaccharide deacetylase PMA3_RS26345 PF00120 Glutamine synthetase, catalytic domain PMA3_RS26350 PF01266 FAD dependent oxidoreductase PMA3_RS26355 PF07722 Peptidase C26 PMA3_RS26360 PF00171 Aldehyde dehydrogenase family PMA3_RS26370 PF00171 Aldehyde dehydrogenase family PMA3_RS26375 PF00742 Homoserine dehydrogenase PMA3_RS26375 PF03447 Homoserine dehydrogenase, NAD binding domain PMA3_RS26380 PF01037 Lrp/AsnC ligand binding domain PMA3_RS26385 PF14821 Threonine synthase N terminus PMA3_RS26385 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS26390 PF03466 LysR substrate binding domain PMA3_RS26390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS26395 PF00324 Amino acid permease PMA3_RS26400 PF01053 Cys/Met metabolism PLP-dependent enzyme PMA3_RS26415 PF02646 RmuC family PMA3_RS26420 PF00271 Helicase conserved C-terminal domain PMA3_RS26420 PF00176 SNF2 family N-terminal domain PMA3_RS26455 PF11799 impB/mucB/samB family C-terminal domain PMA3_RS26455 PF00817 impB/mucB/samB family PMA3_RS26455 PF13438 Domain of unknown function (DUF4113) PMA3_RS26480 PF05661 Protein of unknown function (DUF808) PMA3_RS26485 PF01699 Sodium/calcium exchanger protein PMA3_RS26490 PF00962 Adenosine/AMP deaminase PMA3_RS26505 PF00107 Zinc-binding dehydrogenase PMA3_RS26505 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS26510 PF07690 Major Facilitator Superfamily PMA3_RS26525 PF00403 Heavy-metal-associated domain PMA3_RS26530 PF00376 MerR family regulatory protein PMA3_RS26530 PF09278 MerR, DNA binding PMA3_RS26545 PF13406 Transglycosylase SLT domain PMA3_RS26550 PF17676 LD-carboxypeptidase C-terminal domain PMA3_RS26550 PF02016 LD-carboxypeptidase N-terminal domain PMA3_RS26555 PF04055 Radical SAM superfamily PMA3_RS26555 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PMA3_RS26560 PF03099 Biotin/lipoate A/B protein ligase family PMA3_RS26565 PF04359 Protein of unknown function (DUF493) PMA3_RS26570 PF00768 D-alanyl-D-alanine carboxypeptidase PMA3_RS26570 PF07943 Penicillin-binding protein 5, C-terminal domain PMA3_RS26575 PF03330 Lytic transglycolase PMA3_RS26575 PF05036 Sporulation related domain PMA3_RS26580 PF13406 Transglycosylase SLT domain PMA3_RS26585 PF01098 Cell cycle protein PMA3_RS26590 PF00905 Penicillin binding protein transpeptidase domain PMA3_RS26590 PF03717 Penicillin-binding Protein dimerisation domain PMA3_RS26595 PF02590 Predicted SPOUT methyltransferase PMA3_RS26605 PF01467 Cytidylyltransferase-like PMA3_RS26610 PF00171 Aldehyde dehydrogenase family PMA3_RS26615 PF02245 Methylpurine-DNA glycosylase (MPG) PMA3_RS26620 PF09335 SNARE associated Golgi protein PMA3_RS26650 PF04172 LrgB-like family PMA3_RS26655 PF03788 LrgA family PMA3_RS26660 PF01575 MaoC like domain PMA3_RS26670 PF13460 NAD(P)H-binding PMA3_RS26680 PF02441 Flavoprotein PMA3_RS26685 PF01225 Mur ligase family, catalytic domain PMA3_RS26685 PF02875 Mur ligase family, glutamate ligase domain PMA3_RS26685 PF08245 Mur ligase middle domain PMA3_RS26690 PF00158 Sigma-54 interaction domain PMA3_RS26690 PF02954 Bacterial regulatory protein, Fis family PMA3_RS26690 PF01590 GAF domain PMA3_RS26695 PF00171 Aldehyde dehydrogenase family PMA3_RS26700 PF13520 Amino acid permease PMA3_RS26705 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PMA3_RS26710 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PMA3_RS26715 PF00583 Acetyltransferase (GNAT) family PMA3_RS26720 PF09335 SNARE associated Golgi protein PMA3_RS26725 PF06167 Glucose-regulated metallo-peptidase M90 PMA3_RS26730 PF00719 Inorganic pyrophosphatase PMA3_RS26735 PF01381 Helix-turn-helix PMA3_RS26735 PF00717 Peptidase S24-like PMA3_RS26750 PF13148 Protein of unknown function (DUF3987) PMA3_RS26765 PF09588 YqaJ-like viral recombinase domain PMA3_RS26775 PF04002 RadC-like JAB domain PMA3_RS26795 PF02463 RecF/RecN/SMC N terminal domain PMA3_RS26815 PF01527 Transposase PMA3_RS26820 PF13276 HTH-like domain PMA3_RS26820 PF00665 Integrase core domain PMA3_RS26830 PF08774 VRR-NUC domain PMA3_RS26830 PF04851 Type III restriction enzyme, res subunit PMA3_RS26835 PF01555 DNA methylase PMA3_RS26835 PF18273 Type III R-M EcoP15I C-terminal domain PMA3_RS26850 PF04221 RelB antitoxin PMA3_RS26855 PF05016 ParE toxin of type II toxin-antitoxin system, parDE PMA3_RS26860 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) PMA3_RS26865 PF08486 Stage II sporulation protein PMA3_RS26865 PF10062 Predicted secreted protein (DUF2300) PMA3_RS26870 PF00207 Alpha-2-macroglobulin family PMA3_RS26870 PF01835 MG2 domain PMA3_RS26870 PF07703 Alpha-2-macroglobulin bait region domain PMA3_RS26875 PF06672 Protein of unknown function (DUF1175) PMA3_RS26880 PF09909 Uncharacterized protein conserved in bacteria (DUF2138) PMA3_RS26885 PF09906 Uncharacterized protein conserved in bacteria (DUF2135) PMA3_RS26890 PF02609 Exonuclease VII small subunit PMA3_RS26895 PF00348 Polyprenyl synthetase PMA3_RS26900 PF02779 Transketolase, pyrimidine binding domain PMA3_RS26900 PF02780 Transketolase, C-terminal domain PMA3_RS26900 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PMA3_RS26905 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS26905 PF00593 TonB dependent receptor PMA3_RS26910 PF01497 Periplasmic binding protein PMA3_RS26920 PF00925 GTP cyclohydrolase II PMA3_RS26930 PF04608 Phosphatidylglycerophosphatase A PMA3_RS26935 PF02769 AIR synthase related protein, C-terminal domain PMA3_RS26935 PF00586 AIR synthase related protein, N-terminal domain PMA3_RS26940 PF01029 NusB family PMA3_RS26945 PF00885 6,7-dimethyl-8-ribityllumazine synthase PMA3_RS26950 PF00925 GTP cyclohydrolase II PMA3_RS26950 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PMA3_RS26955 PF00677 Lumazine binding domain PMA3_RS26960 PF01872 RibD C-terminal domain PMA3_RS26960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PMA3_RS26965 PF03477 ATP cone domain PMA3_RS26980 PF00085 Thioredoxin PMA3_RS26995 PF00005 ABC transporter PMA3_RS26995 PF02687 FtsX-like permease family PMA3_RS26995 PF12704 MacB-like periplasmic core domain PMA3_RS27010 PF03922 OmpW family PMA3_RS27015 PF16363 GDP-mannose 4,6 dehydratase PMA3_RS27025 PF08494 DEAD/H associated PMA3_RS27025 PF00271 Helicase conserved C-terminal domain PMA3_RS27025 PF00270 DEAD/DEAH box helicase PMA3_RS27030 PF00924 Mechanosensitive ion channel PMA3_RS27035 PF07690 Major Facilitator Superfamily PMA3_RS27045 PF03372 Endonuclease/Exonuclease/phosphatase family PMA3_RS27050 PF13091 PLD-like domain PMA3_RS27055 PF03706 Lysylphosphatidylglycerol synthase TM region PMA3_RS27070 PF12833 Helix-turn-helix domain PMA3_RS27070 PF00072 Response regulator receiver domain PMA3_RS27075 PF00857 Isochorismatase family PMA3_RS27085 PF04012 PspA/IM30 family PMA3_RS27095 PF03994 Domain of Unknown Function (DUF350) PMA3_RS27105 PF03738 Glutathionylspermidine synthase preATP-grasp PMA3_RS27110 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding PMA3_RS27110 PF18381 YcaO cyclodehydratase C-terminal domain PMA3_RS27115 PF00436 Single-strand binding protein family PMA3_RS27120 PF07690 Major Facilitator Superfamily PMA3_RS27125 PF17760 UvrA interaction domain PMA3_RS27125 PF17755 UvrA DNA-binding domain PMA3_RS27130 PF00210 Ferritin-like domain PMA3_RS27135 PF06628 Catalase-related immune-responsive PMA3_RS27135 PF00199 Catalase PMA3_RS27140 PF01196 Ribosomal protein L17 PMA3_RS27145 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PMA3_RS27145 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PMA3_RS27145 PF01000 RNA polymerase Rpb3/RpoA insert domain PMA3_RS27150 PF01479 S4 domain PMA3_RS27150 PF00163 Ribosomal protein S4/S9 N-terminal domain PMA3_RS27155 PF00411 Ribosomal protein S11 PMA3_RS27160 PF00416 Ribosomal protein S13/S18 PMA3_RS27165 PF00344 SecY translocase PMA3_RS27170 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PMA3_RS27175 PF00327 Ribosomal protein L30p/L7e PMA3_RS27180 PF00333 Ribosomal protein S5, N-terminal domain PMA3_RS27180 PF03719 Ribosomal protein S5, C-terminal domain PMA3_RS27185 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PMA3_RS27190 PF00347 Ribosomal protein L6 PMA3_RS27195 PF00410 Ribosomal protein S8 PMA3_RS27200 PF00253 Ribosomal protein S14p/S29e PMA3_RS27205 PF00673 ribosomal L5P family C-terminus PMA3_RS27205 PF00281 Ribosomal protein L5 PMA3_RS27210 PF00467 KOW motif PMA3_RS27210 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PMA3_RS27215 PF00238 Ribosomal protein L14p/L23e PMA3_RS27220 PF00366 Ribosomal protein S17 PMA3_RS27225 PF00831 Ribosomal L29 protein PMA3_RS27230 PF00252 Ribosomal protein L16p/L10e PMA3_RS27235 PF00189 Ribosomal protein S3, C-terminal domain PMA3_RS27235 PF07650 KH domain PMA3_RS27240 PF00237 Ribosomal protein L22p/L17e PMA3_RS27245 PF00203 Ribosomal protein S19 PMA3_RS27250 PF00181 Ribosomal Proteins L2, RNA binding domain PMA3_RS27250 PF03947 Ribosomal Proteins L2, C-terminal domain PMA3_RS27255 PF00276 Ribosomal protein L23 PMA3_RS27260 PF00573 Ribosomal protein L4/L1 family PMA3_RS27265 PF00297 Ribosomal protein L3 PMA3_RS27270 PF00338 Ribosomal protein S10p/S20e PMA3_RS27275 PF03143 Elongation factor Tu C-terminal domain PMA3_RS27275 PF03144 Elongation factor Tu domain 2 PMA3_RS27275 PF00009 Elongation factor Tu GTP binding domain PMA3_RS27280 PF03144 Elongation factor Tu domain 2 PMA3_RS27280 PF00009 Elongation factor Tu GTP binding domain PMA3_RS27280 PF03764 Elongation factor G, domain IV PMA3_RS27280 PF14492 Elongation Factor G, domain II PMA3_RS27280 PF00679 Elongation factor G C-terminus PMA3_RS27285 PF00177 Ribosomal protein S7p/S5e PMA3_RS27290 PF00164 Ribosomal protein S12/S23 PMA3_RS27295 PF05000 RNA polymerase Rpb1, domain 4 PMA3_RS27295 PF04998 RNA polymerase Rpb1, domain 5 PMA3_RS27295 PF04983 RNA polymerase Rpb1, domain 3 PMA3_RS27295 PF00623 RNA polymerase Rpb1, domain 2 PMA3_RS27295 PF04997 RNA polymerase Rpb1, domain 1 PMA3_RS27300 PF10385 RNA polymerase beta subunit external 1 domain PMA3_RS27300 PF04565 RNA polymerase Rpb2, domain 3 PMA3_RS27300 PF04561 RNA polymerase Rpb2, domain 2 PMA3_RS27300 PF00562 RNA polymerase Rpb2, domain 6 PMA3_RS27300 PF04560 RNA polymerase Rpb2, domain 7 PMA3_RS27300 PF04563 RNA polymerase beta subunit PMA3_RS27305 PF16320 Ribosomal protein L7/L12 dimerisation domain PMA3_RS27305 PF00542 Ribosomal protein L7/L12 C-terminal domain PMA3_RS27310 PF00466 Ribosomal protein L10 PMA3_RS27315 PF00687 Ribosomal protein L1p/L10e family PMA3_RS27320 PF03946 Ribosomal protein L11, N-terminal domain PMA3_RS27320 PF00298 Ribosomal protein L11, RNA binding domain PMA3_RS27325 PF00467 KOW motif PMA3_RS27325 PF02357 Transcription termination factor nusG PMA3_RS27330 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PMA3_RS27360 PF03309 Type III pantothenate kinase PMA3_RS27365 PF08279 HTH domain PMA3_RS27365 PF03099 Biotin/lipoate A/B protein ligase family PMA3_RS27365 PF02237 Biotin protein ligase C terminal domain PMA3_RS27395 PF00579 tRNA synthetases class I (W and Y) PMA3_RS27395 PF01479 S4 domain PMA3_RS27400 PF04225 Opacity-associated protein A LysM-like domain PMA3_RS27400 PF01551 Peptidase family M23 PMA3_RS27405 PF03702 Anhydro-N-acetylmuramic acid kinase PMA3_RS27410 PF01521 Iron-sulphur cluster biosynthesis PMA3_RS27415 PF01118 Semialdehyde dehydrogenase, NAD binding domain PMA3_RS27415 PF02774 Semialdehyde dehydrogenase, dimerisation domain PMA3_RS27420 PF03653 Uncharacterised protein family (UPF0093) PMA3_RS27435 PF00106 short chain dehydrogenase PMA3_RS27440 PF01230 HIT domain PMA3_RS27445 PF03232 Ubiquinone biosynthesis protein COQ7 PMA3_RS27450 PF02566 OsmC-like protein PMA3_RS27455 PF00027 Cyclic nucleotide-binding domain PMA3_RS27455 PF13545 Crp-like helix-turn-helix domain PMA3_RS27465 PF00218 Indole-3-glycerol phosphate synthase PMA3_RS27470 PF02885 Glycosyl transferase family, helical bundle domain PMA3_RS27470 PF00591 Glycosyl transferase family, a/b domain PMA3_RS27475 PF00117 Glutamine amidotransferase class-I PMA3_RS27480 PF03797 Autotransporter beta-domain PMA3_RS27480 PF00657 GDSL-like Lipase/Acylhydrolase PMA3_RS27485 PF00425 chorismate binding enzyme PMA3_RS27485 PF04715 Anthranilate synthase component I, N terminal region PMA3_RS27490 PF13419 Haloacid dehalogenase-like hydrolase PMA3_RS27495 PF00834 Ribulose-phosphate 3 epimerase family PMA3_RS27500 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS27505 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS27515 PF00005 ABC transporter PMA3_RS27515 PF08402 TOBE domain PMA3_RS27520 PF00196 Bacterial regulatory proteins, luxR family PMA3_RS27520 PF00072 Response regulator receiver domain PMA3_RS27525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS27525 PF07730 Histidine kinase PMA3_RS27525 PF05384 Sensor protein DegS PMA3_RS27535 PF05099 Tellurite resistance protein TerB PMA3_RS27535 PF00226 DnaJ domain PMA3_RS27540 PF00483 Nucleotidyl transferase PMA3_RS27545 PF01636 Phosphotransferase enzyme family PMA3_RS27550 PF04453 LPS transport system D PMA3_RS27550 PF03968 OstA-like protein PMA3_RS27555 PF00639 PPIC-type PPIASE domain PMA3_RS27555 PF09312 SurA N-terminal domain PMA3_RS27560 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PMA3_RS27565 PF00398 Ribosomal RNA adenine dimethylase PMA3_RS27570 PF04379 ApaG domain PMA3_RS27575 PF00149 Calcineurin-like phosphoesterase PMA3_RS27580 PF00581 Rhodanese-like domain PMA3_RS27585 PF08298 PrkA AAA domain PMA3_RS27585 PF06798 PrkA serine protein kinase C-terminal domain PMA3_RS27590 PF04285 Protein of unknown function (DUF444) PMA3_RS27595 PF04293 SpoVR like protein PMA3_RS27600 PF01743 Poly A polymerase head domain PMA3_RS27600 PF12627 Probable RNA and SrmB- binding site of polymerase A PMA3_RS27600 PF01966 HD domain PMA3_RS27610 PF02152 Dihydroneopterin aldolase PMA3_RS27615 PF02660 Glycerol-3-phosphate acyltransferase PMA3_RS27620 PF00814 Glycoprotease family PMA3_RS27625 PF01165 Ribosomal protein S21 PMA3_RS27630 PF01807 CHC2 zinc finger PMA3_RS27630 PF13662 Toprim domain PMA3_RS27630 PF08278 DNA primase DnaG DnaB-binding PMA3_RS27630 PF10410 DnaB-helicase binding domain of primase PMA3_RS27630 PF08275 DNA primase catalytic core, N-terminal domain PMA3_RS27635 PF04546 Sigma-70, non-essential region PMA3_RS27635 PF03979 Sigma-70 factor, region 1.1 PMA3_RS27635 PF00140 Sigma-70 factor, region 1.2 PMA3_RS27635 PF04542 Sigma-70 region 2 PMA3_RS27635 PF04539 Sigma-70 region 3 PMA3_RS27635 PF04545 Sigma-70, region 4 PMA3_RS27640 PF00563 EAL domain PMA3_RS27640 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS27640 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS27660 PF02384 N-6 DNA Methylase PMA3_RS27660 PF12161 HsdM N-terminal domain PMA3_RS27690 PF13360 PQQ-like domain PMA3_RS27690 PF01011 PQQ enzyme repeat PMA3_RS27700 PF01593 Flavin containing amine oxidoreductase PMA3_RS27705 PF00795 Carbon-nitrogen hydrolase PMA3_RS27710 PF05193 Peptidase M16 inactive domain PMA3_RS27710 PF00675 Insulinase (Peptidase family M16) PMA3_RS27715 PF12706 Beta-lactamase superfamily domain PMA3_RS27720 PF03070 TENA/THI-4/PQQC family PMA3_RS27725 PF05402 Coenzyme PQQ synthesis protein D (PqqD) PMA3_RS27730 PF13186 Iron-sulfur cluster-binding domain PMA3_RS27730 PF04055 Radical SAM superfamily PMA3_RS27740 PF01679 Proteolipid membrane potential modulator PMA3_RS27745 PF00202 Aminotransferase class-III PMA3_RS27750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS27750 PF03466 LysR substrate binding domain PMA3_RS27755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS27755 PF12806 Acetyl-CoA dehydrogenase C-terminal like PMA3_RS27755 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS27755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS27760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS27760 PF12806 Acetyl-CoA dehydrogenase C-terminal like PMA3_RS27760 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS27760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS27765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PMA3_RS27765 PF02770 Acyl-CoA dehydrogenase, middle domain PMA3_RS27765 PF12806 Acetyl-CoA dehydrogenase C-terminal like PMA3_RS27765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PMA3_RS27775 PF08241 Methyltransferase domain PMA3_RS27780 PF08241 Methyltransferase domain PMA3_RS27780 PF12697 Alpha/beta hydrolase family PMA3_RS27785 PF00155 Aminotransferase class I and II PMA3_RS27790 PF04055 Radical SAM superfamily PMA3_RS27790 PF06968 Biotin and Thiamin Synthesis associated domain PMA3_RS27795 PF00156 Phosphoribosyl transferase domain PMA3_RS27805 PF03459 TOBE domain PMA3_RS27805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS27815 PF01636 Phosphotransferase enzyme family PMA3_RS27820 PF00892 EamA-like transporter family PMA3_RS27830 PF01274 Malate synthase PMA3_RS27835 PF00072 Response regulator receiver domain PMA3_RS27835 PF00158 Sigma-54 interaction domain PMA3_RS27845 PF11490 DNA polymerase III polC-type N-terminus II PMA3_RS27845 PF02811 PHP domain PMA3_RS27845 PF14579 Helix-hairpin-helix motif PMA3_RS27845 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PMA3_RS27845 PF00929 Exonuclease PMA3_RS27845 PF07733 Bacterial DNA polymerase III alpha NTPase domain PMA3_RS27850 PF04542 Sigma-70 region 2 PMA3_RS27850 PF08281 Sigma-70, region 4 PMA3_RS27855 PF16220 Domain of unknown function (DUF4880) PMA3_RS27855 PF04773 FecR protein PMA3_RS27860 PF00593 TonB dependent receptor PMA3_RS27860 PF07715 TonB-dependent Receptor Plug Domain PMA3_RS27875 PF13417 Glutathione S-transferase, N-terminal domain PMA3_RS27875 PF00043 Glutathione S-transferase, C-terminal domain PMA3_RS27890 PF08443 RimK-like ATP-grasp domain PMA3_RS27890 PF18030 RimK PreATP-grasp domain PMA3_RS27895 PF13276 HTH-like domain PMA3_RS27895 PF00665 Integrase core domain PMA3_RS27900 PF01527 Transposase PMA3_RS27905 PF01553 Acyltransferase PMA3_RS27920 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS27920 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PMA3_RS27925 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PMA3_RS27925 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS27935 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS27935 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PMA3_RS27940 PF00551 Formyl transferase PMA3_RS27950 PF01571 Aminomethyltransferase folate-binding domain PMA3_RS27950 PF08669 Glycine cleavage T-protein C-terminal barrel domain PMA3_RS27950 PF17806 Sarcosine oxidase A3 domain PMA3_RS27950 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS27960 PF01266 FAD dependent oxidoreductase PMA3_RS27965 PF00464 Serine hydroxymethyltransferase PMA3_RS27975 PF01212 Beta-eliminating lyase PMA3_RS27980 PF00106 short chain dehydrogenase PMA3_RS27985 PF00042 Globin PMA3_RS27985 PF00175 Oxidoreductase NAD-binding domain PMA3_RS27985 PF00970 Oxidoreductase FAD-binding domain PMA3_RS27990 PF00355 Rieske [2Fe-2S] domain PMA3_RS27990 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PMA3_RS28005 PF00766 Electron transfer flavoprotein FAD-binding domain PMA3_RS28005 PF01012 Electron transfer flavoprotein domain PMA3_RS28010 PF02665 Nitrate reductase gamma subunit PMA3_RS28010 PF13183 4Fe-4S dicluster domain PMA3_RS28010 PF02754 Cysteine-rich domain PMA3_RS28015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PMA3_RS28040 PF00264 Common central domain of tyrosinase PMA3_RS28050 PF01965 DJ-1/PfpI family PMA3_RS28050 PF12833 Helix-turn-helix domain PMA3_RS28060 PF05853 beta-keto acid cleavage enzyme PMA3_RS28065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PMA3_RS28065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PMA3_RS28075 PF06155 Protein of unknown function (DUF971) PMA3_RS28075 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PMA3_RS28085 PF12833 Helix-turn-helix domain PMA3_RS28085 PF01965 DJ-1/PfpI family PMA3_RS28090 PF03313 Serine dehydratase alpha chain PMA3_RS28090 PF03315 Serine dehydratase beta chain PMA3_RS28095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PMA3_RS28100 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS28105 PF00571 CBS domain PMA3_RS28105 PF00005 ABC transporter PMA3_RS28115 PF02028 BCCT, betaine/carnitine/choline family transporter PMA3_RS28120 PF00440 Bacterial regulatory proteins, tetR family PMA3_RS28120 PF13977 BetI-type transcriptional repressor, C-terminal PMA3_RS28125 PF00171 Aldehyde dehydrogenase family PMA3_RS28130 PF05199 GMC oxidoreductase PMA3_RS28130 PF00732 GMC oxidoreductase PMA3_RS28140 PF01523 Putative modulator of DNA gyrase PMA3_RS28145 PF07690 Major Facilitator Superfamily PMA3_RS28150 PF00271 Helicase conserved C-terminal domain PMA3_RS28150 PF03880 DbpA RNA binding domain PMA3_RS28150 PF00270 DEAD/DEAH box helicase PMA3_RS28160 PF12805 FUSC-like inner membrane protein yccS PMA3_RS28165 PF13673 Acetyltransferase (GNAT) domain PMA3_RS28175 PF01863 Protein of unknown function DUF45 PMA3_RS28180 PF00563 EAL domain PMA3_RS28180 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS28180 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS28190 PF01116 Fructose-bisphosphate aldolase class-II PMA3_RS28205 PF00162 Phosphoglycerate kinase PMA3_RS28210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PMA3_RS28210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PMA3_RS28215 PF00456 Transketolase, thiamine diphosphate binding domain PMA3_RS28215 PF02779 Transketolase, pyrimidine binding domain PMA3_RS28215 PF02780 Transketolase, C-terminal domain PMA3_RS28220 PF13649 Methyltransferase domain PMA3_RS28225 PF00438 S-adenosylmethionine synthetase, N-terminal domain PMA3_RS28225 PF02773 S-adenosylmethionine synthetase, C-terminal domain PMA3_RS28225 PF02772 S-adenosylmethionine synthetase, central domain PMA3_RS28230 PF03120 NAD-dependent DNA ligase OB-fold domain PMA3_RS28230 PF01653 NAD-dependent DNA ligase adenylation domain PMA3_RS28235 PF06476 Protein of unknown function (DUF1090) PMA3_RS28260 PF07690 Major Facilitator Superfamily PMA3_RS28265 PF01226 Formate/nitrite transporter PMA3_RS28275 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PMA3_RS28275 PF05221 S-adenosyl-L-homocysteine hydrolase PMA3_RS28280 PF02219 Methylenetetrahydrofolate reductase PMA3_RS28290 PF00270 DEAD/DEAH box helicase PMA3_RS28290 PF00271 Helicase conserved C-terminal domain PMA3_RS28295 PF04264 YceI-like domain PMA3_RS28300 PF01292 Prokaryotic cytochrome b561 PMA3_RS28305 PF01593 Flavin containing amine oxidoreductase PMA3_RS28310 PF00202 Aminotransferase class-III PMA3_RS28315 PF04452 RNA methyltransferase PMA3_RS28320 PF03006 Haemolysin-III related PMA3_RS28325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS28325 PF03466 LysR substrate binding domain PMA3_RS28340 PF02801 Beta-ketoacyl synthase, C-terminal domain PMA3_RS28340 PF00109 Beta-ketoacyl synthase, N-terminal domain PMA3_RS28340 PF16197 Ketoacyl-synthetase C-terminal extension PMA3_RS28340 PF00698 Acyl transferase domain PMA3_RS28340 PF08659 KR domain PMA3_RS28340 PF00550 Phosphopantetheine attachment site PMA3_RS28345 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG PMA3_RS28355 PF01039 Carboxyl transferase domain PMA3_RS28360 PF06857 Malonate decarboxylase delta subunit (MdcD) PMA3_RS28365 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase PMA3_RS28370 PF16957 Malonate decarboxylase, alpha subunit, transporter PMA3_RS28395 PF02895 Signal transducing histidine kinase, homodimeric domain PMA3_RS28395 PF00072 Response regulator receiver domain PMA3_RS28395 PF01627 Hpt domain PMA3_RS28395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS28395 PF01584 CheW-like domain PMA3_RS28405 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term PMA3_RS28405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PMA3_RS28410 PF01584 CheW-like domain PMA3_RS28415 PF00072 Response regulator receiver domain PMA3_RS28420 PF00072 Response regulator receiver domain PMA3_RS28425 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PMA3_RS28425 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PMA3_RS28435 PF02622 Uncharacterized ACR, COG1678 PMA3_RS28440 PF03652 Holliday junction resolvase PMA3_RS28445 PF00156 Phosphoribosyl transferase domain PMA3_RS28450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PMA3_RS28450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PMA3_RS28455 PF01979 Amidohydrolase family PMA3_RS28465 PF00877 NlpC/P60 family PMA3_RS28470 PF00437 Type II/IV secretion system protein PMA3_RS28475 PF01168 Alanine racemase, N-terminal domain PMA3_RS28480 PF14748 Pyrroline-5-carboxylate reductase dimerisation PMA3_RS28480 PF03807 NADP oxidoreductase coenzyme F420-dependent PMA3_RS28485 PF02325 YGGT family PMA3_RS28490 PF00561 alpha/beta hydrolase fold PMA3_RS28495 PF07021 Methionine biosynthesis protein MetW PMA3_RS28495 PF00561 alpha/beta hydrolase fold PMA3_RS28505 PF01725 Ham1 family PMA3_RS28510 PF04055 Radical SAM superfamily PMA3_RS28510 PF06969 HemN C-terminal domain PMA3_RS28520 PF02390 Putative methyltransferase PMA3_RS28525 PF05690 Thiazole biosynthesis protein ThiG PMA3_RS28530 PF05690 Thiazole biosynthesis protein ThiG PMA3_RS28530 PF02597 ThiS family PMA3_RS28535 PF04241 Protein of unknown function (DUF423) PMA3_RS28540 PF00912 Transglycosylase PMA3_RS28545 PF04545 Sigma-70, region 4 PMA3_RS28545 PF00140 Sigma-70 factor, region 1.2 PMA3_RS28545 PF04542 Sigma-70 region 2 PMA3_RS28550 PF18075 FtsX extracellular domain PMA3_RS28555 PF00005 ABC transporter PMA3_RS28560 PF00448 SRP54-type protein, GTPase domain PMA3_RS28560 PF02881 SRP54-type protein, helical bundle domain PMA3_RS28565 PF05193 Peptidase M16 inactive domain PMA3_RS28565 PF00675 Insulinase (Peptidase family M16) PMA3_RS28570 PF05193 Peptidase M16 inactive domain PMA3_RS28590 PF00561 alpha/beta hydrolase fold PMA3_RS28595 PF02311 AraC-like ligand binding domain PMA3_RS28595 PF12833 Helix-turn-helix domain PMA3_RS28600 PF00581 Rhodanese-like domain PMA3_RS28610 PF00171 Aldehyde dehydrogenase family PMA3_RS28620 PF05199 GMC oxidoreductase PMA3_RS28620 PF00732 GMC oxidoreductase PMA3_RS28625 PF01467 Cytidylyltransferase-like PMA3_RS28630 PF00037 4Fe-4S binding domain PMA3_RS28640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PMA3_RS28640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PMA3_RS28640 PF06827 Zinc finger found in FPG and IleRS PMA3_RS28650 PF10672 S-adenosylmethionine-dependent methyltransferase PMA3_RS28650 PF17785 PUA-like domain PMA3_RS28655 PF07690 Major Facilitator Superfamily PMA3_RS28660 PF00920 Dehydratase family PMA3_RS28680 PF00375 Sodium:dicarboxylate symporter family PMA3_RS28685 PF00186 Dihydrofolate reductase PMA3_RS28695 PF01926 50S ribosome-binding GTPase PMA3_RS28695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PMA3_RS28705 PF01966 HD domain PMA3_RS28715 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS28720 PF08402 TOBE domain PMA3_RS28720 PF00005 ABC transporter PMA3_RS28725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS28725 PF03466 LysR substrate binding domain PMA3_RS28730 PF00403 Heavy-metal-associated domain PMA3_RS28735 PF13411 MerR HTH family regulatory protein PMA3_RS28740 PF00303 Thymidylate synthase PMA3_RS28745 PF01790 Prolipoprotein diacylglyceryl transferase PMA3_RS28750 PF01925 Sulfite exporter TauE/SafE PMA3_RS28760 PF00391 PEP-utilising enzyme, mobile domain PMA3_RS28760 PF01590 GAF domain PMA3_RS28760 PF02896 PEP-utilising enzyme, TIM barrel domain PMA3_RS28760 PF05524 PEP-utilising enzyme, N-terminal PMA3_RS28765 PF00293 NUDIX domain PMA3_RS28780 PF00291 Pyridoxal-phosphate dependent enzyme PMA3_RS28780 PF00585 C-terminal regulatory domain of Threonine dehydratase PMA3_RS28785 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PMA3_RS28790 PF06977 SdiA-regulated PMA3_RS28795 PF06977 SdiA-regulated PMA3_RS28800 PF01557 Fumarylacetoacetate (FAA) hydrolase family PMA3_RS28805 PF02913 FAD linked oxidases, C-terminal domain PMA3_RS28805 PF01565 FAD binding domain PMA3_RS28810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PMA3_RS28810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PMA3_RS28810 PF01842 ACT domain PMA3_RS28820 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS28825 PF04463 Protein of unknown function (DUF523) PMA3_RS28850 PF01804 Penicillin amidase PMA3_RS28855 PF01965 DJ-1/PfpI family PMA3_RS28865 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS28870 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS28875 PF00005 ABC transporter PMA3_RS28875 PF08402 TOBE domain PMA3_RS28880 PF13416 Bacterial extracellular solute-binding protein PMA3_RS28885 PF13416 Bacterial extracellular solute-binding protein PMA3_RS28890 PF00202 Aminotransferase class-III PMA3_RS28895 PF00120 Glutamine synthetase, catalytic domain PMA3_RS28905 PF00120 Glutamine synthetase, catalytic domain PMA3_RS28915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS28915 PF03459 TOBE domain PMA3_RS28920 PF00005 ABC transporter PMA3_RS28925 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS28930 PF00296 Luciferase-like monooxygenase PMA3_RS28935 PF09084 NMT1/THI5 like PMA3_RS28940 PF03358 NADPH-dependent FMN reductase PMA3_RS28945 PF10417 C-terminal domain of 1-Cys peroxiredoxin PMA3_RS28945 PF00578 AhpC/TSA family PMA3_RS28950 PF03573 outer membrane porin, OprD family PMA3_RS28955 PF03573 outer membrane porin, OprD family PMA3_RS28965 PF00696 Amino acid kinase family PMA3_RS28965 PF00583 Acetyltransferase (GNAT) family PMA3_RS28970 PF07687 Peptidase dimerisation domain PMA3_RS28970 PF01546 Peptidase family M20/M25/M40 PMA3_RS28980 PF01037 Lrp/AsnC ligand binding domain PMA3_RS28980 PF13404 AsnC-type helix-turn-helix domain PMA3_RS28990 PF00437 Type II/IV secretion system protein PMA3_RS28990 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PMA3_RS29000 PF02347 Glycine cleavage system P-protein PMA3_RS29005 PF01597 Glycine cleavage H-protein PMA3_RS29010 PF01571 Aminomethyltransferase folate-binding domain PMA3_RS29010 PF08669 Glycine cleavage T-protein C-terminal barrel domain PMA3_RS29015 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS29025 PF01494 FAD binding domain PMA3_RS29030 PF01494 FAD binding domain PMA3_RS29035 PF05195 Aminopeptidase P, N-terminal domain PMA3_RS29035 PF00557 Metallopeptidase family M24 PMA3_RS29040 PF03695 Uncharacterised protein family (UPF0149) PMA3_RS29050 PF05164 Cell division protein ZapA PMA3_RS29060 PF01812 5-formyltetrahydrofolate cyclo-ligase family PMA3_RS29075 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS29075 PF00107 Zinc-binding dehydrogenase PMA3_RS29085 PF07690 Major Facilitator Superfamily PMA3_RS29095 PF00175 Oxidoreductase NAD-binding domain PMA3_RS29100 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PMA3_RS29105 PF07497 Rho termination factor, RNA-binding domain PMA3_RS29105 PF07498 Rho termination factor, N-terminal domain PMA3_RS29105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PMA3_RS29110 PF00085 Thioredoxin PMA3_RS29115 PF07729 FCD domain PMA3_RS29115 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS29120 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS29125 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS29130 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS29135 PF00005 ABC transporter PMA3_RS29140 PF02541 Ppx/GppA phosphatase family PMA3_RS29145 PF02503 Polyphosphate kinase middle domain PMA3_RS29145 PF17941 Polyphosphate kinase C-terminal domain 1 PMA3_RS29145 PF13089 Polyphosphate kinase N-terminal domain PMA3_RS29145 PF13090 Polyphosphate kinase C-terminal domain 2 PMA3_RS29150 PF00490 Delta-aminolevulinic acid dehydratase PMA3_RS29155 PF09335 SNARE associated Golgi protein PMA3_RS29160 PF04116 Fatty acid hydroxylase superfamily PMA3_RS29170 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PMA3_RS29175 PF03239 Iron permease FTR1 family PMA3_RS29180 PF01810 LysE type translocator PMA3_RS29190 PF00005 ABC transporter PMA3_RS29190 PF12848 ABC transporter PMA3_RS29205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PMA3_RS29205 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PMA3_RS29210 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ PMA3_RS29215 PF02600 Disulfide bond formation protein DsbB PMA3_RS29230 PF02602 Uroporphyrinogen-III synthase HemD PMA3_RS29235 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PMA3_RS29235 PF03900 Porphobilinogen deaminase, C-terminal domain PMA3_RS29240 PF04397 LytTr DNA-binding domain PMA3_RS29240 PF00072 Response regulator receiver domain PMA3_RS29245 PF00206 Lyase PMA3_RS29245 PF14698 Argininosuccinate lyase C-terminal PMA3_RS29250 PF14497 Glutathione S-transferase, C-terminal domain PMA3_RS29250 PF13417 Glutathione S-transferase, N-terminal domain PMA3_RS29265 PF12633 Adenylate cyclase NT domain PMA3_RS29265 PF01295 Adenylate cyclase, class-I PMA3_RS29270 PF01272 Transcription elongation factor, GreA/GreB, C-term PMA3_RS29270 PF14760 Rnk N-terminus PMA3_RS29275 PF01491 Frataxin-like domain PMA3_RS29280 PF13627 Prokaryotic lipoprotein-attachment site PMA3_RS29285 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PMA3_RS29285 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PMA3_RS29290 PF01678 Diaminopimelate epimerase PMA3_RS29300 PF00589 Phage integrase family PMA3_RS29300 PF02899 Phage integrase, N-terminal SAM-like domain PMA3_RS29305 PF13419 Haloacid dehalogenase-like hydrolase PMA3_RS29315 PF01894 Uncharacterised protein family UPF0047 PMA3_RS29320 PF00909 Ammonium Transporter Family PMA3_RS29325 PF00543 Nitrogen regulatory protein P-II PMA3_RS29330 PF04380 Membrane fusogenic activity PMA3_RS29340 PF01381 Helix-turn-helix PMA3_RS29345 PF01078 Magnesium chelatase, subunit ChlI PMA3_RS29345 PF13335 Magnesium chelatase, subunit ChlI C-terminal PMA3_RS29350 PF00082 Subtilase family PMA3_RS29355 PF00004 ATPase family associated with various cellular activities (AAA) PMA3_RS29360 PF13335 Magnesium chelatase, subunit ChlI C-terminal PMA3_RS29360 PF01078 Magnesium chelatase, subunit ChlI PMA3_RS29370 PF03466 LysR substrate binding domain PMA3_RS29370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS29375 PF01554 MatE PMA3_RS29380 PF00563 EAL domain PMA3_RS29380 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS29380 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS29385 PF13361 UvrD-like helicase C-terminal domain PMA3_RS29385 PF00580 UvrD/REP helicase N-terminal domain PMA3_RS29390 PF00156 Phosphoribosyl transferase domain PMA3_RS29395 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PMA3_RS29395 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PMA3_RS29400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PMA3_RS29410 PF01168 Alanine racemase, N-terminal domain PMA3_RS29410 PF00842 Alanine racemase, C-terminal domain PMA3_RS29415 PF01042 Endoribonuclease L-PSP PMA3_RS29420 PF01266 FAD dependent oxidoreductase PMA3_RS29425 PF01037 Lrp/AsnC ligand binding domain PMA3_RS29435 PF01266 FAD dependent oxidoreductase PMA3_RS29445 PF00155 Aminotransferase class I and II PMA3_RS29445 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS29450 PF13091 PLD-like domain PMA3_RS29465 PF00171 Aldehyde dehydrogenase family PMA3_RS29485 PF00471 Ribosomal protein L33 PMA3_RS29490 PF00830 Ribosomal L28 family PMA3_RS29495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PMA3_RS29500 PF04002 RadC-like JAB domain PMA3_RS29505 PF02441 Flavoprotein PMA3_RS29505 PF04127 DNA / pantothenate metabolism flavoprotein PMA3_RS29510 PF00692 dUTPase PMA3_RS29515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PMA3_RS29515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PMA3_RS29515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PMA3_RS29515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PMA3_RS29520 PF00696 Amino acid kinase family PMA3_RS29525 PF00156 Phosphoribosyl transferase domain PMA3_RS29530 PF03372 Endonuclease/Exonuclease/phosphatase family PMA3_RS29535 PF03616 Sodium/glutamate symporter PMA3_RS29545 PF03725 3' exoribonuclease family, domain 2 PMA3_RS29545 PF01138 3' exoribonuclease family, domain 1 PMA3_RS29550 PF03755 YicC-like family, N-terminal region PMA3_RS29550 PF08340 Domain of unknown function (DUF1732) PMA3_RS29555 PF00625 Guanylate kinase PMA3_RS29560 PF01192 RNA polymerase Rpb6 PMA3_RS29565 PF13291 ACT domain PMA3_RS29565 PF04607 Region found in RelA / SpoT proteins PMA3_RS29565 PF02824 TGS domain PMA3_RS29570 PF01042 Endoribonuclease L-PSP PMA3_RS29585 PF01618 MotA/TolQ/ExbB proton channel family PMA3_RS29590 PF02472 Biopolymer transport protein ExbD/TolR PMA3_RS29595 PF03544 Gram-negative bacterial TonB protein C-terminal PMA3_RS29600 PF03466 LysR substrate binding domain PMA3_RS29600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS29605 PF17191 RecG wedge domain PMA3_RS29605 PF00271 Helicase conserved C-terminal domain PMA3_RS29605 PF00270 DEAD/DEAH box helicase PMA3_RS29635 PF00216 Bacterial DNA-binding protein PMA3_RS29640 PF18113 Rubredoxin binding C-terminal domain PMA3_RS29640 PF07992 Pyridine nucleotide-disulphide oxidoreductase PMA3_RS29645 PF00301 Rubredoxin PMA3_RS29650 PF04345 Chorismate lyase PMA3_RS29655 PF01040 UbiA prenyltransferase family PMA3_RS29665 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS29665 PF00072 Response regulator receiver domain PMA3_RS29670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS29670 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS29670 PF11808 Phosphate regulon sensor protein PhoR PMA3_RS29670 PF00989 PAS fold PMA3_RS29675 PF00571 CBS domain PMA3_RS29675 PF03471 Transporter associated domain PMA3_RS29675 PF01595 Cyclin M transmembrane N-terminal domain PMA3_RS29680 PF01551 Peptidase family M23 PMA3_RS29685 PF00072 Response regulator receiver domain PMA3_RS29690 PF01895 PhoU domain PMA3_RS29695 PF00005 ABC transporter PMA3_RS29700 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS29705 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS29710 PF12849 PBP superfamily domain PMA3_RS29715 PF07690 Major Facilitator Superfamily PMA3_RS29720 PF03061 Thioesterase superfamily PMA3_RS29740 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PMA3_RS29740 PF02222 ATP-grasp domain PMA3_RS29745 PF00731 AIR carboxylase PMA3_RS29755 PF03466 LysR substrate binding domain PMA3_RS29755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS29760 PF00206 Lyase PMA3_RS29760 PF10415 Fumarase C C-terminus PMA3_RS29765 PF01235 Sodium:alanine symporter family PMA3_RS29770 PF17763 Glutaminase/Asparaginase C-terminal domain PMA3_RS29770 PF00710 Asparaginase, N-terminal PMA3_RS29775 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PMA3_RS29775 PF12833 Helix-turn-helix domain PMA3_RS29780 PF00850 Histone deacetylase domain PMA3_RS29785 PF13416 Bacterial extracellular solute-binding protein PMA3_RS29790 PF00155 Aminotransferase class I and II PMA3_RS29790 PF00392 Bacterial regulatory proteins, gntR family PMA3_RS29815 PF00497 Bacterial extracellular solute-binding proteins, family 3 PMA3_RS29820 PF00528 Binding-protein-dependent transport system inner membrane component PMA3_RS29825 PF02436 Conserved carboxylase domain PMA3_RS29825 PF00682 HMGL-like PMA3_RS29825 PF00364 Biotin-requiring enzyme PMA3_RS29830 PF02785 Biotin carboxylase C-terminal domain PMA3_RS29830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PMA3_RS29830 PF00289 Biotin carboxylase, N-terminal domain PMA3_RS29835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS29835 PF03466 LysR substrate binding domain PMA3_RS29840 PF01380 SIS domain PMA3_RS29840 PF01418 Helix-turn-helix domain, rpiR family PMA3_RS29845 PF00563 EAL domain PMA3_RS29845 PF03707 Bacterial signalling protein N terminal repeat PMA3_RS29845 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS29850 PF13361 UvrD-like helicase C-terminal domain PMA3_RS29850 PF00580 UvrD/REP helicase N-terminal domain PMA3_RS29865 PF02254 TrkA-N domain PMA3_RS29865 PF00999 Sodium/hydrogen exchanger family PMA3_RS29870 PF03061 Thioesterase superfamily PMA3_RS29875 PF08543 Phosphomethylpyrimidine kinase PMA3_RS29885 PF02492 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS29885 PF07683 Cobalamin synthesis protein cobW C-terminal domain PMA3_RS29900 PF02492 CobW/HypB/UreG, nucleotide-binding domain PMA3_RS29900 PF07683 Cobalamin synthesis protein cobW C-terminal domain PMA3_RS29910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PMA3_RS29910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PMA3_RS29910 PF03129 Anticodon binding domain PMA3_RS29910 PF02824 TGS domain PMA3_RS29910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PMA3_RS29910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PMA3_RS29910 PF03129 Anticodon binding domain PMA3_RS29910 PF02824 TGS domain PMA3_RS29915 PF12276 Protein of unknown function (DUF3617) PMA3_RS29920 PF13396 Phospholipase_D-nuclease N-terminal PMA3_RS29920 PF13091 PLD-like domain PMA3_RS29930 PF00403 Heavy-metal-associated domain PMA3_RS29950 PF01037 Lrp/AsnC ligand binding domain PMA3_RS29955 PF01810 LysE type translocator PMA3_RS29970 PF00175 Oxidoreductase NAD-binding domain PMA3_RS29970 PF00042 Globin PMA3_RS29970 PF00970 Oxidoreductase FAD-binding domain PMA3_RS29975 PF02798 Glutathione S-transferase, N-terminal domain PMA3_RS29980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS29980 PF03466 LysR substrate binding domain PMA3_RS29985 PF01380 SIS domain PMA3_RS29990 PF08220 DeoR-like helix-turn-helix domain PMA3_RS29990 PF00455 DeoR C terminal sensor domain PMA3_RS29995 PF12804 MobA-like NTP transferase domain PMA3_RS29995 PF14602 Hexapeptide repeat of succinyl-transferase PMA3_RS29995 PF00132 Bacterial transferase hexapeptide (six repeats) PMA3_RS30000 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PMA3_RS30000 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PMA3_RS30005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PMA3_RS30005 PF02874 ATP synthase alpha/beta family, beta-barrel domain PMA3_RS30010 PF00231 ATP synthase PMA3_RS30015 PF02874 ATP synthase alpha/beta family, beta-barrel domain PMA3_RS30015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PMA3_RS30015 PF00306 ATP synthase alpha/beta chain, C terminal domain PMA3_RS30020 PF00213 ATP synthase delta (OSCP) subunit PMA3_RS30025 PF00430 ATP synthase B/B' CF(0) PMA3_RS30030 PF00137 ATP synthase subunit C PMA3_RS30035 PF00119 ATP synthase A chain PMA3_RS30040 PF03899 ATP synthase I chain PMA3_RS30045 PF02195 ParB-like nuclease domain PMA3_RS30045 PF17762 HTH domain found in ParB protein PMA3_RS30050 PF13614 AAA domain PMA3_RS30055 PF02527 rRNA small subunit methyltransferase G PMA3_RS30060 PF01134 Glucose inhibited division protein A PMA3_RS30060 PF13932 GidA associated domain PMA3_RS30080 PF01926 50S ribosome-binding GTPase PMA3_RS30080 PF10396 GTP-binding protein TrmE N-terminus PMA3_RS30080 PF12631 MnmE helical domain PMA3_RS30085 PF02096 60Kd inner membrane protein PMA3_RS30085 PF14849 YidC periplasmic domain PMA3_RS30090 PF00825 Ribonuclease P PMA3_RS30095 PF08299 Bacterial dnaA protein helix-turn-helix PMA3_RS30095 PF00308 Bacterial dnaA protein PMA3_RS30095 PF11638 DnaA N-terminal domain PMA3_RS30100 PF02768 DNA polymerase III beta subunit, C-terminal domain PMA3_RS30100 PF00712 DNA polymerase III beta subunit, N-terminal domain PMA3_RS30100 PF02767 DNA polymerase III beta subunit, central domain PMA3_RS30105 PF02463 RecF/RecN/SMC N terminal domain PMA3_RS30110 PF00204 DNA gyrase B PMA3_RS30110 PF00986 DNA gyrase B subunit, carboxyl terminus PMA3_RS30110 PF18053 DNA gyrase B subunit insert domain PMA3_RS30110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS30110 PF01751 Toprim domain PMA3_RS30115 PF00486 Transcriptional regulatory protein, C terminal PMA3_RS30115 PF00072 Response regulator receiver domain PMA3_RS30120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS30120 PF00989 PAS fold PMA3_RS30120 PF16736 Single Cache-like PMA3_RS30120 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS30135 PF02092 Glycyl-tRNA synthetase beta subunit PMA3_RS30135 PF05746 DALR anticodon binding domain PMA3_RS30140 PF02091 Glycyl-tRNA synthetase alpha subunit PMA3_RS30145 PF03352 Methyladenine glycosylase PMA3_RS30160 PF02254 TrkA-N domain PMA3_RS30160 PF02080 TrkA-C domain PMA3_RS30165 PF01029 NusB family PMA3_RS30165 PF01189 16S rRNA methyltransferase RsmB/F PMA3_RS30170 PF02911 Formyl transferase, C-terminal domain PMA3_RS30170 PF00551 Formyl transferase PMA3_RS30175 PF01327 Polypeptide deformylase PMA3_RS30185 PF02481 DNA recombination-mediator protein A PMA3_RS30185 PF17782 DprA winged helix domain PMA3_RS30190 PF01300 Telomere recombination PMA3_RS30195 PF00107 Zinc-binding dehydrogenase PMA3_RS30195 PF08240 Alcohol dehydrogenase GroES-like domain PMA3_RS30200 PF01218 Coproporphyrinogen III oxidase PMA3_RS30205 PF08501 Shikimate dehydrogenase substrate binding domain PMA3_RS30205 PF01488 Shikimate / quinate 5-dehydrogenase PMA3_RS30205 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PMA3_RS30210 PF00916 Sulfate permease family PMA3_RS30210 PF01740 STAS domain PMA3_RS30215 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PMA3_RS30220 PF12411 Choline sulfatase enzyme C terminal PMA3_RS30220 PF00884 Sulfatase PMA3_RS30225 PF03466 LysR substrate binding domain PMA3_RS30225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PMA3_RS30245 PF03600 Citrate transporter PMA3_RS30250 PF03741 Integral membrane protein TerC family PMA3_RS30255 PF02690 Na+/Pi-cotransporter PMA3_RS30260 PF05193 Peptidase M16 inactive domain PMA3_RS30260 PF00675 Insulinase (Peptidase family M16) PMA3_RS30270 PF02405 Permease MlaE PMA3_RS30275 PF00005 ABC transporter PMA3_RS30290 PF07670 Nucleoside recognition PMA3_RS30295 PF00375 Sodium:dicarboxylate symporter family PMA3_RS30315 PF02954 Bacterial regulatory protein, Fis family PMA3_RS30315 PF00072 Response regulator receiver domain PMA3_RS30315 PF00158 Sigma-54 interaction domain PMA3_RS30320 PF00512 His Kinase A (phospho-acceptor) domain PMA3_RS30320 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB PMA3_RS30320 PF00672 HAMP domain PMA3_RS30320 PF08448 PAS fold PMA3_RS30320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PMA3_RS30325 PF00563 EAL domain PMA3_RS30325 PF12792 CSS motif domain associated with EAL PMA3_RS30330 PF01510 N-acetylmuramoyl-L-alanine amidase PMA3_RS30335 PF00990 Diguanylate cyclase, GGDEF domain PMA3_RS30345 PF01323 DSBA-like thioredoxin domain PMA3_RS30350 PF00034 Cytochrome c PMA3_RS30360 PF01926 50S ribosome-binding GTPase